Multiple sequence alignment - TraesCS5A01G405900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G405900 chr5A 100.000 4784 0 0 3124 7907 597501286 597506069 0.000000e+00 8835
1 TraesCS5A01G405900 chr5A 100.000 2965 0 0 1 2965 597498163 597501127 0.000000e+00 5476
2 TraesCS5A01G405900 chr5B 94.309 2126 77 15 579 2679 586275131 586277237 0.000000e+00 3216
3 TraesCS5A01G405900 chr5B 90.162 1108 61 16 6118 7200 586279255 586280339 0.000000e+00 1399
4 TraesCS5A01G405900 chr5B 93.642 755 39 9 3153 3902 586277488 586278238 0.000000e+00 1120
5 TraesCS5A01G405900 chr5B 87.874 701 46 21 3901 4580 586278269 586278951 0.000000e+00 787
6 TraesCS5A01G405900 chr5B 93.015 272 10 6 5857 6123 586278937 586279204 9.620000e-104 388
7 TraesCS5A01G405900 chr5B 80.000 320 41 9 231 530 586274561 586274877 1.730000e-51 215
8 TraesCS5A01G405900 chr5B 90.566 159 8 3 7184 7335 586280522 586280680 3.740000e-48 204
9 TraesCS5A01G405900 chr5B 91.736 121 6 3 2838 2954 586277327 586277447 1.770000e-36 165
10 TraesCS5A01G405900 chr5B 96.907 97 2 1 2717 2813 586277234 586277329 2.280000e-35 161
11 TraesCS5A01G405900 chr5D 90.000 2310 132 43 1 2276 478448403 478450647 0.000000e+00 2894
12 TraesCS5A01G405900 chr5D 90.468 1238 47 30 6143 7335 478453261 478454472 0.000000e+00 1567
13 TraesCS5A01G405900 chr5D 93.503 785 34 13 3124 3902 478451463 478452236 0.000000e+00 1151
14 TraesCS5A01G405900 chr5D 84.615 702 50 20 3901 4580 478452267 478452932 0.000000e+00 645
15 TraesCS5A01G405900 chr5D 91.026 390 24 7 2296 2679 478450839 478451223 4.230000e-142 516
16 TraesCS5A01G405900 chr5D 94.485 272 9 3 5857 6123 478452918 478453188 1.590000e-111 414
17 TraesCS5A01G405900 chr5D 86.611 239 15 6 2717 2954 478451220 478451442 1.700000e-61 248
18 TraesCS5A01G405900 chr6D 92.035 1268 95 6 4592 5856 411551723 411552987 0.000000e+00 1777
19 TraesCS5A01G405900 chr6D 91.673 1249 97 7 4606 5851 454103178 454101934 0.000000e+00 1724
20 TraesCS5A01G405900 chr6D 92.075 1224 92 5 4591 5813 20341212 20339993 0.000000e+00 1718
21 TraesCS5A01G405900 chr2D 91.725 1281 97 8 4576 5851 619051758 619050482 0.000000e+00 1770
22 TraesCS5A01G405900 chr1D 91.949 1267 93 7 4590 5851 427323732 427324994 0.000000e+00 1766
23 TraesCS5A01G405900 chr3A 91.411 1269 102 7 4591 5855 991804 990539 0.000000e+00 1733
24 TraesCS5A01G405900 chr3D 91.045 1273 106 6 4584 5851 25183890 25185159 0.000000e+00 1712
25 TraesCS5A01G405900 chr3B 91.017 1269 91 14 4589 5855 237216559 237217806 0.000000e+00 1690
26 TraesCS5A01G405900 chrUn 90.830 1265 110 6 4592 5855 26963495 26964754 0.000000e+00 1688
27 TraesCS5A01G405900 chrUn 97.561 574 12 2 7336 7907 243783484 243782911 0.000000e+00 981
28 TraesCS5A01G405900 chrUn 97.561 574 12 2 7336 7907 388206483 388207056 0.000000e+00 981
29 TraesCS5A01G405900 chrUn 90.476 105 10 0 6674 6778 269814258 269814154 1.070000e-28 139
30 TraesCS5A01G405900 chr1B 98.077 572 9 2 7336 7905 625721014 625720443 0.000000e+00 994
31 TraesCS5A01G405900 chr1B 97.909 574 10 2 7336 7907 647588864 647589437 0.000000e+00 992
32 TraesCS5A01G405900 chr6A 97.731 573 11 2 7337 7907 1813781 1813209 0.000000e+00 985
33 TraesCS5A01G405900 chr6B 97.561 574 12 2 7336 7907 92180145 92180718 0.000000e+00 981
34 TraesCS5A01G405900 chr6B 97.561 574 11 3 7336 7907 101240464 101239892 0.000000e+00 979
35 TraesCS5A01G405900 chr4B 97.561 574 10 4 7336 7907 535306331 535305760 0.000000e+00 979
36 TraesCS5A01G405900 chr4B 87.931 116 12 2 6673 6787 15760520 15760406 1.380000e-27 135
37 TraesCS5A01G405900 chr2A 97.387 574 13 2 7336 7907 741056 740483 0.000000e+00 976
38 TraesCS5A01G405900 chr7A 84.753 223 18 6 5636 5858 603333904 603334110 8.040000e-50 209
39 TraesCS5A01G405900 chr4D 74.545 385 78 18 6402 6778 8411777 8412149 4.940000e-32 150
40 TraesCS5A01G405900 chr4D 90.476 105 10 0 6674 6778 8593368 8593264 1.070000e-28 139
41 TraesCS5A01G405900 chr4D 90.476 105 10 0 6674 6778 8623070 8622966 1.070000e-28 139
42 TraesCS5A01G405900 chr4D 90.196 102 10 0 6674 6775 32940069 32939968 4.980000e-27 134
43 TraesCS5A01G405900 chr4A 90.566 106 10 0 6673 6778 595055513 595055618 2.970000e-29 141


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G405900 chr5A 597498163 597506069 7906 False 7155.500000 8835 100.000000 1 7907 2 chr5A.!!$F1 7906
1 TraesCS5A01G405900 chr5B 586274561 586280680 6119 False 850.555556 3216 90.912333 231 7335 9 chr5B.!!$F1 7104
2 TraesCS5A01G405900 chr5D 478448403 478454472 6069 False 1062.142857 2894 90.101143 1 7335 7 chr5D.!!$F1 7334
3 TraesCS5A01G405900 chr6D 411551723 411552987 1264 False 1777.000000 1777 92.035000 4592 5856 1 chr6D.!!$F1 1264
4 TraesCS5A01G405900 chr6D 454101934 454103178 1244 True 1724.000000 1724 91.673000 4606 5851 1 chr6D.!!$R2 1245
5 TraesCS5A01G405900 chr6D 20339993 20341212 1219 True 1718.000000 1718 92.075000 4591 5813 1 chr6D.!!$R1 1222
6 TraesCS5A01G405900 chr2D 619050482 619051758 1276 True 1770.000000 1770 91.725000 4576 5851 1 chr2D.!!$R1 1275
7 TraesCS5A01G405900 chr1D 427323732 427324994 1262 False 1766.000000 1766 91.949000 4590 5851 1 chr1D.!!$F1 1261
8 TraesCS5A01G405900 chr3A 990539 991804 1265 True 1733.000000 1733 91.411000 4591 5855 1 chr3A.!!$R1 1264
9 TraesCS5A01G405900 chr3D 25183890 25185159 1269 False 1712.000000 1712 91.045000 4584 5851 1 chr3D.!!$F1 1267
10 TraesCS5A01G405900 chr3B 237216559 237217806 1247 False 1690.000000 1690 91.017000 4589 5855 1 chr3B.!!$F1 1266
11 TraesCS5A01G405900 chrUn 26963495 26964754 1259 False 1688.000000 1688 90.830000 4592 5855 1 chrUn.!!$F1 1263
12 TraesCS5A01G405900 chrUn 243782911 243783484 573 True 981.000000 981 97.561000 7336 7907 1 chrUn.!!$R1 571
13 TraesCS5A01G405900 chrUn 388206483 388207056 573 False 981.000000 981 97.561000 7336 7907 1 chrUn.!!$F2 571
14 TraesCS5A01G405900 chr1B 625720443 625721014 571 True 994.000000 994 98.077000 7336 7905 1 chr1B.!!$R1 569
15 TraesCS5A01G405900 chr1B 647588864 647589437 573 False 992.000000 992 97.909000 7336 7907 1 chr1B.!!$F1 571
16 TraesCS5A01G405900 chr6A 1813209 1813781 572 True 985.000000 985 97.731000 7337 7907 1 chr6A.!!$R1 570
17 TraesCS5A01G405900 chr6B 92180145 92180718 573 False 981.000000 981 97.561000 7336 7907 1 chr6B.!!$F1 571
18 TraesCS5A01G405900 chr6B 101239892 101240464 572 True 979.000000 979 97.561000 7336 7907 1 chr6B.!!$R1 571
19 TraesCS5A01G405900 chr4B 535305760 535306331 571 True 979.000000 979 97.561000 7336 7907 1 chr4B.!!$R2 571
20 TraesCS5A01G405900 chr2A 740483 741056 573 True 976.000000 976 97.387000 7336 7907 1 chr2A.!!$R1 571

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
470 491 0.030101 TTTGCCGGCTCAGTTTTTCG 59.970 50.000 29.70 0.00 0.00 3.46 F
473 494 0.309612 GCCGGCTCAGTTTTTCGAAA 59.690 50.000 22.15 6.47 0.00 3.46 F
2355 2797 0.320050 TGGTGTTCAGCGCACATAGA 59.680 50.000 11.47 0.00 38.51 1.98 F
2705 3158 0.179018 GCTTGTGAGGTGTTCCTGGT 60.179 55.000 0.00 0.00 45.24 4.00 F
2724 3177 0.326595 TTCCGGCCATGCAAAGTCTA 59.673 50.000 2.24 0.00 0.00 2.59 F
3147 3603 0.933097 CATCGAAGTGGGAGCATTCG 59.067 55.000 0.00 0.38 45.37 3.34 F
4323 4818 1.136695 TGCCTGGAAACTGCACTTTTG 59.863 47.619 0.00 0.00 34.61 2.44 F
5308 5830 0.035152 TTCTAGGAGGCGTACACGGA 60.035 55.000 3.67 0.00 40.23 4.69 F
6193 6785 0.518195 TCTGCATGCACGAACACATG 59.482 50.000 18.46 3.63 45.19 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1807 2062 0.247185 ACATTTCCCAATGCGGCAAG 59.753 50.000 6.82 2.41 43.39 4.01 R
2445 2890 0.316772 GCGCGTCGAATCAGCTACTA 60.317 55.000 8.43 0.00 0.00 1.82 R
3711 4171 1.547372 GAATGTGACCATTTGCAGCCT 59.453 47.619 0.00 0.00 41.37 4.58 R
4572 5088 0.602638 GGCGGACGCATATCATCCAA 60.603 55.000 18.95 0.00 44.11 3.53 R
4573 5089 1.005037 GGCGGACGCATATCATCCA 60.005 57.895 18.95 0.00 44.11 3.41 R
4964 5483 0.250901 GTTGTCAGGACCACCATGCT 60.251 55.000 0.00 0.00 38.94 3.79 R
6143 6677 0.596341 CAAAAACACGCGGAAAGGGG 60.596 55.000 12.47 0.00 37.07 4.79 R
6405 7010 0.739112 GCTTCAGCTCCTTGTCCTCG 60.739 60.000 0.00 0.00 38.21 4.63 R
7507 8350 0.174845 CAACGTTATCGAGCCTCCCA 59.825 55.000 0.00 0.00 40.62 4.37 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 4.645588 AGCTATAGAGTGGTATTATCGGCC 59.354 45.833 3.21 0.00 0.00 6.13
107 108 5.850557 ATGATTTGTGAACCAACTTGTGA 57.149 34.783 0.00 0.00 31.20 3.58
109 110 5.830912 TGATTTGTGAACCAACTTGTGATC 58.169 37.500 0.00 0.00 31.20 2.92
121 122 6.070995 ACCAACTTGTGATCGGATAGTTAGAA 60.071 38.462 4.11 0.00 0.00 2.10
122 123 6.477033 CCAACTTGTGATCGGATAGTTAGAAG 59.523 42.308 4.11 2.87 0.00 2.85
124 125 5.069251 ACTTGTGATCGGATAGTTAGAAGGG 59.931 44.000 0.00 0.00 0.00 3.95
136 137 2.772515 GTTAGAAGGGCAGTGGTATCCT 59.227 50.000 0.00 0.00 0.00 3.24
137 138 1.972588 AGAAGGGCAGTGGTATCCTT 58.027 50.000 0.00 0.00 41.78 3.36
138 139 3.130734 AGAAGGGCAGTGGTATCCTTA 57.869 47.619 0.00 0.00 39.46 2.69
139 140 3.041946 AGAAGGGCAGTGGTATCCTTAG 58.958 50.000 0.00 0.00 39.46 2.18
140 141 1.132500 AGGGCAGTGGTATCCTTAGC 58.868 55.000 0.00 0.00 0.00 3.09
142 143 0.108774 GGCAGTGGTATCCTTAGCCC 59.891 60.000 0.00 0.00 34.71 5.19
143 144 0.837272 GCAGTGGTATCCTTAGCCCA 59.163 55.000 0.00 0.00 0.00 5.36
144 145 1.421646 GCAGTGGTATCCTTAGCCCAT 59.578 52.381 0.00 0.00 0.00 4.00
145 146 2.551071 GCAGTGGTATCCTTAGCCCATC 60.551 54.545 0.00 0.00 0.00 3.51
146 147 2.705658 CAGTGGTATCCTTAGCCCATCA 59.294 50.000 0.00 0.00 0.00 3.07
147 148 3.328931 CAGTGGTATCCTTAGCCCATCAT 59.671 47.826 0.00 0.00 0.00 2.45
151 152 5.013183 GTGGTATCCTTAGCCCATCATAGTT 59.987 44.000 0.00 0.00 0.00 2.24
157 158 5.059833 CCTTAGCCCATCATAGTTCAAGTC 58.940 45.833 0.00 0.00 0.00 3.01
158 159 5.396772 CCTTAGCCCATCATAGTTCAAGTCA 60.397 44.000 0.00 0.00 0.00 3.41
166 167 8.347771 CCCATCATAGTTCAAGTCATACATTTG 58.652 37.037 0.00 0.00 0.00 2.32
180 181 8.765219 AGTCATACATTTGACATTAATACTCGC 58.235 33.333 7.28 0.00 46.81 5.03
189 190 8.894409 TTGACATTAATACTCGCATTTTTCTG 57.106 30.769 0.00 0.00 0.00 3.02
190 191 8.262715 TGACATTAATACTCGCATTTTTCTGA 57.737 30.769 0.00 0.00 0.00 3.27
192 193 9.214953 GACATTAATACTCGCATTTTTCTGAAG 57.785 33.333 0.00 0.00 0.00 3.02
196 197 6.900568 ATACTCGCATTTTTCTGAAGAGAG 57.099 37.500 8.52 7.52 0.00 3.20
197 198 4.887748 ACTCGCATTTTTCTGAAGAGAGA 58.112 39.130 12.62 2.55 0.00 3.10
198 199 5.486526 ACTCGCATTTTTCTGAAGAGAGAT 58.513 37.500 12.62 0.00 0.00 2.75
199 200 5.350914 ACTCGCATTTTTCTGAAGAGAGATG 59.649 40.000 12.62 2.29 0.00 2.90
200 201 4.093998 TCGCATTTTTCTGAAGAGAGATGC 59.906 41.667 13.37 13.37 37.42 3.91
201 202 4.094590 CGCATTTTTCTGAAGAGAGATGCT 59.905 41.667 18.28 0.00 37.98 3.79
202 203 5.292834 CGCATTTTTCTGAAGAGAGATGCTA 59.707 40.000 18.28 0.00 37.98 3.49
203 204 6.509837 CGCATTTTTCTGAAGAGAGATGCTAG 60.510 42.308 18.28 6.08 37.98 3.42
204 205 6.538021 GCATTTTTCTGAAGAGAGATGCTAGA 59.462 38.462 15.18 0.00 37.59 2.43
205 206 7.465781 GCATTTTTCTGAAGAGAGATGCTAGAC 60.466 40.741 15.18 0.00 37.59 2.59
206 207 6.849085 TTTTCTGAAGAGAGATGCTAGACT 57.151 37.500 0.00 0.00 0.00 3.24
207 208 6.849085 TTTCTGAAGAGAGATGCTAGACTT 57.151 37.500 0.00 0.00 0.00 3.01
208 209 7.946381 TTTCTGAAGAGAGATGCTAGACTTA 57.054 36.000 0.00 0.00 0.00 2.24
209 210 6.935741 TCTGAAGAGAGATGCTAGACTTAC 57.064 41.667 0.00 0.00 0.00 2.34
210 211 5.525745 TCTGAAGAGAGATGCTAGACTTACG 59.474 44.000 0.00 0.00 0.00 3.18
211 212 5.429130 TGAAGAGAGATGCTAGACTTACGA 58.571 41.667 0.00 0.00 0.00 3.43
212 213 5.294799 TGAAGAGAGATGCTAGACTTACGAC 59.705 44.000 0.00 0.00 0.00 4.34
213 214 4.771903 AGAGAGATGCTAGACTTACGACA 58.228 43.478 0.00 0.00 0.00 4.35
214 215 4.814234 AGAGAGATGCTAGACTTACGACAG 59.186 45.833 0.00 0.00 0.00 3.51
215 216 3.880490 AGAGATGCTAGACTTACGACAGG 59.120 47.826 0.00 0.00 0.00 4.00
216 217 3.878103 GAGATGCTAGACTTACGACAGGA 59.122 47.826 0.00 0.00 0.00 3.86
217 218 4.465886 AGATGCTAGACTTACGACAGGAT 58.534 43.478 0.00 0.00 0.00 3.24
229 230 2.686915 ACGACAGGATTAGACTTACGGG 59.313 50.000 0.00 0.00 0.00 5.28
252 253 5.393787 GGATCACGTGTAGAGTTATGGTTGA 60.394 44.000 16.51 0.00 0.00 3.18
285 287 3.536570 GAGAAAAGGTCCCATCAGCTAC 58.463 50.000 0.00 0.00 0.00 3.58
289 291 4.322057 AAAGGTCCCATCAGCTACAATT 57.678 40.909 0.00 0.00 0.00 2.32
294 296 2.711009 TCCCATCAGCTACAATTAGGGG 59.289 50.000 0.00 0.00 35.74 4.79
295 297 2.443255 CCCATCAGCTACAATTAGGGGT 59.557 50.000 0.00 0.00 0.00 4.95
326 328 5.087323 TGGTGAGAGAGGAGTCTGTAAAAT 58.913 41.667 0.00 0.00 30.97 1.82
342 344 9.899226 GTCTGTAAAATCAATTTGTAGAAGCTT 57.101 29.630 0.00 0.00 30.86 3.74
354 356 8.597662 ATTTGTAGAAGCTTTTCGTAAGTGTA 57.402 30.769 0.00 0.00 39.48 2.90
355 357 7.633361 TTGTAGAAGCTTTTCGTAAGTGTAG 57.367 36.000 0.00 0.00 39.48 2.74
363 368 6.636850 AGCTTTTCGTAAGTGTAGCATTTTTG 59.363 34.615 0.00 0.00 37.32 2.44
366 371 8.690680 TTTTCGTAAGTGTAGCATTTTTGTTT 57.309 26.923 0.00 0.00 39.48 2.83
369 374 7.473366 TCGTAAGTGTAGCATTTTTGTTTTGA 58.527 30.769 0.00 0.00 39.48 2.69
381 386 9.384682 GCATTTTTGTTTTGAATGTATTTCAGG 57.615 29.630 0.00 0.00 44.90 3.86
425 446 3.365064 CCGTCGACTATGAATGCGTCTAT 60.365 47.826 14.70 0.00 0.00 1.98
428 449 2.663602 CGACTATGAATGCGTCTATGGC 59.336 50.000 0.00 0.00 0.00 4.40
435 456 0.459899 ATGCGTCTATGGCGACTTCA 59.540 50.000 0.00 0.00 0.00 3.02
446 467 8.345565 GTCTATGGCGACTTCATCAATTTTAAT 58.654 33.333 0.00 0.00 0.00 1.40
470 491 0.030101 TTTGCCGGCTCAGTTTTTCG 59.970 50.000 29.70 0.00 0.00 3.46
473 494 0.309612 GCCGGCTCAGTTTTTCGAAA 59.690 50.000 22.15 6.47 0.00 3.46
474 495 1.068541 GCCGGCTCAGTTTTTCGAAAT 60.069 47.619 22.15 0.00 0.00 2.17
476 497 3.638484 CCGGCTCAGTTTTTCGAAATTT 58.362 40.909 12.12 0.00 0.00 1.82
511 536 0.441921 TGTGCGTGCGTGTATTCATG 59.558 50.000 0.00 0.00 0.00 3.07
535 560 6.167685 GGGGATGTTTATACGTGCATATGTA 58.832 40.000 4.29 0.00 33.64 2.29
540 565 7.346208 TGTTTATACGTGCATATGTATGAGC 57.654 36.000 18.54 11.39 38.95 4.26
545 570 3.621268 ACGTGCATATGTATGAGCGTTTT 59.379 39.130 18.54 0.00 40.12 2.43
546 571 3.961860 CGTGCATATGTATGAGCGTTTTG 59.038 43.478 7.18 0.00 35.75 2.44
547 572 3.725740 GTGCATATGTATGAGCGTTTTGC 59.274 43.478 4.29 0.00 37.78 3.68
595 825 7.698130 GGTTACTATGATTTGCTAAAGTTGCTG 59.302 37.037 0.00 0.00 0.00 4.41
601 831 4.818534 TTTGCTAAAGTTGCTGTGAGAG 57.181 40.909 0.00 0.00 0.00 3.20
635 865 0.614979 AGATAGAGGGTGGTGCACGT 60.615 55.000 11.45 0.00 34.83 4.49
754 985 1.867233 GACGCAAGAAAGACAGCTTCA 59.133 47.619 0.00 0.00 43.62 3.02
901 1138 2.005370 AGTTTCGTCCTCCACCACTA 57.995 50.000 0.00 0.00 0.00 2.74
902 1139 1.617357 AGTTTCGTCCTCCACCACTAC 59.383 52.381 0.00 0.00 0.00 2.73
903 1140 1.617357 GTTTCGTCCTCCACCACTACT 59.383 52.381 0.00 0.00 0.00 2.57
918 1155 5.178438 CACCACTACTTCTCTTCTTTTCAGC 59.822 44.000 0.00 0.00 0.00 4.26
929 1168 4.999950 TCTTCTTTTCAGCAGAGTTCATCC 59.000 41.667 0.00 0.00 0.00 3.51
962 1201 2.876581 AGTTAGGGTTTCTTGGCCTTG 58.123 47.619 3.32 0.00 0.00 3.61
963 1202 2.177016 AGTTAGGGTTTCTTGGCCTTGT 59.823 45.455 3.32 0.00 0.00 3.16
964 1203 2.557056 GTTAGGGTTTCTTGGCCTTGTC 59.443 50.000 3.32 0.00 0.00 3.18
1543 1794 4.023450 TGTTCCTCGATACATACGATGGAC 60.023 45.833 0.00 0.00 39.02 4.02
1576 1831 2.793585 CGTGATGCCATGTGATGCTTTC 60.794 50.000 0.00 0.00 0.00 2.62
1807 2062 3.129871 CCGAGATGAGAAGATTCTTGGC 58.870 50.000 3.03 0.00 37.73 4.52
2034 2296 9.784531 AGCAGTATGTGAGTATTAAATTAGCAT 57.215 29.630 0.00 0.00 39.31 3.79
2096 2358 0.744874 CCAATCTCCGCCTCTCGTTA 59.255 55.000 0.00 0.00 36.19 3.18
2098 2360 2.224066 CCAATCTCCGCCTCTCGTTATT 60.224 50.000 0.00 0.00 36.19 1.40
2131 2393 9.607988 TTCGGCTCTCAGTTTATAATTAATCAA 57.392 29.630 0.00 0.00 0.00 2.57
2160 2422 4.481368 AGTAACACACTGTCTTCAACCA 57.519 40.909 0.00 0.00 35.62 3.67
2253 2519 3.418684 AGGGCTACAAAGTCGATTGTT 57.581 42.857 9.52 0.00 40.52 2.83
2276 2546 6.844696 TTCGGCAGTTTAATCATCTATGTC 57.155 37.500 0.00 0.00 0.00 3.06
2277 2547 6.161855 TCGGCAGTTTAATCATCTATGTCT 57.838 37.500 0.00 0.00 0.00 3.41
2278 2548 7.284919 TCGGCAGTTTAATCATCTATGTCTA 57.715 36.000 0.00 0.00 0.00 2.59
2280 2550 7.814587 TCGGCAGTTTAATCATCTATGTCTATG 59.185 37.037 0.00 0.00 0.00 2.23
2281 2551 7.600375 CGGCAGTTTAATCATCTATGTCTATGT 59.400 37.037 0.00 0.00 0.00 2.29
2283 2553 8.715998 GCAGTTTAATCATCTATGTCTATGTGG 58.284 37.037 0.00 0.00 0.00 4.17
2284 2554 9.770097 CAGTTTAATCATCTATGTCTATGTGGT 57.230 33.333 0.00 0.00 0.00 4.16
2291 2561 8.942338 TCATCTATGTCTATGTGGTTTAACAC 57.058 34.615 0.00 0.00 41.68 3.32
2334 2776 5.006746 GCACGAAGGAATTACATCAAGGTAG 59.993 44.000 0.00 0.00 0.00 3.18
2355 2797 0.320050 TGGTGTTCAGCGCACATAGA 59.680 50.000 11.47 0.00 38.51 1.98
2368 2810 5.807520 AGCGCACATAGAGATTATAAATCGG 59.192 40.000 11.47 0.00 0.00 4.18
2369 2811 5.805486 GCGCACATAGAGATTATAAATCGGA 59.195 40.000 0.30 0.00 0.00 4.55
2445 2890 1.279271 GGATGCAGAACACAGGGTACT 59.721 52.381 0.00 0.00 0.00 2.73
2446 2891 2.500098 GGATGCAGAACACAGGGTACTA 59.500 50.000 0.00 0.00 0.00 1.82
2447 2892 3.430929 GGATGCAGAACACAGGGTACTAG 60.431 52.174 0.00 0.00 0.00 2.57
2560 3005 0.663688 ATCGCCGCACTGTACTAGAG 59.336 55.000 0.00 0.00 0.00 2.43
2561 3006 1.586564 CGCCGCACTGTACTAGAGC 60.587 63.158 0.00 0.00 39.31 4.09
2584 3029 2.094854 ACGCCTACTGTTACTACACTGC 60.095 50.000 0.00 0.00 0.00 4.40
2595 3040 2.159819 CTACACTGCGCACCCTGTCT 62.160 60.000 5.66 0.00 0.00 3.41
2622 3067 1.304547 AGTCGGAGTGAGTGGGAGG 60.305 63.158 0.00 0.00 0.00 4.30
2640 3093 2.442272 GAGGGACGCCTAGCCTGA 60.442 66.667 0.00 0.00 0.00 3.86
2641 3094 2.038975 AGGGACGCCTAGCCTGAA 59.961 61.111 0.00 0.00 0.00 3.02
2642 3095 1.383248 AGGGACGCCTAGCCTGAAT 60.383 57.895 0.00 0.00 0.00 2.57
2643 3096 0.983378 AGGGACGCCTAGCCTGAATT 60.983 55.000 0.00 0.00 0.00 2.17
2644 3097 0.756903 GGGACGCCTAGCCTGAATTA 59.243 55.000 0.00 0.00 0.00 1.40
2645 3098 1.348036 GGGACGCCTAGCCTGAATTAT 59.652 52.381 0.00 0.00 0.00 1.28
2651 3104 4.096382 ACGCCTAGCCTGAATTATTTTGTG 59.904 41.667 0.00 0.00 0.00 3.33
2656 3109 7.035612 CCTAGCCTGAATTATTTTGTGGAAAC 58.964 38.462 0.00 0.00 0.00 2.78
2670 3123 8.600449 TTTTGTGGAAACAAATATTAGCAAGG 57.400 30.769 4.98 0.00 46.06 3.61
2675 3128 7.755373 GTGGAAACAAATATTAGCAAGGACTTC 59.245 37.037 0.00 0.00 46.06 3.01
2676 3129 7.450014 TGGAAACAAATATTAGCAAGGACTTCA 59.550 33.333 0.00 0.00 37.44 3.02
2677 3130 8.303876 GGAAACAAATATTAGCAAGGACTTCAA 58.696 33.333 0.00 0.00 0.00 2.69
2678 3131 9.691362 GAAACAAATATTAGCAAGGACTTCAAA 57.309 29.630 0.00 0.00 0.00 2.69
2681 3134 9.643693 ACAAATATTAGCAAGGACTTCAAAATG 57.356 29.630 0.00 0.00 0.00 2.32
2682 3135 9.643693 CAAATATTAGCAAGGACTTCAAAATGT 57.356 29.630 0.00 0.00 0.00 2.71
2686 3139 7.769272 TTAGCAAGGACTTCAAAATGTTTTG 57.231 32.000 11.07 11.07 46.70 2.44
2687 3140 4.571984 AGCAAGGACTTCAAAATGTTTTGC 59.428 37.500 12.21 0.00 45.35 3.68
2688 3141 4.571984 GCAAGGACTTCAAAATGTTTTGCT 59.428 37.500 12.21 2.47 45.35 3.91
2689 3142 5.065090 GCAAGGACTTCAAAATGTTTTGCTT 59.935 36.000 12.21 7.47 45.35 3.91
2690 3143 6.480285 CAAGGACTTCAAAATGTTTTGCTTG 58.520 36.000 12.21 13.79 45.35 4.01
2691 3144 5.733676 AGGACTTCAAAATGTTTTGCTTGT 58.266 33.333 12.21 10.30 45.35 3.16
2692 3145 5.581874 AGGACTTCAAAATGTTTTGCTTGTG 59.418 36.000 12.21 4.62 45.35 3.33
2693 3146 5.580297 GGACTTCAAAATGTTTTGCTTGTGA 59.420 36.000 12.21 0.00 45.35 3.58
2694 3147 6.237915 GGACTTCAAAATGTTTTGCTTGTGAG 60.238 38.462 12.21 6.65 45.35 3.51
2695 3148 5.581874 ACTTCAAAATGTTTTGCTTGTGAGG 59.418 36.000 12.21 0.00 45.35 3.86
2696 3149 5.083533 TCAAAATGTTTTGCTTGTGAGGT 57.916 34.783 12.21 0.00 45.35 3.85
2697 3150 4.869297 TCAAAATGTTTTGCTTGTGAGGTG 59.131 37.500 12.21 0.00 45.35 4.00
2698 3151 4.470334 AAATGTTTTGCTTGTGAGGTGT 57.530 36.364 0.00 0.00 0.00 4.16
2699 3152 4.470334 AATGTTTTGCTTGTGAGGTGTT 57.530 36.364 0.00 0.00 0.00 3.32
2700 3153 3.502191 TGTTTTGCTTGTGAGGTGTTC 57.498 42.857 0.00 0.00 0.00 3.18
2701 3154 2.165437 TGTTTTGCTTGTGAGGTGTTCC 59.835 45.455 0.00 0.00 0.00 3.62
2703 3156 1.679139 TTGCTTGTGAGGTGTTCCTG 58.321 50.000 0.00 0.00 45.24 3.86
2704 3157 0.179020 TGCTTGTGAGGTGTTCCTGG 60.179 55.000 0.00 0.00 45.24 4.45
2705 3158 0.179018 GCTTGTGAGGTGTTCCTGGT 60.179 55.000 0.00 0.00 45.24 4.00
2706 3159 1.750682 GCTTGTGAGGTGTTCCTGGTT 60.751 52.381 0.00 0.00 45.24 3.67
2707 3160 2.222027 CTTGTGAGGTGTTCCTGGTTC 58.778 52.381 0.00 0.00 45.24 3.62
2708 3161 0.472471 TGTGAGGTGTTCCTGGTTCC 59.528 55.000 0.00 0.00 45.24 3.62
2709 3162 0.602905 GTGAGGTGTTCCTGGTTCCG 60.603 60.000 0.00 0.00 45.24 4.30
2710 3163 1.003718 GAGGTGTTCCTGGTTCCGG 60.004 63.158 0.00 0.00 45.24 5.14
2711 3164 2.671963 GGTGTTCCTGGTTCCGGC 60.672 66.667 0.00 0.00 0.00 6.13
2712 3165 2.671963 GTGTTCCTGGTTCCGGCC 60.672 66.667 0.00 0.00 0.00 6.13
2713 3166 3.172106 TGTTCCTGGTTCCGGCCA 61.172 61.111 2.24 0.00 36.97 5.36
2714 3167 2.355115 GTTCCTGGTTCCGGCCAT 59.645 61.111 2.24 0.00 37.96 4.40
2715 3168 2.046285 GTTCCTGGTTCCGGCCATG 61.046 63.158 2.24 0.00 37.96 3.66
2724 3177 0.326595 TTCCGGCCATGCAAAGTCTA 59.673 50.000 2.24 0.00 0.00 2.59
2749 3202 1.878088 CTGAACATGCAGCTGTCTGTT 59.122 47.619 26.02 26.02 42.29 3.16
2750 3203 1.605232 TGAACATGCAGCTGTCTGTTG 59.395 47.619 28.91 16.83 42.29 3.33
2836 3289 5.702670 TGCTGAAGGAATGAAAACTGACTAG 59.297 40.000 0.00 0.00 0.00 2.57
2837 3290 5.703130 GCTGAAGGAATGAAAACTGACTAGT 59.297 40.000 0.00 0.00 39.32 2.57
2922 3375 7.376866 GGTCAAGATGTTAATCGTTATGCAATG 59.623 37.037 0.00 0.00 37.92 2.82
2923 3376 6.912051 TCAAGATGTTAATCGTTATGCAATGC 59.088 34.615 0.00 0.00 37.92 3.56
2924 3377 6.624352 AGATGTTAATCGTTATGCAATGCT 57.376 33.333 6.82 0.00 37.92 3.79
2925 3378 7.728847 AGATGTTAATCGTTATGCAATGCTA 57.271 32.000 6.82 0.00 37.92 3.49
2926 3379 7.576236 AGATGTTAATCGTTATGCAATGCTAC 58.424 34.615 6.82 1.30 37.92 3.58
2928 3384 7.315247 TGTTAATCGTTATGCAATGCTACTT 57.685 32.000 6.82 0.00 0.00 2.24
2929 3385 7.186128 TGTTAATCGTTATGCAATGCTACTTG 58.814 34.615 6.82 0.00 0.00 3.16
2955 3411 7.996098 TTTTTAGGGACTTCACCATTAAGAG 57.004 36.000 0.00 0.00 41.75 2.85
2956 3412 5.693769 TTAGGGACTTCACCATTAAGAGG 57.306 43.478 0.00 0.00 41.75 3.69
2957 3413 2.239907 AGGGACTTCACCATTAAGAGGC 59.760 50.000 0.00 0.00 27.25 4.70
2958 3414 2.644676 GGACTTCACCATTAAGAGGCC 58.355 52.381 0.00 0.00 0.00 5.19
2960 3416 3.536570 GACTTCACCATTAAGAGGCCTC 58.463 50.000 26.22 26.22 0.00 4.70
3147 3603 0.933097 CATCGAAGTGGGAGCATTCG 59.067 55.000 0.00 0.38 45.37 3.34
3150 3606 1.546923 TCGAAGTGGGAGCATTCGTAA 59.453 47.619 6.47 0.00 44.57 3.18
3151 3607 2.167693 TCGAAGTGGGAGCATTCGTAAT 59.832 45.455 6.47 0.00 44.57 1.89
3152 3608 2.936498 CGAAGTGGGAGCATTCGTAATT 59.064 45.455 0.00 0.00 40.58 1.40
3153 3609 3.374058 CGAAGTGGGAGCATTCGTAATTT 59.626 43.478 0.00 0.00 40.58 1.82
3154 3610 4.494199 CGAAGTGGGAGCATTCGTAATTTC 60.494 45.833 0.00 0.00 40.58 2.17
3155 3611 3.950397 AGTGGGAGCATTCGTAATTTCA 58.050 40.909 0.00 0.00 0.00 2.69
3158 3614 6.299141 AGTGGGAGCATTCGTAATTTCATAT 58.701 36.000 0.00 0.00 0.00 1.78
3189 3645 7.125792 AGAGGCCTCTTATTTCTTCGATTTA 57.874 36.000 30.40 0.00 36.31 1.40
3207 3663 7.351981 TCGATTTAATTTTGATCGTAGCCATG 58.648 34.615 13.73 0.00 42.29 3.66
3227 3683 6.638610 CCATGGAGCATTGTTAATTGGTTTA 58.361 36.000 5.56 0.00 0.00 2.01
3236 3692 9.824534 GCATTGTTAATTGGTTTAAGGATTTTG 57.175 29.630 0.00 0.00 30.46 2.44
3282 3738 4.587262 ACCCTTTTGTGACCCAAGTTATTC 59.413 41.667 0.00 0.00 33.75 1.75
3292 3748 3.244770 ACCCAAGTTATTCGATGTGTGGT 60.245 43.478 0.00 0.00 0.00 4.16
3596 4055 6.875195 AGACACTTGCCATTTTGAATTATTGG 59.125 34.615 0.00 0.00 0.00 3.16
3688 4148 9.624697 GAAAATTATGTAACTTGTGATGCAGAA 57.375 29.630 0.00 0.00 0.00 3.02
3795 4255 6.932901 ACATGCACGAAGTTTTTCATAATG 57.067 33.333 0.00 0.00 41.61 1.90
3853 4315 6.483640 GGTATAAAATGGGATCGGCTATCATC 59.516 42.308 1.18 0.00 36.20 2.92
3854 4316 4.647564 AAAATGGGATCGGCTATCATCT 57.352 40.909 1.18 0.00 36.20 2.90
3868 4330 6.313905 CGGCTATCATCTGGTTCCAAATATAC 59.686 42.308 0.00 0.00 0.00 1.47
3953 4448 8.443953 AAGTGCATTTATATCTTTCTCTCCAC 57.556 34.615 0.00 0.00 0.00 4.02
3960 4455 3.601443 ATCTTTCTCTCCACCGTCTTG 57.399 47.619 0.00 0.00 0.00 3.02
3969 4464 2.492088 CTCCACCGTCTTGTACATCTGA 59.508 50.000 0.00 0.00 0.00 3.27
3975 4470 4.097135 ACCGTCTTGTACATCTGATCTGAG 59.903 45.833 8.37 3.59 0.00 3.35
3978 4473 5.970612 CGTCTTGTACATCTGATCTGAGAAG 59.029 44.000 8.37 3.73 0.00 2.85
3981 4476 8.462811 GTCTTGTACATCTGATCTGAGAAGTTA 58.537 37.037 8.37 0.00 0.00 2.24
3987 4482 8.715191 ACATCTGATCTGAGAAGTTATTTCAC 57.285 34.615 8.37 0.00 38.31 3.18
4047 4542 6.790285 ATGGCAGTGATTTTGTTTGATTTC 57.210 33.333 0.00 0.00 0.00 2.17
4056 4551 4.797693 TTTGTTTGATTTCGTACGCTGA 57.202 36.364 11.24 0.00 0.00 4.26
4086 4581 5.009210 GTGGGCAAATTTCCCTTTTAAAACC 59.991 40.000 19.93 0.00 44.23 3.27
4097 4592 9.656040 TTTCCCTTTTAAAACCAAGTTAAAGTC 57.344 29.630 0.00 0.00 33.28 3.01
4109 4604 7.159372 ACCAAGTTAAAGTCCATGTACTGTAG 58.841 38.462 0.00 0.00 0.00 2.74
4123 4618 5.424757 TGTACTGTAGTTTGAACAGCTTGT 58.575 37.500 3.24 0.00 46.73 3.16
4157 4652 8.242053 AGATGTTCAAAAGAAAGTGATAGCATG 58.758 33.333 0.00 0.00 0.00 4.06
4215 4710 5.342259 CACTTGCTAACATAAAGAAAACGGC 59.658 40.000 0.00 0.00 0.00 5.68
4322 4817 1.484038 TGCCTGGAAACTGCACTTTT 58.516 45.000 0.00 0.00 34.61 2.27
4323 4818 1.136695 TGCCTGGAAACTGCACTTTTG 59.863 47.619 0.00 0.00 34.61 2.44
4337 4852 3.565902 GCACTTTTGCTATACATCCCTCC 59.434 47.826 0.00 0.00 46.17 4.30
4347 4862 6.181190 GCTATACATCCCTCCTTTAATTCCC 58.819 44.000 0.00 0.00 0.00 3.97
4387 4903 7.827819 TTCTCACTTGTTCTAACGGATATTG 57.172 36.000 0.00 0.00 0.00 1.90
4396 4912 7.383687 TGTTCTAACGGATATTGGGATATGTC 58.616 38.462 0.00 0.00 0.00 3.06
4397 4913 7.015779 TGTTCTAACGGATATTGGGATATGTCA 59.984 37.037 0.00 0.00 0.00 3.58
4416 4932 6.042638 TGTCAAACAACCCTTTCATTTTGA 57.957 33.333 0.00 0.00 32.08 2.69
4474 4990 5.114081 ACCTGGCACGTGTATAATTACTTC 58.886 41.667 18.38 0.00 0.00 3.01
4476 4992 6.097270 ACCTGGCACGTGTATAATTACTTCTA 59.903 38.462 18.38 0.00 0.00 2.10
4482 4998 9.903682 GCACGTGTATAATTACTTCTATTCCTA 57.096 33.333 18.38 0.00 0.00 2.94
4493 5009 8.935614 TTACTTCTATTCCTAGATGGATTCGA 57.064 34.615 0.00 0.00 45.68 3.71
4494 5010 7.222000 ACTTCTATTCCTAGATGGATTCGAC 57.778 40.000 0.00 0.00 45.68 4.20
4509 5025 5.424252 TGGATTCGACAGAATTAGGGTAGTT 59.576 40.000 0.00 0.00 46.30 2.24
4515 5031 5.749109 CGACAGAATTAGGGTAGTTTGCTAG 59.251 44.000 0.00 0.00 0.00 3.42
4523 5039 5.437191 AGGGTAGTTTGCTAGTTATTGCT 57.563 39.130 0.00 0.00 0.00 3.91
4527 5043 5.642063 GGTAGTTTGCTAGTTATTGCTCACA 59.358 40.000 0.00 0.00 0.00 3.58
4535 5051 1.541147 GTTATTGCTCACAAGGCTGCA 59.459 47.619 0.50 0.00 39.69 4.41
4565 5081 5.295540 GTGAAAGGCACTCCATTTCTCTATC 59.704 44.000 2.79 0.00 44.27 2.08
4566 5082 5.190528 TGAAAGGCACTCCATTTCTCTATCT 59.809 40.000 2.79 0.00 38.49 1.98
4567 5083 4.686191 AGGCACTCCATTTCTCTATCTG 57.314 45.455 0.00 0.00 33.74 2.90
4568 5084 3.390639 AGGCACTCCATTTCTCTATCTGG 59.609 47.826 0.00 0.00 33.74 3.86
4569 5085 3.135530 GGCACTCCATTTCTCTATCTGGT 59.864 47.826 0.00 0.00 0.00 4.00
4570 5086 4.125703 GCACTCCATTTCTCTATCTGGTG 58.874 47.826 0.00 0.00 0.00 4.17
4571 5087 4.383552 GCACTCCATTTCTCTATCTGGTGT 60.384 45.833 0.00 0.00 36.27 4.16
4572 5088 5.738909 CACTCCATTTCTCTATCTGGTGTT 58.261 41.667 0.00 0.00 34.27 3.32
4573 5089 6.176183 CACTCCATTTCTCTATCTGGTGTTT 58.824 40.000 0.00 0.00 34.27 2.83
4574 5090 6.093219 CACTCCATTTCTCTATCTGGTGTTTG 59.907 42.308 0.00 0.00 34.27 2.93
4575 5091 5.500234 TCCATTTCTCTATCTGGTGTTTGG 58.500 41.667 0.00 0.00 0.00 3.28
4576 5092 5.250543 TCCATTTCTCTATCTGGTGTTTGGA 59.749 40.000 0.00 0.00 0.00 3.53
4577 5093 6.069440 TCCATTTCTCTATCTGGTGTTTGGAT 60.069 38.462 0.00 0.00 0.00 3.41
4578 5094 6.039047 CCATTTCTCTATCTGGTGTTTGGATG 59.961 42.308 0.00 0.00 0.00 3.51
4579 5095 6.373005 TTTCTCTATCTGGTGTTTGGATGA 57.627 37.500 0.00 0.00 0.00 2.92
4580 5096 6.566079 TTCTCTATCTGGTGTTTGGATGAT 57.434 37.500 0.00 0.00 0.00 2.45
4581 5097 7.675161 TTCTCTATCTGGTGTTTGGATGATA 57.325 36.000 0.00 0.00 0.00 2.15
4582 5098 7.862274 TCTCTATCTGGTGTTTGGATGATAT 57.138 36.000 0.00 0.00 0.00 1.63
4583 5099 7.674120 TCTCTATCTGGTGTTTGGATGATATG 58.326 38.462 0.00 0.00 0.00 1.78
4584 5100 6.233434 TCTATCTGGTGTTTGGATGATATGC 58.767 40.000 0.00 0.00 0.00 3.14
4585 5101 3.205338 TCTGGTGTTTGGATGATATGCG 58.795 45.455 0.00 0.00 0.00 4.73
4586 5102 2.945008 CTGGTGTTTGGATGATATGCGT 59.055 45.455 0.00 0.00 0.00 5.24
4587 5103 2.942376 TGGTGTTTGGATGATATGCGTC 59.058 45.455 0.00 0.00 0.00 5.19
4684 5201 2.039624 GTCCTCTCTCCCCTGCCA 59.960 66.667 0.00 0.00 0.00 4.92
4908 5426 2.276116 GGCCCAGATCGCGGATCTA 61.276 63.158 16.93 0.00 46.25 1.98
4933 5451 4.473520 CCAGATGGGCTTCGGCGT 62.474 66.667 6.85 0.00 42.91 5.68
4964 5483 0.464916 TGGTGAGCGTCTATAGGCGA 60.465 55.000 29.86 6.73 41.40 5.54
4974 5493 0.681733 CTATAGGCGAGCATGGTGGT 59.318 55.000 0.00 0.00 0.00 4.16
4981 5500 1.679311 GAGCATGGTGGTCCTGACA 59.321 57.895 0.00 0.00 38.84 3.58
5102 5624 2.551270 AGTTGCTTGATGGAGGTCCTA 58.449 47.619 0.00 0.00 36.82 2.94
5104 5626 4.298626 AGTTGCTTGATGGAGGTCCTATA 58.701 43.478 0.00 0.00 36.82 1.31
5254 5776 1.379443 AGTAGATCGGGTGACGGCA 60.379 57.895 0.00 0.00 44.45 5.69
5255 5777 0.968901 AGTAGATCGGGTGACGGCAA 60.969 55.000 0.00 0.00 44.45 4.52
5272 5794 0.521659 CAACGCGTTGGTGTCGTTTT 60.522 50.000 37.79 4.85 43.45 2.43
5293 5815 0.619255 TCCTTGGGGGCGTCATTCTA 60.619 55.000 0.00 0.00 34.39 2.10
5308 5830 0.035152 TTCTAGGAGGCGTACACGGA 60.035 55.000 3.67 0.00 40.23 4.69
5310 5832 0.813184 CTAGGAGGCGTACACGGAAA 59.187 55.000 3.67 0.00 40.23 3.13
5340 5862 2.282180 GGGCGGCTTTCTTGGTGA 60.282 61.111 9.56 0.00 0.00 4.02
5343 5865 0.889186 GGCGGCTTTCTTGGTGAAGA 60.889 55.000 0.00 0.00 36.36 2.87
5371 5893 5.337578 TTCATCCTACACATTGATGACGA 57.662 39.130 0.00 0.00 43.24 4.20
5381 5903 1.375551 TTGATGACGACGGATCTCGA 58.624 50.000 10.96 0.00 42.43 4.04
5406 5928 4.803426 GCGCAGTGGAGACTCGGG 62.803 72.222 0.30 0.00 0.00 5.14
5452 5974 3.138798 GGAGGACGGCGCTGTCTA 61.139 66.667 39.75 0.00 38.91 2.59
5498 6020 0.614979 AGACCTGGCACGGTAGATGT 60.615 55.000 8.34 0.00 35.59 3.06
5500 6022 1.067212 GACCTGGCACGGTAGATGTAG 59.933 57.143 8.34 0.00 35.59 2.74
5506 6028 2.296471 GGCACGGTAGATGTAGCAGTAT 59.704 50.000 0.00 0.00 0.00 2.12
5586 6109 3.390521 TTGAGGAGTGCGCCGGAT 61.391 61.111 5.05 0.00 0.00 4.18
5677 6200 3.118738 CGAGGTCTGTTTGGTATTAGGCT 60.119 47.826 0.00 0.00 0.00 4.58
5717 6240 6.071984 CCTACATCAACTGGATAGGAGTAGT 58.928 44.000 0.00 0.00 34.78 2.73
5845 6375 2.709992 GGGGTCCTCCTCCATTTCA 58.290 57.895 0.00 0.00 35.33 2.69
5942 6472 4.463539 TGCACCTTACTCAATGATGCAAAT 59.536 37.500 4.68 0.00 38.56 2.32
5976 6506 6.462768 GCATGGTTGAAATATGCCTCCATTTA 60.463 38.462 0.00 0.00 40.89 1.40
6018 6548 5.971202 CAGTAACCATTTTCAGTTCACACAC 59.029 40.000 0.00 0.00 0.00 3.82
6036 6566 8.534333 TCACACACTTCTAATTAAGATGACAC 57.466 34.615 0.00 0.00 34.30 3.67
6043 6573 9.256228 ACTTCTAATTAAGATGACACCTCACTA 57.744 33.333 0.00 0.00 34.30 2.74
6091 6621 5.736777 GCATGCATTTGTGTGGCTGATATTA 60.737 40.000 14.21 0.00 0.00 0.98
6142 6676 6.884280 CTTCTATTTGTTGAAGTGGTCCTT 57.116 37.500 0.00 0.00 36.04 3.36
6163 6755 0.596341 CCCTTTCCGCGTGTTTTTGG 60.596 55.000 4.92 0.00 0.00 3.28
6190 6782 3.546815 GGATATTCTGCATGCACGAACAC 60.547 47.826 25.00 19.60 0.00 3.32
6191 6783 1.237533 ATTCTGCATGCACGAACACA 58.762 45.000 25.00 11.21 0.00 3.72
6192 6784 1.237533 TTCTGCATGCACGAACACAT 58.762 45.000 18.46 0.00 0.00 3.21
6193 6785 0.518195 TCTGCATGCACGAACACATG 59.482 50.000 18.46 3.63 45.19 3.21
6219 6811 6.821160 CACCTTTTGAAATTAAACCAGGTGTT 59.179 34.615 12.31 0.00 40.44 3.32
6236 6828 7.122650 ACCAGGTGTTATGTATTTTCAATCCAG 59.877 37.037 0.00 0.00 0.00 3.86
6248 6840 6.560253 TTTTCAATCCAGTTAAGAGCACTC 57.440 37.500 0.00 0.00 0.00 3.51
6258 6850 6.410540 CAGTTAAGAGCACTCCTATTTTCCT 58.589 40.000 0.00 0.00 0.00 3.36
6271 6863 3.710209 ATTTTCCTGAGTGGTCCAGAG 57.290 47.619 0.00 0.00 37.07 3.35
6272 6864 2.103153 TTTCCTGAGTGGTCCAGAGT 57.897 50.000 0.00 0.00 37.07 3.24
6273 6865 1.633774 TTCCTGAGTGGTCCAGAGTC 58.366 55.000 0.00 0.00 37.07 3.36
6274 6866 0.780637 TCCTGAGTGGTCCAGAGTCT 59.219 55.000 0.00 0.00 37.07 3.24
6275 6867 1.181786 CCTGAGTGGTCCAGAGTCTC 58.818 60.000 0.00 0.00 33.65 3.36
6276 6868 1.181786 CTGAGTGGTCCAGAGTCTCC 58.818 60.000 0.00 0.00 33.65 3.71
6277 6869 0.780637 TGAGTGGTCCAGAGTCTCCT 59.219 55.000 0.00 0.00 0.00 3.69
6278 6870 1.181786 GAGTGGTCCAGAGTCTCCTG 58.818 60.000 0.00 0.00 0.00 3.86
6279 6871 0.780637 AGTGGTCCAGAGTCTCCTGA 59.219 55.000 0.00 0.00 36.29 3.86
6280 6872 1.148027 AGTGGTCCAGAGTCTCCTGAA 59.852 52.381 0.00 0.00 36.29 3.02
6281 6873 2.183679 GTGGTCCAGAGTCTCCTGAAT 58.816 52.381 0.00 0.00 36.29 2.57
6282 6874 2.093764 GTGGTCCAGAGTCTCCTGAATG 60.094 54.545 0.00 0.00 36.29 2.67
6283 6875 2.225369 TGGTCCAGAGTCTCCTGAATGA 60.225 50.000 0.00 0.00 36.29 2.57
6284 6876 2.834549 GGTCCAGAGTCTCCTGAATGAA 59.165 50.000 0.00 0.00 36.29 2.57
6285 6877 3.454082 GGTCCAGAGTCTCCTGAATGAAT 59.546 47.826 0.00 0.00 36.29 2.57
6286 6878 4.080638 GGTCCAGAGTCTCCTGAATGAATT 60.081 45.833 0.00 0.00 36.29 2.17
6287 6879 5.115480 GTCCAGAGTCTCCTGAATGAATTC 58.885 45.833 0.00 0.00 36.29 2.17
6288 6880 5.028802 TCCAGAGTCTCCTGAATGAATTCT 58.971 41.667 7.05 0.00 37.67 2.40
6289 6881 5.486775 TCCAGAGTCTCCTGAATGAATTCTT 59.513 40.000 7.05 0.00 37.67 2.52
6290 6882 6.669591 TCCAGAGTCTCCTGAATGAATTCTTA 59.330 38.462 7.05 0.00 37.67 2.10
6312 6904 2.176045 GGGAACGGGACCATCATTTTT 58.824 47.619 0.00 0.00 0.00 1.94
6313 6905 2.094234 GGGAACGGGACCATCATTTTTG 60.094 50.000 0.00 0.00 0.00 2.44
6332 6934 1.403323 TGTTTTGTGATGCGCAGACAA 59.597 42.857 25.82 25.82 0.00 3.18
6405 7010 4.593864 GAGATCGACCCCAGCGCC 62.594 72.222 2.29 0.00 0.00 6.53
6450 7055 1.887707 GCTGAGGAAATACGGCGGG 60.888 63.158 13.24 0.00 0.00 6.13
6456 7061 0.871592 GGAAATACGGCGGGTACGTC 60.872 60.000 13.24 0.16 44.37 4.34
6486 7091 2.684843 CCAGGAGTTCTGCAAGCGC 61.685 63.158 0.00 0.00 42.05 5.92
6623 7232 3.697542 TGAATTTCTCGGATAGGTGTCGA 59.302 43.478 0.00 0.00 0.00 4.20
6629 7238 1.354506 GGATAGGTGTCGACGTCGG 59.645 63.158 35.05 18.25 40.29 4.79
6631 7240 1.290203 GATAGGTGTCGACGTCGGTA 58.710 55.000 35.05 22.22 40.29 4.02
6632 7241 1.665679 GATAGGTGTCGACGTCGGTAA 59.334 52.381 35.05 19.32 40.29 2.85
6633 7242 1.737838 TAGGTGTCGACGTCGGTAAT 58.262 50.000 35.05 20.26 40.29 1.89
6831 7446 3.706373 GGCGTCAGCTTCCTCCCA 61.706 66.667 0.00 0.00 44.37 4.37
6835 7450 2.123632 TCAGCTTCCTCCCAGCCT 59.876 61.111 0.00 0.00 38.09 4.58
7019 7644 4.143326 CGTAACGTACTTAGTCTGACGACA 60.143 45.833 12.29 0.00 42.73 4.35
7075 7700 3.551890 CCATATATATCTGCCGTTCACGC 59.448 47.826 0.00 0.00 38.18 5.34
7104 7729 7.749666 ACATGTCTGCCAAGTAGGAAATATAT 58.250 34.615 0.00 0.00 41.22 0.86
7192 8027 2.298300 CATGCGAAGTCGTTGTTTCAC 58.702 47.619 2.25 0.00 42.22 3.18
7196 8031 1.004292 CGAAGTCGTTGTTTCACCACC 60.004 52.381 0.00 0.00 34.11 4.61
7239 8074 1.760192 AATGGCAAGTCAGATCAGGC 58.240 50.000 0.00 0.00 0.00 4.85
7258 8100 1.571919 CGTACTGCTTCTACATGCCC 58.428 55.000 0.00 0.00 0.00 5.36
7266 8108 1.686325 TTCTACATGCCCGGCTCCTC 61.686 60.000 11.61 0.00 0.00 3.71
7288 8130 7.654923 TCCTCTCATCATCAACAGATAAATTCG 59.345 37.037 0.00 0.00 0.00 3.34
7292 8134 6.260714 TCATCATCAACAGATAAATTCGTGGG 59.739 38.462 0.00 0.00 0.00 4.61
7491 8334 8.079211 TGAGAGCCAAATAGTAGTCTAACATT 57.921 34.615 0.00 0.00 0.00 2.71
7504 8347 2.775384 TCTAACATTCCCCCGCAGTATT 59.225 45.455 0.00 0.00 0.00 1.89
7507 8350 3.876309 ACATTCCCCCGCAGTATTAAT 57.124 42.857 0.00 0.00 0.00 1.40
7786 8630 2.962569 TCGGAGAGCAACTGACGG 59.037 61.111 0.00 0.00 0.00 4.79
7808 8652 1.270518 GCCAGATCGTATCAGCCACAT 60.271 52.381 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 6.016943 GGCCGATAATACCACTCTATAGCTAG 60.017 46.154 0.00 0.00 0.00 3.42
39 40 6.525578 TTGGCCGATAATACCACTCTATAG 57.474 41.667 0.00 0.00 31.83 1.31
56 57 7.769272 ACAATTGATATGTTAATTTTGGCCG 57.231 32.000 13.59 0.00 0.00 6.13
93 94 2.920724 TCCGATCACAAGTTGGTTCA 57.079 45.000 7.96 0.00 0.00 3.18
94 95 4.504858 ACTATCCGATCACAAGTTGGTTC 58.495 43.478 7.96 0.22 0.00 3.62
107 108 3.322254 CACTGCCCTTCTAACTATCCGAT 59.678 47.826 0.00 0.00 0.00 4.18
109 110 2.224066 CCACTGCCCTTCTAACTATCCG 60.224 54.545 0.00 0.00 0.00 4.18
121 122 1.132500 GCTAAGGATACCACTGCCCT 58.868 55.000 0.00 0.00 37.17 5.19
122 123 0.108774 GGCTAAGGATACCACTGCCC 59.891 60.000 0.00 0.00 31.59 5.36
124 125 0.837272 TGGGCTAAGGATACCACTGC 59.163 55.000 0.00 0.00 37.17 4.40
136 137 5.692115 TGACTTGAACTATGATGGGCTAA 57.308 39.130 0.00 0.00 0.00 3.09
137 138 5.894298 ATGACTTGAACTATGATGGGCTA 57.106 39.130 0.00 0.00 0.00 3.93
138 139 4.785346 ATGACTTGAACTATGATGGGCT 57.215 40.909 0.00 0.00 0.00 5.19
139 140 5.368145 TGTATGACTTGAACTATGATGGGC 58.632 41.667 0.00 0.00 0.00 5.36
140 141 8.347771 CAAATGTATGACTTGAACTATGATGGG 58.652 37.037 0.00 0.00 0.00 4.00
142 143 9.926751 GTCAAATGTATGACTTGAACTATGATG 57.073 33.333 0.38 0.00 44.98 3.07
157 158 9.882996 AATGCGAGTATTAATGTCAAATGTATG 57.117 29.630 0.00 0.00 0.00 2.39
166 167 9.214953 CTTCAGAAAAATGCGAGTATTAATGTC 57.785 33.333 0.00 0.00 0.00 3.06
172 173 7.099764 TCTCTCTTCAGAAAAATGCGAGTATT 58.900 34.615 0.00 0.00 0.00 1.89
175 176 4.887748 TCTCTCTTCAGAAAAATGCGAGT 58.112 39.130 0.00 0.00 0.00 4.18
180 181 7.765360 AGTCTAGCATCTCTCTTCAGAAAAATG 59.235 37.037 0.00 0.00 0.00 2.32
187 188 5.525745 TCGTAAGTCTAGCATCTCTCTTCAG 59.474 44.000 0.00 0.00 39.48 3.02
189 190 5.294799 TGTCGTAAGTCTAGCATCTCTCTTC 59.705 44.000 0.00 0.00 39.48 2.87
190 191 5.186942 TGTCGTAAGTCTAGCATCTCTCTT 58.813 41.667 0.00 0.00 39.48 2.85
192 193 4.024387 CCTGTCGTAAGTCTAGCATCTCTC 60.024 50.000 0.00 0.00 39.48 3.20
196 197 4.839668 ATCCTGTCGTAAGTCTAGCATC 57.160 45.455 0.00 0.00 39.48 3.91
197 198 6.016943 GTCTAATCCTGTCGTAAGTCTAGCAT 60.017 42.308 0.00 0.00 39.48 3.79
198 199 5.296283 GTCTAATCCTGTCGTAAGTCTAGCA 59.704 44.000 0.00 0.00 39.48 3.49
199 200 5.528320 AGTCTAATCCTGTCGTAAGTCTAGC 59.472 44.000 0.00 0.00 39.48 3.42
200 201 7.556733 AAGTCTAATCCTGTCGTAAGTCTAG 57.443 40.000 0.00 0.00 39.48 2.43
201 202 7.223582 CGTAAGTCTAATCCTGTCGTAAGTCTA 59.776 40.741 0.00 0.00 39.48 2.59
202 203 6.036953 CGTAAGTCTAATCCTGTCGTAAGTCT 59.963 42.308 0.00 0.00 39.48 3.24
203 204 6.190962 CGTAAGTCTAATCCTGTCGTAAGTC 58.809 44.000 0.00 0.00 39.48 3.01
204 205 5.065731 CCGTAAGTCTAATCCTGTCGTAAGT 59.934 44.000 0.00 0.00 39.48 2.24
205 206 5.505324 CCCGTAAGTCTAATCCTGTCGTAAG 60.505 48.000 0.00 0.00 0.00 2.34
206 207 4.336433 CCCGTAAGTCTAATCCTGTCGTAA 59.664 45.833 0.00 0.00 0.00 3.18
207 208 3.879295 CCCGTAAGTCTAATCCTGTCGTA 59.121 47.826 0.00 0.00 0.00 3.43
208 209 2.686915 CCCGTAAGTCTAATCCTGTCGT 59.313 50.000 0.00 0.00 0.00 4.34
209 210 2.947652 TCCCGTAAGTCTAATCCTGTCG 59.052 50.000 0.00 0.00 0.00 4.35
210 211 4.583489 TGATCCCGTAAGTCTAATCCTGTC 59.417 45.833 0.00 0.00 0.00 3.51
211 212 4.341520 GTGATCCCGTAAGTCTAATCCTGT 59.658 45.833 0.00 0.00 0.00 4.00
212 213 4.556898 CGTGATCCCGTAAGTCTAATCCTG 60.557 50.000 0.00 0.00 0.00 3.86
213 214 3.568853 CGTGATCCCGTAAGTCTAATCCT 59.431 47.826 0.00 0.00 0.00 3.24
214 215 3.317430 ACGTGATCCCGTAAGTCTAATCC 59.683 47.826 0.00 0.00 39.73 3.01
215 216 4.201990 ACACGTGATCCCGTAAGTCTAATC 60.202 45.833 25.01 0.00 39.45 1.75
216 217 3.698040 ACACGTGATCCCGTAAGTCTAAT 59.302 43.478 25.01 0.00 39.45 1.73
217 218 3.084039 ACACGTGATCCCGTAAGTCTAA 58.916 45.455 25.01 0.00 39.45 2.10
229 230 5.647589 TCAACCATAACTCTACACGTGATC 58.352 41.667 25.01 0.00 0.00 2.92
252 253 6.045577 TGGGACCTTTTCTCCTTAATCTTCTT 59.954 38.462 0.00 0.00 0.00 2.52
262 264 1.283321 GCTGATGGGACCTTTTCTCCT 59.717 52.381 0.00 0.00 0.00 3.69
269 271 4.141390 CCTAATTGTAGCTGATGGGACCTT 60.141 45.833 0.00 0.00 0.00 3.50
285 287 1.899142 CCAACCAACCACCCCTAATTG 59.101 52.381 0.00 0.00 0.00 2.32
289 291 0.698198 TCACCAACCAACCACCCCTA 60.698 55.000 0.00 0.00 0.00 3.53
294 296 1.543429 CCTCTCTCACCAACCAACCAC 60.543 57.143 0.00 0.00 0.00 4.16
295 297 0.764890 CCTCTCTCACCAACCAACCA 59.235 55.000 0.00 0.00 0.00 3.67
326 328 8.067784 CACTTACGAAAAGCTTCTACAAATTGA 58.932 33.333 0.00 0.00 0.00 2.57
342 344 8.587950 CAAAACAAAAATGCTACACTTACGAAA 58.412 29.630 0.00 0.00 0.00 3.46
366 371 5.406526 CCGGAAGGCCTGAAATACATTCAA 61.407 45.833 5.69 0.00 46.25 2.69
399 420 2.601314 CGCATTCATAGTCGACGGAAAA 59.399 45.455 19.17 10.47 0.00 2.29
425 446 8.219546 TCATATTAAAATTGATGAAGTCGCCA 57.780 30.769 0.00 0.00 0.00 5.69
435 456 7.444299 AGCCGGCAAATCATATTAAAATTGAT 58.556 30.769 31.54 0.00 0.00 2.57
446 467 2.418368 AACTGAGCCGGCAAATCATA 57.582 45.000 31.54 5.14 0.00 2.15
470 491 8.131731 GCACACCCTATTCTTATGAGAAATTTC 58.868 37.037 10.33 10.33 44.61 2.17
473 494 5.760253 CGCACACCCTATTCTTATGAGAAAT 59.240 40.000 3.79 0.00 44.61 2.17
474 495 5.116180 CGCACACCCTATTCTTATGAGAAA 58.884 41.667 3.79 0.00 44.61 2.52
476 497 3.704566 ACGCACACCCTATTCTTATGAGA 59.295 43.478 0.00 0.00 0.00 3.27
485 506 2.032634 CACGCACGCACACCCTATT 61.033 57.895 0.00 0.00 0.00 1.73
511 536 5.001232 ACATATGCACGTATAAACATCCCC 58.999 41.667 1.58 0.00 0.00 4.81
569 594 7.698130 CAGCAACTTTAGCAAATCATAGTAACC 59.302 37.037 0.00 0.00 0.00 2.85
571 596 8.236586 CACAGCAACTTTAGCAAATCATAGTAA 58.763 33.333 0.00 0.00 0.00 2.24
573 598 6.430925 TCACAGCAACTTTAGCAAATCATAGT 59.569 34.615 0.00 0.00 0.00 2.12
574 599 6.845302 TCACAGCAACTTTAGCAAATCATAG 58.155 36.000 0.00 0.00 0.00 2.23
576 601 5.474532 TCTCACAGCAACTTTAGCAAATCAT 59.525 36.000 0.00 0.00 0.00 2.45
577 602 4.821260 TCTCACAGCAACTTTAGCAAATCA 59.179 37.500 0.00 0.00 0.00 2.57
754 985 7.348815 TCCCATGTCAAATCATGAGTAAAGAT 58.651 34.615 0.09 0.00 45.41 2.40
901 1138 5.289083 ACTCTGCTGAAAAGAAGAGAAGT 57.711 39.130 16.13 0.00 42.86 3.01
902 1139 5.757320 TGAACTCTGCTGAAAAGAAGAGAAG 59.243 40.000 16.13 0.00 42.86 2.85
903 1140 5.674525 TGAACTCTGCTGAAAAGAAGAGAA 58.325 37.500 16.13 0.90 42.86 2.87
918 1155 3.181456 GGAAGGAGATGGGATGAACTCTG 60.181 52.174 0.00 0.00 0.00 3.35
929 1168 3.930035 ACCCTAACTAGGAAGGAGATGG 58.070 50.000 12.91 0.75 46.63 3.51
962 1201 3.734231 TCGACAAATCAAGAACAGACGAC 59.266 43.478 0.00 0.00 0.00 4.34
963 1202 3.972403 TCGACAAATCAAGAACAGACGA 58.028 40.909 0.00 0.00 0.00 4.20
964 1203 4.910746 ATCGACAAATCAAGAACAGACG 57.089 40.909 0.00 0.00 0.00 4.18
1375 1626 5.175856 CCGACCTATAAGAGAAAGCAAATCG 59.824 44.000 0.00 0.00 0.00 3.34
1543 1794 2.507102 ATCACGCGACGAGCTTGG 60.507 61.111 15.93 0.00 44.25 3.61
1576 1831 3.021695 TCGGAATCAGTACAGGTACAGG 58.978 50.000 11.78 4.11 38.48 4.00
1807 2062 0.247185 ACATTTCCCAATGCGGCAAG 59.753 50.000 6.82 2.41 43.39 4.01
2034 2296 4.615223 GCTCGTGATGCATATTACTACGGA 60.615 45.833 0.00 0.00 0.00 4.69
2131 2393 5.552870 AGACAGTGTGTTACTTCCAATCT 57.447 39.130 0.00 0.00 37.60 2.40
2160 2422 6.240894 TGCTGAACCAAAGATGAACTCTAAT 58.759 36.000 0.00 0.00 32.41 1.73
2231 2497 3.858247 ACAATCGACTTTGTAGCCCTAC 58.142 45.455 2.58 0.00 38.04 3.18
2253 2519 6.582636 AGACATAGATGATTAAACTGCCGAA 58.417 36.000 0.00 0.00 0.00 4.30
2288 2558 4.863131 GCTAGCTGATTAAACAGTACGTGT 59.137 41.667 7.70 0.00 43.24 4.49
2289 2559 4.862574 TGCTAGCTGATTAAACAGTACGTG 59.137 41.667 17.23 2.94 39.73 4.49
2290 2560 4.863131 GTGCTAGCTGATTAAACAGTACGT 59.137 41.667 17.23 0.00 39.73 3.57
2291 2561 4.027621 CGTGCTAGCTGATTAAACAGTACG 60.028 45.833 17.23 8.56 39.73 3.67
2346 2788 7.993821 ATCCGATTTATAATCTCTATGTGCG 57.006 36.000 0.00 0.00 0.00 5.34
2368 2810 4.582240 AGGCCGGTTGTTAGTACTAGTATC 59.418 45.833 5.75 0.38 0.00 2.24
2369 2811 4.540715 AGGCCGGTTGTTAGTACTAGTAT 58.459 43.478 5.75 0.00 0.00 2.12
2445 2890 0.316772 GCGCGTCGAATCAGCTACTA 60.317 55.000 8.43 0.00 0.00 1.82
2446 2891 1.586564 GCGCGTCGAATCAGCTACT 60.587 57.895 8.43 0.00 0.00 2.57
2447 2892 2.906719 CGCGCGTCGAATCAGCTAC 61.907 63.158 24.19 0.00 41.67 3.58
2506 2951 1.934220 TACTCGCGGAGGCACAGAAG 61.934 60.000 6.13 0.00 39.92 2.85
2560 3005 1.131126 TGTAGTAACAGTAGGCGTCGC 59.869 52.381 9.22 9.22 0.00 5.19
2561 3006 2.417933 AGTGTAGTAACAGTAGGCGTCG 59.582 50.000 0.00 0.00 37.51 5.12
2584 3029 0.951040 GGACAAAGAGACAGGGTGCG 60.951 60.000 0.00 0.00 0.00 5.34
2595 3040 1.613925 CTCACTCCGACTGGACAAAGA 59.386 52.381 0.00 0.00 40.17 2.52
2618 3063 2.522193 CTAGGCGTCCCTCCCTCC 60.522 72.222 0.00 0.00 41.75 4.30
2622 3067 3.541713 CAGGCTAGGCGTCCCTCC 61.542 72.222 11.10 0.00 41.75 4.30
2634 3087 6.418057 TGTTTCCACAAAATAATTCAGGCT 57.582 33.333 0.00 0.00 0.00 4.58
2651 3104 7.826690 TGAAGTCCTTGCTAATATTTGTTTCC 58.173 34.615 0.00 0.00 0.00 3.13
2656 3109 9.643693 ACATTTTGAAGTCCTTGCTAATATTTG 57.356 29.630 0.00 0.00 0.00 2.32
2676 3129 4.831107 ACACCTCACAAGCAAAACATTTT 58.169 34.783 0.00 0.00 0.00 1.82
2677 3130 4.470334 ACACCTCACAAGCAAAACATTT 57.530 36.364 0.00 0.00 0.00 2.32
2678 3131 4.432712 GAACACCTCACAAGCAAAACATT 58.567 39.130 0.00 0.00 0.00 2.71
2679 3132 3.181476 GGAACACCTCACAAGCAAAACAT 60.181 43.478 0.00 0.00 0.00 2.71
2680 3133 2.165437 GGAACACCTCACAAGCAAAACA 59.835 45.455 0.00 0.00 0.00 2.83
2681 3134 2.427095 AGGAACACCTCACAAGCAAAAC 59.573 45.455 0.00 0.00 0.00 2.43
2682 3135 2.426738 CAGGAACACCTCACAAGCAAAA 59.573 45.455 0.00 0.00 30.75 2.44
2683 3136 2.023673 CAGGAACACCTCACAAGCAAA 58.976 47.619 0.00 0.00 30.75 3.68
2684 3137 1.679139 CAGGAACACCTCACAAGCAA 58.321 50.000 0.00 0.00 30.75 3.91
2685 3138 0.179020 CCAGGAACACCTCACAAGCA 60.179 55.000 0.00 0.00 30.75 3.91
2686 3139 0.179018 ACCAGGAACACCTCACAAGC 60.179 55.000 0.00 0.00 30.75 4.01
2687 3140 2.222027 GAACCAGGAACACCTCACAAG 58.778 52.381 0.00 0.00 30.75 3.16
2688 3141 1.133915 GGAACCAGGAACACCTCACAA 60.134 52.381 0.00 0.00 30.75 3.33
2689 3142 0.472471 GGAACCAGGAACACCTCACA 59.528 55.000 0.00 0.00 30.75 3.58
2690 3143 0.602905 CGGAACCAGGAACACCTCAC 60.603 60.000 0.00 0.00 30.75 3.51
2691 3144 1.752198 CGGAACCAGGAACACCTCA 59.248 57.895 0.00 0.00 30.75 3.86
2692 3145 1.003718 CCGGAACCAGGAACACCTC 60.004 63.158 0.00 0.00 30.75 3.85
2693 3146 3.157680 CCGGAACCAGGAACACCT 58.842 61.111 0.00 0.00 33.85 4.00
2694 3147 2.671963 GCCGGAACCAGGAACACC 60.672 66.667 5.05 0.00 0.00 4.16
2695 3148 2.671963 GGCCGGAACCAGGAACAC 60.672 66.667 5.05 0.00 0.00 3.32
2696 3149 2.534396 ATGGCCGGAACCAGGAACA 61.534 57.895 5.05 4.77 44.71 3.18
2697 3150 2.046285 CATGGCCGGAACCAGGAAC 61.046 63.158 5.05 0.00 44.28 3.62
2698 3151 2.354729 CATGGCCGGAACCAGGAA 59.645 61.111 5.05 0.00 44.28 3.36
2699 3152 4.424711 GCATGGCCGGAACCAGGA 62.425 66.667 15.81 0.00 44.28 3.86
2700 3153 4.738998 TGCATGGCCGGAACCAGG 62.739 66.667 5.05 7.09 44.71 4.45
2701 3154 2.216750 CTTTGCATGGCCGGAACCAG 62.217 60.000 5.05 0.00 44.71 4.00
2702 3155 2.203552 TTTGCATGGCCGGAACCA 60.204 55.556 5.05 3.83 45.82 3.67
2703 3156 2.212900 GACTTTGCATGGCCGGAACC 62.213 60.000 5.05 0.00 0.00 3.62
2704 3157 1.212751 GACTTTGCATGGCCGGAAC 59.787 57.895 5.05 0.00 0.00 3.62
2705 3158 0.326595 TAGACTTTGCATGGCCGGAA 59.673 50.000 5.05 0.00 0.00 4.30
2706 3159 0.546122 ATAGACTTTGCATGGCCGGA 59.454 50.000 5.05 0.00 0.00 5.14
2707 3160 0.947244 GATAGACTTTGCATGGCCGG 59.053 55.000 0.00 0.00 0.00 6.13
2708 3161 0.947244 GGATAGACTTTGCATGGCCG 59.053 55.000 0.00 0.00 0.00 6.13
2709 3162 2.158696 AGAGGATAGACTTTGCATGGCC 60.159 50.000 0.00 0.00 0.00 5.36
2710 3163 2.877168 CAGAGGATAGACTTTGCATGGC 59.123 50.000 0.00 0.00 0.00 4.40
2711 3164 4.412796 TCAGAGGATAGACTTTGCATGG 57.587 45.455 0.00 0.00 0.00 3.66
2712 3165 5.181009 TGTTCAGAGGATAGACTTTGCATG 58.819 41.667 0.00 0.00 0.00 4.06
2713 3166 5.426689 TGTTCAGAGGATAGACTTTGCAT 57.573 39.130 0.00 0.00 0.00 3.96
2714 3167 4.890158 TGTTCAGAGGATAGACTTTGCA 57.110 40.909 0.00 0.00 0.00 4.08
2715 3168 4.034975 GCATGTTCAGAGGATAGACTTTGC 59.965 45.833 0.00 0.00 0.00 3.68
2724 3177 1.281287 ACAGCTGCATGTTCAGAGGAT 59.719 47.619 15.27 0.00 36.19 3.24
2749 3202 5.485353 AGAATGTCTCTTCACCAATAGGACA 59.515 40.000 0.00 0.00 38.69 4.02
2750 3203 5.983540 AGAATGTCTCTTCACCAATAGGAC 58.016 41.667 0.00 0.00 38.69 3.85
2836 3289 6.848451 TCGAGGGCATTATTAAACAAGAAAC 58.152 36.000 0.00 0.00 0.00 2.78
2837 3290 7.122055 ACATCGAGGGCATTATTAAACAAGAAA 59.878 33.333 0.69 0.00 0.00 2.52
2838 3291 6.601613 ACATCGAGGGCATTATTAAACAAGAA 59.398 34.615 0.69 0.00 0.00 2.52
2839 3292 6.119536 ACATCGAGGGCATTATTAAACAAGA 58.880 36.000 0.69 0.00 0.00 3.02
3134 3590 3.950397 TGAAATTACGAATGCTCCCACT 58.050 40.909 0.00 0.00 0.00 4.00
3147 3603 9.425577 GAGGCCTCTTAGTGTATATGAAATTAC 57.574 37.037 26.25 0.00 0.00 1.89
3150 3606 7.863901 AGAGGCCTCTTAGTGTATATGAAAT 57.136 36.000 30.40 0.90 36.31 2.17
3189 3645 3.316308 GCTCCATGGCTACGATCAAAATT 59.684 43.478 6.96 0.00 0.00 1.82
3199 3655 5.284079 CAATTAACAATGCTCCATGGCTAC 58.716 41.667 6.96 0.00 0.00 3.58
3207 3663 6.930731 TCCTTAAACCAATTAACAATGCTCC 58.069 36.000 0.00 0.00 30.42 4.70
3282 3738 4.500127 TGTAATGTAGGAACCACACATCG 58.500 43.478 10.13 0.00 31.82 3.84
3400 3856 8.205512 TGTACATCTAACACTACAAGTTTTCCA 58.794 33.333 0.00 0.00 0.00 3.53
3407 3863 7.926018 TGCCATATGTACATCTAACACTACAAG 59.074 37.037 12.68 0.00 0.00 3.16
3468 3925 1.747355 AGGTTCATACGTACCGAGGTG 59.253 52.381 4.80 0.00 37.63 4.00
3565 4024 3.456380 AAATGGCAAGTGTCTACCCAT 57.544 42.857 0.00 0.00 37.88 4.00
3676 4136 7.884257 TCACAAAATAGATTTCTGCATCACAA 58.116 30.769 0.00 0.00 0.00 3.33
3681 4141 9.932207 TGAAAATCACAAAATAGATTTCTGCAT 57.068 25.926 0.00 0.00 42.02 3.96
3711 4171 1.547372 GAATGTGACCATTTGCAGCCT 59.453 47.619 0.00 0.00 41.37 4.58
3817 4278 6.507568 TCCCATTTTATACCCAACCAAAGAT 58.492 36.000 0.00 0.00 0.00 2.40
3819 4280 6.460953 CGATCCCATTTTATACCCAACCAAAG 60.461 42.308 0.00 0.00 0.00 2.77
3935 4430 7.093465 ACAAGACGGTGGAGAGAAAGATATAAA 60.093 37.037 0.00 0.00 0.00 1.40
3953 4448 4.336713 TCTCAGATCAGATGTACAAGACGG 59.663 45.833 0.00 0.00 0.00 4.79
3960 4455 9.809096 TGAAATAACTTCTCAGATCAGATGTAC 57.191 33.333 0.00 0.00 34.86 2.90
3969 4464 8.088463 AGGATCAGTGAAATAACTTCTCAGAT 57.912 34.615 0.00 0.00 36.83 2.90
3975 4470 7.787028 ACTCCTAGGATCAGTGAAATAACTTC 58.213 38.462 13.12 0.00 34.31 3.01
3981 4476 8.324191 TCAATAACTCCTAGGATCAGTGAAAT 57.676 34.615 13.12 0.00 0.00 2.17
4012 4507 5.733620 ATCACTGCCATTGTTGAAAAGAT 57.266 34.783 0.00 0.00 0.00 2.40
4019 4514 5.293814 TCAAACAAAATCACTGCCATTGTTG 59.706 36.000 3.29 0.00 41.79 3.33
4021 4516 5.021033 TCAAACAAAATCACTGCCATTGT 57.979 34.783 0.00 0.00 35.86 2.71
4056 4551 2.525368 GGGAAATTTGCCCACAGTACT 58.475 47.619 17.46 0.00 45.31 2.73
4086 4581 8.603242 AACTACAGTACATGGACTTTAACTTG 57.397 34.615 8.22 0.00 0.00 3.16
4094 4589 6.169557 TGTTCAAACTACAGTACATGGACT 57.830 37.500 4.17 4.17 0.00 3.85
4097 4592 4.997395 AGCTGTTCAAACTACAGTACATGG 59.003 41.667 0.00 0.00 43.81 3.66
4123 4618 6.772716 ACTTTCTTTTGAACATCTTAGGAGCA 59.227 34.615 0.00 0.00 38.30 4.26
4134 4629 7.509141 TCATGCTATCACTTTCTTTTGAACA 57.491 32.000 0.00 0.00 38.30 3.18
4197 4692 5.180492 TCACTGGCCGTTTTCTTTATGTTAG 59.820 40.000 0.00 0.00 0.00 2.34
4322 4817 6.240176 GGGAATTAAAGGAGGGATGTATAGCA 60.240 42.308 0.00 0.00 0.00 3.49
4323 4818 6.181190 GGGAATTAAAGGAGGGATGTATAGC 58.819 44.000 0.00 0.00 0.00 2.97
4331 4846 2.841795 AGTCGGGAATTAAAGGAGGGA 58.158 47.619 0.00 0.00 0.00 4.20
4337 4852 8.642908 AAAAAGAAACAAGTCGGGAATTAAAG 57.357 30.769 0.00 0.00 0.00 1.85
4380 4896 6.015434 GGGTTGTTTGACATATCCCAATATCC 60.015 42.308 9.82 0.00 35.48 2.59
4387 4903 4.770010 TGAAAGGGTTGTTTGACATATCCC 59.230 41.667 0.00 0.00 35.56 3.85
4396 4912 8.661352 AAGTATCAAAATGAAAGGGTTGTTTG 57.339 30.769 0.00 0.00 0.00 2.93
4397 4913 7.651704 CGAAGTATCAAAATGAAAGGGTTGTTT 59.348 33.333 0.00 0.00 0.00 2.83
4416 4932 7.526142 TTCTCAAGTATGGATAGCGAAGTAT 57.474 36.000 0.00 0.00 0.00 2.12
4482 4998 4.656112 ACCCTAATTCTGTCGAATCCATCT 59.344 41.667 0.00 0.00 38.89 2.90
4483 4999 4.962155 ACCCTAATTCTGTCGAATCCATC 58.038 43.478 0.00 0.00 38.89 3.51
4484 5000 5.602978 ACTACCCTAATTCTGTCGAATCCAT 59.397 40.000 0.00 0.00 38.89 3.41
4485 5001 4.960469 ACTACCCTAATTCTGTCGAATCCA 59.040 41.667 0.00 0.00 38.89 3.41
4486 5002 5.532664 ACTACCCTAATTCTGTCGAATCC 57.467 43.478 0.00 0.00 38.89 3.01
4487 5003 6.238130 GCAAACTACCCTAATTCTGTCGAATC 60.238 42.308 0.00 0.00 38.89 2.52
4488 5004 5.585047 GCAAACTACCCTAATTCTGTCGAAT 59.415 40.000 0.00 0.00 41.53 3.34
4489 5005 4.933400 GCAAACTACCCTAATTCTGTCGAA 59.067 41.667 0.00 0.00 0.00 3.71
4490 5006 4.222145 AGCAAACTACCCTAATTCTGTCGA 59.778 41.667 0.00 0.00 0.00 4.20
4491 5007 4.504858 AGCAAACTACCCTAATTCTGTCG 58.495 43.478 0.00 0.00 0.00 4.35
4492 5008 6.641474 ACTAGCAAACTACCCTAATTCTGTC 58.359 40.000 0.00 0.00 0.00 3.51
4493 5009 6.622427 ACTAGCAAACTACCCTAATTCTGT 57.378 37.500 0.00 0.00 0.00 3.41
4494 5010 9.614792 AATAACTAGCAAACTACCCTAATTCTG 57.385 33.333 0.00 0.00 0.00 3.02
4509 5025 3.440173 GCCTTGTGAGCAATAACTAGCAA 59.560 43.478 0.00 0.00 33.65 3.91
4515 5031 1.541147 TGCAGCCTTGTGAGCAATAAC 59.459 47.619 0.00 0.00 33.48 1.89
4523 5039 1.134753 CACTTTTGTGCAGCCTTGTGA 59.865 47.619 0.00 0.00 44.07 3.58
4553 5069 5.500234 TCCAAACACCAGATAGAGAAATGG 58.500 41.667 0.00 0.00 38.83 3.16
4565 5081 2.945008 ACGCATATCATCCAAACACCAG 59.055 45.455 0.00 0.00 0.00 4.00
4566 5082 2.942376 GACGCATATCATCCAAACACCA 59.058 45.455 0.00 0.00 0.00 4.17
4567 5083 2.290641 GGACGCATATCATCCAAACACC 59.709 50.000 0.00 0.00 32.35 4.16
4568 5084 2.032894 CGGACGCATATCATCCAAACAC 60.033 50.000 0.00 0.00 32.35 3.32
4569 5085 2.209273 CGGACGCATATCATCCAAACA 58.791 47.619 0.00 0.00 32.35 2.83
4570 5086 1.069906 GCGGACGCATATCATCCAAAC 60.070 52.381 12.31 0.00 41.49 2.93
4571 5087 1.225855 GCGGACGCATATCATCCAAA 58.774 50.000 12.31 0.00 41.49 3.28
4572 5088 0.602638 GGCGGACGCATATCATCCAA 60.603 55.000 18.95 0.00 44.11 3.53
4573 5089 1.005037 GGCGGACGCATATCATCCA 60.005 57.895 18.95 0.00 44.11 3.41
4574 5090 1.741770 GGGCGGACGCATATCATCC 60.742 63.158 18.95 4.65 44.11 3.51
4575 5091 1.741770 GGGGCGGACGCATATCATC 60.742 63.158 18.95 0.00 44.11 2.92
4576 5092 2.347490 GGGGCGGACGCATATCAT 59.653 61.111 18.95 0.00 44.11 2.45
4577 5093 3.936203 GGGGGCGGACGCATATCA 61.936 66.667 18.95 0.00 44.11 2.15
4578 5094 3.626924 AGGGGGCGGACGCATATC 61.627 66.667 18.95 4.93 44.11 1.63
4579 5095 3.941188 CAGGGGGCGGACGCATAT 61.941 66.667 18.95 0.00 44.11 1.78
4782 5300 3.050275 GGTGTCCCGCAGTTCTGC 61.050 66.667 13.97 13.97 0.00 4.26
4826 5344 4.662961 CCGCTGTCACACTCGCCA 62.663 66.667 0.00 0.00 0.00 5.69
4933 5451 1.296392 CTCACCAGATCCGTTGGCA 59.704 57.895 0.00 0.00 39.39 4.92
4964 5483 0.250901 GTTGTCAGGACCACCATGCT 60.251 55.000 0.00 0.00 38.94 3.79
5061 5583 1.078072 TACATGAACCGCCGCCATT 60.078 52.632 0.00 0.00 0.00 3.16
5102 5624 4.166144 AGGTTTTCACCCGGATCTGAATAT 59.834 41.667 0.73 0.00 45.63 1.28
5104 5626 2.308866 AGGTTTTCACCCGGATCTGAAT 59.691 45.455 0.73 0.00 45.63 2.57
5246 5768 4.659874 CCAACGCGTTGCCGTCAC 62.660 66.667 39.42 0.00 41.16 3.67
5255 5777 1.085501 AGAAAACGACACCAACGCGT 61.086 50.000 5.58 5.58 40.35 6.01
5272 5794 1.910580 GAATGACGCCCCCAAGGAGA 61.911 60.000 0.00 0.00 37.72 3.71
5293 5815 1.291272 GTTTCCGTGTACGCCTCCT 59.709 57.895 0.00 0.00 38.18 3.69
5308 5830 3.157680 CCCACTGGTCCCTCGTTT 58.842 61.111 0.00 0.00 0.00 3.60
5340 5862 2.906389 TGTGTAGGATGAAGCACCTCTT 59.094 45.455 0.00 0.00 37.68 2.85
5343 5865 3.264193 TCAATGTGTAGGATGAAGCACCT 59.736 43.478 0.00 0.00 39.95 4.00
5371 5893 2.697761 CCACACCGTCGAGATCCGT 61.698 63.158 0.00 0.00 39.75 4.69
5385 5907 3.226429 GAGTCTCCACTGCGCCACA 62.226 63.158 4.18 0.00 30.63 4.17
5406 5928 3.234730 ATCCTCGGACATCGGGCC 61.235 66.667 0.00 0.00 38.21 5.80
5498 6020 5.635120 TCCATCTTCAGAGCTATACTGCTA 58.365 41.667 0.00 0.00 44.17 3.49
5500 6022 4.862902 TCCATCTTCAGAGCTATACTGC 57.137 45.455 0.00 0.00 35.61 4.40
5506 6028 3.135348 CCACCAATCCATCTTCAGAGCTA 59.865 47.826 0.00 0.00 0.00 3.32
5630 6153 3.945921 GCCAAACCTAACATCTAAGACCC 59.054 47.826 0.00 0.00 0.00 4.46
5677 6200 4.184649 TGTAGGGATGCTGATAGTCTGA 57.815 45.455 0.00 0.00 0.00 3.27
5717 6240 1.204704 CCGTCTAGGCAACATCTGTCA 59.795 52.381 0.00 0.00 41.41 3.58
5851 6381 6.406400 CCAAGTTCATCCAAACACCAGTTTTA 60.406 38.462 0.00 0.00 45.32 1.52
5976 6506 4.647564 ACTGGGTGAAGATCAGAACAAT 57.352 40.909 0.00 0.00 33.19 2.71
6018 6548 9.522804 GTAGTGAGGTGTCATCTTAATTAGAAG 57.477 37.037 0.00 0.00 36.22 2.85
6036 6566 2.814280 ACAAACGGTGAGTAGTGAGG 57.186 50.000 0.00 0.00 0.00 3.86
6043 6573 4.193090 TCACATTGTAACAAACGGTGAGT 58.807 39.130 0.00 0.00 33.80 3.41
6119 6653 6.884280 AAGGACCACTTCAACAAATAGAAG 57.116 37.500 0.00 0.00 45.14 2.85
6134 6668 1.002502 CGGAAAGGGGAAGGACCAC 60.003 63.158 0.00 0.00 43.70 4.16
6135 6669 2.902457 GCGGAAAGGGGAAGGACCA 61.902 63.158 0.00 0.00 41.20 4.02
6136 6670 2.045242 GCGGAAAGGGGAAGGACC 60.045 66.667 0.00 0.00 38.08 4.46
6137 6671 2.436115 CGCGGAAAGGGGAAGGAC 60.436 66.667 0.00 0.00 0.00 3.85
6138 6672 2.926242 ACGCGGAAAGGGGAAGGA 60.926 61.111 12.47 0.00 37.07 3.36
6139 6673 2.746277 CACGCGGAAAGGGGAAGG 60.746 66.667 12.47 0.00 37.07 3.46
6140 6674 1.170290 AAACACGCGGAAAGGGGAAG 61.170 55.000 12.47 0.00 37.07 3.46
6141 6675 0.752376 AAAACACGCGGAAAGGGGAA 60.752 50.000 12.47 0.00 37.07 3.97
6142 6676 0.752376 AAAAACACGCGGAAAGGGGA 60.752 50.000 12.47 0.00 37.07 4.81
6143 6677 0.596341 CAAAAACACGCGGAAAGGGG 60.596 55.000 12.47 0.00 37.07 4.79
6163 6755 3.124806 CGTGCATGCAGAATATCCTCATC 59.875 47.826 23.41 3.12 0.00 2.92
6190 6782 6.073112 CCTGGTTTAATTTCAAAAGGTGCATG 60.073 38.462 0.00 0.00 0.00 4.06
6191 6783 5.997129 CCTGGTTTAATTTCAAAAGGTGCAT 59.003 36.000 0.00 0.00 0.00 3.96
6192 6784 5.104735 ACCTGGTTTAATTTCAAAAGGTGCA 60.105 36.000 0.00 0.00 0.00 4.57
6193 6785 5.236263 CACCTGGTTTAATTTCAAAAGGTGC 59.764 40.000 13.22 0.00 36.99 5.01
6219 6811 9.679661 TGCTCTTAACTGGATTGAAAATACATA 57.320 29.630 0.00 0.00 0.00 2.29
6228 6820 3.840666 AGGAGTGCTCTTAACTGGATTGA 59.159 43.478 0.00 0.00 0.00 2.57
6236 6828 6.407202 TCAGGAAAATAGGAGTGCTCTTAAC 58.593 40.000 0.00 0.00 0.00 2.01
6248 6840 3.519510 TCTGGACCACTCAGGAAAATAGG 59.480 47.826 0.00 0.00 41.22 2.57
6258 6850 0.780637 AGGAGACTCTGGACCACTCA 59.219 55.000 10.95 0.00 32.90 3.41
6271 6863 6.595682 TCCCATAAGAATTCATTCAGGAGAC 58.404 40.000 8.44 0.00 39.23 3.36
6272 6864 6.829985 TCCCATAAGAATTCATTCAGGAGA 57.170 37.500 8.44 0.93 39.23 3.71
6273 6865 6.017605 CGTTCCCATAAGAATTCATTCAGGAG 60.018 42.308 8.44 0.00 39.23 3.69
6274 6866 5.822519 CGTTCCCATAAGAATTCATTCAGGA 59.177 40.000 8.44 5.41 39.23 3.86
6275 6867 5.009010 CCGTTCCCATAAGAATTCATTCAGG 59.991 44.000 8.44 3.01 39.23 3.86
6276 6868 5.009010 CCCGTTCCCATAAGAATTCATTCAG 59.991 44.000 8.44 0.00 39.23 3.02
6277 6869 4.887071 CCCGTTCCCATAAGAATTCATTCA 59.113 41.667 8.44 0.00 39.23 2.57
6278 6870 5.008712 GTCCCGTTCCCATAAGAATTCATTC 59.991 44.000 8.44 0.00 37.06 2.67
6279 6871 4.887655 GTCCCGTTCCCATAAGAATTCATT 59.112 41.667 8.44 2.10 0.00 2.57
6280 6872 4.461198 GTCCCGTTCCCATAAGAATTCAT 58.539 43.478 8.44 0.00 0.00 2.57
6281 6873 3.371166 GGTCCCGTTCCCATAAGAATTCA 60.371 47.826 8.44 0.00 0.00 2.57
6282 6874 3.211865 GGTCCCGTTCCCATAAGAATTC 58.788 50.000 0.00 0.00 0.00 2.17
6283 6875 2.578940 TGGTCCCGTTCCCATAAGAATT 59.421 45.455 0.00 0.00 0.00 2.17
6284 6876 2.201830 TGGTCCCGTTCCCATAAGAAT 58.798 47.619 0.00 0.00 0.00 2.40
6285 6877 1.659022 TGGTCCCGTTCCCATAAGAA 58.341 50.000 0.00 0.00 0.00 2.52
6286 6878 1.766496 GATGGTCCCGTTCCCATAAGA 59.234 52.381 0.00 0.00 41.51 2.10
6287 6879 1.488812 TGATGGTCCCGTTCCCATAAG 59.511 52.381 0.00 0.00 41.51 1.73
6288 6880 1.585895 TGATGGTCCCGTTCCCATAA 58.414 50.000 0.00 0.00 41.51 1.90
6289 6881 1.814429 ATGATGGTCCCGTTCCCATA 58.186 50.000 0.00 0.00 41.51 2.74
6290 6882 0.926293 AATGATGGTCCCGTTCCCAT 59.074 50.000 0.00 0.00 44.11 4.00
6305 6897 3.867493 TGCGCATCACAAAACAAAAATGA 59.133 34.783 5.66 0.00 0.00 2.57
6312 6904 1.020437 TGTCTGCGCATCACAAAACA 58.980 45.000 12.24 4.30 0.00 2.83
6313 6905 2.118228 TTGTCTGCGCATCACAAAAC 57.882 45.000 25.04 10.93 0.00 2.43
6351 6956 1.459455 CCAGCTCATCCTCGGACGAT 61.459 60.000 0.00 0.00 0.00 3.73
6405 7010 0.739112 GCTTCAGCTCCTTGTCCTCG 60.739 60.000 0.00 0.00 38.21 4.63
6486 7091 1.222113 GAGCTTCCCCTTCTTCCGG 59.778 63.158 0.00 0.00 0.00 5.14
6584 7189 4.924305 ATTCAATGGTGGCATGTATGAC 57.076 40.909 0.00 0.00 35.98 3.06
6623 7232 1.723003 GCGACTGAAAATTACCGACGT 59.277 47.619 0.00 0.00 0.00 4.34
6629 7238 5.453587 GCAATCATCAGCGACTGAAAATTAC 59.546 40.000 12.43 7.44 44.04 1.89
6631 7240 4.157289 AGCAATCATCAGCGACTGAAAATT 59.843 37.500 12.43 11.59 44.04 1.82
6632 7241 3.693085 AGCAATCATCAGCGACTGAAAAT 59.307 39.130 12.43 7.31 44.04 1.82
6633 7242 3.076621 AGCAATCATCAGCGACTGAAAA 58.923 40.909 12.43 5.63 44.04 2.29
7019 7644 4.706842 AGGACCATAATATTGAGCGGTT 57.293 40.909 0.00 0.00 0.00 4.44
7075 7700 3.005554 CCTACTTGGCAGACATGTTCAG 58.994 50.000 0.00 0.00 38.33 3.02
7104 7729 8.742777 GCAGGCTGATGGAAAATCAAATATATA 58.257 33.333 20.86 0.00 0.00 0.86
7177 7803 2.011222 TGGTGGTGAAACAACGACTTC 58.989 47.619 0.00 0.00 43.53 3.01
7239 8074 1.571919 GGGCATGTAGAAGCAGTACG 58.428 55.000 0.00 0.00 0.00 3.67
7247 8082 1.686325 GAGGAGCCGGGCATGTAGAA 61.686 60.000 23.09 0.00 0.00 2.10
7258 8100 1.137675 TGTTGATGATGAGAGGAGCCG 59.862 52.381 0.00 0.00 0.00 5.52
7266 8108 7.350467 CCACGAATTTATCTGTTGATGATGAG 58.650 38.462 0.00 0.00 34.32 2.90
7288 8130 2.814336 GAGACAGTTTGTTCATCCCCAC 59.186 50.000 0.00 0.00 0.00 4.61
7292 8134 5.947228 TCAATGAGACAGTTTGTTCATCC 57.053 39.130 7.07 0.00 31.69 3.51
7363 8206 1.392589 CTCTATGTGGCCGGCAAATT 58.607 50.000 30.85 10.65 0.00 1.82
7476 8319 3.577415 GCGGGGGAATGTTAGACTACTAT 59.423 47.826 0.00 0.00 0.00 2.12
7479 8322 1.483415 TGCGGGGGAATGTTAGACTAC 59.517 52.381 0.00 0.00 0.00 2.73
7491 8334 0.768622 CCCATTAATACTGCGGGGGA 59.231 55.000 0.00 0.00 36.14 4.81
7504 8347 2.313317 ACGTTATCGAGCCTCCCATTA 58.687 47.619 0.00 0.00 40.62 1.90
7507 8350 0.174845 CAACGTTATCGAGCCTCCCA 59.825 55.000 0.00 0.00 40.62 4.37
7786 8630 3.505808 GGCTGATACGATCTGGCTC 57.494 57.895 15.39 0.00 45.87 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.