Multiple sequence alignment - TraesCS5A01G407500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G407500 chr5A 100.000 5759 0 0 1 5759 598240892 598246650 0.000000e+00 10635.0
1 TraesCS5A01G407500 chr5A 86.523 512 28 17 4651 5131 598271972 598272473 5.110000e-145 525.0
2 TraesCS5A01G407500 chr5A 85.787 394 24 11 5229 5595 598272600 598272988 7.000000e-104 388.0
3 TraesCS5A01G407500 chr5B 95.340 2940 99 13 789 3715 587340581 587343495 0.000000e+00 4636.0
4 TraesCS5A01G407500 chr5B 83.344 1597 147 56 3883 5420 587343540 587345076 0.000000e+00 1365.0
5 TraesCS5A01G407500 chr5B 82.390 318 26 13 5424 5717 587345121 587345432 3.450000e-62 250.0
6 TraesCS5A01G407500 chr5B 85.714 217 20 5 1 214 587338021 587338229 9.720000e-53 219.0
7 TraesCS5A01G407500 chr5B 91.429 105 9 0 1 105 587339719 587339823 1.670000e-30 145.0
8 TraesCS5A01G407500 chr5B 78.539 219 27 14 586 790 587340327 587340539 6.060000e-25 126.0
9 TraesCS5A01G407500 chr5B 85.938 64 9 0 4292 4355 377845306 377845369 1.040000e-07 69.4
10 TraesCS5A01G407500 chr5D 95.154 2930 101 17 790 3704 479579580 479582483 0.000000e+00 4586.0
11 TraesCS5A01G407500 chr5D 84.993 1526 118 56 3932 5420 479582713 479584164 0.000000e+00 1447.0
12 TraesCS5A01G407500 chr5D 86.111 396 40 6 1 391 479578787 479579172 4.150000e-111 412.0
13 TraesCS5A01G407500 chr5D 84.751 341 36 7 5425 5751 479584207 479584545 1.550000e-85 327.0
14 TraesCS5A01G407500 chr5D 76.763 241 33 17 569 790 479579292 479579528 4.720000e-21 113.0
15 TraesCS5A01G407500 chr7D 72.947 950 223 31 1429 2359 618486696 618487630 3.370000e-77 300.0
16 TraesCS5A01G407500 chr1D 100.000 29 0 0 4685 4713 472394577 472394605 3.000000e-03 54.7
17 TraesCS5A01G407500 chr7B 100.000 28 0 0 1753 1780 480692315 480692342 1.000000e-02 52.8
18 TraesCS5A01G407500 chr7A 100.000 28 0 0 1753 1780 541385888 541385861 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G407500 chr5A 598240892 598246650 5758 False 10635.0 10635 100.0000 1 5759 1 chr5A.!!$F1 5758
1 TraesCS5A01G407500 chr5A 598271972 598272988 1016 False 456.5 525 86.1550 4651 5595 2 chr5A.!!$F2 944
2 TraesCS5A01G407500 chr5B 587338021 587345432 7411 False 1123.5 4636 86.1260 1 5717 6 chr5B.!!$F2 5716
3 TraesCS5A01G407500 chr5D 479578787 479584545 5758 False 1377.0 4586 85.5544 1 5751 5 chr5D.!!$F1 5750
4 TraesCS5A01G407500 chr7D 618486696 618487630 934 False 300.0 300 72.9470 1429 2359 1 chr7D.!!$F1 930

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
729 2585 0.034059 AAAGTGGCCGTGTCTCTGAG 59.966 55.000 0.00 0.0 0.00 3.35 F
793 2717 0.252193 CCCCAAAATCAGAAGCCCCA 60.252 55.000 0.00 0.0 0.00 4.96 F
979 2906 1.000486 CACCTCCCCCGAGAGAGAA 60.000 63.158 0.00 0.0 38.52 2.87 F
991 2918 1.000955 GAGAGAGAACGAGGCAAACCA 59.999 52.381 0.00 0.0 39.06 3.67 F
1856 3804 1.735376 ATACCGTACGAGCTGGGCAG 61.735 60.000 18.76 0.0 0.00 4.85 F
3222 5170 1.135094 ATGACCATGGATTCTCCGCT 58.865 50.000 21.47 0.0 40.17 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1782 3730 0.106708 TGTCGAGTTTCTGCAGCCTT 59.893 50.000 9.47 0.00 0.00 4.35 R
1929 3877 0.445436 GCAGCGTCATGTTCTTGAGG 59.555 55.000 0.00 4.72 35.22 3.86 R
2523 4471 1.815840 GCCGCTTAGGTCAGCCTTC 60.816 63.158 0.00 0.00 44.18 3.46 R
2535 4483 2.511373 TCGATCGCATTGCCGCTT 60.511 55.556 11.09 0.00 0.00 4.68 R
3330 5278 1.671901 GGAGAAGCTCCCCGAGACTG 61.672 65.000 1.97 0.00 44.36 3.51 R
4777 6912 0.237235 GAAGTCCGCATGTTTTCGCA 59.763 50.000 0.00 0.00 0.00 5.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.037327 GCAGATTTGCTTCTTTCCCCTATC 59.963 45.833 0.00 0.00 46.95 2.08
38 39 3.107642 CCTATCGGGAGTTGCGTAATT 57.892 47.619 0.00 0.00 37.23 1.40
47 51 5.235616 CGGGAGTTGCGTAATTATAATGTGT 59.764 40.000 0.00 0.00 0.00 3.72
76 80 3.357079 CGCAGGTGGTGGCTCAAC 61.357 66.667 0.00 0.00 0.00 3.18
207 211 7.761409 TCACAAGAATACATAAATTGTGCCTC 58.239 34.615 10.63 0.00 46.44 4.70
280 2087 4.881019 AGAATAGGACTTGATGGATCGG 57.119 45.455 0.00 0.00 0.00 4.18
346 2153 7.384358 GTTTTGGGAAACTATTGTAACGTTG 57.616 36.000 11.99 0.00 41.50 4.10
347 2154 5.692613 TTGGGAAACTATTGTAACGTTGG 57.307 39.130 11.99 0.00 0.00 3.77
376 2187 7.605691 ACAAAATGAGATGTTTACTCTCCTCAG 59.394 37.037 0.00 0.00 38.70 3.35
391 2202 0.605589 CTCAGAGGTTCTCGCTGGTT 59.394 55.000 0.00 0.00 42.47 3.67
392 2203 1.001406 CTCAGAGGTTCTCGCTGGTTT 59.999 52.381 0.00 0.00 42.47 3.27
393 2204 1.416401 TCAGAGGTTCTCGCTGGTTTT 59.584 47.619 0.00 0.00 42.47 2.43
394 2205 2.158813 TCAGAGGTTCTCGCTGGTTTTT 60.159 45.455 0.00 0.00 42.47 1.94
439 2250 8.443160 TCTCACAAAGCTTTATTCTGTAAATCG 58.557 33.333 12.25 0.00 0.00 3.34
441 2252 8.443160 TCACAAAGCTTTATTCTGTAAATCGAG 58.557 33.333 12.25 0.00 0.00 4.04
475 2292 2.492088 GCTCAAAATTCTTACCGGGCTT 59.508 45.455 6.32 0.00 0.00 4.35
506 2337 6.435430 TTCAAATACCATCGGAAATGACAG 57.565 37.500 0.00 0.00 0.00 3.51
513 2344 0.888619 TCGGAAATGACAGCTCTCGT 59.111 50.000 0.00 0.00 0.00 4.18
514 2345 0.994995 CGGAAATGACAGCTCTCGTG 59.005 55.000 0.00 0.00 0.00 4.35
515 2346 1.670087 CGGAAATGACAGCTCTCGTGT 60.670 52.381 0.00 0.00 0.00 4.49
516 2347 2.415491 CGGAAATGACAGCTCTCGTGTA 60.415 50.000 0.00 0.00 0.00 2.90
518 2349 2.656560 AATGACAGCTCTCGTGTACC 57.343 50.000 0.00 0.00 0.00 3.34
519 2350 1.545841 ATGACAGCTCTCGTGTACCA 58.454 50.000 0.00 0.00 0.00 3.25
520 2351 0.596577 TGACAGCTCTCGTGTACCAC 59.403 55.000 0.00 0.00 0.00 4.16
523 2354 0.388649 CAGCTCTCGTGTACCACCAC 60.389 60.000 0.00 0.00 0.00 4.16
524 2355 1.080025 GCTCTCGTGTACCACCACC 60.080 63.158 0.00 0.00 31.47 4.61
525 2356 1.812686 GCTCTCGTGTACCACCACCA 61.813 60.000 0.00 0.00 31.47 4.17
526 2357 0.038526 CTCTCGTGTACCACCACCAC 60.039 60.000 0.00 0.00 31.47 4.16
527 2358 1.005394 CTCGTGTACCACCACCACC 60.005 63.158 0.00 0.00 31.47 4.61
528 2359 1.750341 CTCGTGTACCACCACCACCA 61.750 60.000 0.00 0.00 31.47 4.17
529 2360 1.595929 CGTGTACCACCACCACCAC 60.596 63.158 0.00 0.00 31.47 4.16
530 2361 1.228033 GTGTACCACCACCACCACC 60.228 63.158 0.00 0.00 0.00 4.61
531 2362 1.693103 TGTACCACCACCACCACCA 60.693 57.895 0.00 0.00 0.00 4.17
532 2363 1.063070 TGTACCACCACCACCACCAT 61.063 55.000 0.00 0.00 0.00 3.55
533 2364 0.111639 GTACCACCACCACCACCATT 59.888 55.000 0.00 0.00 0.00 3.16
534 2365 0.111446 TACCACCACCACCACCATTG 59.889 55.000 0.00 0.00 0.00 2.82
535 2366 1.152567 CCACCACCACCACCATTGT 60.153 57.895 0.00 0.00 0.00 2.71
536 2367 1.178534 CCACCACCACCACCATTGTC 61.179 60.000 0.00 0.00 0.00 3.18
537 2368 0.178992 CACCACCACCACCATTGTCT 60.179 55.000 0.00 0.00 0.00 3.41
538 2369 0.110486 ACCACCACCACCATTGTCTC 59.890 55.000 0.00 0.00 0.00 3.36
539 2370 0.110295 CCACCACCACCATTGTCTCA 59.890 55.000 0.00 0.00 0.00 3.27
540 2371 1.478471 CCACCACCACCATTGTCTCAA 60.478 52.381 0.00 0.00 0.00 3.02
541 2372 2.305928 CACCACCACCATTGTCTCAAA 58.694 47.619 0.00 0.00 0.00 2.69
542 2373 2.692557 CACCACCACCATTGTCTCAAAA 59.307 45.455 0.00 0.00 0.00 2.44
543 2374 3.131933 CACCACCACCATTGTCTCAAAAA 59.868 43.478 0.00 0.00 0.00 1.94
564 2395 2.597995 AAAAACCCACCACCACCAC 58.402 52.632 0.00 0.00 0.00 4.16
565 2396 0.978667 AAAAACCCACCACCACCACC 60.979 55.000 0.00 0.00 0.00 4.61
566 2397 2.169590 AAAACCCACCACCACCACCA 62.170 55.000 0.00 0.00 0.00 4.17
567 2398 2.864770 AAACCCACCACCACCACCAC 62.865 60.000 0.00 0.00 0.00 4.16
568 2399 4.596585 CCCACCACCACCACCACC 62.597 72.222 0.00 0.00 0.00 4.61
569 2400 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
570 2401 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
571 2402 3.816090 ACCACCACCACCACCACC 61.816 66.667 0.00 0.00 0.00 4.61
572 2403 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
573 2404 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
574 2405 3.816090 ACCACCACCACCACCACC 61.816 66.667 0.00 0.00 0.00 4.61
575 2406 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
576 2407 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
577 2408 4.183858 ACCACCACCACCACCACG 62.184 66.667 0.00 0.00 0.00 4.94
578 2409 4.947147 CCACCACCACCACCACGG 62.947 72.222 0.00 0.00 42.50 4.94
579 2410 4.947147 CACCACCACCACCACGGG 62.947 72.222 0.00 0.00 40.22 5.28
581 2412 4.329545 CCACCACCACCACGGGAG 62.330 72.222 0.00 0.00 40.22 4.30
618 2466 3.347216 ACGAATCCTCCAACCAAATCAG 58.653 45.455 0.00 0.00 0.00 2.90
623 2471 1.542915 CCTCCAACCAAATCAGCACAG 59.457 52.381 0.00 0.00 0.00 3.66
631 2482 3.508793 ACCAAATCAGCACAGGAAATGAG 59.491 43.478 0.00 0.00 0.00 2.90
656 2512 9.357161 AGTATAGATTGTTCTCTACGAGGAAAT 57.643 33.333 0.00 0.00 36.91 2.17
657 2513 9.615295 GTATAGATTGTTCTCTACGAGGAAATC 57.385 37.037 0.00 0.00 33.17 2.17
668 2524 6.582636 TCTACGAGGAAATCACAGCATTATT 58.417 36.000 0.00 0.00 0.00 1.40
670 2526 8.367911 TCTACGAGGAAATCACAGCATTATTAT 58.632 33.333 0.00 0.00 0.00 1.28
672 2528 8.902540 ACGAGGAAATCACAGCATTATTATAA 57.097 30.769 0.00 0.00 0.00 0.98
673 2529 9.507329 ACGAGGAAATCACAGCATTATTATAAT 57.493 29.630 2.97 2.97 0.00 1.28
699 2555 8.496707 AAGAAACAGATTGAAAACAAAAGCAT 57.503 26.923 0.00 0.00 0.00 3.79
700 2556 8.496707 AGAAACAGATTGAAAACAAAAGCATT 57.503 26.923 0.00 0.00 0.00 3.56
701 2557 8.392612 AGAAACAGATTGAAAACAAAAGCATTG 58.607 29.630 1.14 1.14 0.00 2.82
702 2558 6.607735 ACAGATTGAAAACAAAAGCATTGG 57.392 33.333 7.12 0.00 0.00 3.16
725 2581 1.228657 GGTCAAAGTGGCCGTGTCTC 61.229 60.000 0.00 0.00 29.54 3.36
728 2584 0.249868 CAAAGTGGCCGTGTCTCTGA 60.250 55.000 0.00 0.00 0.00 3.27
729 2585 0.034059 AAAGTGGCCGTGTCTCTGAG 59.966 55.000 0.00 0.00 0.00 3.35
730 2586 2.433318 GTGGCCGTGTCTCTGAGC 60.433 66.667 0.00 0.00 0.00 4.26
732 2588 4.803426 GGCCGTGTCTCTGAGCCG 62.803 72.222 0.00 2.32 33.18 5.52
734 2590 3.753434 CCGTGTCTCTGAGCCGCT 61.753 66.667 0.00 0.00 0.00 5.52
735 2591 2.505777 CGTGTCTCTGAGCCGCTG 60.506 66.667 0.00 0.00 0.00 5.18
736 2592 2.813042 GTGTCTCTGAGCCGCTGC 60.813 66.667 0.00 0.00 37.95 5.25
761 2635 2.599973 CGAGACCACGTTATAAAACCCG 59.400 50.000 0.00 0.00 31.46 5.28
790 2664 2.165357 ATCCCCCAAAATCAGAAGCC 57.835 50.000 0.00 0.00 0.00 4.35
793 2717 0.252193 CCCCAAAATCAGAAGCCCCA 60.252 55.000 0.00 0.00 0.00 4.96
874 2798 3.435186 GTCCAAAGAGCCAGGCGC 61.435 66.667 7.17 7.17 37.98 6.53
910 2837 2.352032 CCGTCTCACACTCCCCCTC 61.352 68.421 0.00 0.00 0.00 4.30
912 2839 2.680352 TCTCACACTCCCCCTCGC 60.680 66.667 0.00 0.00 0.00 5.03
979 2906 1.000486 CACCTCCCCCGAGAGAGAA 60.000 63.158 0.00 0.00 38.52 2.87
983 2910 1.077644 TCCCCCGAGAGAGAACGAG 60.078 63.158 0.00 0.00 0.00 4.18
991 2918 1.000955 GAGAGAGAACGAGGCAAACCA 59.999 52.381 0.00 0.00 39.06 3.67
1041 2980 2.124693 GCTCCTCCTCCTCGTCCTG 61.125 68.421 0.00 0.00 0.00 3.86
1856 3804 1.735376 ATACCGTACGAGCTGGGCAG 61.735 60.000 18.76 0.00 0.00 4.85
1929 3877 4.821589 CCGCCGAGCTTCTCCCAC 62.822 72.222 0.00 0.00 0.00 4.61
2485 4433 3.119096 GCAACTCGTTCTCCGGCC 61.119 66.667 0.00 0.00 37.11 6.13
2556 4504 2.974698 GGCAATGCGATCGAGGGG 60.975 66.667 21.57 6.10 0.00 4.79
2979 4927 3.127030 GCTCCATTATATTTGCTACCGCC 59.873 47.826 0.00 0.00 34.43 6.13
3105 5053 6.240549 TCCCTGAAAGAGGAGAACATTATC 57.759 41.667 0.00 0.00 46.33 1.75
3207 5155 2.528743 CCGTGGCTCATCGCATGAC 61.529 63.158 0.00 0.00 41.67 3.06
3219 5167 1.202687 TCGCATGACCATGGATTCTCC 60.203 52.381 21.47 0.84 39.16 3.71
3222 5170 1.135094 ATGACCATGGATTCTCCGCT 58.865 50.000 21.47 0.00 40.17 5.52
3474 5422 2.102420 ACTTCACCGTGATGTCAAGTCA 59.898 45.455 12.98 0.00 30.10 3.41
3616 5564 6.267496 ACATTGCTCCAGGTATTAAAACAC 57.733 37.500 0.00 0.00 0.00 3.32
3619 5567 3.998341 TGCTCCAGGTATTAAAACACGTC 59.002 43.478 0.00 0.00 0.00 4.34
3623 5571 6.105397 TCCAGGTATTAAAACACGTCTTCT 57.895 37.500 0.00 0.00 0.00 2.85
3652 5600 4.974368 AGGTTCAGTCTGACTATTCTCG 57.026 45.455 10.47 0.00 0.00 4.04
3660 5608 5.752472 CAGTCTGACTATTCTCGAAATGCAT 59.248 40.000 10.47 0.00 0.00 3.96
3676 5624 9.777575 TCGAAATGCATATATAATGCTGATTTG 57.222 29.630 0.00 7.39 44.79 2.32
3677 5625 9.777575 CGAAATGCATATATAATGCTGATTTGA 57.222 29.630 0.00 0.00 44.79 2.69
3682 5630 9.457436 TGCATATATAATGCTGATTTGATGAGT 57.543 29.630 10.95 0.00 44.79 3.41
3692 5640 7.475015 TGCTGATTTGATGAGTACTTTAATGC 58.525 34.615 0.00 0.00 0.00 3.56
3693 5641 7.337689 TGCTGATTTGATGAGTACTTTAATGCT 59.662 33.333 0.00 0.00 0.00 3.79
3694 5642 8.186821 GCTGATTTGATGAGTACTTTAATGCTT 58.813 33.333 0.00 0.00 0.00 3.91
3695 5643 9.713740 CTGATTTGATGAGTACTTTAATGCTTC 57.286 33.333 0.00 0.00 0.00 3.86
3696 5644 9.453572 TGATTTGATGAGTACTTTAATGCTTCT 57.546 29.630 0.00 0.00 0.00 2.85
3699 5647 7.076842 TGATGAGTACTTTAATGCTTCTTGC 57.923 36.000 0.00 0.00 43.25 4.01
3712 5660 4.954092 GCTTCTTGCATAGTAAGCTTGT 57.046 40.909 9.86 0.00 40.87 3.16
3713 5661 5.302357 GCTTCTTGCATAGTAAGCTTGTT 57.698 39.130 9.86 0.00 40.87 2.83
3714 5662 6.422776 GCTTCTTGCATAGTAAGCTTGTTA 57.577 37.500 9.86 1.52 40.87 2.41
3715 5663 6.481984 GCTTCTTGCATAGTAAGCTTGTTAG 58.518 40.000 9.86 0.00 40.87 2.34
3716 5664 6.313905 GCTTCTTGCATAGTAAGCTTGTTAGA 59.686 38.462 9.86 0.00 40.87 2.10
3717 5665 7.148407 GCTTCTTGCATAGTAAGCTTGTTAGAA 60.148 37.037 9.86 5.40 40.87 2.10
3718 5666 8.615878 TTCTTGCATAGTAAGCTTGTTAGAAA 57.384 30.769 9.86 0.00 0.00 2.52
3719 5667 8.615878 TCTTGCATAGTAAGCTTGTTAGAAAA 57.384 30.769 9.86 0.00 0.00 2.29
3720 5668 8.504005 TCTTGCATAGTAAGCTTGTTAGAAAAC 58.496 33.333 9.86 0.00 36.07 2.43
3721 5669 7.979444 TGCATAGTAAGCTTGTTAGAAAACT 57.021 32.000 9.86 4.29 36.51 2.66
3722 5670 7.806690 TGCATAGTAAGCTTGTTAGAAAACTG 58.193 34.615 9.86 0.00 36.51 3.16
3723 5671 7.444183 TGCATAGTAAGCTTGTTAGAAAACTGT 59.556 33.333 9.86 0.00 36.51 3.55
3724 5672 8.932791 GCATAGTAAGCTTGTTAGAAAACTGTA 58.067 33.333 9.86 0.00 36.51 2.74
3730 5678 7.365840 AGCTTGTTAGAAAACTGTACTATGC 57.634 36.000 0.00 0.00 36.51 3.14
3731 5679 6.371825 AGCTTGTTAGAAAACTGTACTATGCC 59.628 38.462 0.00 0.00 36.51 4.40
3732 5680 6.403309 GCTTGTTAGAAAACTGTACTATGCCC 60.403 42.308 0.00 0.00 36.51 5.36
3733 5681 6.368779 TGTTAGAAAACTGTACTATGCCCT 57.631 37.500 0.00 0.00 36.51 5.19
3734 5682 7.484993 TGTTAGAAAACTGTACTATGCCCTA 57.515 36.000 0.00 0.00 36.51 3.53
3735 5683 7.909518 TGTTAGAAAACTGTACTATGCCCTAA 58.090 34.615 0.00 0.00 36.51 2.69
3736 5684 8.038944 TGTTAGAAAACTGTACTATGCCCTAAG 58.961 37.037 0.00 0.00 36.51 2.18
3737 5685 5.429130 AGAAAACTGTACTATGCCCTAAGC 58.571 41.667 0.00 0.00 44.14 3.09
3749 5697 3.831715 GCCCTAAGCAACTGTTTACTG 57.168 47.619 0.00 0.00 42.97 2.74
3750 5698 3.146847 GCCCTAAGCAACTGTTTACTGT 58.853 45.455 0.00 0.00 42.97 3.55
3751 5699 4.320870 GCCCTAAGCAACTGTTTACTGTA 58.679 43.478 0.00 0.00 42.97 2.74
3752 5700 4.153655 GCCCTAAGCAACTGTTTACTGTAC 59.846 45.833 0.00 0.00 42.97 2.90
3753 5701 5.548406 CCCTAAGCAACTGTTTACTGTACT 58.452 41.667 0.00 0.00 0.00 2.73
3754 5702 6.694447 CCCTAAGCAACTGTTTACTGTACTA 58.306 40.000 0.00 0.00 0.00 1.82
3755 5703 6.589139 CCCTAAGCAACTGTTTACTGTACTAC 59.411 42.308 0.00 0.00 0.00 2.73
3756 5704 7.376615 CCTAAGCAACTGTTTACTGTACTACT 58.623 38.462 0.00 0.00 0.00 2.57
3757 5705 7.328737 CCTAAGCAACTGTTTACTGTACTACTG 59.671 40.741 0.00 0.00 0.00 2.74
3758 5706 6.158023 AGCAACTGTTTACTGTACTACTGT 57.842 37.500 4.37 4.37 34.59 3.55
3759 5707 5.983720 AGCAACTGTTTACTGTACTACTGTG 59.016 40.000 8.58 7.66 32.45 3.66
3760 5708 5.981315 GCAACTGTTTACTGTACTACTGTGA 59.019 40.000 8.58 0.00 32.45 3.58
3761 5709 6.074463 GCAACTGTTTACTGTACTACTGTGAC 60.074 42.308 8.58 7.79 32.45 3.67
3762 5710 6.956202 ACTGTTTACTGTACTACTGTGACT 57.044 37.500 8.58 0.00 32.45 3.41
3763 5711 7.344095 ACTGTTTACTGTACTACTGTGACTT 57.656 36.000 8.58 0.00 32.45 3.01
3764 5712 7.779073 ACTGTTTACTGTACTACTGTGACTTT 58.221 34.615 8.58 0.00 32.45 2.66
3765 5713 7.919621 ACTGTTTACTGTACTACTGTGACTTTC 59.080 37.037 8.58 0.00 32.45 2.62
3766 5714 7.774134 TGTTTACTGTACTACTGTGACTTTCA 58.226 34.615 8.58 0.00 32.45 2.69
3778 5726 4.802876 GTGACTTTCACTTCAGACTTGG 57.197 45.455 0.00 0.00 43.73 3.61
3779 5727 4.192317 GTGACTTTCACTTCAGACTTGGT 58.808 43.478 0.00 0.00 43.73 3.67
3780 5728 5.357257 GTGACTTTCACTTCAGACTTGGTA 58.643 41.667 0.00 0.00 43.73 3.25
3781 5729 5.463724 GTGACTTTCACTTCAGACTTGGTAG 59.536 44.000 0.00 0.00 43.73 3.18
3782 5730 5.128827 TGACTTTCACTTCAGACTTGGTAGT 59.871 40.000 0.00 0.00 37.31 2.73
3783 5731 5.990668 ACTTTCACTTCAGACTTGGTAGTT 58.009 37.500 0.00 0.00 33.84 2.24
3784 5732 5.817816 ACTTTCACTTCAGACTTGGTAGTTG 59.182 40.000 0.00 0.00 33.84 3.16
3785 5733 5.353394 TTCACTTCAGACTTGGTAGTTGT 57.647 39.130 0.00 0.00 33.84 3.32
3786 5734 5.353394 TCACTTCAGACTTGGTAGTTGTT 57.647 39.130 0.00 0.00 33.84 2.83
3787 5735 5.741011 TCACTTCAGACTTGGTAGTTGTTT 58.259 37.500 0.00 0.00 33.84 2.83
3788 5736 5.815740 TCACTTCAGACTTGGTAGTTGTTTC 59.184 40.000 0.00 0.00 33.84 2.78
3789 5737 4.809426 ACTTCAGACTTGGTAGTTGTTTCG 59.191 41.667 0.00 0.00 33.84 3.46
3790 5738 4.659111 TCAGACTTGGTAGTTGTTTCGA 57.341 40.909 0.00 0.00 33.84 3.71
3791 5739 5.209818 TCAGACTTGGTAGTTGTTTCGAT 57.790 39.130 0.00 0.00 33.84 3.59
3792 5740 4.988540 TCAGACTTGGTAGTTGTTTCGATG 59.011 41.667 0.00 0.00 33.84 3.84
3793 5741 4.988540 CAGACTTGGTAGTTGTTTCGATGA 59.011 41.667 0.00 0.00 33.84 2.92
3794 5742 5.119279 CAGACTTGGTAGTTGTTTCGATGAG 59.881 44.000 0.00 0.00 33.84 2.90
3795 5743 4.315803 ACTTGGTAGTTGTTTCGATGAGG 58.684 43.478 0.00 0.00 0.00 3.86
3804 5752 7.133891 AGTTGTTTCGATGAGGACTTTAATG 57.866 36.000 0.00 0.00 0.00 1.90
3808 5756 6.128282 TGTTTCGATGAGGACTTTAATGCTTC 60.128 38.462 0.00 0.00 0.00 3.86
3825 5773 4.284378 GCTTCTTGCATAGGCTTGTTAG 57.716 45.455 0.00 0.00 42.31 2.34
3828 5776 5.106157 GCTTCTTGCATAGGCTTGTTAGAAA 60.106 40.000 0.00 0.00 42.31 2.52
3830 5778 6.254281 TCTTGCATAGGCTTGTTAGAAAAC 57.746 37.500 0.00 0.00 41.91 2.43
3834 5782 6.234920 TGCATAGGCTTGTTAGAAAACTGTA 58.765 36.000 0.00 0.00 41.91 2.74
3836 5784 6.403309 GCATAGGCTTGTTAGAAAACTGTACC 60.403 42.308 0.00 0.00 35.25 3.34
3837 5785 5.043737 AGGCTTGTTAGAAAACTGTACCA 57.956 39.130 0.00 0.00 36.51 3.25
3839 5787 5.473504 AGGCTTGTTAGAAAACTGTACCATG 59.526 40.000 0.00 0.00 36.51 3.66
3840 5788 5.154222 GCTTGTTAGAAAACTGTACCATGC 58.846 41.667 0.00 0.00 36.51 4.06
3841 5789 5.699097 TTGTTAGAAAACTGTACCATGCC 57.301 39.130 0.00 0.00 36.51 4.40
3842 5790 3.749088 TGTTAGAAAACTGTACCATGCCG 59.251 43.478 0.00 0.00 36.51 5.69
3843 5791 2.561478 AGAAAACTGTACCATGCCGT 57.439 45.000 0.00 0.00 0.00 5.68
3844 5792 3.688694 AGAAAACTGTACCATGCCGTA 57.311 42.857 0.00 0.00 0.00 4.02
3845 5793 4.010667 AGAAAACTGTACCATGCCGTAA 57.989 40.909 0.00 0.00 0.00 3.18
3849 5797 3.128852 ACTGTACCATGCCGTAAACAA 57.871 42.857 0.00 0.00 0.00 2.83
3850 5798 2.809696 ACTGTACCATGCCGTAAACAAC 59.190 45.455 0.00 0.00 0.00 3.32
3851 5799 3.071479 CTGTACCATGCCGTAAACAACT 58.929 45.455 0.00 0.00 0.00 3.16
3852 5800 2.809119 TGTACCATGCCGTAAACAACTG 59.191 45.455 0.00 0.00 0.00 3.16
3853 5801 1.975660 ACCATGCCGTAAACAACTGT 58.024 45.000 0.00 0.00 0.00 3.55
3854 5802 2.303175 ACCATGCCGTAAACAACTGTT 58.697 42.857 0.00 0.00 40.50 3.16
3856 5804 3.884091 ACCATGCCGTAAACAACTGTTTA 59.116 39.130 10.31 10.31 45.47 2.01
3874 5822 9.609346 AACTGTTTACTGTACTGTTATGACTTT 57.391 29.630 10.89 0.00 36.37 2.66
3875 5823 9.257651 ACTGTTTACTGTACTGTTATGACTTTC 57.742 33.333 10.89 0.00 0.00 2.62
3876 5824 9.256477 CTGTTTACTGTACTGTTATGACTTTCA 57.744 33.333 10.89 0.00 0.00 2.69
3877 5825 9.037737 TGTTTACTGTACTGTTATGACTTTCAC 57.962 33.333 10.89 0.00 0.00 3.18
3878 5826 9.257651 GTTTACTGTACTGTTATGACTTTCACT 57.742 33.333 10.89 0.00 0.00 3.41
3879 5827 9.826574 TTTACTGTACTGTTATGACTTTCACTT 57.173 29.630 10.89 0.00 0.00 3.16
3880 5828 7.948278 ACTGTACTGTTATGACTTTCACTTC 57.052 36.000 0.00 0.00 0.00 3.01
3881 5829 7.497595 ACTGTACTGTTATGACTTTCACTTCA 58.502 34.615 0.00 0.00 0.00 3.02
3882 5830 7.653713 ACTGTACTGTTATGACTTTCACTTCAG 59.346 37.037 0.00 0.00 31.61 3.02
3884 5832 7.652105 TGTACTGTTATGACTTTCACTTCAGAC 59.348 37.037 0.00 0.00 30.67 3.51
3886 5834 7.275920 ACTGTTATGACTTTCACTTCAGACTT 58.724 34.615 0.00 0.00 30.67 3.01
3887 5835 7.225538 ACTGTTATGACTTTCACTTCAGACTTG 59.774 37.037 0.00 0.00 30.67 3.16
3888 5836 6.483307 TGTTATGACTTTCACTTCAGACTTGG 59.517 38.462 0.00 0.00 0.00 3.61
3889 5837 4.487714 TGACTTTCACTTCAGACTTGGT 57.512 40.909 0.00 0.00 0.00 3.67
3890 5838 5.607939 TGACTTTCACTTCAGACTTGGTA 57.392 39.130 0.00 0.00 0.00 3.25
3891 5839 5.601662 TGACTTTCACTTCAGACTTGGTAG 58.398 41.667 0.00 0.00 0.00 3.18
3892 5840 4.381411 ACTTTCACTTCAGACTTGGTAGC 58.619 43.478 0.00 0.00 0.00 3.58
3909 6036 7.448469 ACTTGGTAGCTGTTTTGATGAGTATTT 59.552 33.333 0.00 0.00 0.00 1.40
3926 6053 7.161404 TGAGTATTTCAATGCTTACTGACACT 58.839 34.615 0.00 0.00 31.23 3.55
3946 6073 7.062749 ACACTGGTCAAGTTATGAGAGTTTA 57.937 36.000 0.00 0.00 39.19 2.01
3949 6076 7.329717 CACTGGTCAAGTTATGAGAGTTTACTC 59.670 40.741 1.59 1.59 39.19 2.59
3954 6081 7.332182 GTCAAGTTATGAGAGTTTACTCCCAAG 59.668 40.741 6.28 0.00 43.88 3.61
3955 6082 5.735766 AGTTATGAGAGTTTACTCCCAAGC 58.264 41.667 6.28 0.00 43.88 4.01
3958 6085 1.628846 GAGAGTTTACTCCCAAGCCCA 59.371 52.381 6.28 0.00 43.88 5.36
3960 6087 2.160205 GAGTTTACTCCCAAGCCCAAC 58.840 52.381 0.00 0.00 37.02 3.77
3961 6088 1.203013 AGTTTACTCCCAAGCCCAACC 60.203 52.381 0.00 0.00 0.00 3.77
3962 6089 0.854218 TTTACTCCCAAGCCCAACCA 59.146 50.000 0.00 0.00 0.00 3.67
3963 6090 1.080638 TTACTCCCAAGCCCAACCAT 58.919 50.000 0.00 0.00 0.00 3.55
3964 6091 0.331278 TACTCCCAAGCCCAACCATG 59.669 55.000 0.00 0.00 0.00 3.66
3965 6092 2.283821 TCCCAAGCCCAACCATGC 60.284 61.111 0.00 0.00 0.00 4.06
3966 6093 2.604079 CCCAAGCCCAACCATGCA 60.604 61.111 0.00 0.00 0.00 3.96
3968 6095 1.753470 CCAAGCCCAACCATGCAAA 59.247 52.632 0.00 0.00 0.00 3.68
3969 6096 0.325602 CCAAGCCCAACCATGCAAAT 59.674 50.000 0.00 0.00 0.00 2.32
3989 6116 9.123902 TGCAAATTGCTATCAAGATGTAGTTAT 57.876 29.630 19.34 0.00 45.31 1.89
4011 6138 6.575162 ATTAAAACTTGAAACATCGAGGCT 57.425 33.333 0.00 0.00 0.00 4.58
4018 6145 4.488126 TGAAACATCGAGGCTTTCTTTG 57.512 40.909 18.68 2.12 0.00 2.77
4022 6149 5.712152 AACATCGAGGCTTTCTTTGATTT 57.288 34.783 0.00 0.00 0.00 2.17
4025 6152 5.010012 ACATCGAGGCTTTCTTTGATTTGTT 59.990 36.000 0.00 0.00 0.00 2.83
4034 6161 7.439056 GGCTTTCTTTGATTTGTTCTGAATGAA 59.561 33.333 0.00 0.00 0.00 2.57
4048 6175 9.567776 TGTTCTGAATGAAATCTGTAAACCTAA 57.432 29.630 0.00 0.00 36.30 2.69
4053 6180 6.980051 ATGAAATCTGTAAACCTAACGTCC 57.020 37.500 0.00 0.00 0.00 4.79
4057 6185 4.961438 TCTGTAAACCTAACGTCCCTTT 57.039 40.909 0.00 0.00 0.00 3.11
4079 6207 7.094762 CCTTTTTAGAACCACCTCATTACAGTC 60.095 40.741 0.00 0.00 0.00 3.51
4116 6251 4.811969 TTTGATTCATGAAAGCTGGCAT 57.188 36.364 13.09 0.00 0.00 4.40
4120 6255 2.519771 TCATGAAAGCTGGCATTCCT 57.480 45.000 7.85 0.00 0.00 3.36
4123 6258 1.999648 TGAAAGCTGGCATTCCTTGT 58.000 45.000 7.85 0.00 0.00 3.16
4124 6259 1.614903 TGAAAGCTGGCATTCCTTGTG 59.385 47.619 7.85 0.00 0.00 3.33
4125 6260 1.615392 GAAAGCTGGCATTCCTTGTGT 59.385 47.619 0.00 0.00 0.00 3.72
4126 6261 2.584835 AAGCTGGCATTCCTTGTGTA 57.415 45.000 0.00 0.00 0.00 2.90
4163 6298 9.612620 GGTTCAGTTACTTCAATTCTATGTTTG 57.387 33.333 0.00 0.00 0.00 2.93
4165 6300 8.389779 TCAGTTACTTCAATTCTATGTTTGCA 57.610 30.769 0.00 0.00 0.00 4.08
4166 6301 8.289618 TCAGTTACTTCAATTCTATGTTTGCAC 58.710 33.333 0.00 0.00 0.00 4.57
4167 6302 8.292448 CAGTTACTTCAATTCTATGTTTGCACT 58.708 33.333 0.00 0.00 0.00 4.40
4168 6303 8.507249 AGTTACTTCAATTCTATGTTTGCACTC 58.493 33.333 0.00 0.00 0.00 3.51
4169 6304 8.507249 GTTACTTCAATTCTATGTTTGCACTCT 58.493 33.333 0.00 0.00 0.00 3.24
4171 6306 7.588512 ACTTCAATTCTATGTTTGCACTCTTC 58.411 34.615 0.00 0.00 0.00 2.87
4182 6317 4.818534 TTGCACTCTTCACTTGATGTTC 57.181 40.909 0.00 0.00 0.00 3.18
4197 6332 2.949177 TGTTCCTCTAGCTGCCAAAA 57.051 45.000 0.00 0.00 0.00 2.44
4314 6449 0.179134 GCGATGTCTACAGCTTCGGT 60.179 55.000 4.10 0.00 35.14 4.69
4323 6458 2.031163 AGCTTCGGTGTGGTGCTC 59.969 61.111 0.00 0.00 0.00 4.26
4403 6538 3.117745 TCCAGTGGGTCAAGATGATGAT 58.882 45.455 9.92 0.00 34.93 2.45
4404 6539 3.118149 TCCAGTGGGTCAAGATGATGATG 60.118 47.826 9.92 0.00 34.93 3.07
4422 6557 2.278330 GGGCCCAAACAAGGAGCAG 61.278 63.158 19.95 0.00 0.00 4.24
4595 6730 1.880819 GCTGCCAACCAAGGTGATGG 61.881 60.000 5.73 5.73 46.38 3.51
4597 6732 0.251297 TGCCAACCAAGGTGATGGAG 60.251 55.000 12.99 0.00 43.54 3.86
4598 6733 0.038166 GCCAACCAAGGTGATGGAGA 59.962 55.000 12.99 0.00 43.54 3.71
4599 6734 1.952367 GCCAACCAAGGTGATGGAGAG 60.952 57.143 12.99 0.00 43.54 3.20
4639 6774 1.610624 GCGAAGGACCTGAATCCAACA 60.611 52.381 0.00 0.00 41.73 3.33
4647 6782 1.004044 CCTGAATCCAACACTCCTGCT 59.996 52.381 0.00 0.00 0.00 4.24
4662 6797 0.109342 CTGCTCCAACCAGTTCCACT 59.891 55.000 0.00 0.00 0.00 4.00
4674 6809 1.901948 TTCCACTGACGCTCCGACT 60.902 57.895 0.00 0.00 0.00 4.18
4692 6827 1.148157 CTGGCGACGCGAAAGATCAT 61.148 55.000 15.93 0.00 0.00 2.45
4695 6830 0.855349 GCGACGCGAAAGATCATCAT 59.145 50.000 15.93 0.00 0.00 2.45
4697 6832 2.119457 CGACGCGAAAGATCATCATCA 58.881 47.619 15.93 0.00 0.00 3.07
4698 6833 2.728318 CGACGCGAAAGATCATCATCAT 59.272 45.455 15.93 0.00 0.00 2.45
4699 6834 3.181546 CGACGCGAAAGATCATCATCATC 60.182 47.826 15.93 0.00 0.00 2.92
4700 6835 3.721035 ACGCGAAAGATCATCATCATCA 58.279 40.909 15.93 0.00 0.00 3.07
4774 6909 4.325119 CATCTGATCATCCAAGTCCATCC 58.675 47.826 0.00 0.00 0.00 3.51
4776 6911 2.103771 CTGATCATCCAAGTCCATCCGT 59.896 50.000 0.00 0.00 0.00 4.69
4777 6912 2.505407 TGATCATCCAAGTCCATCCGTT 59.495 45.455 0.00 0.00 0.00 4.44
4778 6913 2.401583 TCATCCAAGTCCATCCGTTG 57.598 50.000 0.00 0.00 0.00 4.10
4792 6941 1.082431 CGTTGCGAAAACATGCGGA 60.082 52.632 0.00 0.00 0.00 5.54
4812 6962 0.371645 CTTCTTCGATCGTGCAAGCC 59.628 55.000 15.94 0.00 0.00 4.35
4842 6996 4.282449 TGAATCTAGGGTTCGTTGAGTGAA 59.718 41.667 0.00 0.00 0.00 3.18
4849 7003 3.002348 GGGTTCGTTGAGTGAAAGACTTG 59.998 47.826 0.00 0.00 33.83 3.16
4850 7004 3.621715 GGTTCGTTGAGTGAAAGACTTGT 59.378 43.478 0.00 0.00 33.83 3.16
4852 7006 4.857871 TCGTTGAGTGAAAGACTTGTTG 57.142 40.909 0.00 0.00 33.83 3.33
5015 7185 4.695455 TCTTTCCTTGTGCAATGTAGTAGC 59.305 41.667 0.00 0.00 0.00 3.58
5063 7235 3.507162 TCAATGTCAAGCTCCTTTCCA 57.493 42.857 0.00 0.00 0.00 3.53
5066 7238 2.260844 TGTCAAGCTCCTTTCCAGTG 57.739 50.000 0.00 0.00 0.00 3.66
5067 7239 1.490490 TGTCAAGCTCCTTTCCAGTGT 59.510 47.619 0.00 0.00 0.00 3.55
5068 7240 2.147150 GTCAAGCTCCTTTCCAGTGTC 58.853 52.381 0.00 0.00 0.00 3.67
5069 7241 1.072331 TCAAGCTCCTTTCCAGTGTCC 59.928 52.381 0.00 0.00 0.00 4.02
5070 7242 1.140312 AAGCTCCTTTCCAGTGTCCA 58.860 50.000 0.00 0.00 0.00 4.02
5119 7297 5.867903 AAATCTTTGTTGTGGAACCATGA 57.132 34.783 0.00 0.00 34.36 3.07
5134 7321 5.163612 GGAACCATGATCCTCTTTAAAGTGC 60.164 44.000 14.74 1.54 33.98 4.40
5137 7324 4.578105 CCATGATCCTCTTTAAAGTGCCTC 59.422 45.833 14.74 11.22 0.00 4.70
5138 7325 3.861840 TGATCCTCTTTAAAGTGCCTCG 58.138 45.455 14.74 0.83 0.00 4.63
5148 7335 2.550830 AAGTGCCTCGTGTTGATCTT 57.449 45.000 0.00 0.00 0.00 2.40
5161 7348 7.537715 TCGTGTTGATCTTCAAATATTTGCAT 58.462 30.769 21.15 13.21 38.22 3.96
5163 7350 8.105742 CGTGTTGATCTTCAAATATTTGCATTG 58.894 33.333 21.15 11.58 38.22 2.82
5167 7354 9.491675 TTGATCTTCAAATATTTGCATTGTTGT 57.508 25.926 21.15 4.04 38.05 3.32
5171 7358 9.409312 TCTTCAAATATTTGCATTGTTGTAGTG 57.591 29.630 21.15 0.00 38.05 2.74
5184 7371 0.817654 TGTAGTGGGCTCGTCTCATG 59.182 55.000 0.00 0.00 0.00 3.07
5192 7379 1.634702 GCTCGTCTCATGTCCAGTTC 58.365 55.000 0.00 0.00 0.00 3.01
5199 7386 4.367450 GTCTCATGTCCAGTTCTCATAGC 58.633 47.826 0.00 0.00 0.00 2.97
5200 7387 4.026052 TCTCATGTCCAGTTCTCATAGCA 58.974 43.478 0.00 0.00 0.00 3.49
5201 7388 4.467438 TCTCATGTCCAGTTCTCATAGCAA 59.533 41.667 0.00 0.00 0.00 3.91
5202 7389 4.763073 TCATGTCCAGTTCTCATAGCAAG 58.237 43.478 0.00 0.00 0.00 4.01
5203 7390 4.467438 TCATGTCCAGTTCTCATAGCAAGA 59.533 41.667 0.00 0.00 0.00 3.02
5204 7391 4.462508 TGTCCAGTTCTCATAGCAAGAG 57.537 45.455 0.00 0.00 34.42 2.85
5205 7392 3.834813 TGTCCAGTTCTCATAGCAAGAGT 59.165 43.478 0.00 0.00 34.73 3.24
5206 7393 5.016831 TGTCCAGTTCTCATAGCAAGAGTA 58.983 41.667 0.00 0.00 34.73 2.59
5207 7394 5.126222 TGTCCAGTTCTCATAGCAAGAGTAG 59.874 44.000 0.00 0.00 34.73 2.57
5208 7395 5.126384 GTCCAGTTCTCATAGCAAGAGTAGT 59.874 44.000 0.00 0.00 34.73 2.73
5209 7396 6.319152 GTCCAGTTCTCATAGCAAGAGTAGTA 59.681 42.308 0.00 0.00 34.73 1.82
5210 7397 6.319152 TCCAGTTCTCATAGCAAGAGTAGTAC 59.681 42.308 0.00 0.00 34.73 2.73
5211 7398 6.460399 CCAGTTCTCATAGCAAGAGTAGTACC 60.460 46.154 0.00 0.00 34.73 3.34
5212 7399 6.095580 CAGTTCTCATAGCAAGAGTAGTACCA 59.904 42.308 0.00 0.00 34.73 3.25
5213 7400 6.095720 AGTTCTCATAGCAAGAGTAGTACCAC 59.904 42.308 0.00 0.00 34.73 4.16
5214 7401 4.888239 TCTCATAGCAAGAGTAGTACCACC 59.112 45.833 0.00 0.00 34.73 4.61
5215 7402 4.606210 TCATAGCAAGAGTAGTACCACCA 58.394 43.478 0.00 0.00 0.00 4.17
5218 7429 4.207891 AGCAAGAGTAGTACCACCATTG 57.792 45.455 0.00 0.00 0.00 2.82
5224 7435 3.104512 AGTAGTACCACCATTGCTGCTA 58.895 45.455 0.00 0.00 0.00 3.49
5225 7436 3.517901 AGTAGTACCACCATTGCTGCTAA 59.482 43.478 0.00 0.00 0.00 3.09
5227 7438 2.039746 AGTACCACCATTGCTGCTAACA 59.960 45.455 0.00 0.00 0.00 2.41
5246 7457 7.068341 GCTAACAGAGAAAGATGATAATTGCG 58.932 38.462 0.00 0.00 0.00 4.85
5281 7493 1.539388 TGCCAAAGCGTTCGATTGATT 59.461 42.857 10.87 0.00 44.31 2.57
5282 7494 1.913403 GCCAAAGCGTTCGATTGATTG 59.087 47.619 10.87 1.17 0.00 2.67
5283 7495 2.414029 GCCAAAGCGTTCGATTGATTGA 60.414 45.455 10.87 0.00 0.00 2.57
5284 7496 3.731867 GCCAAAGCGTTCGATTGATTGAT 60.732 43.478 10.87 0.00 0.00 2.57
5307 7519 1.412343 TGCTCCCTTTTTGACTTTGCC 59.588 47.619 0.00 0.00 0.00 4.52
5327 7539 2.971660 TGACGTTCAGAGACAACCAA 57.028 45.000 0.00 0.00 0.00 3.67
5328 7540 3.254470 TGACGTTCAGAGACAACCAAA 57.746 42.857 0.00 0.00 0.00 3.28
5329 7541 3.194861 TGACGTTCAGAGACAACCAAAG 58.805 45.455 0.00 0.00 0.00 2.77
5420 7665 0.388659 GGCAGCGTCTGATCTGATCT 59.611 55.000 17.82 3.94 32.44 2.75
5448 7731 2.028420 TGTCAGATAATGCGCTGCTT 57.972 45.000 9.73 2.04 32.27 3.91
5470 7753 2.108776 TGAGGCCCCATCTAATCCAATG 59.891 50.000 0.00 0.00 0.00 2.82
5471 7754 2.376518 GAGGCCCCATCTAATCCAATGA 59.623 50.000 0.00 0.00 0.00 2.57
5472 7755 2.998910 AGGCCCCATCTAATCCAATGAT 59.001 45.455 0.00 0.00 0.00 2.45
5473 7756 3.094572 GGCCCCATCTAATCCAATGATG 58.905 50.000 0.00 0.00 37.79 3.07
5474 7757 3.245371 GGCCCCATCTAATCCAATGATGA 60.245 47.826 0.00 0.00 39.72 2.92
5475 7758 4.571362 GGCCCCATCTAATCCAATGATGAT 60.571 45.833 0.00 0.00 39.72 2.45
5476 7759 4.643784 GCCCCATCTAATCCAATGATGATC 59.356 45.833 0.00 0.00 39.72 2.92
5648 7973 0.966370 CCTCTCCCTCGTTTCCTCGT 60.966 60.000 0.00 0.00 0.00 4.18
5670 7995 3.508426 TCCCCTGATCTGATCTGATCTG 58.492 50.000 30.92 29.39 42.30 2.90
5681 8006 5.769162 TCTGATCTGATCTGATCTACACTGG 59.231 44.000 30.92 17.43 42.30 4.00
5693 8018 0.887387 TACACTGGTTTTGCTCCGGC 60.887 55.000 0.00 0.00 34.93 6.13
5696 8021 4.947147 TGGTTTTGCTCCGGCGCT 62.947 61.111 18.73 0.00 42.25 5.92
5697 8022 3.670377 GGTTTTGCTCCGGCGCTT 61.670 61.111 18.73 0.00 42.25 4.68
5698 8023 2.335011 GTTTTGCTCCGGCGCTTT 59.665 55.556 18.73 0.00 42.25 3.51
5699 8024 1.299850 GTTTTGCTCCGGCGCTTTT 60.300 52.632 18.73 0.00 42.25 2.27
5701 8026 2.725275 TTTTGCTCCGGCGCTTTTCG 62.725 55.000 18.73 1.19 42.25 3.46
5723 8048 1.357761 ACGGAAAATCAATCCAGGGGT 59.642 47.619 0.00 0.00 36.74 4.95
5727 8052 2.128771 AAATCAATCCAGGGGTGTCG 57.871 50.000 0.00 0.00 0.00 4.35
5730 8055 0.830648 TCAATCCAGGGGTGTCGATC 59.169 55.000 0.00 0.00 0.00 3.69
5737 8062 0.531200 AGGGGTGTCGATCGAGTTTC 59.469 55.000 20.09 7.32 0.00 2.78
5739 8064 1.067071 GGGGTGTCGATCGAGTTTCTT 60.067 52.381 20.09 0.00 0.00 2.52
5740 8065 2.260481 GGGTGTCGATCGAGTTTCTTC 58.740 52.381 20.09 5.31 0.00 2.87
5746 8071 3.779758 GTCGATCGAGTTTCTTCACGTAG 59.220 47.826 20.09 0.00 0.00 3.51
5758 8083 2.048503 ACGTAGCGTGAACTGCCC 60.049 61.111 0.00 0.00 39.18 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.235616 ACACATTATAATTACGCAACTCCCG 59.764 40.000 0.00 0.00 0.00 5.14
33 34 6.482308 AGAGAACCGCCACACATTATAATTAC 59.518 38.462 0.00 0.00 0.00 1.89
38 39 3.490249 CGAGAGAACCGCCACACATTATA 60.490 47.826 0.00 0.00 0.00 0.98
76 80 5.698832 TCCTGTTTTTGATAAACATGCTCG 58.301 37.500 1.83 0.00 39.16 5.03
167 171 9.161684 GTATTCTTGTGAACGTCGTTAAATTTT 57.838 29.630 11.26 0.00 34.71 1.82
168 172 8.336806 TGTATTCTTGTGAACGTCGTTAAATTT 58.663 29.630 11.26 0.00 34.71 1.82
169 173 7.853524 TGTATTCTTGTGAACGTCGTTAAATT 58.146 30.769 11.26 0.00 34.71 1.82
170 174 7.410800 TGTATTCTTGTGAACGTCGTTAAAT 57.589 32.000 11.26 6.99 34.71 1.40
171 175 6.825284 TGTATTCTTGTGAACGTCGTTAAA 57.175 33.333 11.26 5.50 34.71 1.52
176 180 7.955324 ACAATTTATGTATTCTTGTGAACGTCG 59.045 33.333 0.00 0.00 41.63 5.12
303 2110 9.083080 CCCAAAACTTTTCACAAAAACTACTAG 57.917 33.333 0.00 0.00 31.23 2.57
308 2115 7.644490 GTTTCCCAAAACTTTTCACAAAAACT 58.356 30.769 0.00 0.00 41.32 2.66
325 2132 4.519730 CCCAACGTTACAATAGTTTCCCAA 59.480 41.667 0.00 0.00 0.00 4.12
326 2133 4.073549 CCCAACGTTACAATAGTTTCCCA 58.926 43.478 0.00 0.00 0.00 4.37
327 2134 4.325972 TCCCAACGTTACAATAGTTTCCC 58.674 43.478 0.00 0.00 0.00 3.97
334 2141 7.228906 TCTCATTTTGTTCCCAACGTTACAATA 59.771 33.333 13.50 10.15 31.30 1.90
342 2149 4.503741 ACATCTCATTTTGTTCCCAACG 57.496 40.909 0.00 0.00 0.00 4.10
346 2153 7.362142 GGAGAGTAAACATCTCATTTTGTTCCC 60.362 40.741 5.42 0.00 44.16 3.97
347 2154 7.391833 AGGAGAGTAAACATCTCATTTTGTTCC 59.608 37.037 5.42 0.00 44.16 3.62
357 2164 4.953579 ACCTCTGAGGAGAGTAAACATCTC 59.046 45.833 29.71 0.00 43.98 2.75
367 2178 0.738389 GCGAGAACCTCTGAGGAGAG 59.262 60.000 29.71 15.62 44.94 3.20
404 2215 9.683069 GAATAAAGCTTTGTGAGATTCTCAAAA 57.317 29.630 22.02 15.84 42.46 2.44
405 2216 9.071276 AGAATAAAGCTTTGTGAGATTCTCAAA 57.929 29.630 22.02 10.26 42.46 2.69
406 2217 8.509690 CAGAATAAAGCTTTGTGAGATTCTCAA 58.490 33.333 22.61 6.25 42.46 3.02
407 2218 7.663081 ACAGAATAAAGCTTTGTGAGATTCTCA 59.337 33.333 22.61 12.38 38.25 3.27
408 2219 8.038492 ACAGAATAAAGCTTTGTGAGATTCTC 57.962 34.615 22.61 6.73 31.52 2.87
409 2220 7.992754 ACAGAATAAAGCTTTGTGAGATTCT 57.007 32.000 22.02 21.31 31.52 2.40
413 2224 8.443160 CGATTTACAGAATAAAGCTTTGTGAGA 58.557 33.333 22.02 1.05 0.00 3.27
414 2225 8.443160 TCGATTTACAGAATAAAGCTTTGTGAG 58.557 33.333 22.02 10.75 0.00 3.51
415 2226 8.317891 TCGATTTACAGAATAAAGCTTTGTGA 57.682 30.769 22.02 5.30 0.00 3.58
416 2227 8.230486 ACTCGATTTACAGAATAAAGCTTTGTG 58.770 33.333 22.02 14.75 0.00 3.33
417 2228 8.324163 ACTCGATTTACAGAATAAAGCTTTGT 57.676 30.769 22.02 12.64 0.00 2.83
418 2229 7.632515 CGACTCGATTTACAGAATAAAGCTTTG 59.367 37.037 22.02 7.76 0.00 2.77
419 2230 7.544566 TCGACTCGATTTACAGAATAAAGCTTT 59.455 33.333 17.30 17.30 0.00 3.51
420 2231 7.009357 GTCGACTCGATTTACAGAATAAAGCTT 59.991 37.037 8.70 0.00 38.42 3.74
421 2232 6.472808 GTCGACTCGATTTACAGAATAAAGCT 59.527 38.462 8.70 0.00 38.42 3.74
422 2233 6.252869 TGTCGACTCGATTTACAGAATAAAGC 59.747 38.462 17.92 0.00 38.42 3.51
423 2234 7.511659 CGTGTCGACTCGATTTACAGAATAAAG 60.512 40.741 30.28 0.00 38.42 1.85
424 2235 6.249893 CGTGTCGACTCGATTTACAGAATAAA 59.750 38.462 30.28 0.00 38.42 1.40
425 2236 5.735892 CGTGTCGACTCGATTTACAGAATAA 59.264 40.000 30.28 0.00 38.42 1.40
426 2237 5.163824 ACGTGTCGACTCGATTTACAGAATA 60.164 40.000 37.48 2.04 38.42 1.75
427 2238 4.096311 CGTGTCGACTCGATTTACAGAAT 58.904 43.478 30.28 0.00 38.42 2.40
428 2239 3.058708 ACGTGTCGACTCGATTTACAGAA 60.059 43.478 37.48 3.16 38.42 3.02
429 2240 2.481568 ACGTGTCGACTCGATTTACAGA 59.518 45.455 37.48 3.37 38.42 3.41
439 2250 1.733399 GAGCCCAACGTGTCGACTC 60.733 63.158 17.92 12.56 0.00 3.36
441 2252 1.155424 TTTGAGCCCAACGTGTCGAC 61.155 55.000 9.11 9.11 30.88 4.20
475 2292 1.131504 GATGGTATTTGAAACGCGGCA 59.868 47.619 12.47 2.17 0.00 5.69
513 2344 1.063070 ATGGTGGTGGTGGTGGTACA 61.063 55.000 0.00 0.00 0.00 2.90
514 2345 0.111639 AATGGTGGTGGTGGTGGTAC 59.888 55.000 0.00 0.00 0.00 3.34
515 2346 0.111446 CAATGGTGGTGGTGGTGGTA 59.889 55.000 0.00 0.00 0.00 3.25
516 2347 1.152567 CAATGGTGGTGGTGGTGGT 60.153 57.895 0.00 0.00 0.00 4.16
518 2349 0.178992 AGACAATGGTGGTGGTGGTG 60.179 55.000 0.00 0.00 0.00 4.17
519 2350 0.110486 GAGACAATGGTGGTGGTGGT 59.890 55.000 0.00 0.00 0.00 4.16
520 2351 0.110295 TGAGACAATGGTGGTGGTGG 59.890 55.000 0.00 0.00 0.00 4.61
546 2377 0.978667 GGTGGTGGTGGTGGGTTTTT 60.979 55.000 0.00 0.00 0.00 1.94
547 2378 1.382009 GGTGGTGGTGGTGGGTTTT 60.382 57.895 0.00 0.00 0.00 2.43
548 2379 2.280753 GGTGGTGGTGGTGGGTTT 59.719 61.111 0.00 0.00 0.00 3.27
549 2380 3.024356 TGGTGGTGGTGGTGGGTT 61.024 61.111 0.00 0.00 0.00 4.11
550 2381 3.816090 GTGGTGGTGGTGGTGGGT 61.816 66.667 0.00 0.00 0.00 4.51
551 2382 4.596585 GGTGGTGGTGGTGGTGGG 62.597 72.222 0.00 0.00 0.00 4.61
552 2383 3.814906 TGGTGGTGGTGGTGGTGG 61.815 66.667 0.00 0.00 0.00 4.61
553 2384 2.518349 GTGGTGGTGGTGGTGGTG 60.518 66.667 0.00 0.00 0.00 4.17
554 2385 3.816090 GGTGGTGGTGGTGGTGGT 61.816 66.667 0.00 0.00 0.00 4.16
555 2386 3.814906 TGGTGGTGGTGGTGGTGG 61.815 66.667 0.00 0.00 0.00 4.61
556 2387 2.518349 GTGGTGGTGGTGGTGGTG 60.518 66.667 0.00 0.00 0.00 4.17
557 2388 3.816090 GGTGGTGGTGGTGGTGGT 61.816 66.667 0.00 0.00 0.00 4.16
558 2389 3.814906 TGGTGGTGGTGGTGGTGG 61.815 66.667 0.00 0.00 0.00 4.61
559 2390 2.518349 GTGGTGGTGGTGGTGGTG 60.518 66.667 0.00 0.00 0.00 4.17
560 2391 4.183858 CGTGGTGGTGGTGGTGGT 62.184 66.667 0.00 0.00 0.00 4.16
561 2392 4.947147 CCGTGGTGGTGGTGGTGG 62.947 72.222 0.00 0.00 0.00 4.61
562 2393 4.947147 CCCGTGGTGGTGGTGGTG 62.947 72.222 0.00 0.00 35.15 4.17
564 2395 4.329545 CTCCCGTGGTGGTGGTGG 62.330 72.222 0.00 0.00 35.15 4.61
584 2415 0.930742 GATTCGTCTCTAGCGGTGCG 60.931 60.000 0.00 0.00 0.00 5.34
618 2466 7.497249 AGAACAATCTATACTCATTTCCTGTGC 59.503 37.037 0.00 0.00 32.88 4.57
623 2471 9.400638 CGTAGAGAACAATCTATACTCATTTCC 57.599 37.037 8.47 0.00 44.52 3.13
647 2498 8.902540 TTATAATAATGCTGTGATTTCCTCGT 57.097 30.769 0.00 0.00 0.00 4.18
672 2528 9.598517 TGCTTTTGTTTTCAATCTGTTTCTTAT 57.401 25.926 0.00 0.00 39.70 1.73
673 2529 8.994429 TGCTTTTGTTTTCAATCTGTTTCTTA 57.006 26.923 0.00 0.00 39.70 2.10
674 2530 7.903995 TGCTTTTGTTTTCAATCTGTTTCTT 57.096 28.000 0.00 0.00 39.70 2.52
675 2531 8.392612 CAATGCTTTTGTTTTCAATCTGTTTCT 58.607 29.630 0.00 0.00 39.70 2.52
676 2532 7.641020 CCAATGCTTTTGTTTTCAATCTGTTTC 59.359 33.333 0.00 0.00 39.70 2.78
677 2533 7.121020 ACCAATGCTTTTGTTTTCAATCTGTTT 59.879 29.630 0.00 0.00 39.70 2.83
678 2534 6.598850 ACCAATGCTTTTGTTTTCAATCTGTT 59.401 30.769 0.00 0.00 39.70 3.16
679 2535 6.114767 ACCAATGCTTTTGTTTTCAATCTGT 58.885 32.000 0.00 0.00 39.70 3.41
680 2536 6.607735 ACCAATGCTTTTGTTTTCAATCTG 57.392 33.333 0.00 0.00 39.70 2.90
681 2537 6.038492 CCAACCAATGCTTTTGTTTTCAATCT 59.962 34.615 0.00 0.00 39.70 2.40
682 2538 6.200808 CCAACCAATGCTTTTGTTTTCAATC 58.799 36.000 0.00 0.00 39.70 2.67
683 2539 5.067544 CCCAACCAATGCTTTTGTTTTCAAT 59.932 36.000 0.00 0.00 39.70 2.57
684 2540 4.397417 CCCAACCAATGCTTTTGTTTTCAA 59.603 37.500 0.00 0.00 38.10 2.69
691 2547 2.906691 TGACCCAACCAATGCTTTTG 57.093 45.000 0.00 0.00 0.00 2.44
695 2551 1.688197 CACTTTGACCCAACCAATGCT 59.312 47.619 0.00 0.00 0.00 3.79
699 2555 1.045911 GGCCACTTTGACCCAACCAA 61.046 55.000 0.00 0.00 0.00 3.67
700 2556 1.456705 GGCCACTTTGACCCAACCA 60.457 57.895 0.00 0.00 0.00 3.67
701 2557 2.561037 CGGCCACTTTGACCCAACC 61.561 63.158 2.24 0.00 0.00 3.77
702 2558 1.826487 ACGGCCACTTTGACCCAAC 60.826 57.895 2.24 0.00 0.00 3.77
735 2591 2.340453 TATAACGTGGTCTCGGGCGC 62.340 60.000 0.00 0.00 34.94 6.53
736 2592 0.101040 TTATAACGTGGTCTCGGGCG 59.899 55.000 0.00 0.00 34.94 6.13
761 2635 3.554383 TTGGGGGATTGGGTTGGGC 62.554 63.158 0.00 0.00 0.00 5.36
790 2664 2.830827 TTTGGCGTGGTGTGTGGG 60.831 61.111 0.00 0.00 0.00 4.61
793 2717 1.251527 TTTGGTTTGGCGTGGTGTGT 61.252 50.000 0.00 0.00 0.00 3.72
823 2747 3.279434 GGGGCTCGTAGAAAAATGTGAT 58.721 45.455 0.00 0.00 34.09 3.06
849 2773 2.035442 GCTCTTTGGACACGAGGGC 61.035 63.158 0.00 0.00 0.00 5.19
874 2798 2.567049 GAGGGTGTGGTCTCGTCG 59.433 66.667 0.00 0.00 0.00 5.12
883 2807 2.207229 TGTGAGACGGGAGGGTGTG 61.207 63.158 0.00 0.00 0.00 3.82
910 2837 0.390472 GGAGAGTGGAGACAAAGGCG 60.390 60.000 0.00 0.00 46.06 5.52
912 2839 0.247736 CCGGAGAGTGGAGACAAAGG 59.752 60.000 0.00 0.00 46.06 3.11
959 2886 4.075793 TCTCTCGGGGGAGGTGGG 62.076 72.222 0.00 0.00 34.39 4.61
962 2889 1.000612 GTTCTCTCTCGGGGGAGGT 59.999 63.158 13.51 0.00 34.39 3.85
965 2892 1.077644 CTCGTTCTCTCTCGGGGGA 60.078 63.158 0.00 0.00 0.00 4.81
966 2893 2.122167 CCTCGTTCTCTCTCGGGGG 61.122 68.421 0.00 0.00 43.13 5.40
971 2898 1.000955 TGGTTTGCCTCGTTCTCTCTC 59.999 52.381 0.00 0.00 35.27 3.20
972 2899 1.048601 TGGTTTGCCTCGTTCTCTCT 58.951 50.000 0.00 0.00 35.27 3.10
979 2906 1.396607 GGGGTTTTGGTTTGCCTCGT 61.397 55.000 0.00 0.00 35.27 4.18
983 2910 1.603456 CATTGGGGTTTTGGTTTGCC 58.397 50.000 0.00 0.00 0.00 4.52
991 2918 1.185315 CGGAGATGCATTGGGGTTTT 58.815 50.000 0.00 0.00 0.00 2.43
1614 3562 3.214250 GAGCTCCGGCGGTATCCTG 62.214 68.421 27.32 11.04 44.37 3.86
1643 3591 0.686112 GTAGAGCTCCCTGAGGCTGT 60.686 60.000 10.93 0.00 39.05 4.40
1773 3721 4.087892 TGCAGCCTTCCGAGCTCC 62.088 66.667 8.47 0.00 38.95 4.70
1782 3730 0.106708 TGTCGAGTTTCTGCAGCCTT 59.893 50.000 9.47 0.00 0.00 4.35
1929 3877 0.445436 GCAGCGTCATGTTCTTGAGG 59.555 55.000 0.00 4.72 35.22 3.86
2523 4471 1.815840 GCCGCTTAGGTCAGCCTTC 60.816 63.158 0.00 0.00 44.18 3.46
2535 4483 2.511373 TCGATCGCATTGCCGCTT 60.511 55.556 11.09 0.00 0.00 4.68
3219 5167 2.416547 CCCAAGTGTTTGTATCTCAGCG 59.583 50.000 0.00 0.00 32.21 5.18
3222 5170 3.907474 TCCTCCCAAGTGTTTGTATCTCA 59.093 43.478 0.00 0.00 32.21 3.27
3303 5251 4.231273 TGGGCATATACTCATACACCAGT 58.769 43.478 0.00 0.00 0.00 4.00
3330 5278 1.671901 GGAGAAGCTCCCCGAGACTG 61.672 65.000 1.97 0.00 44.36 3.51
3616 5564 8.436200 CAGACTGAACCTAATTAAAAGAAGACG 58.564 37.037 0.00 0.00 0.00 4.18
3619 5567 9.495572 AGTCAGACTGAACCTAATTAAAAGAAG 57.504 33.333 6.76 0.00 0.00 2.85
3632 5580 4.966965 TCGAGAATAGTCAGACTGAACC 57.033 45.455 13.84 0.00 0.00 3.62
3633 5581 6.237701 GCATTTCGAGAATAGTCAGACTGAAC 60.238 42.308 13.84 1.94 0.00 3.18
3668 5616 7.701445 AGCATTAAAGTACTCATCAAATCAGC 58.299 34.615 0.00 0.00 0.00 4.26
3670 5618 9.453572 AGAAGCATTAAAGTACTCATCAAATCA 57.546 29.630 0.00 0.00 0.00 2.57
3691 5639 4.954092 ACAAGCTTACTATGCAAGAAGC 57.046 40.909 14.10 14.10 43.73 3.86
3692 5640 7.834068 TCTAACAAGCTTACTATGCAAGAAG 57.166 36.000 0.00 0.00 0.00 2.85
3693 5641 8.615878 TTTCTAACAAGCTTACTATGCAAGAA 57.384 30.769 0.00 0.00 0.00 2.52
3694 5642 8.504005 GTTTTCTAACAAGCTTACTATGCAAGA 58.496 33.333 0.00 0.00 34.31 3.02
3695 5643 8.507249 AGTTTTCTAACAAGCTTACTATGCAAG 58.493 33.333 0.00 0.00 36.70 4.01
3696 5644 8.289618 CAGTTTTCTAACAAGCTTACTATGCAA 58.710 33.333 0.00 0.00 36.70 4.08
3697 5645 7.444183 ACAGTTTTCTAACAAGCTTACTATGCA 59.556 33.333 0.00 0.00 36.70 3.96
3698 5646 7.807680 ACAGTTTTCTAACAAGCTTACTATGC 58.192 34.615 0.00 0.00 36.70 3.14
3704 5652 8.932791 GCATAGTACAGTTTTCTAACAAGCTTA 58.067 33.333 0.00 0.00 36.70 3.09
3705 5653 7.094762 GGCATAGTACAGTTTTCTAACAAGCTT 60.095 37.037 0.00 0.00 36.70 3.74
3706 5654 6.371825 GGCATAGTACAGTTTTCTAACAAGCT 59.628 38.462 0.00 0.00 36.70 3.74
3707 5655 6.403309 GGGCATAGTACAGTTTTCTAACAAGC 60.403 42.308 0.00 0.00 36.70 4.01
3708 5656 6.879458 AGGGCATAGTACAGTTTTCTAACAAG 59.121 38.462 0.00 0.00 36.70 3.16
3709 5657 6.775708 AGGGCATAGTACAGTTTTCTAACAA 58.224 36.000 0.00 0.00 36.70 2.83
3710 5658 6.368779 AGGGCATAGTACAGTTTTCTAACA 57.631 37.500 0.00 0.00 36.70 2.41
3711 5659 7.011202 GCTTAGGGCATAGTACAGTTTTCTAAC 59.989 40.741 0.00 0.00 41.35 2.34
3712 5660 7.046033 GCTTAGGGCATAGTACAGTTTTCTAA 58.954 38.462 0.00 0.00 41.35 2.10
3713 5661 6.579865 GCTTAGGGCATAGTACAGTTTTCTA 58.420 40.000 0.00 0.00 41.35 2.10
3714 5662 5.429130 GCTTAGGGCATAGTACAGTTTTCT 58.571 41.667 0.00 0.00 41.35 2.52
3715 5663 5.736486 GCTTAGGGCATAGTACAGTTTTC 57.264 43.478 0.00 0.00 41.35 2.29
3729 5677 3.146847 ACAGTAAACAGTTGCTTAGGGC 58.853 45.455 0.00 0.00 42.22 5.19
3730 5678 5.548406 AGTACAGTAAACAGTTGCTTAGGG 58.452 41.667 0.00 0.00 0.00 3.53
3731 5679 7.328737 CAGTAGTACAGTAAACAGTTGCTTAGG 59.671 40.741 2.52 0.00 0.00 2.69
3732 5680 7.866393 ACAGTAGTACAGTAAACAGTTGCTTAG 59.134 37.037 2.52 0.00 0.00 2.18
3733 5681 7.650504 CACAGTAGTACAGTAAACAGTTGCTTA 59.349 37.037 2.52 0.00 0.00 3.09
3734 5682 6.479001 CACAGTAGTACAGTAAACAGTTGCTT 59.521 38.462 2.52 0.00 0.00 3.91
3735 5683 5.983720 CACAGTAGTACAGTAAACAGTTGCT 59.016 40.000 2.52 0.00 0.00 3.91
3736 5684 5.981315 TCACAGTAGTACAGTAAACAGTTGC 59.019 40.000 2.52 0.00 0.00 4.17
3737 5685 7.201145 AGTCACAGTAGTACAGTAAACAGTTG 58.799 38.462 2.52 0.00 0.00 3.16
3738 5686 7.344095 AGTCACAGTAGTACAGTAAACAGTT 57.656 36.000 2.52 0.00 0.00 3.16
3739 5687 6.956202 AGTCACAGTAGTACAGTAAACAGT 57.044 37.500 2.52 0.00 0.00 3.55
3740 5688 7.919091 TGAAAGTCACAGTAGTACAGTAAACAG 59.081 37.037 2.52 0.00 0.00 3.16
3741 5689 7.703621 GTGAAAGTCACAGTAGTACAGTAAACA 59.296 37.037 2.52 0.00 46.22 2.83
3742 5690 8.058916 GTGAAAGTCACAGTAGTACAGTAAAC 57.941 38.462 2.52 3.21 46.22 2.01
3757 5705 8.324659 AACTACCAAGTCTGAAGTGAAAGTCAC 61.325 40.741 0.00 0.00 40.47 3.67
3758 5706 4.487714 ACCAAGTCTGAAGTGAAAGTCA 57.512 40.909 0.00 0.00 0.00 3.41
3759 5707 5.602628 ACTACCAAGTCTGAAGTGAAAGTC 58.397 41.667 0.00 0.00 0.00 3.01
3760 5708 5.615925 ACTACCAAGTCTGAAGTGAAAGT 57.384 39.130 0.00 0.00 0.00 2.66
3761 5709 5.817816 ACAACTACCAAGTCTGAAGTGAAAG 59.182 40.000 0.00 0.00 33.75 2.62
3762 5710 5.741011 ACAACTACCAAGTCTGAAGTGAAA 58.259 37.500 0.00 0.00 33.75 2.69
3763 5711 5.353394 ACAACTACCAAGTCTGAAGTGAA 57.647 39.130 0.00 0.00 33.75 3.18
3764 5712 5.353394 AACAACTACCAAGTCTGAAGTGA 57.647 39.130 0.00 0.00 33.75 3.41
3765 5713 5.276868 CGAAACAACTACCAAGTCTGAAGTG 60.277 44.000 0.00 0.00 33.75 3.16
3766 5714 4.809426 CGAAACAACTACCAAGTCTGAAGT 59.191 41.667 0.00 0.00 33.75 3.01
3767 5715 5.047847 TCGAAACAACTACCAAGTCTGAAG 58.952 41.667 0.00 0.00 33.75 3.02
3768 5716 5.013568 TCGAAACAACTACCAAGTCTGAA 57.986 39.130 0.00 0.00 33.75 3.02
3769 5717 4.659111 TCGAAACAACTACCAAGTCTGA 57.341 40.909 0.00 0.00 33.75 3.27
3770 5718 4.988540 TCATCGAAACAACTACCAAGTCTG 59.011 41.667 0.00 0.00 33.75 3.51
3771 5719 5.209818 TCATCGAAACAACTACCAAGTCT 57.790 39.130 0.00 0.00 33.75 3.24
3772 5720 4.389077 CCTCATCGAAACAACTACCAAGTC 59.611 45.833 0.00 0.00 33.75 3.01
3773 5721 4.039973 TCCTCATCGAAACAACTACCAAGT 59.960 41.667 0.00 0.00 37.65 3.16
3774 5722 4.389077 GTCCTCATCGAAACAACTACCAAG 59.611 45.833 0.00 0.00 0.00 3.61
3775 5723 4.039973 AGTCCTCATCGAAACAACTACCAA 59.960 41.667 0.00 0.00 0.00 3.67
3776 5724 3.576982 AGTCCTCATCGAAACAACTACCA 59.423 43.478 0.00 0.00 0.00 3.25
3777 5725 4.189639 AGTCCTCATCGAAACAACTACC 57.810 45.455 0.00 0.00 0.00 3.18
3778 5726 7.647907 TTAAAGTCCTCATCGAAACAACTAC 57.352 36.000 0.00 0.00 0.00 2.73
3779 5727 7.148474 GCATTAAAGTCCTCATCGAAACAACTA 60.148 37.037 0.00 0.00 0.00 2.24
3780 5728 6.348540 GCATTAAAGTCCTCATCGAAACAACT 60.349 38.462 0.00 0.00 0.00 3.16
3781 5729 5.795441 GCATTAAAGTCCTCATCGAAACAAC 59.205 40.000 0.00 0.00 0.00 3.32
3782 5730 5.705441 AGCATTAAAGTCCTCATCGAAACAA 59.295 36.000 0.00 0.00 0.00 2.83
3783 5731 5.245531 AGCATTAAAGTCCTCATCGAAACA 58.754 37.500 0.00 0.00 0.00 2.83
3784 5732 5.803020 AGCATTAAAGTCCTCATCGAAAC 57.197 39.130 0.00 0.00 0.00 2.78
3785 5733 6.173339 AGAAGCATTAAAGTCCTCATCGAAA 58.827 36.000 0.00 0.00 0.00 3.46
3786 5734 5.734720 AGAAGCATTAAAGTCCTCATCGAA 58.265 37.500 0.00 0.00 0.00 3.71
3787 5735 5.344743 AGAAGCATTAAAGTCCTCATCGA 57.655 39.130 0.00 0.00 0.00 3.59
3788 5736 5.728898 GCAAGAAGCATTAAAGTCCTCATCG 60.729 44.000 0.00 0.00 44.79 3.84
3789 5737 5.576895 GCAAGAAGCATTAAAGTCCTCATC 58.423 41.667 0.00 0.00 44.79 2.92
3790 5738 5.573337 GCAAGAAGCATTAAAGTCCTCAT 57.427 39.130 0.00 0.00 44.79 2.90
3804 5752 3.941483 TCTAACAAGCCTATGCAAGAAGC 59.059 43.478 0.00 0.00 45.96 3.86
3808 5756 6.088824 CAGTTTTCTAACAAGCCTATGCAAG 58.911 40.000 0.00 0.00 36.99 4.01
3814 5762 6.177310 TGGTACAGTTTTCTAACAAGCCTA 57.823 37.500 0.00 0.00 36.70 3.93
3830 5778 6.990447 AACAGTTGTTTACGGCATGGTACAG 61.990 44.000 0.00 0.00 36.85 2.74
3834 5782 1.975660 ACAGTTGTTTACGGCATGGT 58.024 45.000 0.00 0.00 0.00 3.55
3845 5793 8.823818 GTCATAACAGTACAGTAAACAGTTGTT 58.176 33.333 0.00 0.00 40.50 2.83
3849 5797 9.257651 GAAAGTCATAACAGTACAGTAAACAGT 57.742 33.333 0.00 0.00 0.00 3.55
3850 5798 9.256477 TGAAAGTCATAACAGTACAGTAAACAG 57.744 33.333 0.00 0.00 0.00 3.16
3851 5799 9.037737 GTGAAAGTCATAACAGTACAGTAAACA 57.962 33.333 0.00 0.00 0.00 2.83
3852 5800 9.257651 AGTGAAAGTCATAACAGTACAGTAAAC 57.742 33.333 0.00 0.00 0.00 2.01
3853 5801 9.826574 AAGTGAAAGTCATAACAGTACAGTAAA 57.173 29.630 0.00 0.00 0.00 2.01
3854 5802 9.472361 GAAGTGAAAGTCATAACAGTACAGTAA 57.528 33.333 0.00 0.00 0.00 2.24
3856 5804 7.497595 TGAAGTGAAAGTCATAACAGTACAGT 58.502 34.615 0.00 0.00 0.00 3.55
3857 5805 7.867909 TCTGAAGTGAAAGTCATAACAGTACAG 59.132 37.037 0.00 0.00 0.00 2.74
3859 5807 7.868415 AGTCTGAAGTGAAAGTCATAACAGTAC 59.132 37.037 0.00 0.00 0.00 2.73
3874 5822 2.965831 ACAGCTACCAAGTCTGAAGTGA 59.034 45.455 0.00 0.00 33.62 3.41
3875 5823 3.393089 ACAGCTACCAAGTCTGAAGTG 57.607 47.619 0.00 0.00 33.62 3.16
3876 5824 4.423625 AAACAGCTACCAAGTCTGAAGT 57.576 40.909 0.00 0.00 33.62 3.01
3877 5825 4.816385 TCAAAACAGCTACCAAGTCTGAAG 59.184 41.667 0.00 0.00 33.62 3.02
3878 5826 4.776349 TCAAAACAGCTACCAAGTCTGAA 58.224 39.130 0.00 0.00 33.62 3.02
3879 5827 4.415881 TCAAAACAGCTACCAAGTCTGA 57.584 40.909 0.00 0.00 33.62 3.27
3880 5828 4.756642 TCATCAAAACAGCTACCAAGTCTG 59.243 41.667 0.00 0.00 34.78 3.51
3881 5829 4.973168 TCATCAAAACAGCTACCAAGTCT 58.027 39.130 0.00 0.00 0.00 3.24
3882 5830 4.757149 ACTCATCAAAACAGCTACCAAGTC 59.243 41.667 0.00 0.00 0.00 3.01
3884 5832 6.992063 ATACTCATCAAAACAGCTACCAAG 57.008 37.500 0.00 0.00 0.00 3.61
3886 5834 6.939730 TGAAATACTCATCAAAACAGCTACCA 59.060 34.615 0.00 0.00 0.00 3.25
3887 5835 7.377766 TGAAATACTCATCAAAACAGCTACC 57.622 36.000 0.00 0.00 0.00 3.18
3888 5836 9.282247 CATTGAAATACTCATCAAAACAGCTAC 57.718 33.333 0.00 0.00 38.88 3.58
3889 5837 7.970061 GCATTGAAATACTCATCAAAACAGCTA 59.030 33.333 0.00 0.00 38.88 3.32
3890 5838 6.810182 GCATTGAAATACTCATCAAAACAGCT 59.190 34.615 0.00 0.00 38.88 4.24
3891 5839 6.810182 AGCATTGAAATACTCATCAAAACAGC 59.190 34.615 0.00 0.00 38.88 4.40
3892 5840 8.752766 AAGCATTGAAATACTCATCAAAACAG 57.247 30.769 0.00 0.00 38.88 3.16
3909 6036 3.070878 TGACCAGTGTCAGTAAGCATTGA 59.929 43.478 0.00 0.00 46.40 2.57
3926 6053 6.295688 GGGAGTAAACTCTCATAACTTGACCA 60.296 42.308 9.84 0.00 42.97 4.02
3938 6065 1.628846 TGGGCTTGGGAGTAAACTCTC 59.371 52.381 9.84 6.56 43.73 3.20
3946 6073 1.077265 CATGGTTGGGCTTGGGAGT 59.923 57.895 0.00 0.00 0.00 3.85
3949 6076 1.766625 TTTGCATGGTTGGGCTTGGG 61.767 55.000 0.00 0.00 0.00 4.12
3954 6081 2.173433 GCAATTTGCATGGTTGGGC 58.827 52.632 16.35 0.00 44.26 5.36
3964 6091 9.956720 AATAACTACATCTTGATAGCAATTTGC 57.043 29.630 13.55 13.55 45.46 3.68
3989 6116 6.385649 AAGCCTCGATGTTTCAAGTTTTAA 57.614 33.333 0.00 0.00 0.00 1.52
3995 6122 4.756084 AAGAAAGCCTCGATGTTTCAAG 57.244 40.909 13.62 0.00 33.43 3.02
4000 6127 5.010012 ACAAATCAAAGAAAGCCTCGATGTT 59.990 36.000 0.00 0.00 0.00 2.71
4005 6132 4.913924 CAGAACAAATCAAAGAAAGCCTCG 59.086 41.667 0.00 0.00 0.00 4.63
4022 6149 9.567776 TTAGGTTTACAGATTTCATTCAGAACA 57.432 29.630 0.00 0.00 35.56 3.18
4025 6152 7.876068 ACGTTAGGTTTACAGATTTCATTCAGA 59.124 33.333 0.00 0.00 0.00 3.27
4034 6161 5.494390 AAGGGACGTTAGGTTTACAGATT 57.506 39.130 0.00 0.00 0.00 2.40
4048 6175 2.440627 AGGTGGTTCTAAAAAGGGACGT 59.559 45.455 0.00 0.00 0.00 4.34
4053 6180 6.715264 ACTGTAATGAGGTGGTTCTAAAAAGG 59.285 38.462 0.00 0.00 0.00 3.11
4057 6185 6.042781 ACTGACTGTAATGAGGTGGTTCTAAA 59.957 38.462 0.00 0.00 0.00 1.85
4079 6207 5.649395 TGAATCAAAAGCCTCTTATGGACTG 59.351 40.000 0.00 0.00 0.00 3.51
4111 6246 9.283768 CTAAATATACATACACAAGGAATGCCA 57.716 33.333 0.00 0.00 36.29 4.92
4161 6296 3.565482 GGAACATCAAGTGAAGAGTGCAA 59.435 43.478 0.00 0.00 0.00 4.08
4163 6298 3.406764 AGGAACATCAAGTGAAGAGTGC 58.593 45.455 0.00 0.00 0.00 4.40
4165 6300 5.337169 GCTAGAGGAACATCAAGTGAAGAGT 60.337 44.000 0.00 0.00 0.00 3.24
4166 6301 5.105392 AGCTAGAGGAACATCAAGTGAAGAG 60.105 44.000 0.00 0.00 0.00 2.85
4167 6302 4.774726 AGCTAGAGGAACATCAAGTGAAGA 59.225 41.667 0.00 0.00 0.00 2.87
4168 6303 4.869297 CAGCTAGAGGAACATCAAGTGAAG 59.131 45.833 0.00 0.00 0.00 3.02
4169 6304 4.825422 CAGCTAGAGGAACATCAAGTGAA 58.175 43.478 0.00 0.00 0.00 3.18
4171 6306 2.935201 GCAGCTAGAGGAACATCAAGTG 59.065 50.000 0.00 0.00 0.00 3.16
4225 6360 2.391616 ACAGAGCAATGCGAGATTGA 57.608 45.000 10.79 0.00 0.00 2.57
4350 6485 4.323477 TCGCCAAACTCCCCCACG 62.323 66.667 0.00 0.00 0.00 4.94
4403 6538 2.203625 GCTCCTTGTTTGGGCCCA 60.204 61.111 24.45 24.45 0.00 5.36
4404 6539 2.203625 TGCTCCTTGTTTGGGCCC 60.204 61.111 17.59 17.59 0.00 5.80
4422 6557 1.141858 GGGTCCAGGATCTTCATCACC 59.858 57.143 0.00 0.00 0.00 4.02
4494 6629 1.597854 CTCCTCGGTGCACAGCAAA 60.598 57.895 20.43 2.17 41.47 3.68
4539 6674 0.611896 TCAGGATCTGCACGACCTCA 60.612 55.000 0.00 0.00 0.00 3.86
4674 6809 1.145759 GATGATCTTTCGCGTCGCCA 61.146 55.000 12.44 1.79 0.00 5.69
4692 6827 1.095807 GCTGCTGCTGCTGATGATGA 61.096 55.000 23.39 0.00 40.01 2.92
4695 6830 2.038837 GTGCTGCTGCTGCTGATGA 61.039 57.895 27.67 8.50 40.01 2.92
4697 6832 2.033602 TGTGCTGCTGCTGCTGAT 59.966 55.556 27.67 0.00 40.01 2.90
4698 6833 2.976350 GTGTGCTGCTGCTGCTGA 60.976 61.111 27.67 14.19 40.01 4.26
4699 6834 2.733171 CTTGTGTGCTGCTGCTGCTG 62.733 60.000 27.67 16.73 40.48 4.41
4700 6835 2.517638 TTGTGTGCTGCTGCTGCT 60.518 55.556 27.67 0.00 40.48 4.24
4774 6909 1.082431 TCCGCATGTTTTCGCAACG 60.082 52.632 0.00 0.00 0.00 4.10
4776 6911 0.665835 AAGTCCGCATGTTTTCGCAA 59.334 45.000 0.00 0.00 0.00 4.85
4777 6912 0.237235 GAAGTCCGCATGTTTTCGCA 59.763 50.000 0.00 0.00 0.00 5.10
4778 6913 0.517316 AGAAGTCCGCATGTTTTCGC 59.483 50.000 0.00 0.00 0.00 4.70
4792 6941 1.071605 GCTTGCACGATCGAAGAAGT 58.928 50.000 24.34 0.00 43.58 3.01
4812 6962 2.297597 CGAACCCTAGATTCAGGCCTAG 59.702 54.545 3.98 0.00 34.02 3.02
4842 6996 2.128771 ACAGCACACCAACAAGTCTT 57.871 45.000 0.00 0.00 0.00 3.01
4849 7003 3.605634 TGGATATGTACAGCACACCAAC 58.394 45.455 0.33 0.00 40.86 3.77
4850 7004 3.990959 TGGATATGTACAGCACACCAA 57.009 42.857 0.33 0.00 40.86 3.67
4852 7006 2.614057 GCTTGGATATGTACAGCACACC 59.386 50.000 0.33 1.39 40.86 4.16
5015 7185 8.098286 AGATGGCTACTACTGATACTACTACTG 58.902 40.741 0.00 0.00 0.00 2.74
5119 7297 3.008049 ACACGAGGCACTTTAAAGAGGAT 59.992 43.478 21.92 5.00 41.55 3.24
5134 7321 6.470235 GCAAATATTTGAAGATCAACACGAGG 59.530 38.462 28.33 0.00 40.55 4.63
5137 7324 7.745022 ATGCAAATATTTGAAGATCAACACG 57.255 32.000 28.33 1.23 40.55 4.49
5138 7325 8.928733 ACAATGCAAATATTTGAAGATCAACAC 58.071 29.630 28.33 9.58 40.55 3.32
5148 7335 7.095910 CCCACTACAACAATGCAAATATTTGA 58.904 34.615 28.33 15.28 40.55 2.69
5161 7348 1.000506 GAGACGAGCCCACTACAACAA 59.999 52.381 0.00 0.00 0.00 2.83
5163 7350 0.601558 TGAGACGAGCCCACTACAAC 59.398 55.000 0.00 0.00 0.00 3.32
5167 7354 1.103803 GACATGAGACGAGCCCACTA 58.896 55.000 0.00 0.00 0.00 2.74
5171 7358 1.142748 CTGGACATGAGACGAGCCC 59.857 63.158 0.00 0.00 0.00 5.19
5184 7371 4.464069 ACTCTTGCTATGAGAACTGGAC 57.536 45.455 7.87 0.00 35.66 4.02
5192 7379 4.645136 TGGTGGTACTACTCTTGCTATGAG 59.355 45.833 9.41 0.00 37.55 2.90
5199 7386 3.935203 CAGCAATGGTGGTACTACTCTTG 59.065 47.826 9.41 12.97 33.05 3.02
5200 7387 3.619979 GCAGCAATGGTGGTACTACTCTT 60.620 47.826 14.61 0.73 33.05 2.85
5201 7388 2.093447 GCAGCAATGGTGGTACTACTCT 60.093 50.000 14.61 0.00 33.05 3.24
5202 7389 2.093447 AGCAGCAATGGTGGTACTACTC 60.093 50.000 15.81 0.47 39.98 2.59
5203 7390 1.909302 AGCAGCAATGGTGGTACTACT 59.091 47.619 15.81 0.00 39.98 2.57
5204 7391 2.403252 AGCAGCAATGGTGGTACTAC 57.597 50.000 15.81 0.00 39.98 2.73
5205 7392 3.262151 TGTTAGCAGCAATGGTGGTACTA 59.738 43.478 21.68 12.08 42.31 1.82
5206 7393 2.039746 TGTTAGCAGCAATGGTGGTACT 59.960 45.455 21.68 9.60 42.31 2.73
5207 7394 2.420022 CTGTTAGCAGCAATGGTGGTAC 59.580 50.000 21.68 16.75 42.31 3.34
5208 7395 2.304470 TCTGTTAGCAGCAATGGTGGTA 59.696 45.455 18.69 18.69 41.87 3.25
5209 7396 1.073763 TCTGTTAGCAGCAATGGTGGT 59.926 47.619 20.77 20.77 43.99 4.16
5210 7397 1.741706 CTCTGTTAGCAGCAATGGTGG 59.258 52.381 14.61 0.00 42.29 4.61
5211 7398 2.703416 TCTCTGTTAGCAGCAATGGTG 58.297 47.619 8.23 8.23 42.29 4.17
5212 7399 3.423539 TTCTCTGTTAGCAGCAATGGT 57.576 42.857 0.97 0.00 42.29 3.55
5213 7400 4.005650 TCTTTCTCTGTTAGCAGCAATGG 58.994 43.478 0.97 0.00 42.29 3.16
5214 7401 5.353400 TCATCTTTCTCTGTTAGCAGCAATG 59.647 40.000 0.97 0.75 42.29 2.82
5215 7402 5.494724 TCATCTTTCTCTGTTAGCAGCAAT 58.505 37.500 0.97 0.00 42.29 3.56
5218 7429 7.727331 ATTATCATCTTTCTCTGTTAGCAGC 57.273 36.000 0.97 0.00 42.29 5.25
5224 7435 7.615582 TTCGCAATTATCATCTTTCTCTGTT 57.384 32.000 0.00 0.00 0.00 3.16
5225 7436 6.238320 GCTTCGCAATTATCATCTTTCTCTGT 60.238 38.462 0.00 0.00 0.00 3.41
5227 7438 5.050499 CGCTTCGCAATTATCATCTTTCTCT 60.050 40.000 0.00 0.00 0.00 3.10
5246 7457 2.018324 GGCAGCACAAAAGCGCTTC 61.018 57.895 25.24 10.61 35.96 3.86
5281 7493 1.888512 GTCAAAAAGGGAGCAGCATCA 59.111 47.619 0.00 0.00 0.00 3.07
5282 7494 2.165998 AGTCAAAAAGGGAGCAGCATC 58.834 47.619 0.00 0.00 0.00 3.91
5283 7495 2.299326 AGTCAAAAAGGGAGCAGCAT 57.701 45.000 0.00 0.00 0.00 3.79
5284 7496 2.071778 AAGTCAAAAAGGGAGCAGCA 57.928 45.000 0.00 0.00 0.00 4.41
5307 7519 2.509052 TGGTTGTCTCTGAACGTCAG 57.491 50.000 8.24 8.24 45.59 3.51
5328 7540 6.348868 GGCTTCGATCAACAAGAATTCTTTCT 60.349 38.462 18.16 5.52 44.20 2.52
5329 7541 5.797434 GGCTTCGATCAACAAGAATTCTTTC 59.203 40.000 18.16 11.64 33.11 2.62
5348 7577 2.292802 GACATTCGCGAACCGGCTTC 62.293 60.000 26.00 10.20 37.59 3.86
5407 7646 6.804677 ACATTAGTCACAGATCAGATCAGAC 58.195 40.000 13.14 15.39 0.00 3.51
5448 7731 1.905839 TGGATTAGATGGGGCCTCAA 58.094 50.000 10.86 0.00 0.00 3.02
5470 7753 0.997932 GAGGCGCATCATCGATCATC 59.002 55.000 18.55 0.00 0.00 2.92
5471 7754 3.134401 GAGGCGCATCATCGATCAT 57.866 52.632 18.55 0.00 0.00 2.45
5472 7755 4.661461 GAGGCGCATCATCGATCA 57.339 55.556 18.55 0.00 0.00 2.92
5514 7817 1.032014 GCGGCATGATTAACACCCAT 58.968 50.000 0.00 0.00 0.00 4.00
5515 7818 0.322906 TGCGGCATGATTAACACCCA 60.323 50.000 0.00 0.00 0.00 4.51
5519 7822 1.372838 CCGGTGCGGCATGATTAACA 61.373 55.000 5.72 0.00 41.17 2.41
5641 7966 1.195115 CAGATCAGGGGAACGAGGAA 58.805 55.000 0.00 0.00 0.00 3.36
5648 7973 3.902467 CAGATCAGATCAGATCAGGGGAA 59.098 47.826 24.89 0.00 45.39 3.97
5670 7995 2.673368 CGGAGCAAAACCAGTGTAGATC 59.327 50.000 0.00 0.00 0.00 2.75
5677 8002 2.978010 CGCCGGAGCAAAACCAGT 60.978 61.111 5.05 0.00 39.83 4.00
5681 8006 1.275471 GAAAAGCGCCGGAGCAAAAC 61.275 55.000 32.12 16.09 39.83 2.43
5697 8022 4.083003 CCTGGATTGATTTTCCGTTCGAAA 60.083 41.667 0.00 0.00 38.74 3.46
5698 8023 3.438781 CCTGGATTGATTTTCCGTTCGAA 59.561 43.478 0.00 0.00 35.94 3.71
5699 8024 3.006940 CCTGGATTGATTTTCCGTTCGA 58.993 45.455 0.00 0.00 35.94 3.71
5701 8026 2.427095 CCCCTGGATTGATTTTCCGTTC 59.573 50.000 0.00 0.00 35.94 3.95
5717 8042 0.246635 AAACTCGATCGACACCCCTG 59.753 55.000 15.15 5.16 0.00 4.45
5723 8048 2.031420 ACGTGAAGAAACTCGATCGACA 60.031 45.455 15.15 5.94 0.00 4.35
5727 8052 2.526688 CGCTACGTGAAGAAACTCGATC 59.473 50.000 0.00 0.00 0.00 3.69
5730 8055 1.682982 ACGCTACGTGAAGAAACTCG 58.317 50.000 0.00 0.00 39.18 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.