AutoCloner

Multiple sequence alignment - TraesCS5A01G404400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS5A01G404400	chr5A	100.000	5082	0	0	361	5442	596451570	596446489	0.000000e+00	9385.0
1	TraesCS5A01G404400	chr5A	94.000	100	3	3	2375	2471	38014618	38014717	1.220000e-31	148.0
2	TraesCS5A01G404400	chr5A	94.737	95	5	0	2371	2465	362781598	362781692	1.220000e-31	148.0
3	TraesCS5A01G404400	chr5A	89.344	122	8	5	2375	2493	453762832	453762713	1.220000e-31	148.0
4	TraesCS5A01G404400	chr5A	91.589	107	6	3	2378	2483	207681914	207681810	1.580000e-30	145.0
5	TraesCS5A01G404400	chr5A	100.000	62	0	0	1	62	596451930	596451869	1.240000e-21	115.0
6	TraesCS5A01G404400	chr5B	93.157	1476	72	12	883	2340	584824273	584822809	0.000000e+00	2139.0
7	TraesCS5A01G404400	chr5B	94.039	1191	41	4	2461	3621	584822785	584821595	0.000000e+00	1779.0
8	TraesCS5A01G404400	chr5B	91.078	863	46	15	3616	4463	584821535	584820689	0.000000e+00	1138.0
9	TraesCS5A01G404400	chr5B	83.093	485	34	24	4459	4908	584820245	584819774	1.100000e-106	398.0
10	TraesCS5A01G404400	chr5B	84.857	350	35	11	4955	5291	584812050	584811706	2.430000e-88	337.0
11	TraesCS5A01G404400	chr5B	90.741	216	16	3	2133	2345	629956569	629956783	8.920000e-73	285.0
12	TraesCS5A01G404400	chr5B	96.739	92	3	0	2371	2462	665560029	665559938	2.630000e-33	154.0
13	TraesCS5A01G404400	chr5B	90.000	90	4	4	5356	5442	584811612	584811525	1.600000e-20	111.0
14	TraesCS5A01G404400	chr5B	96.552	58	1	1	4894	4951	584812145	584812089	1.610000e-15	95.3
15	TraesCS5A01G404400	chr5B	91.837	49	2	1	827	875	584824379	584824333	3.520000e-07	67.6
16	TraesCS5A01G404400	chr5B	100.000	28	0	0	2353	2380	584822810	584822783	1.000000e-02	52.8
17	TraesCS5A01G404400	chr5D	95.637	1169	42	6	2461	3621	476941789	476940622	0.000000e+00	1868.0
18	TraesCS5A01G404400	chr5D	90.627	1355	79	20	597	1918	476943682	476942343	0.000000e+00	1755.0
19	TraesCS5A01G404400	chr5D	95.439	855	20	12	3616	4463	476940562	476939720	0.000000e+00	1345.0
20	TraesCS5A01G404400	chr5D	96.781	466	14	1	1915	2380	476942251	476941787	0.000000e+00	776.0
21	TraesCS5A01G404400	chr5D	84.934	531	37	18	4457	4951	476939096	476938573	1.050000e-136	497.0
22	TraesCS5A01G404400	chr5D	98.755	241	1	1	361	599	6167535	6167295	1.400000e-115	427.0
23	TraesCS5A01G404400	chr5D	98.755	241	1	1	361	599	503301317	503301557	1.400000e-115	427.0
24	TraesCS5A01G404400	chr5D	98.340	241	2	1	361	599	6266564	6266324	6.520000e-114	422.0
25	TraesCS5A01G404400	chr5D	97.925	241	3	1	361	599	329158567	329158327	3.030000e-112	416.0
26	TraesCS5A01G404400	chr5D	82.019	317	20	19	4955	5246	476938540	476938236	9.110000e-58	235.0
27	TraesCS5A01G404400	chr6D	98.755	241	1	1	361	599	436676945	436676705	1.400000e-115	427.0
28	TraesCS5A01G404400	chr6D	100.000	61	0	0	2	62	436677035	436676975	4.460000e-21	113.0
29	TraesCS5A01G404400	chr6D	92.000	50	1	1	3140	3186	418632108	418632059	3.520000e-07	67.6
30	TraesCS5A01G404400	chr3B	98.755	241	1	1	361	599	101910769	101910529	1.400000e-115	427.0
31	TraesCS5A01G404400	chr3B	95.000	100	5	0	2376	2475	620988898	620988997	2.030000e-34	158.0
32	TraesCS5A01G404400	chr3B	100.000	32	0	0	2135	2166	545817958	545817927	5.890000e-05	60.2
33	TraesCS5A01G404400	chr6A	98.340	241	2	1	361	599	592504541	592504781	6.520000e-114	422.0
34	TraesCS5A01G404400	chr6A	100.000	61	0	0	2	62	308140068	308140128	4.460000e-21	113.0
35	TraesCS5A01G404400	chr6A	93.023	43	2	1	3130	3172	55356045	55356004	1.640000e-05	62.1
36	TraesCS5A01G404400	chr1D	98.340	241	2	1	361	599	254444446	254444686	6.520000e-114	422.0
37	TraesCS5A01G404400	chr1D	100.000	61	0	0	2	62	254444360	254444420	4.460000e-21	113.0
38	TraesCS5A01G404400	chr1D	98.361	61	1	0	2	62	51862748	51862688	2.070000e-19	108.0
39	TraesCS5A01G404400	chr3D	97.925	241	3	1	361	599	200308876	200308636	3.030000e-112	416.0
40	TraesCS5A01G404400	chr3D	86.207	58	3	5	3116	3172	14946995	14946942	2.120000e-04	58.4
41	TraesCS5A01G404400	chr7B	92.632	190	13	1	2141	2330	675146864	675147052	6.950000e-69	272.0
42	TraesCS5A01G404400	chr3A	88.525	183	14	4	2164	2345	352455116	352454940	1.190000e-51	215.0
43	TraesCS5A01G404400	chr2B	89.610	154	11	2	2192	2345	606752366	606752514	2.000000e-44	191.0
44	TraesCS5A01G404400	chr2D	92.593	108	7	1	2359	2465	25037864	25037971	2.630000e-33	154.0
45	TraesCS5A01G404400	chr2D	91.667	48	4	0	3141	3188	556234886	556234933	3.520000e-07	67.6
46	TraesCS5A01G404400	chr4A	94.000	100	5	1	2375	2474	712733797	712733699	3.400000e-32	150.0
47	TraesCS5A01G404400	chr4A	100.000	61	0	0	2	62	309480713	309480653	4.460000e-21	113.0
48	TraesCS5A01G404400	chr4A	100.000	61	0	0	2	62	557132864	557132804	4.460000e-21	113.0
49	TraesCS5A01G404400	chr6B	91.589	107	5	4	2374	2479	507505878	507505775	1.580000e-30	145.0
50	TraesCS5A01G404400	chr7D	100.000	61	0	0	2	62	231616757	231616817	4.460000e-21	113.0
51	TraesCS5A01G404400	chr4D	100.000	61	0	0	2	62	19877781	19877841	4.460000e-21	113.0
52	TraesCS5A01G404400	chr2A	100.000	61	0	0	2	62	53965740	53965680	4.460000e-21	113.0
53	TraesCS5A01G404400	chrUn	90.385	52	2	1	3141	3189	35341741	35341690	1.270000e-06	65.8
54	TraesCS5A01G404400	chr1B	93.023	43	2	1	3130	3172	446635518	446635477	1.640000e-05	62.1
55	TraesCS5A01G404400	chr4B	91.111	45	3	1	3128	3172	59598583	59598626	5.890000e-05	60.2

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS5A01G404400	chr5A	596446489	596451930	5441	True	4750.000000	9385	100.000000	1	5442	2	chr5A.!!$R3	5441
1	TraesCS5A01G404400	chr5B	584819774	584824379	4605	True	929.066667	2139	92.200667	827	4908	6	chr5B.!!$R3	4081
2	TraesCS5A01G404400	chr5D	476938236	476943682	5446	True	1079.333333	1868	90.906167	597	5246	6	chr5D.!!$R4	4649

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	End Stability	Orientation
391	392	0.034059	AGAAAGGATATGGGCTCGCG	59.966	55.0	5.87	F
583	584	0.109723	TTGCTTGTGTAGGTGGGGAC	59.890	55.0	4.46	F
1240	1299	0.377905	GTTCTACTCGTCCTCCTCGC	59.622	60.0	5.03	F
1407	1481	0.824109	TTGGCGATCTGTAGGTCTGG	59.176	55.0	3.86	F
2528	2706	0.108186	TGTGTTAGCTGCCATCCTCG	60.108	55.0	4.63	F
3001	3181	0.773644	ACCCTGTGCCTTCATTGTCT	59.226	50.0	3.41	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
2378	2555	1.344087	ACATTATGGGACGGAGGGAGT	60.344	52.381	0.00	0.00	3.85	R
2446	2623	1.361197	TCATGTACTCCCTCTGTCCCA	59.639	52.381	0.00	0.00	4.37	R
2508	2686	1.661341	GAGGATGGCAGCTAACACAG	58.339	55.000	1.50	0.00	3.66	R
3211	3423	3.610911	GAAAGGATTCACCCTACACAGG	58.389	50.000	0.00	40.05	4.00	R
3661	3938	0.108186	CATAACGTGAGAGCCAGCCA	60.108	55.000	0.00	0.00	4.75	R
4814	5764	0.109597	TACCGACGGACGAAAGAAGC	60.110	55.000	23.38	45.77	3.86	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
22	23	5.581126	TTTTACTACCGCTCGGAATTAGA	57.419	39.130	15.95	0.00	38.96	2.10
23	24	5.779529	TTTACTACCGCTCGGAATTAGAT	57.220	39.130	15.95	0.00	38.96	1.98
24	25	3.919223	ACTACCGCTCGGAATTAGATC	57.081	47.619	15.95	0.00	38.96	2.75
25	26	3.220110	ACTACCGCTCGGAATTAGATCA	58.780	45.455	15.95	0.00	38.96	2.92
26	27	3.827302	ACTACCGCTCGGAATTAGATCAT	59.173	43.478	15.95	0.00	38.96	2.45
27	28	5.008331	ACTACCGCTCGGAATTAGATCATA	58.992	41.667	15.95	0.00	38.96	2.15
28	29	4.866508	ACCGCTCGGAATTAGATCATAA	57.133	40.909	15.95	0.00	38.96	1.90
29	30	4.810790	ACCGCTCGGAATTAGATCATAAG	58.189	43.478	15.95	0.00	38.96	1.73
30	31	4.177026	CCGCTCGGAATTAGATCATAAGG	58.823	47.826	1.35	0.00	37.50	2.69
31	32	4.177026	CGCTCGGAATTAGATCATAAGGG	58.823	47.826	0.00	0.00	0.00	3.95
32	33	4.082190	CGCTCGGAATTAGATCATAAGGGA	60.082	45.833	0.00	0.00	0.00	4.20
33	34	5.566826	CGCTCGGAATTAGATCATAAGGGAA	60.567	44.000	0.00	0.00	0.00	3.97
34	35	6.410540	GCTCGGAATTAGATCATAAGGGAAT	58.589	40.000	0.00	0.00	0.00	3.01
35	36	6.881602	GCTCGGAATTAGATCATAAGGGAATT	59.118	38.462	0.00	0.00	0.00	2.17
36	37	7.391833	GCTCGGAATTAGATCATAAGGGAATTT	59.608	37.037	0.00	0.00	0.00	1.82
37	38	8.848474	TCGGAATTAGATCATAAGGGAATTTC	57.152	34.615	0.00	0.00	0.00	2.17
38	39	8.660435	TCGGAATTAGATCATAAGGGAATTTCT	58.340	33.333	0.00	0.00	0.00	2.52
39	40	9.944376	CGGAATTAGATCATAAGGGAATTTCTA	57.056	33.333	0.00	0.00	0.00	2.10
49	50	8.651389	TCATAAGGGAATTTCTATCTACACTGG	58.349	37.037	0.00	0.00	0.00	4.00
50	51	5.297569	AGGGAATTTCTATCTACACTGGC	57.702	43.478	0.00	0.00	0.00	4.85
51	52	4.721776	AGGGAATTTCTATCTACACTGGCA	59.278	41.667	0.00	0.00	0.00	4.92
52	53	4.816925	GGGAATTTCTATCTACACTGGCAC	59.183	45.833	0.00	0.00	0.00	5.01
53	54	5.396884	GGGAATTTCTATCTACACTGGCACT	60.397	44.000	0.00	0.00	0.00	4.40
54	55	6.183360	GGGAATTTCTATCTACACTGGCACTA	60.183	42.308	0.00	0.00	0.00	2.74
55	56	7.445945	GGAATTTCTATCTACACTGGCACTAT	58.554	38.462	0.00	0.00	0.00	2.12
56	57	8.585881	GGAATTTCTATCTACACTGGCACTATA	58.414	37.037	0.00	0.00	0.00	1.31
57	58	9.982651	GAATTTCTATCTACACTGGCACTATAA	57.017	33.333	0.00	0.00	0.00	0.98
390	391	2.262423	AAGAAAGGATATGGGCTCGC	57.738	50.000	0.00	0.00	0.00	5.03
391	392	0.034059	AGAAAGGATATGGGCTCGCG	59.966	55.000	0.00	0.00	0.00	5.87
392	393	0.249911	GAAAGGATATGGGCTCGCGT	60.250	55.000	5.77	0.00	0.00	6.01
393	394	0.532862	AAAGGATATGGGCTCGCGTG	60.533	55.000	5.77	4.44	0.00	5.34
394	395	1.399744	AAGGATATGGGCTCGCGTGA	61.400	55.000	13.13	0.00	0.00	4.35
395	396	1.373497	GGATATGGGCTCGCGTGAG	60.373	63.158	21.61	21.61	45.49	3.51
396	397	1.364171	GATATGGGCTCGCGTGAGT	59.636	57.895	25.72	9.74	44.48	3.41
397	398	0.596577	GATATGGGCTCGCGTGAGTA	59.403	55.000	25.72	13.78	44.48	2.59
398	399	0.598562	ATATGGGCTCGCGTGAGTAG	59.401	55.000	25.72	3.53	44.48	2.57
399	400	0.464916	TATGGGCTCGCGTGAGTAGA	60.465	55.000	25.72	11.01	44.48	2.59
400	401	1.320344	ATGGGCTCGCGTGAGTAGAA	61.320	55.000	25.72	10.86	44.48	2.10
401	402	1.214589	GGGCTCGCGTGAGTAGAAA	59.785	57.895	25.72	0.00	44.48	2.52
402	403	0.389426	GGGCTCGCGTGAGTAGAAAA	60.389	55.000	25.72	0.00	44.48	2.29
403	404	0.714439	GGCTCGCGTGAGTAGAAAAC	59.286	55.000	25.72	8.25	44.48	2.43
404	405	1.415374	GCTCGCGTGAGTAGAAAACA	58.585	50.000	25.72	0.00	44.48	2.83
405	406	1.790623	GCTCGCGTGAGTAGAAAACAA	59.209	47.619	25.72	0.00	44.48	2.83
406	407	2.220133	GCTCGCGTGAGTAGAAAACAAA	59.780	45.455	25.72	0.00	44.48	2.83
407	408	3.302870	GCTCGCGTGAGTAGAAAACAAAA	60.303	43.478	25.72	0.00	44.48	2.44
408	409	4.446234	CTCGCGTGAGTAGAAAACAAAAG	58.554	43.478	17.90	0.00	37.46	2.27
409	410	4.114073	TCGCGTGAGTAGAAAACAAAAGA	58.886	39.130	5.77	0.00	0.00	2.52
410	411	4.748102	TCGCGTGAGTAGAAAACAAAAGAT	59.252	37.500	5.77	0.00	0.00	2.40
411	412	5.921976	TCGCGTGAGTAGAAAACAAAAGATA	59.078	36.000	5.77	0.00	0.00	1.98
412	413	6.588756	TCGCGTGAGTAGAAAACAAAAGATAT	59.411	34.615	5.77	0.00	0.00	1.63
413	414	6.895040	CGCGTGAGTAGAAAACAAAAGATATC	59.105	38.462	0.00	0.00	0.00	1.63
414	415	7.201444	CGCGTGAGTAGAAAACAAAAGATATCT	60.201	37.037	0.00	0.00	0.00	1.98
415	416	9.084164	GCGTGAGTAGAAAACAAAAGATATCTA	57.916	33.333	5.46	0.00	0.00	1.98
440	441	7.473735	TTCTAGTTCTATCATCAGCTATGGG	57.526	40.000	0.00	0.00	36.15	4.00
441	442	6.556639	TCTAGTTCTATCATCAGCTATGGGT	58.443	40.000	0.00	0.00	36.15	4.51
442	443	7.013220	TCTAGTTCTATCATCAGCTATGGGTT	58.987	38.462	0.00	0.00	36.15	4.11
443	444	6.107901	AGTTCTATCATCAGCTATGGGTTC	57.892	41.667	0.00	0.00	36.15	3.62
444	445	4.790765	TCTATCATCAGCTATGGGTTCG	57.209	45.455	0.00	0.00	36.15	3.95
445	446	4.407365	TCTATCATCAGCTATGGGTTCGA	58.593	43.478	0.00	0.00	36.15	3.71
446	447	4.832823	TCTATCATCAGCTATGGGTTCGAA	59.167	41.667	0.00	0.00	36.15	3.71
447	448	4.630644	ATCATCAGCTATGGGTTCGAAT	57.369	40.909	0.00	0.00	36.15	3.34
448	449	3.995199	TCATCAGCTATGGGTTCGAATC	58.005	45.455	0.00	0.00	36.15	2.52
449	450	3.643320	TCATCAGCTATGGGTTCGAATCT	59.357	43.478	8.59	0.00	36.15	2.40
450	451	4.832823	TCATCAGCTATGGGTTCGAATCTA	59.167	41.667	8.59	1.83	36.15	1.98
451	452	5.304357	TCATCAGCTATGGGTTCGAATCTAA	59.696	40.000	8.59	0.00	36.15	2.10
452	453	5.201713	TCAGCTATGGGTTCGAATCTAAG	57.798	43.478	8.59	4.79	0.00	2.18
453	454	4.893524	TCAGCTATGGGTTCGAATCTAAGA	59.106	41.667	8.59	0.00	0.00	2.10
454	455	5.010112	TCAGCTATGGGTTCGAATCTAAGAG	59.990	44.000	8.59	5.61	0.00	2.85
455	456	5.010112	CAGCTATGGGTTCGAATCTAAGAGA	59.990	44.000	8.59	0.00	0.00	3.10
456	457	5.598830	AGCTATGGGTTCGAATCTAAGAGAA	59.401	40.000	8.59	0.00	0.00	2.87
457	458	6.098409	AGCTATGGGTTCGAATCTAAGAGAAA	59.902	38.462	8.59	0.00	0.00	2.52
458	459	6.931840	GCTATGGGTTCGAATCTAAGAGAAAT	59.068	38.462	8.59	0.00	0.00	2.17
459	460	7.442666	GCTATGGGTTCGAATCTAAGAGAAATT	59.557	37.037	8.59	0.00	0.00	1.82
460	461	7.793927	ATGGGTTCGAATCTAAGAGAAATTC	57.206	36.000	8.59	0.00	0.00	2.17
461	462	6.947464	TGGGTTCGAATCTAAGAGAAATTCT	58.053	36.000	8.59	0.00	37.93	2.40
462	463	8.074613	TGGGTTCGAATCTAAGAGAAATTCTA	57.925	34.615	8.59	0.00	34.14	2.10
463	464	8.198109	TGGGTTCGAATCTAAGAGAAATTCTAG	58.802	37.037	8.59	0.00	34.14	2.43
464	465	8.414778	GGGTTCGAATCTAAGAGAAATTCTAGA	58.585	37.037	8.59	0.00	34.14	2.43
465	466	9.974980	GGTTCGAATCTAAGAGAAATTCTAGAT	57.025	33.333	0.00	0.00	34.14	1.98
488	489	9.981460	AGATAATGTTCTACCCTGAAATTTTCT	57.019	29.630	10.33	0.00	0.00	2.52
491	492	7.839680	ATGTTCTACCCTGAAATTTTCTTGT	57.160	32.000	10.33	7.18	0.00	3.16
492	493	7.272037	TGTTCTACCCTGAAATTTTCTTGTC	57.728	36.000	10.33	0.00	0.00	3.18
493	494	7.060421	TGTTCTACCCTGAAATTTTCTTGTCT	58.940	34.615	10.33	0.00	0.00	3.41
494	495	7.559897	TGTTCTACCCTGAAATTTTCTTGTCTT	59.440	33.333	10.33	0.00	0.00	3.01
495	496	8.414003	GTTCTACCCTGAAATTTTCTTGTCTTT	58.586	33.333	10.33	0.00	0.00	2.52
496	497	8.166422	TCTACCCTGAAATTTTCTTGTCTTTC	57.834	34.615	10.33	0.00	0.00	2.62
497	498	6.161855	ACCCTGAAATTTTCTTGTCTTTCC	57.838	37.500	10.33	0.00	0.00	3.13
498	499	5.070446	ACCCTGAAATTTTCTTGTCTTTCCC	59.930	40.000	10.33	0.00	0.00	3.97
499	500	5.222631	CCTGAAATTTTCTTGTCTTTCCCG	58.777	41.667	10.33	0.00	0.00	5.14
500	501	5.009610	CCTGAAATTTTCTTGTCTTTCCCGA	59.990	40.000	10.33	0.00	0.00	5.14
501	502	6.458232	TGAAATTTTCTTGTCTTTCCCGAA	57.542	33.333	10.33	0.00	0.00	4.30
502	503	7.049799	TGAAATTTTCTTGTCTTTCCCGAAT	57.950	32.000	10.33	0.00	0.00	3.34
503	504	6.922957	TGAAATTTTCTTGTCTTTCCCGAATG	59.077	34.615	10.33	0.00	0.00	2.67
504	505	3.915437	TTTCTTGTCTTTCCCGAATGC	57.085	42.857	0.00	0.00	0.00	3.56
505	506	2.859165	TCTTGTCTTTCCCGAATGCT	57.141	45.000	0.00	0.00	0.00	3.79
506	507	3.973206	TCTTGTCTTTCCCGAATGCTA	57.027	42.857	0.00	0.00	0.00	3.49
507	508	4.280436	TCTTGTCTTTCCCGAATGCTAA	57.720	40.909	0.00	0.00	0.00	3.09
508	509	4.647611	TCTTGTCTTTCCCGAATGCTAAA	58.352	39.130	0.00	0.00	0.00	1.85
509	510	4.695455	TCTTGTCTTTCCCGAATGCTAAAG	59.305	41.667	0.00	0.00	0.00	1.85
510	511	4.280436	TGTCTTTCCCGAATGCTAAAGA	57.720	40.909	0.00	0.00	36.02	2.52
511	512	4.253685	TGTCTTTCCCGAATGCTAAAGAG	58.746	43.478	0.00	0.00	38.32	2.85
512	513	4.020573	TGTCTTTCCCGAATGCTAAAGAGA	60.021	41.667	0.00	0.00	38.32	3.10
513	514	4.935808	GTCTTTCCCGAATGCTAAAGAGAA	59.064	41.667	0.00	0.00	38.32	2.87
514	515	5.064071	GTCTTTCCCGAATGCTAAAGAGAAG	59.936	44.000	0.00	0.00	38.32	2.85
515	516	4.819105	TTCCCGAATGCTAAAGAGAAGA	57.181	40.909	0.00	0.00	0.00	2.87
516	517	4.819105	TCCCGAATGCTAAAGAGAAGAA	57.181	40.909	0.00	0.00	0.00	2.52
517	518	4.759782	TCCCGAATGCTAAAGAGAAGAAG	58.240	43.478	0.00	0.00	0.00	2.85
518	519	4.466370	TCCCGAATGCTAAAGAGAAGAAGA	59.534	41.667	0.00	0.00	0.00	2.87
519	520	4.808364	CCCGAATGCTAAAGAGAAGAAGAG	59.192	45.833	0.00	0.00	0.00	2.85
520	521	4.808364	CCGAATGCTAAAGAGAAGAAGAGG	59.192	45.833	0.00	0.00	0.00	3.69
521	522	5.394663	CCGAATGCTAAAGAGAAGAAGAGGA	60.395	44.000	0.00	0.00	0.00	3.71
522	523	6.279882	CGAATGCTAAAGAGAAGAAGAGGAT	58.720	40.000	0.00	0.00	0.00	3.24
523	524	6.760770	CGAATGCTAAAGAGAAGAAGAGGATT	59.239	38.462	0.00	0.00	0.00	3.01
524	525	7.254387	CGAATGCTAAAGAGAAGAAGAGGATTG	60.254	40.741	0.00	0.00	0.00	2.67
525	526	6.611613	TGCTAAAGAGAAGAAGAGGATTGA	57.388	37.500	0.00	0.00	0.00	2.57
526	527	6.638610	TGCTAAAGAGAAGAAGAGGATTGAG	58.361	40.000	0.00	0.00	0.00	3.02
527	528	6.212388	TGCTAAAGAGAAGAAGAGGATTGAGT	59.788	38.462	0.00	0.00	0.00	3.41
528	529	6.756542	GCTAAAGAGAAGAAGAGGATTGAGTC	59.243	42.308	0.00	0.00	0.00	3.36
529	530	6.678568	AAAGAGAAGAAGAGGATTGAGTCA	57.321	37.500	0.00	0.00	0.00	3.41
530	531	6.678568	AAGAGAAGAAGAGGATTGAGTCAA	57.321	37.500	8.27	8.27	0.00	3.18
531	532	6.678568	AGAGAAGAAGAGGATTGAGTCAAA	57.321	37.500	10.14	0.00	0.00	2.69
532	533	7.072263	AGAGAAGAAGAGGATTGAGTCAAAA	57.928	36.000	10.14	0.00	0.00	2.44
533	534	7.160726	AGAGAAGAAGAGGATTGAGTCAAAAG	58.839	38.462	10.14	0.00	0.00	2.27
534	535	7.016072	AGAGAAGAAGAGGATTGAGTCAAAAGA	59.984	37.037	10.14	0.00	0.00	2.52
535	536	7.512992	AGAAGAAGAGGATTGAGTCAAAAGAA	58.487	34.615	10.14	0.00	0.00	2.52
536	537	7.995488	AGAAGAAGAGGATTGAGTCAAAAGAAA	59.005	33.333	10.14	0.00	0.00	2.52
537	538	8.525290	AAGAAGAGGATTGAGTCAAAAGAAAA	57.475	30.769	10.14	0.00	0.00	2.29
538	539	8.525290	AGAAGAGGATTGAGTCAAAAGAAAAA	57.475	30.769	10.14	0.00	0.00	1.94
539	540	8.628280	AGAAGAGGATTGAGTCAAAAGAAAAAG	58.372	33.333	10.14	0.00	0.00	2.27
540	541	6.743110	AGAGGATTGAGTCAAAAGAAAAAGC	58.257	36.000	10.14	0.00	0.00	3.51
541	542	6.548993	AGAGGATTGAGTCAAAAGAAAAAGCT	59.451	34.615	10.14	0.00	0.00	3.74
542	543	7.721399	AGAGGATTGAGTCAAAAGAAAAAGCTA	59.279	33.333	10.14	0.00	0.00	3.32
543	544	8.414629	AGGATTGAGTCAAAAGAAAAAGCTAT	57.585	30.769	10.14	0.00	0.00	2.97
544	545	8.864087	AGGATTGAGTCAAAAGAAAAAGCTATT	58.136	29.630	10.14	0.00	0.00	1.73
545	546	9.481340	GGATTGAGTCAAAAGAAAAAGCTATTT	57.519	29.630	10.14	0.00	0.00	1.40
548	549	8.647143	TGAGTCAAAAGAAAAAGCTATTTTGG	57.353	30.769	15.20	1.18	41.02	3.28
549	550	8.474025	TGAGTCAAAAGAAAAAGCTATTTTGGA	58.526	29.630	15.20	2.94	41.02	3.53
550	551	8.877808	AGTCAAAAGAAAAAGCTATTTTGGAG	57.122	30.769	15.20	0.00	41.02	3.86
551	552	8.478066	AGTCAAAAGAAAAAGCTATTTTGGAGT	58.522	29.630	15.20	5.05	41.02	3.85
552	553	9.098355	GTCAAAAGAAAAAGCTATTTTGGAGTT	57.902	29.630	15.20	3.96	41.02	3.01
553	554	9.665719	TCAAAAGAAAAAGCTATTTTGGAGTTT	57.334	25.926	15.20	7.30	41.02	2.66
568	569	8.729805	TTTTGGAGTTTTATCAACAATTTGCT	57.270	26.923	0.00	0.00	32.17	3.91
569	570	8.729805	TTTGGAGTTTTATCAACAATTTGCTT	57.270	26.923	0.00	0.00	32.17	3.91
570	571	7.712264	TGGAGTTTTATCAACAATTTGCTTG	57.288	32.000	0.00	1.51	40.90	4.01
580	581	2.627699	ACAATTTGCTTGTGTAGGTGGG	59.372	45.455	0.00	0.00	46.37	4.61
581	582	1.923356	ATTTGCTTGTGTAGGTGGGG	58.077	50.000	0.00	0.00	0.00	4.96
582	583	0.847373	TTTGCTTGTGTAGGTGGGGA	59.153	50.000	0.00	0.00	0.00	4.81
583	584	0.109723	TTGCTTGTGTAGGTGGGGAC	59.890	55.000	0.00	0.00	0.00	4.46
600	601	1.287425	GACCTGGTATTTTCGGAGCG	58.713	55.000	0.00	0.00	0.00	5.03
608	609	5.466819	TGGTATTTTCGGAGCGTATATGAG	58.533	41.667	0.00	0.00	0.00	2.90
625	626	7.542477	CGTATATGAGGTCATTCGAAAAGCTAT	59.458	37.037	13.56	8.17	37.76	2.97
658	659	1.000731	CATGTTCCCGTGGCAATTTGT	59.999	47.619	0.00	0.00	0.00	2.83
692	693	7.000472	ACTCTGTTTTTCTGATGGAGATTTGA	59.000	34.615	0.00	0.00	0.00	2.69
697	698	8.423349	TGTTTTTCTGATGGAGATTTGAAATGT	58.577	29.630	0.00	0.00	0.00	2.71
718	719	4.391830	TGTGAACAAATATGTCGCCTCTTC	59.608	41.667	0.00	0.00	39.40	2.87
737	738	1.204704	TCGTATCTGGTTGGACTGCAG	59.795	52.381	13.48	13.48	0.00	4.41
750	751	3.953612	TGGACTGCAGAACTTCAAATGTT	59.046	39.130	23.35	0.00	0.00	2.71
752	753	5.592282	TGGACTGCAGAACTTCAAATGTTAA	59.408	36.000	23.35	0.00	0.00	2.01
757	758	7.379529	ACTGCAGAACTTCAAATGTTAAAATCG	59.620	33.333	23.35	0.00	0.00	3.34
758	759	7.421599	TGCAGAACTTCAAATGTTAAAATCGA	58.578	30.769	0.00	0.00	0.00	3.59
854	855	4.463879	CTGCTGGAGCGGGACAGG	62.464	72.222	0.00	0.00	45.83	4.00
974	1033	1.378778	CCGAACCCTCTCTCCTCGT	60.379	63.158	0.00	0.00	0.00	4.18
1230	1289	1.726533	GCCTCTCCCCGTTCTACTCG	61.727	65.000	0.00	0.00	0.00	4.18
1240	1299	0.377905	GTTCTACTCGTCCTCCTCGC	59.622	60.000	0.00	0.00	0.00	5.03
1243	1302	3.711059	TACTCGTCCTCCTCGCCCC	62.711	68.421	0.00	0.00	0.00	5.80
1314	1388	1.810030	CCGGAAGTGTAAGCTCGCC	60.810	63.158	0.00	0.00	0.00	5.54
1407	1481	0.824109	TTGGCGATCTGTAGGTCTGG	59.176	55.000	0.00	0.00	0.00	3.86
1421	1495	9.990868	TCTGTAGGTCTGGCTATATTATAATGA	57.009	33.333	8.28	0.00	0.00	2.57
1423	1497	9.769677	TGTAGGTCTGGCTATATTATAATGACT	57.230	33.333	8.28	0.00	0.00	3.41
1463	1537	1.119684	TGGTGATGGAGGTGATACCG	58.880	55.000	0.00	0.00	44.90	4.02
1507	1586	1.649664	CTGCTTAGCTGTGCTGTAGG	58.350	55.000	5.60	0.00	40.10	3.18
1551	1633	9.202273	GAGCGATCTATTTATTTTCTGATCTGT	57.798	33.333	0.00	0.00	0.00	3.41
1575	1657	6.961360	ATGATGCAATCTGATCTGTTGATT	57.039	33.333	14.50	7.91	45.81	2.57
1597	1679	3.393278	TGTAGTTTCCCCTGTTTACTGCT	59.607	43.478	0.00	0.00	0.00	4.24
1603	1685	4.717279	TCCCCTGTTTACTGCTTACTTT	57.283	40.909	0.00	0.00	0.00	2.66
1612	1694	7.581476	TGTTTACTGCTTACTTTCAATGCTAC	58.419	34.615	0.00	0.00	0.00	3.58
1622	1704	5.669477	ACTTTCAATGCTACTCAGAGGATC	58.331	41.667	1.53	0.00	0.00	3.36
1639	1721	3.901844	AGGATCTATTTTAGCGGCTGGTA	59.098	43.478	13.86	0.00	0.00	3.25
1648	1730	2.895372	CGGCTGGTATGGGCGTTC	60.895	66.667	0.00	0.00	45.42	3.95
1666	1748	3.613671	CGTTCAATAATGCAAGTTGCCCA	60.614	43.478	24.59	7.90	44.23	5.36
1670	1752	5.558818	TCAATAATGCAAGTTGCCCAAAAT	58.441	33.333	24.59	8.53	44.23	1.82
1678	1760	4.363999	CAAGTTGCCCAAAATCGTTTGTA	58.636	39.130	0.00	0.00	42.26	2.41
1685	1767	5.167845	GCCCAAAATCGTTTGTATGAATGT	58.832	37.500	0.00	0.00	42.26	2.71
1686	1768	5.637387	GCCCAAAATCGTTTGTATGAATGTT	59.363	36.000	0.00	0.00	42.26	2.71
1687	1769	6.809196	GCCCAAAATCGTTTGTATGAATGTTA	59.191	34.615	0.00	0.00	42.26	2.41
1688	1770	7.009174	GCCCAAAATCGTTTGTATGAATGTTAG	59.991	37.037	0.00	0.00	42.26	2.34
1689	1771	7.487829	CCCAAAATCGTTTGTATGAATGTTAGG	59.512	37.037	0.00	0.00	42.26	2.69
1690	1772	7.487829	CCAAAATCGTTTGTATGAATGTTAGGG	59.512	37.037	0.00	0.00	42.26	3.53
1691	1773	7.931578	AAATCGTTTGTATGAATGTTAGGGA	57.068	32.000	0.00	0.00	0.00	4.20
1692	1774	6.920569	ATCGTTTGTATGAATGTTAGGGAC	57.079	37.500	0.00	0.00	0.00	4.46
1745	1827	5.335191	GCCGATTTATCCTTCAGCCTTAATG	60.335	44.000	0.00	0.00	0.00	1.90
1749	1831	7.522725	CGATTTATCCTTCAGCCTTAATGCAAT	60.523	37.037	5.50	0.00	0.00	3.56
1764	1846	4.963276	ATGCAATTGTACAGCGTGTTAT	57.037	36.364	7.40	0.00	0.00	1.89
1765	1847	6.429791	AATGCAATTGTACAGCGTGTTATA	57.570	33.333	7.40	0.00	33.44	0.98
1783	1865	7.171508	CGTGTTATATGTGGCTTATTCTGATGT	59.828	37.037	0.00	0.00	0.00	3.06
1784	1866	8.285394	GTGTTATATGTGGCTTATTCTGATGTG	58.715	37.037	0.00	0.00	0.00	3.21
1902	1984	9.525409	CCCATCTTTGATATTGATTCTTTTGAC	57.475	33.333	0.00	0.00	0.00	3.18
2020	2197	6.387041	AATCATTATGACATGTGCTTCCTG	57.613	37.500	1.15	0.00	0.00	3.86
2029	2206	3.376234	ACATGTGCTTCCTGATGAATTCG	59.624	43.478	0.00	0.00	31.06	3.34
2093	2270	5.771666	AGATGCTTCAAAATCTGGAACTTCA	59.228	36.000	2.07	0.00	31.89	3.02
2330	2507	5.822519	TGCCTCTATGAAATATGTGTGTTCC	59.177	40.000	0.00	0.00	0.00	3.62
2377	2554	9.928618	ATACCATATGTGCAGATAGTAGATACT	57.071	33.333	9.65	0.00	40.24	2.12
2379	2556	9.179909	ACCATATGTGCAGATAGTAGATACTAC	57.820	37.037	9.65	0.00	41.18	2.73
2380	2557	9.402320	CCATATGTGCAGATAGTAGATACTACT	57.598	37.037	9.65	14.41	41.18	2.57
2382	2559	7.931578	ATGTGCAGATAGTAGATACTACTCC	57.068	40.000	13.57	8.33	41.18	3.85
2383	2560	6.239396	TGTGCAGATAGTAGATACTACTCCC	58.761	44.000	13.57	8.04	41.18	4.30
2384	2561	6.044520	TGTGCAGATAGTAGATACTACTCCCT	59.955	42.308	13.57	9.77	41.18	4.20
2385	2562	6.596497	GTGCAGATAGTAGATACTACTCCCTC	59.404	46.154	13.57	9.93	41.18	4.30
2386	2563	6.117488	GCAGATAGTAGATACTACTCCCTCC	58.883	48.000	13.57	1.66	41.18	4.30
2387	2564	6.342906	CAGATAGTAGATACTACTCCCTCCG	58.657	48.000	13.57	1.66	41.18	4.63
2388	2565	6.024893	AGATAGTAGATACTACTCCCTCCGT	58.975	44.000	13.57	0.00	41.18	4.69
2389	2566	4.622260	AGTAGATACTACTCCCTCCGTC	57.378	50.000	5.73	0.00	34.13	4.79
2390	2567	2.955342	AGATACTACTCCCTCCGTCC	57.045	55.000	0.00	0.00	0.00	4.79
2391	2568	1.424684	AGATACTACTCCCTCCGTCCC	59.575	57.143	0.00	0.00	0.00	4.46
2392	2569	1.144503	GATACTACTCCCTCCGTCCCA	59.855	57.143	0.00	0.00	0.00	4.37
2393	2570	1.229131	TACTACTCCCTCCGTCCCAT	58.771	55.000	0.00	0.00	0.00	4.00
2394	2571	1.229131	ACTACTCCCTCCGTCCCATA	58.771	55.000	0.00	0.00	0.00	2.74
2395	2572	1.572415	ACTACTCCCTCCGTCCCATAA	59.428	52.381	0.00	0.00	0.00	1.90
2396	2573	2.179424	ACTACTCCCTCCGTCCCATAAT	59.821	50.000	0.00	0.00	0.00	1.28
2397	2574	1.424638	ACTCCCTCCGTCCCATAATG	58.575	55.000	0.00	0.00	0.00	1.90
2398	2575	1.344087	ACTCCCTCCGTCCCATAATGT	60.344	52.381	0.00	0.00	0.00	2.71
2399	2576	2.090943	ACTCCCTCCGTCCCATAATGTA	60.091	50.000	0.00	0.00	0.00	2.29
2400	2577	2.969950	CTCCCTCCGTCCCATAATGTAA	59.030	50.000	0.00	0.00	0.00	2.41
2401	2578	2.969950	TCCCTCCGTCCCATAATGTAAG	59.030	50.000	0.00	0.00	0.00	2.34
2402	2579	2.969950	CCCTCCGTCCCATAATGTAAGA	59.030	50.000	0.00	0.00	0.00	2.10
2403	2580	3.244112	CCCTCCGTCCCATAATGTAAGAC	60.244	52.174	0.00	0.00	0.00	3.01
2405	2582	3.025978	TCCGTCCCATAATGTAAGACGT	58.974	45.455	9.63	0.00	46.62	4.34
2406	2583	3.448301	TCCGTCCCATAATGTAAGACGTT	59.552	43.478	9.63	0.00	46.62	3.99
2407	2584	4.081531	TCCGTCCCATAATGTAAGACGTTT	60.082	41.667	9.63	0.00	46.62	3.60
2408	2585	4.632688	CCGTCCCATAATGTAAGACGTTTT	59.367	41.667	9.63	0.00	46.62	2.43
2409	2586	5.122711	CCGTCCCATAATGTAAGACGTTTTT	59.877	40.000	9.63	0.00	46.62	1.94
2435	2612	5.759963	ACACTACACTAGAGTCAAAAGACG	58.240	41.667	0.00	0.00	0.00	4.18
2436	2613	5.298777	ACACTACACTAGAGTCAAAAGACGT	59.701	40.000	0.00	0.00	0.00	4.34
2437	2614	5.852229	CACTACACTAGAGTCAAAAGACGTC	59.148	44.000	7.70	7.70	0.00	4.34
2438	2615	5.764192	ACTACACTAGAGTCAAAAGACGTCT	59.236	40.000	13.58	13.58	0.00	4.18
2439	2616	5.517322	ACACTAGAGTCAAAAGACGTCTT	57.483	39.130	24.93	24.93	37.91	3.01
2440	2617	6.630444	ACACTAGAGTCAAAAGACGTCTTA	57.370	37.500	29.91	13.09	34.61	2.10
2441	2618	6.437094	ACACTAGAGTCAAAAGACGTCTTAC	58.563	40.000	29.91	23.31	34.61	2.34
2442	2619	6.039047	ACACTAGAGTCAAAAGACGTCTTACA	59.961	38.462	29.91	14.47	34.61	2.41
2443	2620	7.085116	CACTAGAGTCAAAAGACGTCTTACAT	58.915	38.462	29.91	18.23	34.61	2.29
2444	2621	7.595502	CACTAGAGTCAAAAGACGTCTTACATT	59.404	37.037	29.91	18.24	34.61	2.71
2445	2622	8.790718	ACTAGAGTCAAAAGACGTCTTACATTA	58.209	33.333	29.91	17.72	34.61	1.90
2446	2623	9.790389	CTAGAGTCAAAAGACGTCTTACATTAT	57.210	33.333	29.91	15.01	34.61	1.28
2447	2624	8.467402	AGAGTCAAAAGACGTCTTACATTATG	57.533	34.615	29.91	19.87	34.61	1.90
2448	2625	7.545965	AGAGTCAAAAGACGTCTTACATTATGG	59.454	37.037	29.91	11.93	34.61	2.74
2449	2626	6.594159	AGTCAAAAGACGTCTTACATTATGGG	59.406	38.462	29.91	9.91	34.61	4.00
2450	2627	6.592607	GTCAAAAGACGTCTTACATTATGGGA	59.407	38.462	29.91	11.86	34.61	4.37
2451	2628	6.592607	TCAAAAGACGTCTTACATTATGGGAC	59.407	38.462	29.91	1.75	34.61	4.46
2452	2629	5.670792	AAGACGTCTTACATTATGGGACA	57.329	39.130	28.80	0.00	37.26	4.02
2453	2630	5.661458	AAGACGTCTTACATTATGGGACAG	58.339	41.667	28.80	9.07	36.47	3.51
2454	2631	5.421056	AAGACGTCTTACATTATGGGACAGA	59.579	40.000	28.80	0.57	36.47	3.41
2455	2632	6.405953	AAGACGTCTTACATTATGGGACAGAG	60.406	42.308	28.80	3.39	36.47	3.35
2456	2633	9.246279	AAGACGTCTTACATTATGGGACAGAGG	62.246	44.444	28.80	8.58	36.47	3.69
2508	2686	6.145371	TCAAAATGCTAAACTGCGGAAAATTC	59.855	34.615	0.00	0.00	35.36	2.17
2528	2706	0.108186	TGTGTTAGCTGCCATCCTCG	60.108	55.000	0.00	0.00	0.00	4.63
2720	2900	5.340891	AGCCTATAGGGATGACAGAAGTA	57.659	43.478	20.58	0.00	37.23	2.24
2789	2969	3.110705	TGAGCTTCTTTCCTGCCTATCT	58.889	45.455	0.00	0.00	0.00	1.98
3001	3181	0.773644	ACCCTGTGCCTTCATTGTCT	59.226	50.000	0.00	0.00	0.00	3.41
3010	3190	4.639310	GTGCCTTCATTGTCTTGATGAGAT	59.361	41.667	0.00	0.00	36.61	2.75
3016	3196	9.784680	CCTTCATTGTCTTGATGAGATAAAAAG	57.215	33.333	0.00	0.00	38.71	2.27
3039	3219	5.934625	AGTGTTAGTAGAAGCCTCAACATTG	59.065	40.000	0.00	0.00	0.00	2.82
3048	3228	2.624838	AGCCTCAACATTGTGTTTCCAG	59.375	45.455	0.00	0.00	38.77	3.86
3100	3308	3.960102	AGAGCTAGGAGGAGATTGTCTTG	59.040	47.826	0.00	0.00	0.00	3.02
3456	3668	1.850441	CGAGGGTAACGCGATTGTTAG	59.150	52.381	15.93	0.00	35.13	2.34
3508	3720	5.670792	AAATACAGTTGGATCAGTACCGA	57.329	39.130	0.00	0.00	0.00	4.69
3542	3754	4.384940	TCCAGATGACAAACGATTCAACA	58.615	39.130	0.00	0.00	0.00	3.33
3544	3756	4.378770	CCAGATGACAAACGATTCAACAGG	60.379	45.833	0.00	0.00	0.00	4.00
3559	3771	5.048846	TCAACAGGAAGAAAGGTTAGCTT	57.951	39.130	0.00	0.00	0.00	3.74
3560	3772	4.821805	TCAACAGGAAGAAAGGTTAGCTTG	59.178	41.667	0.00	0.00	0.00	4.01
3580	3792	2.224744	TGTAATCCTGACTTGCTTGCCA	60.225	45.455	0.00	0.00	0.00	4.92
3582	3794	2.226962	ATCCTGACTTGCTTGCCATT	57.773	45.000	0.00	0.00	0.00	3.16
3583	3795	1.250328	TCCTGACTTGCTTGCCATTG	58.750	50.000	0.00	0.00	0.00	2.82
3586	3798	2.608752	CCTGACTTGCTTGCCATTGTTC	60.609	50.000	0.00	0.00	0.00	3.18
3607	3819	3.616821	TCGCTTTCACCGTTCTTATCATG	59.383	43.478	0.00	0.00	0.00	3.07
3611	3823	3.627395	TCACCGTTCTTATCATGCCTT	57.373	42.857	0.00	0.00	0.00	4.35
3651	3928	9.082313	TCTCTAGATTGCACATCAATATCACTA	57.918	33.333	0.00	0.00	44.95	2.74
3656	3933	7.875041	AGATTGCACATCAATATCACTACTACC	59.125	37.037	10.26	0.00	44.95	3.18
3657	3934	6.731292	TGCACATCAATATCACTACTACCT	57.269	37.500	0.00	0.00	0.00	3.08
3658	3935	6.515832	TGCACATCAATATCACTACTACCTG	58.484	40.000	0.00	0.00	0.00	4.00
3659	3936	5.928839	GCACATCAATATCACTACTACCTGG	59.071	44.000	0.00	0.00	0.00	4.45
3660	3937	5.928839	CACATCAATATCACTACTACCTGGC	59.071	44.000	0.00	0.00	0.00	4.85
3661	3938	5.841237	ACATCAATATCACTACTACCTGGCT	59.159	40.000	0.00	0.00	0.00	4.75
3662	3939	5.791336	TCAATATCACTACTACCTGGCTG	57.209	43.478	0.00	0.00	0.00	4.85
3663	3940	4.588951	TCAATATCACTACTACCTGGCTGG	59.411	45.833	9.11	9.11	42.93	4.85
3683	3960	0.811616	CTGGCTCTCACGTTATGCCC	60.812	60.000	13.69	1.26	42.62	5.36
3685	3962	1.883084	GCTCTCACGTTATGCCCCG	60.883	63.158	0.00	0.00	0.00	5.73
3687	3964	3.261951	CTCACGTTATGCCCCGCG	61.262	66.667	0.00	0.00	0.00	6.46
3994	4282	1.377725	CCGGCTTTCTGCACCTCAT	60.378	57.895	0.00	0.00	45.15	2.90
4120	4415	1.336887	ACATGTTCGTCGTCCTTGAGG	60.337	52.381	0.00	0.00	0.00	3.86
4315	4610	1.222936	CCGGGATCAGCTGAGCTTT	59.777	57.895	29.38	9.75	36.40	3.51
4490	5416	3.217242	CTGGCGTAGAAACAGCAGT	57.783	52.632	0.00	0.00	0.00	4.40
4491	5417	1.512926	CTGGCGTAGAAACAGCAGTT	58.487	50.000	0.00	0.00	40.40	3.16
4492	5418	1.195448	CTGGCGTAGAAACAGCAGTTG	59.805	52.381	0.00	0.00	38.17	3.16
4513	5439	1.789523	TCAGGGTCCATAGCCAGTAC	58.210	55.000	0.00	0.00	46.32	2.73
4598	5528	3.673338	TGCAGAATCGTCGTTTCAAGTAG	59.327	43.478	16.24	4.33	0.00	2.57
4612	5542	9.280174	TCGTTTCAAGTAGAGGTCATTAAAAAT	57.720	29.630	0.00	0.00	0.00	1.82
4613	5543	9.543018	CGTTTCAAGTAGAGGTCATTAAAAATC	57.457	33.333	0.00	0.00	0.00	2.17
4614	5544	9.841880	GTTTCAAGTAGAGGTCATTAAAAATCC	57.158	33.333	0.00	0.00	0.00	3.01
4616	5546	8.792830	TCAAGTAGAGGTCATTAAAAATCCTG	57.207	34.615	0.00	0.00	0.00	3.86
4618	5548	9.014297	CAAGTAGAGGTCATTAAAAATCCTGTT	57.986	33.333	0.00	0.00	0.00	3.16
4621	5553	5.185828	AGAGGTCATTAAAAATCCTGTTGGC	59.814	40.000	0.00	0.00	0.00	4.52
4628	5560	0.813184	AAATCCTGTTGGCTGCATCG	59.187	50.000	0.50	0.00	0.00	3.84
4650	5582	5.628193	TCGTCTTTTCTTGAACTCGTACATC	59.372	40.000	0.00	0.00	0.00	3.06
4660	5592	6.335471	TGAACTCGTACATCTGGAAACTAA	57.665	37.500	0.00	0.00	0.00	2.24
4662	5594	6.643770	TGAACTCGTACATCTGGAAACTAAAC	59.356	38.462	0.00	0.00	0.00	2.01
4663	5595	5.476614	ACTCGTACATCTGGAAACTAAACC	58.523	41.667	0.00	0.00	0.00	3.27
4710	5644	0.612453	TCATAAACGGCCAAACCCCC	60.612	55.000	2.24	0.00	33.26	5.40
4742	5676	1.805120	CGTCGGGAGCAATTATTCGGT	60.805	52.381	0.00	0.00	0.00	4.69
4743	5677	2.544277	CGTCGGGAGCAATTATTCGGTA	60.544	50.000	0.00	0.00	0.00	4.02
4746	5696	2.800544	CGGGAGCAATTATTCGGTACAG	59.199	50.000	0.00	0.00	0.00	2.74
4772	5722	2.260481	CATCCGATCTGATGCATCTCG	58.740	52.381	26.32	24.42	36.07	4.04
4809	5759	3.259425	GAAAGTGCGGCTGCCAGTG	62.259	63.158	20.29	3.35	41.78	3.66
4837	5808	1.930908	CTTTCGTCCGTCGGTAGGCT	61.931	60.000	11.88	0.00	40.32	4.58
4838	5809	1.926511	TTTCGTCCGTCGGTAGGCTC	61.927	60.000	11.88	0.00	40.32	4.70
4839	5810	3.885521	CGTCCGTCGGTAGGCTCC	61.886	72.222	11.88	0.00	35.71	4.70
4844	5815	2.822399	GTCGGTAGGCTCCCCATG	59.178	66.667	0.00	0.00	0.00	3.66
4901	5872	1.068948	TTTAAGCCCCTGTGCCTGTA	58.931	50.000	0.00	0.00	0.00	2.74
4951	5922	2.448582	TTGGTTGGTGAGGCGACCT	61.449	57.895	9.72	0.00	36.88	3.85
4952	5923	2.358737	GGTTGGTGAGGCGACCTG	60.359	66.667	9.72	0.00	36.88	4.00
4953	5924	2.426023	GTTGGTGAGGCGACCTGT	59.574	61.111	9.72	0.00	36.88	4.00
4973	5973	1.956802	CTTGTCTTGTTTCCCCGGC	59.043	57.895	0.00	0.00	0.00	6.13
5017	6017	3.660904	CGAACGTTTACAGGAGCTTTTCG	60.661	47.826	0.46	0.00	0.00	3.46
5019	6019	1.136057	CGTTTACAGGAGCTTTTCGGC	60.136	52.381	0.00	0.00	0.00	5.54
5021	6021	0.672401	TTACAGGAGCTTTTCGGCCG	60.672	55.000	22.12	22.12	0.00	6.13
5022	6022	3.804193	CAGGAGCTTTTCGGCCGC	61.804	66.667	23.51	5.71	0.00	6.53
5064	6065	3.406764	GAGAATGGAAAGAGTGCAGTGT	58.593	45.455	0.00	0.00	0.00	3.55
5069	6070	2.423185	TGGAAAGAGTGCAGTGTTGTTG	59.577	45.455	4.45	0.00	0.00	3.33
5073	6074	1.210478	AGAGTGCAGTGTTGTTGAGGT	59.790	47.619	0.00	0.00	0.00	3.85
5074	6075	2.434336	AGAGTGCAGTGTTGTTGAGGTA	59.566	45.455	0.00	0.00	0.00	3.08
5075	6076	2.802816	GAGTGCAGTGTTGTTGAGGTAG	59.197	50.000	0.00	0.00	0.00	3.18
5078	6079	3.625764	GTGCAGTGTTGTTGAGGTAGAAA	59.374	43.478	0.00	0.00	0.00	2.52
5081	6082	6.017440	GTGCAGTGTTGTTGAGGTAGAAATTA	60.017	38.462	0.00	0.00	0.00	1.40
5082	6083	6.017440	TGCAGTGTTGTTGAGGTAGAAATTAC	60.017	38.462	0.00	0.00	0.00	1.89
5084	6085	7.576236	CAGTGTTGTTGAGGTAGAAATTACAG	58.424	38.462	0.00	0.00	0.00	2.74
5086	6087	8.426489	AGTGTTGTTGAGGTAGAAATTACAGTA	58.574	33.333	0.00	0.00	0.00	2.74
5087	6088	8.709646	GTGTTGTTGAGGTAGAAATTACAGTAG	58.290	37.037	0.00	0.00	0.00	2.57
5088	6089	7.386848	TGTTGTTGAGGTAGAAATTACAGTAGC	59.613	37.037	0.00	0.00	0.00	3.58
5089	6090	6.999950	TGTTGAGGTAGAAATTACAGTAGCA	58.000	36.000	0.00	0.00	0.00	3.49
5090	6091	6.872020	TGTTGAGGTAGAAATTACAGTAGCAC	59.128	38.462	0.00	0.00	0.00	4.40
5091	6092	5.647589	TGAGGTAGAAATTACAGTAGCACG	58.352	41.667	0.00	0.00	0.00	5.34
5092	6093	5.184479	TGAGGTAGAAATTACAGTAGCACGT	59.816	40.000	0.00	0.00	0.00	4.49
5094	6095	5.867716	AGGTAGAAATTACAGTAGCACGTTG	59.132	40.000	0.00	0.00	0.00	4.10
5095	6096	4.663636	AGAAATTACAGTAGCACGTTGC	57.336	40.909	2.28	2.28	45.46	4.17
5104	6105	3.420943	GCACGTTGCTTCCACTGT	58.579	55.556	0.00	0.00	40.96	3.55
5111	6135	1.331756	GTTGCTTCCACTGTGACTGTG	59.668	52.381	14.67	14.67	33.98	3.66
5142	6166	1.122632	TTGCTACGGTTCACCAGGGA	61.123	55.000	0.00	0.00	35.14	4.20
5155	6179	1.745890	CAGGGACGTGAACAGTGGA	59.254	57.895	0.00	0.00	0.00	4.02
5159	6183	0.529119	GGACGTGAACAGTGGACGTT	60.529	55.000	15.56	3.65	45.84	3.99
5167	6191	3.069016	TGAACAGTGGACGTTGTGATAGT	59.931	43.478	0.00	0.00	0.00	2.12
5168	6192	3.299340	ACAGTGGACGTTGTGATAGTC	57.701	47.619	0.00	0.00	0.00	2.59
5169	6193	2.251040	CAGTGGACGTTGTGATAGTCG	58.749	52.381	0.00	0.00	35.87	4.18
5170	6194	1.884579	AGTGGACGTTGTGATAGTCGT	59.115	47.619	0.00	0.00	39.21	4.34
5171	6195	3.076621	AGTGGACGTTGTGATAGTCGTA	58.923	45.455	0.00	0.00	36.67	3.43
5172	6196	3.126514	AGTGGACGTTGTGATAGTCGTAG	59.873	47.826	0.00	0.00	36.67	3.51
5173	6197	3.076621	TGGACGTTGTGATAGTCGTAGT	58.923	45.455	0.00	0.00	36.67	2.73
5180	6204	5.291858	CGTTGTGATAGTCGTAGTACTGGTA	59.708	44.000	5.39	0.00	0.00	3.25
5192	6216	0.033796	TACTGGTAGGGACGGTGAGG	60.034	60.000	0.00	0.00	0.00	3.86
5197	6221	1.982395	TAGGGACGGTGAGGCTGTG	60.982	63.158	0.00	0.00	36.69	3.66
5201	6225	3.521529	GACGGTGAGGCTGTGCTGT	62.522	63.158	0.00	0.00	36.69	4.40
5202	6226	2.154798	GACGGTGAGGCTGTGCTGTA	62.155	60.000	0.00	0.00	36.69	2.74
5203	6227	1.738099	CGGTGAGGCTGTGCTGTAC	60.738	63.158	0.00	0.00	0.00	2.90
5204	6228	1.674057	GGTGAGGCTGTGCTGTACT	59.326	57.895	0.00	0.00	0.00	2.73
5205	6229	0.671781	GGTGAGGCTGTGCTGTACTG	60.672	60.000	0.00	0.00	0.00	2.74
5214	6238	1.012486	GTGCTGTACTGTACCACGGC	61.012	60.000	14.91	10.31	45.42	5.68
5238	6262	0.179076	CACGGCTGCACCTGATGATA	60.179	55.000	0.50	0.00	35.61	2.15
5246	6270	4.537965	CTGCACCTGATGATAGTACGTAC	58.462	47.826	18.10	18.10	0.00	3.67
5247	6271	3.002965	TGCACCTGATGATAGTACGTACG	59.997	47.826	19.49	15.01	0.00	3.67
5248	6272	3.249320	GCACCTGATGATAGTACGTACGA	59.751	47.826	24.41	15.37	0.00	3.43
5249	6273	4.770287	CACCTGATGATAGTACGTACGAC	58.230	47.826	24.41	15.29	0.00	4.34
5260	6284	1.774727	CGTACGACGTTTTTCCCGG	59.225	57.895	10.44	0.00	36.74	5.73
5261	6285	0.662970	CGTACGACGTTTTTCCCGGA	60.663	55.000	10.44	0.00	36.74	5.14
5262	6286	0.784178	GTACGACGTTTTTCCCGGAC	59.216	55.000	5.50	0.00	0.00	4.79
5263	6287	0.387202	TACGACGTTTTTCCCGGACA	59.613	50.000	5.50	0.00	0.00	4.02
5264	6288	0.461693	ACGACGTTTTTCCCGGACAA	60.462	50.000	0.73	0.00	0.00	3.18
5265	6289	0.869730	CGACGTTTTTCCCGGACAAT	59.130	50.000	0.73	0.00	0.00	2.71
5266	6290	2.067766	CGACGTTTTTCCCGGACAATA	58.932	47.619	0.73	0.00	0.00	1.90
5267	6291	2.674357	CGACGTTTTTCCCGGACAATAT	59.326	45.455	0.73	0.00	0.00	1.28
5268	6292	3.125658	CGACGTTTTTCCCGGACAATATT	59.874	43.478	0.73	0.00	0.00	1.28
5269	6293	4.378666	CGACGTTTTTCCCGGACAATATTT	60.379	41.667	0.73	0.00	0.00	1.40
5270	6294	5.050644	ACGTTTTTCCCGGACAATATTTC	57.949	39.130	0.73	0.00	0.00	2.17
5271	6295	4.092816	CGTTTTTCCCGGACAATATTTCG	58.907	43.478	0.73	0.00	0.00	3.46
5272	6296	4.378666	CGTTTTTCCCGGACAATATTTCGT	60.379	41.667	0.73	0.00	0.00	3.85
5273	6297	4.688511	TTTTCCCGGACAATATTTCGTG	57.311	40.909	0.73	0.00	0.00	4.35
5274	6298	2.319136	TCCCGGACAATATTTCGTGG	57.681	50.000	0.73	0.00	0.00	4.94
5275	6299	1.134340	TCCCGGACAATATTTCGTGGG	60.134	52.381	0.73	14.03	36.72	4.61
5276	6300	1.305201	CCGGACAATATTTCGTGGGG	58.695	55.000	0.00	0.00	0.00	4.96
5277	6301	1.407712	CCGGACAATATTTCGTGGGGT	60.408	52.381	0.00	0.00	0.00	4.95
5278	6302	2.361789	CGGACAATATTTCGTGGGGTT	58.638	47.619	0.00	0.00	0.00	4.11
5279	6303	2.750712	CGGACAATATTTCGTGGGGTTT	59.249	45.455	0.00	0.00	0.00	3.27
5280	6304	3.191791	CGGACAATATTTCGTGGGGTTTT	59.808	43.478	0.00	0.00	0.00	2.43
5281	6305	4.673320	CGGACAATATTTCGTGGGGTTTTC	60.673	45.833	0.00	0.00	0.00	2.29
5282	6306	4.461431	GGACAATATTTCGTGGGGTTTTCT	59.539	41.667	0.00	0.00	0.00	2.52
5283	6307	5.047590	GGACAATATTTCGTGGGGTTTTCTT	60.048	40.000	0.00	0.00	0.00	2.52
5284	6308	6.413783	ACAATATTTCGTGGGGTTTTCTTT	57.586	33.333	0.00	0.00	0.00	2.52
5285	6309	6.822442	ACAATATTTCGTGGGGTTTTCTTTT	58.178	32.000	0.00	0.00	0.00	2.27
5286	6310	6.926826	ACAATATTTCGTGGGGTTTTCTTTTC	59.073	34.615	0.00	0.00	0.00	2.29
5287	6311	3.804786	TTTCGTGGGGTTTTCTTTTCC	57.195	42.857	0.00	0.00	0.00	3.13
5288	6312	1.310904	TCGTGGGGTTTTCTTTTCCG	58.689	50.000	0.00	0.00	0.00	4.30
5289	6313	0.312729	CGTGGGGTTTTCTTTTCCGG	59.687	55.000	0.00	0.00	0.00	5.14
5290	6314	0.032952	GTGGGGTTTTCTTTTCCGGC	59.967	55.000	0.00	0.00	0.00	6.13
5291	6315	0.397254	TGGGGTTTTCTTTTCCGGCA	60.397	50.000	0.00	0.00	0.00	5.69
5292	6316	0.753867	GGGGTTTTCTTTTCCGGCAA	59.246	50.000	0.00	0.00	0.00	4.52
5293	6317	1.270094	GGGGTTTTCTTTTCCGGCAAG	60.270	52.381	0.00	1.03	0.00	4.01
5294	6318	1.497991	GGTTTTCTTTTCCGGCAAGC	58.502	50.000	0.00	0.00	0.00	4.01
5295	6319	1.202475	GGTTTTCTTTTCCGGCAAGCA	60.202	47.619	0.00	0.00	0.00	3.91
5296	6320	2.127251	GTTTTCTTTTCCGGCAAGCAG	58.873	47.619	0.00	0.00	0.00	4.24
5297	6321	1.686355	TTTCTTTTCCGGCAAGCAGA	58.314	45.000	0.00	0.00	0.00	4.26
5298	6322	1.909700	TTCTTTTCCGGCAAGCAGAT	58.090	45.000	0.00	0.00	0.00	2.90
5299	6323	1.167851	TCTTTTCCGGCAAGCAGATG	58.832	50.000	0.00	0.00	0.00	2.90
5300	6324	1.167851	CTTTTCCGGCAAGCAGATGA	58.832	50.000	0.00	0.00	0.00	2.92
5301	6325	1.131883	CTTTTCCGGCAAGCAGATGAG	59.868	52.381	0.00	0.00	0.00	2.90
5302	6326	0.324614	TTTCCGGCAAGCAGATGAGA	59.675	50.000	0.00	0.00	0.00	3.27
5303	6327	0.107993	TTCCGGCAAGCAGATGAGAG	60.108	55.000	0.00	0.00	0.00	3.20
5304	6328	1.523258	CCGGCAAGCAGATGAGAGG	60.523	63.158	0.00	0.00	0.00	3.69
5305	6329	1.519246	CGGCAAGCAGATGAGAGGA	59.481	57.895	0.00	0.00	0.00	3.71
5306	6330	0.107993	CGGCAAGCAGATGAGAGGAA	60.108	55.000	0.00	0.00	0.00	3.36
5307	6331	1.676916	CGGCAAGCAGATGAGAGGAAA	60.677	52.381	0.00	0.00	0.00	3.13
5308	6332	2.440409	GGCAAGCAGATGAGAGGAAAA	58.560	47.619	0.00	0.00	0.00	2.29
5309	6333	2.422832	GGCAAGCAGATGAGAGGAAAAG	59.577	50.000	0.00	0.00	0.00	2.27
5310	6334	3.341823	GCAAGCAGATGAGAGGAAAAGA	58.658	45.455	0.00	0.00	0.00	2.52
5311	6335	3.374678	GCAAGCAGATGAGAGGAAAAGAG	59.625	47.826	0.00	0.00	0.00	2.85
5312	6336	3.910568	AGCAGATGAGAGGAAAAGAGG	57.089	47.619	0.00	0.00	0.00	3.69
5313	6337	2.504996	AGCAGATGAGAGGAAAAGAGGG	59.495	50.000	0.00	0.00	0.00	4.30
5314	6338	2.916640	CAGATGAGAGGAAAAGAGGGC	58.083	52.381	0.00	0.00	0.00	5.19
5315	6339	1.484240	AGATGAGAGGAAAAGAGGGCG	59.516	52.381	0.00	0.00	0.00	6.13
5316	6340	0.543749	ATGAGAGGAAAAGAGGGCGG	59.456	55.000	0.00	0.00	0.00	6.13
5317	6341	1.222113	GAGAGGAAAAGAGGGCGGG	59.778	63.158	0.00	0.00	0.00	6.13
5318	6342	2.438614	GAGGAAAAGAGGGCGGGC	60.439	66.667	0.00	0.00	0.00	6.13
5319	6343	4.410400	AGGAAAAGAGGGCGGGCG	62.410	66.667	0.00	0.00	0.00	6.13
5346	6370	4.771356	CTCTTCGCCGCCGTCGAA	62.771	66.667	2.19	2.19	42.74	3.71
5347	6371	4.124351	TCTTCGCCGCCGTCGAAT	62.124	61.111	2.66	0.00	43.73	3.34
5348	6372	3.617538	CTTCGCCGCCGTCGAATC	61.618	66.667	2.66	0.00	43.73	2.52
5352	6376	2.895372	GCCGCCGTCGAATCCAAT	60.895	61.111	0.00	0.00	38.10	3.16
5353	6377	3.014036	CCGCCGTCGAATCCAATG	58.986	61.111	0.00	0.00	38.10	2.82
5354	6378	2.324477	CGCCGTCGAATCCAATGC	59.676	61.111	0.00	0.00	38.10	3.56
5355	6379	2.324477	GCCGTCGAATCCAATGCG	59.676	61.111	0.00	0.00	0.00	4.73
5356	6380	2.461110	GCCGTCGAATCCAATGCGT	61.461	57.895	0.00	0.00	0.00	5.24
5357	6381	1.977594	GCCGTCGAATCCAATGCGTT	61.978	55.000	0.00	0.00	0.00	4.84
5358	6382	0.026285	CCGTCGAATCCAATGCGTTC	59.974	55.000	0.00	0.00	0.00	3.95
5359	6383	0.314259	CGTCGAATCCAATGCGTTCG	60.314	55.000	10.52	10.52	44.31	3.95
5360	6384	0.719465	GTCGAATCCAATGCGTTCGT	59.281	50.000	14.48	0.00	43.62	3.85
5361	6385	0.996462	TCGAATCCAATGCGTTCGTC	59.004	50.000	14.48	0.00	43.62	4.20
5362	6386	0.026285	CGAATCCAATGCGTTCGTCC	59.974	55.000	9.14	0.00	39.70	4.79
5363	6387	1.369625	GAATCCAATGCGTTCGTCCT	58.630	50.000	0.00	0.00	0.00	3.85
5364	6388	1.327764	GAATCCAATGCGTTCGTCCTC	59.672	52.381	0.00	0.00	0.00	3.71
5365	6389	0.462047	ATCCAATGCGTTCGTCCTCC	60.462	55.000	0.00	0.00	0.00	4.30
5366	6390	2.106683	CCAATGCGTTCGTCCTCCC	61.107	63.158	0.00	0.00	0.00	4.30
5367	6391	1.375396	CAATGCGTTCGTCCTCCCA	60.375	57.895	0.00	0.00	0.00	4.37
5368	6392	0.744414	CAATGCGTTCGTCCTCCCAT	60.744	55.000	0.00	0.00	0.00	4.00
5369	6393	0.828022	AATGCGTTCGTCCTCCCATA	59.172	50.000	0.00	0.00	0.00	2.74
5370	6394	0.104304	ATGCGTTCGTCCTCCCATAC	59.896	55.000	0.00	0.00	0.00	2.39
5371	6395	1.227176	GCGTTCGTCCTCCCATACC	60.227	63.158	0.00	0.00	0.00	2.73
5372	6396	1.065273	CGTTCGTCCTCCCATACCG	59.935	63.158	0.00	0.00	0.00	4.02
5373	6397	1.660560	CGTTCGTCCTCCCATACCGT	61.661	60.000	0.00	0.00	0.00	4.83
5374	6398	0.179119	GTTCGTCCTCCCATACCGTG	60.179	60.000	0.00	0.00	0.00	4.94
5375	6399	0.612732	TTCGTCCTCCCATACCGTGT	60.613	55.000	0.00	0.00	0.00	4.49
5376	6400	1.141019	CGTCCTCCCATACCGTGTG	59.859	63.158	0.00	0.00	0.00	3.82
5377	6401	1.601419	CGTCCTCCCATACCGTGTGT	61.601	60.000	0.00	0.00	0.00	3.72
5378	6402	0.108329	GTCCTCCCATACCGTGTGTG	60.108	60.000	0.00	0.00	0.00	3.82
5379	6403	0.543410	TCCTCCCATACCGTGTGTGT	60.543	55.000	0.00	0.00	0.00	3.72
5380	6404	0.391130	CCTCCCATACCGTGTGTGTG	60.391	60.000	0.00	0.00	35.96	3.82
5381	6405	0.320374	CTCCCATACCGTGTGTGTGT	59.680	55.000	0.00	0.00	34.50	3.72
5382	6406	0.319083	TCCCATACCGTGTGTGTGTC	59.681	55.000	0.00	0.00	34.50	3.67
5383	6407	0.672401	CCCATACCGTGTGTGTGTCC	60.672	60.000	0.00	0.00	34.50	4.02
5384	6408	0.672401	CCATACCGTGTGTGTGTCCC	60.672	60.000	0.00	0.00	34.50	4.46
5385	6409	1.011968	CATACCGTGTGTGTGTCCCG	61.012	60.000	0.00	0.00	31.90	5.14
5386	6410	2.775032	ATACCGTGTGTGTGTCCCGC	62.775	60.000	0.00	0.00	0.00	6.13
5388	6412	4.901123	CGTGTGTGTGTCCCGCCA	62.901	66.667	0.00	0.00	0.00	5.69
5389	6413	3.276846	GTGTGTGTGTCCCGCCAC	61.277	66.667	0.00	0.00	35.86	5.01
5390	6414	3.475494	TGTGTGTGTCCCGCCACT	61.475	61.111	0.00	0.00	36.30	4.00
5391	6415	2.203153	GTGTGTGTCCCGCCACTT	60.203	61.111	0.00	0.00	36.30	3.16
5392	6416	1.822186	GTGTGTGTCCCGCCACTTT	60.822	57.895	0.00	0.00	36.30	2.66
5393	6417	1.077357	TGTGTGTCCCGCCACTTTT	60.077	52.632	0.00	0.00	36.30	2.27
5394	6418	0.681564	TGTGTGTCCCGCCACTTTTT	60.682	50.000	0.00	0.00	36.30	1.94
5395	6419	0.030235	GTGTGTCCCGCCACTTTTTC	59.970	55.000	0.00	0.00	36.30	2.29
5396	6420	0.394488	TGTGTCCCGCCACTTTTTCA	60.394	50.000	0.00	0.00	36.30	2.69
5397	6421	0.030235	GTGTCCCGCCACTTTTTCAC	59.970	55.000	0.00	0.00	32.50	3.18
5398	6422	0.394488	TGTCCCGCCACTTTTTCACA	60.394	50.000	0.00	0.00	0.00	3.58
5399	6423	0.958822	GTCCCGCCACTTTTTCACAT	59.041	50.000	0.00	0.00	0.00	3.21
5400	6424	1.068541	GTCCCGCCACTTTTTCACATC	60.069	52.381	0.00	0.00	0.00	3.06
5401	6425	0.109781	CCCGCCACTTTTTCACATCG	60.110	55.000	0.00	0.00	0.00	3.84
5402	6426	0.729140	CCGCCACTTTTTCACATCGC	60.729	55.000	0.00	0.00	0.00	4.58
5403	6427	1.059657	CGCCACTTTTTCACATCGCG	61.060	55.000	0.00	0.00	0.00	5.87
5404	6428	1.337110	GCCACTTTTTCACATCGCGC	61.337	55.000	0.00	0.00	0.00	6.86
5405	6429	0.238289	CCACTTTTTCACATCGCGCT	59.762	50.000	5.56	0.00	0.00	5.92
5406	6430	1.321016	CACTTTTTCACATCGCGCTG	58.679	50.000	8.66	8.66	0.00	5.18
5407	6431	0.944386	ACTTTTTCACATCGCGCTGT	59.056	45.000	10.26	10.26	0.00	4.40
5408	6432	1.321016	CTTTTTCACATCGCGCTGTG	58.679	50.000	31.40	31.40	46.34	3.66
5409	6433	0.660488	TTTTTCACATCGCGCTGTGT	59.340	45.000	34.02	20.85	45.40	3.72
5410	6434	0.234625	TTTTCACATCGCGCTGTGTC	59.765	50.000	34.02	0.00	45.40	3.67
5411	6435	0.878086	TTTCACATCGCGCTGTGTCA	60.878	50.000	34.02	22.78	45.40	3.58
5412	6436	0.878086	TTCACATCGCGCTGTGTCAA	60.878	50.000	34.02	23.02	45.40	3.18
5413	6437	1.154599	CACATCGCGCTGTGTCAAC	60.155	57.895	29.54	0.00	41.29	3.18
5414	6438	2.094539	CATCGCGCTGTGTCAACG	59.905	61.111	5.56	0.00	0.00	4.10
5415	6439	2.355837	ATCGCGCTGTGTCAACGT	60.356	55.556	5.56	0.00	0.00	3.99
5416	6440	1.081041	ATCGCGCTGTGTCAACGTA	60.081	52.632	5.56	0.00	0.00	3.57
5417	6441	1.071019	ATCGCGCTGTGTCAACGTAG	61.071	55.000	5.56	0.00	0.00	3.51
5419	6443	0.726787	CGCGCTGTGTCAACGTAGTA	60.727	55.000	5.56	0.00	45.00	1.82
5420	6444	0.982673	GCGCTGTGTCAACGTAGTAG	59.017	55.000	0.00	0.00	45.00	2.57
5421	6445	1.665161	GCGCTGTGTCAACGTAGTAGT	60.665	52.381	0.00	0.00	45.00	2.73
5422	6446	2.413239	GCGCTGTGTCAACGTAGTAGTA	60.413	50.000	0.00	0.00	45.00	1.82
5423	6447	3.414464	CGCTGTGTCAACGTAGTAGTAG	58.586	50.000	0.00	0.00	45.00	2.57
5424	6448	3.120408	CGCTGTGTCAACGTAGTAGTAGT	60.120	47.826	0.00	0.00	45.00	2.73
5425	6449	4.091945	CGCTGTGTCAACGTAGTAGTAGTA	59.908	45.833	0.00	0.00	45.00	1.82
5426	6450	5.558307	GCTGTGTCAACGTAGTAGTAGTAG	58.442	45.833	0.00	0.00	45.00	2.57
5427	6451	5.121454	GCTGTGTCAACGTAGTAGTAGTAGT	59.879	44.000	0.00	0.00	45.00	2.73
5428	6452	6.311445	GCTGTGTCAACGTAGTAGTAGTAGTA	59.689	42.308	0.00	0.00	45.00	1.82
5429	6453	7.148573	GCTGTGTCAACGTAGTAGTAGTAGTAA	60.149	40.741	0.00	0.00	45.00	2.24
5430	6454	8.018677	TGTGTCAACGTAGTAGTAGTAGTAAC	57.981	38.462	0.00	0.00	45.00	2.50
5431	6455	7.872993	TGTGTCAACGTAGTAGTAGTAGTAACT	59.127	37.037	0.00	0.00	45.00	2.24
5432	6456	8.713271	GTGTCAACGTAGTAGTAGTAGTAACTT	58.287	37.037	0.00	0.00	45.00	2.66
5433	6457	9.273016	TGTCAACGTAGTAGTAGTAGTAACTTT	57.727	33.333	0.00	0.00	45.00	2.66

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	5.581126	TCTAATTCCGAGCGGTAGTAAAA	57.419	39.130	8.96	0.00	36.47	1.52
1	2	5.300034	TGATCTAATTCCGAGCGGTAGTAAA	59.700	40.000	8.96	0.00	36.47	2.01
2	3	4.823442	TGATCTAATTCCGAGCGGTAGTAA	59.177	41.667	8.96	0.00	36.47	2.24
3	4	4.392047	TGATCTAATTCCGAGCGGTAGTA	58.608	43.478	8.96	2.27	36.47	1.82
4	5	3.220110	TGATCTAATTCCGAGCGGTAGT	58.780	45.455	8.96	1.04	36.47	2.73
5	6	3.917329	TGATCTAATTCCGAGCGGTAG	57.083	47.619	8.96	3.98	36.47	3.18
6	7	5.105877	CCTTATGATCTAATTCCGAGCGGTA	60.106	44.000	8.96	0.00	36.47	4.02
7	8	4.322049	CCTTATGATCTAATTCCGAGCGGT	60.322	45.833	8.96	0.00	36.47	5.68
8	9	4.177026	CCTTATGATCTAATTCCGAGCGG	58.823	47.826	1.74	1.74	0.00	5.52
9	10	4.082190	TCCCTTATGATCTAATTCCGAGCG	60.082	45.833	0.00	0.00	0.00	5.03
10	11	5.407407	TCCCTTATGATCTAATTCCGAGC	57.593	43.478	0.00	0.00	0.00	5.03
11	12	8.854614	AAATTCCCTTATGATCTAATTCCGAG	57.145	34.615	0.00	0.00	0.00	4.63
12	13	8.660435	AGAAATTCCCTTATGATCTAATTCCGA	58.340	33.333	0.00	0.00	0.00	4.55
13	14	8.854614	AGAAATTCCCTTATGATCTAATTCCG	57.145	34.615	0.00	0.00	0.00	4.30
23	24	8.651389	CCAGTGTAGATAGAAATTCCCTTATGA	58.349	37.037	0.00	0.00	0.00	2.15
24	25	7.389053	GCCAGTGTAGATAGAAATTCCCTTATG	59.611	40.741	0.00	0.00	0.00	1.90
25	26	7.072454	TGCCAGTGTAGATAGAAATTCCCTTAT	59.928	37.037	0.00	0.00	0.00	1.73
26	27	6.385759	TGCCAGTGTAGATAGAAATTCCCTTA	59.614	38.462	0.00	0.00	0.00	2.69
27	28	5.191722	TGCCAGTGTAGATAGAAATTCCCTT	59.808	40.000	0.00	0.00	0.00	3.95
28	29	4.721776	TGCCAGTGTAGATAGAAATTCCCT	59.278	41.667	0.00	0.00	0.00	4.20
29	30	4.816925	GTGCCAGTGTAGATAGAAATTCCC	59.183	45.833	0.00	0.00	0.00	3.97
30	31	5.675538	AGTGCCAGTGTAGATAGAAATTCC	58.324	41.667	0.00	0.00	0.00	3.01
31	32	9.982651	TTATAGTGCCAGTGTAGATAGAAATTC	57.017	33.333	0.00	0.00	0.00	2.17
368	369	3.381590	GCGAGCCCATATCCTTTCTTTTT	59.618	43.478	0.00	0.00	0.00	1.94
369	370	2.952310	GCGAGCCCATATCCTTTCTTTT	59.048	45.455	0.00	0.00	0.00	2.27
370	371	2.576615	GCGAGCCCATATCCTTTCTTT	58.423	47.619	0.00	0.00	0.00	2.52
371	372	1.541233	CGCGAGCCCATATCCTTTCTT	60.541	52.381	0.00	0.00	0.00	2.52
372	373	0.034059	CGCGAGCCCATATCCTTTCT	59.966	55.000	0.00	0.00	0.00	2.52
373	374	0.249911	ACGCGAGCCCATATCCTTTC	60.250	55.000	15.93	0.00	0.00	2.62
374	375	0.532862	CACGCGAGCCCATATCCTTT	60.533	55.000	15.93	0.00	0.00	3.11
375	376	1.069765	CACGCGAGCCCATATCCTT	59.930	57.895	15.93	0.00	0.00	3.36
376	377	1.810606	CTCACGCGAGCCCATATCCT	61.811	60.000	15.93	0.00	31.00	3.24
377	378	1.373497	CTCACGCGAGCCCATATCC	60.373	63.158	15.93	0.00	31.00	2.59
378	379	0.596577	TACTCACGCGAGCCCATATC	59.403	55.000	15.93	0.00	43.66	1.63
379	380	0.598562	CTACTCACGCGAGCCCATAT	59.401	55.000	15.93	0.00	43.66	1.78
380	381	0.464916	TCTACTCACGCGAGCCCATA	60.465	55.000	15.93	0.00	43.66	2.74
381	382	1.320344	TTCTACTCACGCGAGCCCAT	61.320	55.000	15.93	0.00	43.66	4.00
382	383	1.529152	TTTCTACTCACGCGAGCCCA	61.529	55.000	15.93	0.00	43.66	5.36
383	384	0.389426	TTTTCTACTCACGCGAGCCC	60.389	55.000	15.93	0.00	43.66	5.19
384	385	0.714439	GTTTTCTACTCACGCGAGCC	59.286	55.000	15.93	0.00	43.66	4.70
385	386	1.415374	TGTTTTCTACTCACGCGAGC	58.585	50.000	15.93	0.00	43.66	5.03
386	387	4.208460	TCTTTTGTTTTCTACTCACGCGAG	59.792	41.667	15.93	4.59	45.49	5.03
387	388	4.114073	TCTTTTGTTTTCTACTCACGCGA	58.886	39.130	15.93	0.00	0.00	5.87
388	389	4.446857	TCTTTTGTTTTCTACTCACGCG	57.553	40.909	3.53	3.53	0.00	6.01
389	390	7.965045	AGATATCTTTTGTTTTCTACTCACGC	58.035	34.615	0.00	0.00	0.00	5.34
414	415	9.194972	CCCATAGCTGATGATAGAACTAGAATA	57.805	37.037	0.00	0.00	37.82	1.75
415	416	7.677745	ACCCATAGCTGATGATAGAACTAGAAT	59.322	37.037	0.00	0.00	37.82	2.40
416	417	7.013220	ACCCATAGCTGATGATAGAACTAGAA	58.987	38.462	0.00	0.00	37.82	2.10
417	418	6.556639	ACCCATAGCTGATGATAGAACTAGA	58.443	40.000	0.00	0.00	37.82	2.43
418	419	6.849085	ACCCATAGCTGATGATAGAACTAG	57.151	41.667	0.00	0.00	37.82	2.57
419	420	6.071896	CGAACCCATAGCTGATGATAGAACTA	60.072	42.308	0.00	0.00	37.82	2.24
420	421	5.279206	CGAACCCATAGCTGATGATAGAACT	60.279	44.000	0.00	0.00	37.82	3.01
421	422	4.926238	CGAACCCATAGCTGATGATAGAAC	59.074	45.833	0.00	0.00	37.82	3.01
422	423	4.832823	TCGAACCCATAGCTGATGATAGAA	59.167	41.667	0.00	0.00	37.82	2.10
423	424	4.407365	TCGAACCCATAGCTGATGATAGA	58.593	43.478	0.00	0.00	37.82	1.98
424	425	4.790765	TCGAACCCATAGCTGATGATAG	57.209	45.455	0.00	0.00	37.82	2.08
425	426	5.481824	AGATTCGAACCCATAGCTGATGATA	59.518	40.000	0.00	0.00	37.82	2.15
426	427	4.285517	AGATTCGAACCCATAGCTGATGAT	59.714	41.667	0.00	0.00	37.82	2.45
427	428	3.643320	AGATTCGAACCCATAGCTGATGA	59.357	43.478	0.00	0.00	37.82	2.92
428	429	4.000331	AGATTCGAACCCATAGCTGATG	58.000	45.455	0.00	0.00	35.05	3.07
429	430	5.540337	TCTTAGATTCGAACCCATAGCTGAT	59.460	40.000	0.00	0.00	0.00	2.90
430	431	4.893524	TCTTAGATTCGAACCCATAGCTGA	59.106	41.667	0.00	0.00	0.00	4.26
431	432	5.010112	TCTCTTAGATTCGAACCCATAGCTG	59.990	44.000	0.00	0.00	0.00	4.24
432	433	5.141182	TCTCTTAGATTCGAACCCATAGCT	58.859	41.667	0.00	0.00	0.00	3.32
433	434	5.455056	TCTCTTAGATTCGAACCCATAGC	57.545	43.478	0.00	0.00	0.00	2.97
434	435	8.894768	AATTTCTCTTAGATTCGAACCCATAG	57.105	34.615	0.00	0.00	0.00	2.23
435	436	8.705594	AGAATTTCTCTTAGATTCGAACCCATA	58.294	33.333	0.00	0.00	35.49	2.74
436	437	7.569240	AGAATTTCTCTTAGATTCGAACCCAT	58.431	34.615	0.00	0.00	35.49	4.00
437	438	6.947464	AGAATTTCTCTTAGATTCGAACCCA	58.053	36.000	0.00	0.00	35.49	4.51
438	439	8.414778	TCTAGAATTTCTCTTAGATTCGAACCC	58.585	37.037	0.00	0.00	35.49	4.11
439	440	9.974980	ATCTAGAATTTCTCTTAGATTCGAACC	57.025	33.333	0.00	0.00	35.49	3.62
462	463	9.981460	AGAAAATTTCAGGGTAGAACATTATCT	57.019	29.630	8.55	0.00	0.00	1.98
465	466	9.362151	ACAAGAAAATTTCAGGGTAGAACATTA	57.638	29.630	8.55	0.00	0.00	1.90
466	467	8.250143	ACAAGAAAATTTCAGGGTAGAACATT	57.750	30.769	8.55	0.00	0.00	2.71
467	468	7.725844	AGACAAGAAAATTTCAGGGTAGAACAT	59.274	33.333	8.55	0.00	0.00	2.71
468	469	7.060421	AGACAAGAAAATTTCAGGGTAGAACA	58.940	34.615	8.55	0.00	0.00	3.18
469	470	7.511959	AGACAAGAAAATTTCAGGGTAGAAC	57.488	36.000	8.55	0.00	0.00	3.01
470	471	8.533569	AAAGACAAGAAAATTTCAGGGTAGAA	57.466	30.769	8.55	0.00	0.00	2.10
471	472	7.230712	GGAAAGACAAGAAAATTTCAGGGTAGA	59.769	37.037	8.55	0.00	34.15	2.59
472	473	7.371159	GGAAAGACAAGAAAATTTCAGGGTAG	58.629	38.462	8.55	0.00	34.15	3.18
473	474	6.266786	GGGAAAGACAAGAAAATTTCAGGGTA	59.733	38.462	8.55	0.00	34.15	3.69
474	475	5.070446	GGGAAAGACAAGAAAATTTCAGGGT	59.930	40.000	8.55	2.88	34.15	4.34
475	476	5.541845	GGGAAAGACAAGAAAATTTCAGGG	58.458	41.667	8.55	0.00	34.15	4.45
476	477	5.009610	TCGGGAAAGACAAGAAAATTTCAGG	59.990	40.000	8.55	2.11	34.15	3.86
477	478	6.072112	TCGGGAAAGACAAGAAAATTTCAG	57.928	37.500	8.55	2.85	34.15	3.02
478	479	6.458232	TTCGGGAAAGACAAGAAAATTTCA	57.542	33.333	8.55	0.00	34.15	2.69
479	480	6.128822	GCATTCGGGAAAGACAAGAAAATTTC	60.129	38.462	0.00	0.00	0.00	2.17
480	481	5.696270	GCATTCGGGAAAGACAAGAAAATTT	59.304	36.000	0.00	0.00	0.00	1.82
481	482	5.011023	AGCATTCGGGAAAGACAAGAAAATT	59.989	36.000	0.00	0.00	0.00	1.82
482	483	4.524328	AGCATTCGGGAAAGACAAGAAAAT	59.476	37.500	0.00	0.00	0.00	1.82
483	484	3.888930	AGCATTCGGGAAAGACAAGAAAA	59.111	39.130	0.00	0.00	0.00	2.29
484	485	3.486383	AGCATTCGGGAAAGACAAGAAA	58.514	40.909	0.00	0.00	0.00	2.52
485	486	3.140325	AGCATTCGGGAAAGACAAGAA	57.860	42.857	0.00	0.00	0.00	2.52
486	487	2.859165	AGCATTCGGGAAAGACAAGA	57.141	45.000	0.00	0.00	0.00	3.02
487	488	4.695455	TCTTTAGCATTCGGGAAAGACAAG	59.305	41.667	0.00	0.00	33.97	3.16
488	489	4.647611	TCTTTAGCATTCGGGAAAGACAA	58.352	39.130	0.00	0.00	33.97	3.18
489	490	4.020573	TCTCTTTAGCATTCGGGAAAGACA	60.021	41.667	0.00	0.00	34.89	3.41
490	491	4.504858	TCTCTTTAGCATTCGGGAAAGAC	58.495	43.478	0.00	0.00	34.89	3.01
491	492	4.819105	TCTCTTTAGCATTCGGGAAAGA	57.181	40.909	0.00	0.00	36.67	2.52
492	493	5.178797	TCTTCTCTTTAGCATTCGGGAAAG	58.821	41.667	0.00	0.00	0.00	2.62
493	494	5.160607	TCTTCTCTTTAGCATTCGGGAAA	57.839	39.130	0.00	0.00	0.00	3.13
494	495	4.819105	TCTTCTCTTTAGCATTCGGGAA	57.181	40.909	0.00	0.00	0.00	3.97
495	496	4.466370	TCTTCTTCTCTTTAGCATTCGGGA	59.534	41.667	0.00	0.00	0.00	5.14
496	497	4.759782	TCTTCTTCTCTTTAGCATTCGGG	58.240	43.478	0.00	0.00	0.00	5.14
497	498	4.808364	CCTCTTCTTCTCTTTAGCATTCGG	59.192	45.833	0.00	0.00	0.00	4.30
498	499	5.655488	TCCTCTTCTTCTCTTTAGCATTCG	58.345	41.667	0.00	0.00	0.00	3.34
499	500	7.768120	TCAATCCTCTTCTTCTCTTTAGCATTC	59.232	37.037	0.00	0.00	0.00	2.67
500	501	7.628234	TCAATCCTCTTCTTCTCTTTAGCATT	58.372	34.615	0.00	0.00	0.00	3.56
501	502	7.092935	ACTCAATCCTCTTCTTCTCTTTAGCAT	60.093	37.037	0.00	0.00	0.00	3.79
502	503	6.212388	ACTCAATCCTCTTCTTCTCTTTAGCA	59.788	38.462	0.00	0.00	0.00	3.49
503	504	6.639563	ACTCAATCCTCTTCTTCTCTTTAGC	58.360	40.000	0.00	0.00	0.00	3.09
504	505	7.835822	TGACTCAATCCTCTTCTTCTCTTTAG	58.164	38.462	0.00	0.00	0.00	1.85
505	506	7.782897	TGACTCAATCCTCTTCTTCTCTTTA	57.217	36.000	0.00	0.00	0.00	1.85
506	507	6.678568	TGACTCAATCCTCTTCTTCTCTTT	57.321	37.500	0.00	0.00	0.00	2.52
507	508	6.678568	TTGACTCAATCCTCTTCTTCTCTT	57.321	37.500	0.00	0.00	0.00	2.85
508	509	6.678568	TTTGACTCAATCCTCTTCTTCTCT	57.321	37.500	0.00	0.00	0.00	3.10
509	510	7.158021	TCTTTTGACTCAATCCTCTTCTTCTC	58.842	38.462	0.00	0.00	0.00	2.87
510	511	7.072263	TCTTTTGACTCAATCCTCTTCTTCT	57.928	36.000	0.00	0.00	0.00	2.85
511	512	7.736447	TTCTTTTGACTCAATCCTCTTCTTC	57.264	36.000	0.00	0.00	0.00	2.87
512	513	8.525290	TTTTCTTTTGACTCAATCCTCTTCTT	57.475	30.769	0.00	0.00	0.00	2.52
513	514	8.525290	TTTTTCTTTTGACTCAATCCTCTTCT	57.475	30.769	0.00	0.00	0.00	2.85
514	515	7.380870	GCTTTTTCTTTTGACTCAATCCTCTTC	59.619	37.037	0.00	0.00	0.00	2.87
515	516	7.069208	AGCTTTTTCTTTTGACTCAATCCTCTT	59.931	33.333	0.00	0.00	0.00	2.85
516	517	6.548993	AGCTTTTTCTTTTGACTCAATCCTCT	59.451	34.615	0.00	0.00	0.00	3.69
517	518	6.743110	AGCTTTTTCTTTTGACTCAATCCTC	58.257	36.000	0.00	0.00	0.00	3.71
518	519	6.721704	AGCTTTTTCTTTTGACTCAATCCT	57.278	33.333	0.00	0.00	0.00	3.24
519	520	9.481340	AAATAGCTTTTTCTTTTGACTCAATCC	57.519	29.630	0.00	0.00	0.00	3.01
522	523	9.097257	CCAAAATAGCTTTTTCTTTTGACTCAA	57.903	29.630	2.47	0.00	39.69	3.02
523	524	8.474025	TCCAAAATAGCTTTTTCTTTTGACTCA	58.526	29.630	2.47	0.00	39.69	3.41
524	525	8.871686	TCCAAAATAGCTTTTTCTTTTGACTC	57.128	30.769	2.47	0.00	39.69	3.36
525	526	8.478066	ACTCCAAAATAGCTTTTTCTTTTGACT	58.522	29.630	2.47	0.00	39.69	3.41
526	527	8.648557	ACTCCAAAATAGCTTTTTCTTTTGAC	57.351	30.769	2.47	0.00	39.69	3.18
527	528	9.665719	AAACTCCAAAATAGCTTTTTCTTTTGA	57.334	25.926	2.47	0.00	39.69	2.69
542	543	9.341078	AGCAAATTGTTGATAAAACTCCAAAAT	57.659	25.926	0.00	0.00	36.83	1.82
543	544	8.729805	AGCAAATTGTTGATAAAACTCCAAAA	57.270	26.923	0.00	0.00	36.83	2.44
544	545	8.610896	CAAGCAAATTGTTGATAAAACTCCAAA	58.389	29.630	0.00	0.00	36.83	3.28
545	546	8.140677	CAAGCAAATTGTTGATAAAACTCCAA	57.859	30.769	0.00	0.00	36.83	3.53
546	547	7.712264	CAAGCAAATTGTTGATAAAACTCCA	57.288	32.000	0.00	0.00	36.83	3.86
560	561	2.029110	CCCCACCTACACAAGCAAATTG	60.029	50.000	0.00	0.00	45.01	2.32
561	562	2.158385	TCCCCACCTACACAAGCAAATT	60.158	45.455	0.00	0.00	0.00	1.82
562	563	1.427368	TCCCCACCTACACAAGCAAAT	59.573	47.619	0.00	0.00	0.00	2.32
563	564	0.847373	TCCCCACCTACACAAGCAAA	59.153	50.000	0.00	0.00	0.00	3.68
564	565	0.109723	GTCCCCACCTACACAAGCAA	59.890	55.000	0.00	0.00	0.00	3.91
565	566	1.758592	GTCCCCACCTACACAAGCA	59.241	57.895	0.00	0.00	0.00	3.91
566	567	1.002502	GGTCCCCACCTACACAAGC	60.003	63.158	0.00	0.00	40.00	4.01
575	576	1.680860	CGAAAATACCAGGTCCCCACC	60.681	57.143	0.00	0.00	44.19	4.61
576	577	1.680860	CCGAAAATACCAGGTCCCCAC	60.681	57.143	0.00	0.00	0.00	4.61
577	578	0.621609	CCGAAAATACCAGGTCCCCA	59.378	55.000	0.00	0.00	0.00	4.96
578	579	0.913924	TCCGAAAATACCAGGTCCCC	59.086	55.000	0.00	0.00	0.00	4.81
579	580	1.746171	GCTCCGAAAATACCAGGTCCC	60.746	57.143	0.00	0.00	0.00	4.46
580	581	1.664873	GCTCCGAAAATACCAGGTCC	58.335	55.000	0.00	0.00	0.00	4.46
581	582	1.287425	CGCTCCGAAAATACCAGGTC	58.713	55.000	0.00	0.00	0.00	3.85
582	583	0.611714	ACGCTCCGAAAATACCAGGT	59.388	50.000	0.00	0.00	0.00	4.00
583	584	2.589798	TACGCTCCGAAAATACCAGG	57.410	50.000	0.00	0.00	0.00	4.45
584	585	5.466819	TCATATACGCTCCGAAAATACCAG	58.533	41.667	0.00	0.00	0.00	4.00
585	586	5.456548	TCATATACGCTCCGAAAATACCA	57.543	39.130	0.00	0.00	0.00	3.25
586	587	4.863131	CCTCATATACGCTCCGAAAATACC	59.137	45.833	0.00	0.00	0.00	2.73
587	588	5.467705	ACCTCATATACGCTCCGAAAATAC	58.532	41.667	0.00	0.00	0.00	1.89
588	589	5.242171	TGACCTCATATACGCTCCGAAAATA	59.758	40.000	0.00	0.00	0.00	1.40
589	590	4.038763	TGACCTCATATACGCTCCGAAAAT	59.961	41.667	0.00	0.00	0.00	1.82
590	591	3.382227	TGACCTCATATACGCTCCGAAAA	59.618	43.478	0.00	0.00	0.00	2.29
591	592	2.953648	TGACCTCATATACGCTCCGAAA	59.046	45.455	0.00	0.00	0.00	3.46
592	593	2.578786	TGACCTCATATACGCTCCGAA	58.421	47.619	0.00	0.00	0.00	4.30
593	594	2.265589	TGACCTCATATACGCTCCGA	57.734	50.000	0.00	0.00	0.00	4.55
594	595	3.502920	GAATGACCTCATATACGCTCCG	58.497	50.000	0.00	0.00	35.10	4.63
595	596	3.190744	TCGAATGACCTCATATACGCTCC	59.809	47.826	0.00	0.00	35.10	4.70
600	601	8.764524	ATAGCTTTTCGAATGACCTCATATAC	57.235	34.615	0.00	0.00	35.10	1.47
608	609	5.545658	TGTTGATAGCTTTTCGAATGACC	57.454	39.130	0.00	0.00	0.00	4.02
625	626	5.352846	CACGGGAACATGTACATTATGTTGA	59.647	40.000	16.07	0.00	45.82	3.18
692	693	5.415701	AGAGGCGACATATTTGTTCACATTT	59.584	36.000	0.00	0.00	35.79	2.32
697	698	3.616821	CGAAGAGGCGACATATTTGTTCA	59.383	43.478	0.00	0.00	35.79	3.18
718	719	1.204704	TCTGCAGTCCAACCAGATACG	59.795	52.381	14.67	0.00	31.16	3.06
802	803	9.003658	CACCAGTCAACATCTATTTCTACTTTT	57.996	33.333	0.00	0.00	0.00	2.27
803	804	8.157476	ACACCAGTCAACATCTATTTCTACTTT	58.843	33.333	0.00	0.00	0.00	2.66
804	805	7.604164	CACACCAGTCAACATCTATTTCTACTT	59.396	37.037	0.00	0.00	0.00	2.24
806	807	6.313905	CCACACCAGTCAACATCTATTTCTAC	59.686	42.308	0.00	0.00	0.00	2.59
807	808	6.406370	CCACACCAGTCAACATCTATTTCTA	58.594	40.000	0.00	0.00	0.00	2.10
808	809	5.248640	CCACACCAGTCAACATCTATTTCT	58.751	41.667	0.00	0.00	0.00	2.52
809	810	4.142600	GCCACACCAGTCAACATCTATTTC	60.143	45.833	0.00	0.00	0.00	2.17
820	821	1.608055	CAGAATTGCCACACCAGTCA	58.392	50.000	0.00	0.00	0.00	3.41
821	822	0.242017	GCAGAATTGCCACACCAGTC	59.758	55.000	0.00	0.00	44.74	3.51
854	855	2.930455	GCTCTGTTTCTCTCTGCAGTCC	60.930	54.545	14.67	0.00	0.00	3.85
855	856	2.288702	TGCTCTGTTTCTCTCTGCAGTC	60.289	50.000	14.67	0.00	0.00	3.51
904	960	1.595382	CGGAATCGTGATGGGCCTC	60.595	63.158	4.53	0.00	0.00	4.70
1191	1250	2.228343	GCGGTAGTACTCATAGGCGAAT	59.772	50.000	0.00	0.00	0.00	3.34
1314	1388	5.770162	CCAATTTAGGGTTTAGCTATCAGGG	59.230	44.000	0.00	0.00	0.00	4.45
1463	1537	2.366916	ACTGGGTCAGCTCATATACTGC	59.633	50.000	0.00	0.00	34.37	4.40
1551	1633	7.871853	CAATCAACAGATCAGATTGCATCATA	58.128	34.615	13.50	0.00	41.24	2.15
1575	1657	3.393278	AGCAGTAAACAGGGGAAACTACA	59.607	43.478	0.00	0.00	0.00	2.74
1597	1679	6.605471	TCCTCTGAGTAGCATTGAAAGTAA	57.395	37.500	3.66	0.00	0.00	2.24
1603	1685	7.609097	AAATAGATCCTCTGAGTAGCATTGA	57.391	36.000	3.66	0.00	0.00	2.57
1612	1694	4.021544	AGCCGCTAAAATAGATCCTCTGAG	60.022	45.833	0.00	0.00	0.00	3.35
1622	1704	3.074412	CCCATACCAGCCGCTAAAATAG	58.926	50.000	0.00	0.00	0.00	1.73
1631	1713	2.895372	GAACGCCCATACCAGCCG	60.895	66.667	0.00	0.00	0.00	5.52
1639	1721	2.760092	ACTTGCATTATTGAACGCCCAT	59.240	40.909	0.00	0.00	0.00	4.00
1666	1748	8.241367	GTCCCTAACATTCATACAAACGATTTT	58.759	33.333	0.00	0.00	0.00	1.82
1670	1752	6.045072	AGTCCCTAACATTCATACAAACGA	57.955	37.500	0.00	0.00	0.00	3.85
1678	1760	9.628500	GAATAACCTTAAGTCCCTAACATTCAT	57.372	33.333	0.97	0.00	0.00	2.57
1685	1767	8.662255	TGAGTTTGAATAACCTTAAGTCCCTAA	58.338	33.333	0.97	0.00	0.00	2.69
1686	1768	8.209802	TGAGTTTGAATAACCTTAAGTCCCTA	57.790	34.615	0.97	0.00	0.00	3.53
1687	1769	7.086685	TGAGTTTGAATAACCTTAAGTCCCT	57.913	36.000	0.97	0.00	0.00	4.20
1688	1770	7.754851	TTGAGTTTGAATAACCTTAAGTCCC	57.245	36.000	0.97	0.00	0.00	4.46
1689	1771	8.847196	ACTTTGAGTTTGAATAACCTTAAGTCC	58.153	33.333	0.97	0.00	0.00	3.85
1690	1772	9.665264	CACTTTGAGTTTGAATAACCTTAAGTC	57.335	33.333	0.97	0.00	0.00	3.01
1691	1773	9.403583	TCACTTTGAGTTTGAATAACCTTAAGT	57.596	29.630	0.97	0.00	0.00	2.24
1692	1774	9.884465	CTCACTTTGAGTTTGAATAACCTTAAG	57.116	33.333	0.00	0.00	39.58	1.85
1745	1827	5.676744	CACATATAACACGCTGTACAATTGC	59.323	40.000	5.05	0.00	0.00	3.56
1749	1831	3.619483	GCCACATATAACACGCTGTACAA	59.381	43.478	0.00	0.00	0.00	2.41
1764	1846	5.039920	AGCACATCAGAATAAGCCACATA	57.960	39.130	0.00	0.00	0.00	2.29
1765	1847	3.894759	AGCACATCAGAATAAGCCACAT	58.105	40.909	0.00	0.00	0.00	3.21
1784	1866	9.989869	GGATAACTTTCACAAGAGTAATTTAGC	57.010	33.333	0.00	0.00	33.72	3.09
1941	2118	7.013083	ACACTGTTACTCTAGAAGTCGAAAAGA	59.987	37.037	0.00	0.00	39.55	2.52
2020	2197	7.072030	GCTGTCAATATAACACCGAATTCATC	58.928	38.462	6.22	0.00	0.00	2.92
2029	2206	3.885297	AGGCATGCTGTCAATATAACACC	59.115	43.478	18.92	0.00	0.00	4.16
2093	2270	3.834231	CAGATTTTGTTCAGGGGGTTCAT	59.166	43.478	0.00	0.00	0.00	2.57
2309	2486	8.498054	AACAGGAACACACATATTTCATAGAG	57.502	34.615	0.00	0.00	0.00	2.43
2377	2554	2.090943	ACATTATGGGACGGAGGGAGTA	60.091	50.000	0.00	0.00	0.00	2.59
2378	2555	1.344087	ACATTATGGGACGGAGGGAGT	60.344	52.381	0.00	0.00	0.00	3.85
2379	2556	1.424638	ACATTATGGGACGGAGGGAG	58.575	55.000	0.00	0.00	0.00	4.30
2380	2557	2.779429	TACATTATGGGACGGAGGGA	57.221	50.000	0.00	0.00	0.00	4.20
2381	2558	2.969950	TCTTACATTATGGGACGGAGGG	59.030	50.000	0.00	0.00	0.00	4.30
2382	2559	3.552273	CGTCTTACATTATGGGACGGAGG	60.552	52.174	20.50	5.87	43.69	4.30
2383	2560	3.639538	CGTCTTACATTATGGGACGGAG	58.360	50.000	20.50	2.74	43.69	4.63
2384	2561	3.720949	CGTCTTACATTATGGGACGGA	57.279	47.619	20.50	2.30	43.69	4.69
2411	2588	5.852229	CGTCTTTTGACTCTAGTGTAGTGTC	59.148	44.000	0.00	8.55	46.76	3.67
2412	2589	5.298777	ACGTCTTTTGACTCTAGTGTAGTGT	59.701	40.000	0.00	0.00	46.76	3.55
2413	2590	5.759963	ACGTCTTTTGACTCTAGTGTAGTG	58.240	41.667	0.00	0.00	46.76	2.74
2414	2591	5.764192	AGACGTCTTTTGACTCTAGTGTAGT	59.236	40.000	13.58	0.00	46.76	2.73
2415	2592	6.243811	AGACGTCTTTTGACTCTAGTGTAG	57.756	41.667	13.58	0.00	46.76	2.74
2416	2593	6.630444	AAGACGTCTTTTGACTCTAGTGTA	57.370	37.500	24.93	0.00	46.76	2.90
2417	2594	5.517322	AAGACGTCTTTTGACTCTAGTGT	57.483	39.130	24.93	0.00	46.76	3.55
2418	2595	6.436261	TGTAAGACGTCTTTTGACTCTAGTG	58.564	40.000	33.82	0.00	46.76	2.74
2419	2596	6.630444	TGTAAGACGTCTTTTGACTCTAGT	57.370	37.500	33.82	9.56	46.76	2.57
2420	2597	9.790389	ATAATGTAAGACGTCTTTTGACTCTAG	57.210	33.333	33.82	0.00	46.76	2.43
2421	2598	9.569167	CATAATGTAAGACGTCTTTTGACTCTA	57.431	33.333	33.82	19.77	46.76	2.43
2422	2599	7.545965	CCATAATGTAAGACGTCTTTTGACTCT	59.454	37.037	33.82	18.52	46.76	3.24
2423	2600	7.201530	CCCATAATGTAAGACGTCTTTTGACTC	60.202	40.741	33.82	17.48	46.76	3.36
2424	2601	6.594159	CCCATAATGTAAGACGTCTTTTGACT	59.406	38.462	33.82	17.64	46.76	3.41
2425	2602	6.592607	TCCCATAATGTAAGACGTCTTTTGAC	59.407	38.462	33.82	25.38	45.55	3.18
2426	2603	6.592607	GTCCCATAATGTAAGACGTCTTTTGA	59.407	38.462	33.82	18.81	37.40	2.69
2427	2604	6.370442	TGTCCCATAATGTAAGACGTCTTTTG	59.630	38.462	33.82	20.03	37.40	2.44
2428	2605	6.469410	TGTCCCATAATGTAAGACGTCTTTT	58.531	36.000	33.82	23.87	37.40	2.27
2429	2606	6.045072	TGTCCCATAATGTAAGACGTCTTT	57.955	37.500	33.82	19.31	37.40	2.52
2430	2607	5.421056	TCTGTCCCATAATGTAAGACGTCTT	59.579	40.000	31.70	31.70	39.85	3.01
2431	2608	4.954202	TCTGTCCCATAATGTAAGACGTCT	59.046	41.667	13.58	13.58	0.00	4.18
2432	2609	5.258456	TCTGTCCCATAATGTAAGACGTC	57.742	43.478	7.70	7.70	0.00	4.34
2433	2610	4.099573	CCTCTGTCCCATAATGTAAGACGT	59.900	45.833	0.00	0.00	0.00	4.34
2434	2611	4.501571	CCCTCTGTCCCATAATGTAAGACG	60.502	50.000	0.00	0.00	0.00	4.18
2435	2612	4.654262	TCCCTCTGTCCCATAATGTAAGAC	59.346	45.833	0.00	0.00	0.00	3.01
2436	2613	4.890988	TCCCTCTGTCCCATAATGTAAGA	58.109	43.478	0.00	0.00	0.00	2.10
2437	2614	4.656112	ACTCCCTCTGTCCCATAATGTAAG	59.344	45.833	0.00	0.00	0.00	2.34
2438	2615	4.631234	ACTCCCTCTGTCCCATAATGTAA	58.369	43.478	0.00	0.00	0.00	2.41
2439	2616	4.280789	ACTCCCTCTGTCCCATAATGTA	57.719	45.455	0.00	0.00	0.00	2.29
2440	2617	3.136641	ACTCCCTCTGTCCCATAATGT	57.863	47.619	0.00	0.00	0.00	2.71
2441	2618	3.967326	TGTACTCCCTCTGTCCCATAATG	59.033	47.826	0.00	0.00	0.00	1.90
2442	2619	4.280789	TGTACTCCCTCTGTCCCATAAT	57.719	45.455	0.00	0.00	0.00	1.28
2443	2620	3.769189	TGTACTCCCTCTGTCCCATAA	57.231	47.619	0.00	0.00	0.00	1.90
2444	2621	3.206639	TCATGTACTCCCTCTGTCCCATA	59.793	47.826	0.00	0.00	0.00	2.74
2445	2622	2.023015	TCATGTACTCCCTCTGTCCCAT	60.023	50.000	0.00	0.00	0.00	4.00
2446	2623	1.361197	TCATGTACTCCCTCTGTCCCA	59.639	52.381	0.00	0.00	0.00	4.37
2447	2624	2.160721	TCATGTACTCCCTCTGTCCC	57.839	55.000	0.00	0.00	0.00	4.46
2448	2625	5.128827	TGTTTATCATGTACTCCCTCTGTCC	59.871	44.000	0.00	0.00	0.00	4.02
2449	2626	6.222038	TGTTTATCATGTACTCCCTCTGTC	57.778	41.667	0.00	0.00	0.00	3.51
2450	2627	6.814954	ATGTTTATCATGTACTCCCTCTGT	57.185	37.500	0.00	0.00	35.19	3.41
2451	2628	7.050377	ACAATGTTTATCATGTACTCCCTCTG	58.950	38.462	0.00	0.00	36.81	3.35
2452	2629	7.092891	TGACAATGTTTATCATGTACTCCCTCT	60.093	37.037	0.00	0.00	36.81	3.69
2453	2630	7.047891	TGACAATGTTTATCATGTACTCCCTC	58.952	38.462	0.00	0.00	36.81	4.30
2454	2631	6.957631	TGACAATGTTTATCATGTACTCCCT	58.042	36.000	0.00	0.00	36.81	4.20
2455	2632	7.624360	TTGACAATGTTTATCATGTACTCCC	57.376	36.000	0.00	0.00	36.81	4.30
2456	2633	9.906660	TTTTTGACAATGTTTATCATGTACTCC	57.093	29.630	0.00	0.00	36.81	3.85
2483	2660	4.576216	TTTCCGCAGTTTAGCATTTTGA	57.424	36.364	0.00	0.00	0.00	2.69
2508	2686	1.661341	GAGGATGGCAGCTAACACAG	58.339	55.000	1.50	0.00	0.00	3.66
2741	2921	6.747125	ACATCAACACACAATGCAAGATAAA	58.253	32.000	0.00	0.00	0.00	1.40
2744	2924	4.521639	AGACATCAACACACAATGCAAGAT	59.478	37.500	0.00	0.00	0.00	2.40
2755	2935	4.077300	AGAAGCTCAAGACATCAACACA	57.923	40.909	0.00	0.00	0.00	3.72
2789	2969	4.916983	AGCAAAACAACAAGTATCAGCA	57.083	36.364	0.00	0.00	0.00	4.41
3010	3190	7.988599	TGTTGAGGCTTCTACTAACACTTTTTA	59.011	33.333	11.33	0.00	31.48	1.52
3016	3196	5.701290	ACAATGTTGAGGCTTCTACTAACAC	59.299	40.000	11.33	0.00	31.75	3.32
3039	3219	6.970484	ACAACAAGATGAATACTGGAAACAC	58.030	36.000	0.00	0.00	35.60	3.32
3048	3228	9.250624	GTCCATAGAGTACAACAAGATGAATAC	57.749	37.037	0.00	0.00	0.00	1.89
3211	3423	3.610911	GAAAGGATTCACCCTACACAGG	58.389	50.000	0.00	0.00	40.05	4.00
3456	3668	0.827368	TGGGGTTGCTTTGTGTTTCC	59.173	50.000	0.00	0.00	0.00	3.13
3508	3720	3.285484	GTCATCTGGAATGCCATCTTGT	58.715	45.455	0.00	0.00	44.91	3.16
3523	3735	4.641396	TCCTGTTGAATCGTTTGTCATCT	58.359	39.130	0.00	0.00	0.00	2.90
3542	3754	6.012421	AGGATTACAAGCTAACCTTTCTTCCT	60.012	38.462	0.00	0.00	0.00	3.36
3544	3756	6.879458	TCAGGATTACAAGCTAACCTTTCTTC	59.121	38.462	0.00	0.00	0.00	2.87
3559	3771	2.224744	TGGCAAGCAAGTCAGGATTACA	60.225	45.455	0.00	0.00	0.00	2.41
3560	3772	2.436417	TGGCAAGCAAGTCAGGATTAC	58.564	47.619	0.00	0.00	0.00	1.89
3607	3819	5.126396	AGAGAAACAAAACTATGCAAGGC	57.874	39.130	0.00	0.00	0.00	4.35
3611	3823	7.174772	TGCAATCTAGAGAAACAAAACTATGCA	59.825	33.333	0.00	0.00	34.55	3.96
3651	3928	3.721706	GCCAGCCAGCCAGGTAGT	61.722	66.667	0.00	0.00	40.61	2.73
3656	3933	3.714001	TGAGAGCCAGCCAGCCAG	61.714	66.667	0.00	0.00	0.00	4.85
3657	3934	4.025858	GTGAGAGCCAGCCAGCCA	62.026	66.667	0.00	0.00	0.00	4.75
3659	3936	2.507110	TAACGTGAGAGCCAGCCAGC	62.507	60.000	0.00	0.00	0.00	4.85
3660	3937	0.176680	ATAACGTGAGAGCCAGCCAG	59.823	55.000	0.00	0.00	0.00	4.85
3661	3938	0.108186	CATAACGTGAGAGCCAGCCA	60.108	55.000	0.00	0.00	0.00	4.75
3662	3939	1.432270	GCATAACGTGAGAGCCAGCC	61.432	60.000	0.00	0.00	0.00	4.85
3663	3940	1.432270	GGCATAACGTGAGAGCCAGC	61.432	60.000	13.03	0.00	44.59	4.85
3683	3960	0.645355	CTATGTTGCACACTACGCGG	59.355	55.000	12.47	0.00	0.00	6.46
3685	3962	2.285220	CCATCTATGTTGCACACTACGC	59.715	50.000	0.00	0.00	0.00	4.42
3687	3964	3.310774	CAGCCATCTATGTTGCACACTAC	59.689	47.826	0.00	0.00	0.00	2.73
3994	4282	1.067142	GCGTGTCCTGTATCACTTGGA	60.067	52.381	0.00	0.00	33.07	3.53
4120	4415	2.914097	ACCACTGGCAGCAAAGGC	60.914	61.111	15.89	0.00	41.61	4.35
4194	4489	3.198635	AGCTTCTGCCAGAGCTGTAAATA	59.801	43.478	15.01	0.00	40.80	1.40
4384	4679	1.648467	GATGGCCGAAGCTGTTGACC	61.648	60.000	0.00	0.00	39.73	4.02
4426	4721	3.192541	GAAGCTCATCTTCCCTCCTTC	57.807	52.381	0.00	0.00	44.22	3.46
4490	5416	1.281867	CTGGCTATGGACCCTGAACAA	59.718	52.381	0.00	0.00	0.00	2.83
4491	5417	0.911769	CTGGCTATGGACCCTGAACA	59.088	55.000	0.00	0.00	0.00	3.18
4492	5418	0.912486	ACTGGCTATGGACCCTGAAC	59.088	55.000	0.00	0.00	0.00	3.18
4513	5439	2.029288	CTGTGTACCGCTGCACTGG	61.029	63.158	0.00	0.00	36.63	4.00
4598	5528	5.185828	AGCCAACAGGATTTTTAATGACCTC	59.814	40.000	0.00	0.00	0.00	3.85
4612	5542	1.375908	GACGATGCAGCCAACAGGA	60.376	57.895	0.00	0.00	0.00	3.86
4613	5543	0.957395	AAGACGATGCAGCCAACAGG	60.957	55.000	0.00	0.00	0.00	4.00
4614	5544	0.877071	AAAGACGATGCAGCCAACAG	59.123	50.000	0.00	0.00	0.00	3.16
4616	5546	1.537202	AGAAAAGACGATGCAGCCAAC	59.463	47.619	0.00	0.00	0.00	3.77
4618	5548	1.536766	CAAGAAAAGACGATGCAGCCA	59.463	47.619	0.00	0.00	0.00	4.75
4621	5553	4.665142	CGAGTTCAAGAAAAGACGATGCAG	60.665	45.833	0.00	0.00	0.00	4.41
4628	5560	6.128795	CCAGATGTACGAGTTCAAGAAAAGAC	60.129	42.308	0.00	0.00	0.00	3.01
4650	5582	3.399330	TGAGAAGCGGTTTAGTTTCCAG	58.601	45.455	0.00	0.00	32.75	3.86
4660	5592	1.272490	TCGAGTTCATGAGAAGCGGTT	59.728	47.619	0.00	0.00	35.00	4.44
4662	5594	1.135257	ACTCGAGTTCATGAGAAGCGG	60.135	52.381	13.58	0.00	35.00	5.52
4663	5595	1.916651	CACTCGAGTTCATGAGAAGCG	59.083	52.381	17.26	0.00	36.11	4.68
4719	5653	1.865340	GAATAATTGCTCCCGACGGAC	59.135	52.381	17.49	4.94	33.32	4.79
4742	5676	1.067416	GATCGGATGCGTGCCTGTA	59.933	57.895	6.49	0.00	0.00	2.74
4743	5677	2.202932	GATCGGATGCGTGCCTGT	60.203	61.111	6.49	0.00	0.00	4.00
4746	5696	1.301244	ATCAGATCGGATGCGTGCC	60.301	57.895	7.61	0.00	0.00	5.01
4766	5716	0.940126	GTATGTTGGGCAGCGAGATG	59.060	55.000	0.00	0.00	0.00	2.90
4772	5722	3.876198	CGGCGTATGTTGGGCAGC	61.876	66.667	0.00	0.00	0.00	5.25
4809	5759	1.345176	CGGACGAAAGAAGCGATGC	59.655	57.895	0.00	0.00	0.00	3.91
4810	5760	0.640768	GACGGACGAAAGAAGCGATG	59.359	55.000	0.00	0.00	0.00	3.84
4811	5761	0.797249	CGACGGACGAAAGAAGCGAT	60.797	55.000	0.00	0.00	45.77	4.58
4813	5763	2.434134	CCGACGGACGAAAGAAGCG	61.434	63.158	8.64	0.00	45.77	4.68
4814	5764	0.109597	TACCGACGGACGAAAGAAGC	60.110	55.000	23.38	0.00	45.77	3.86
4839	5810	4.530857	GACGTCTCGGCCCATGGG	62.531	72.222	27.87	27.87	38.57	4.00
4951	5922	1.398692	GGGGAAACAAGACAAGCACA	58.601	50.000	0.00	0.00	0.00	4.57
4952	5923	0.310854	CGGGGAAACAAGACAAGCAC	59.689	55.000	0.00	0.00	0.00	4.40
4953	5924	0.821711	CCGGGGAAACAAGACAAGCA	60.822	55.000	0.00	0.00	0.00	3.91
4987	5987	3.416382	TAAACGTTCGGCGCTGGC	61.416	61.111	17.88	8.99	46.11	4.85
5064	6065	7.386848	GTGCTACTGTAATTTCTACCTCAACAA	59.613	37.037	0.00	0.00	0.00	2.83
5069	6070	5.648572	ACGTGCTACTGTAATTTCTACCTC	58.351	41.667	0.00	0.00	0.00	3.85
5073	6074	5.773239	GCAACGTGCTACTGTAATTTCTA	57.227	39.130	0.00	0.00	40.96	2.10
5074	6075	4.663636	GCAACGTGCTACTGTAATTTCT	57.336	40.909	0.00	0.00	40.96	2.52
5087	6088	1.009675	CACAGTGGAAGCAACGTGC	60.010	57.895	0.00	0.00	45.46	5.34
5088	6089	0.304705	GTCACAGTGGAAGCAACGTG	59.695	55.000	0.00	0.00	0.00	4.49
5089	6090	0.178068	AGTCACAGTGGAAGCAACGT	59.822	50.000	0.00	0.00	0.00	3.99
5090	6091	0.583438	CAGTCACAGTGGAAGCAACG	59.417	55.000	0.00	0.00	0.00	4.10
5091	6092	1.331756	CACAGTCACAGTGGAAGCAAC	59.668	52.381	0.00	0.00	33.43	4.17
5092	6093	1.667236	CACAGTCACAGTGGAAGCAA	58.333	50.000	0.00	0.00	33.43	3.91
5100	6101	0.687354	GACCCATCCACAGTCACAGT	59.313	55.000	0.00	0.00	0.00	3.55
5101	6102	0.979665	AGACCCATCCACAGTCACAG	59.020	55.000	0.00	0.00	32.82	3.66
5102	6103	1.899814	GTAGACCCATCCACAGTCACA	59.100	52.381	0.00	0.00	32.82	3.58
5103	6104	2.180276	AGTAGACCCATCCACAGTCAC	58.820	52.381	0.00	0.00	32.82	3.67
5104	6105	2.567169	CAAGTAGACCCATCCACAGTCA	59.433	50.000	0.00	0.00	32.82	3.41
5111	6135	1.068741	CCGTAGCAAGTAGACCCATCC	59.931	57.143	0.00	0.00	0.00	3.51
5155	6179	4.093998	CCAGTACTACGACTATCACAACGT	59.906	45.833	0.00	0.00	41.66	3.99
5159	6183	5.363101	CCTACCAGTACTACGACTATCACA	58.637	45.833	0.00	0.00	0.00	3.58
5167	6191	1.134401	CCGTCCCTACCAGTACTACGA	60.134	57.143	12.44	0.00	0.00	3.43
5168	6192	1.303309	CCGTCCCTACCAGTACTACG	58.697	60.000	0.00	0.00	0.00	3.51
5169	6193	2.019984	CACCGTCCCTACCAGTACTAC	58.980	57.143	0.00	0.00	0.00	2.73
5170	6194	1.915489	TCACCGTCCCTACCAGTACTA	59.085	52.381	0.00	0.00	0.00	1.82
5171	6195	0.700564	TCACCGTCCCTACCAGTACT	59.299	55.000	0.00	0.00	0.00	2.73
5172	6196	1.101331	CTCACCGTCCCTACCAGTAC	58.899	60.000	0.00	0.00	0.00	2.73
5173	6197	0.033796	CCTCACCGTCCCTACCAGTA	60.034	60.000	0.00	0.00	0.00	2.74
5180	6204	3.314331	CACAGCCTCACCGTCCCT	61.314	66.667	0.00	0.00	0.00	4.20
5192	6216	1.429463	GTGGTACAGTACAGCACAGC	58.571	55.000	12.89	0.00	41.80	4.40
5197	6221	1.804326	CGCCGTGGTACAGTACAGC	60.804	63.158	12.89	8.29	41.80	4.40
5201	6225	2.703798	GCCTCGCCGTGGTACAGTA	61.704	63.158	7.09	0.00	41.80	2.74
5202	6226	4.065281	GCCTCGCCGTGGTACAGT	62.065	66.667	7.09	0.00	41.80	3.55
5203	6227	4.063967	TGCCTCGCCGTGGTACAG	62.064	66.667	7.09	0.00	41.80	2.74
5204	6228	4.367023	GTGCCTCGCCGTGGTACA	62.367	66.667	19.22	1.81	39.48	2.90
5224	6248	3.717400	ACGTACTATCATCAGGTGCAG	57.283	47.619	0.00	0.00	0.00	4.41
5246	6270	0.869730	ATTGTCCGGGAAAAACGTCG	59.130	50.000	3.22	0.00	0.00	5.12
5247	6271	4.690184	AATATTGTCCGGGAAAAACGTC	57.310	40.909	3.22	0.00	0.00	4.34
5248	6272	4.378666	CGAAATATTGTCCGGGAAAAACGT	60.379	41.667	3.22	0.00	0.00	3.99
5249	6273	4.092816	CGAAATATTGTCCGGGAAAAACG	58.907	43.478	3.22	2.32	0.00	3.60
5250	6274	4.854839	CACGAAATATTGTCCGGGAAAAAC	59.145	41.667	3.22	0.00	0.00	2.43
5251	6275	4.082679	CCACGAAATATTGTCCGGGAAAAA	60.083	41.667	3.22	0.00	0.00	1.94
5252	6276	3.440872	CCACGAAATATTGTCCGGGAAAA	59.559	43.478	1.25	1.25	0.00	2.29
5253	6277	3.011119	CCACGAAATATTGTCCGGGAAA	58.989	45.455	0.00	0.00	0.00	3.13
5254	6278	2.634600	CCACGAAATATTGTCCGGGAA	58.365	47.619	0.00	0.00	0.00	3.97
5255	6279	1.134340	CCCACGAAATATTGTCCGGGA	60.134	52.381	0.00	0.00	30.67	5.14
5256	6280	1.305201	CCCACGAAATATTGTCCGGG	58.695	55.000	0.00	5.61	0.00	5.73
5257	6281	1.305201	CCCCACGAAATATTGTCCGG	58.695	55.000	0.00	0.00	0.00	5.14
5258	6282	2.032680	ACCCCACGAAATATTGTCCG	57.967	50.000	0.00	0.00	0.00	4.79
5259	6283	4.461431	AGAAAACCCCACGAAATATTGTCC	59.539	41.667	0.00	0.00	0.00	4.02
5260	6284	5.638596	AGAAAACCCCACGAAATATTGTC	57.361	39.130	0.00	0.00	0.00	3.18
5261	6285	6.413783	AAAGAAAACCCCACGAAATATTGT	57.586	33.333	0.00	0.00	0.00	2.71
5262	6286	6.367695	GGAAAAGAAAACCCCACGAAATATTG	59.632	38.462	0.00	0.00	0.00	1.90
5263	6287	6.460781	GGAAAAGAAAACCCCACGAAATATT	58.539	36.000	0.00	0.00	0.00	1.28
5264	6288	5.336134	CGGAAAAGAAAACCCCACGAAATAT	60.336	40.000	0.00	0.00	0.00	1.28
5265	6289	4.023021	CGGAAAAGAAAACCCCACGAAATA	60.023	41.667	0.00	0.00	0.00	1.40
5266	6290	3.243602	CGGAAAAGAAAACCCCACGAAAT	60.244	43.478	0.00	0.00	0.00	2.17
5267	6291	2.099427	CGGAAAAGAAAACCCCACGAAA	59.901	45.455	0.00	0.00	0.00	3.46
5268	6292	1.677052	CGGAAAAGAAAACCCCACGAA	59.323	47.619	0.00	0.00	0.00	3.85
5269	6293	1.310904	CGGAAAAGAAAACCCCACGA	58.689	50.000	0.00	0.00	0.00	4.35
5270	6294	0.312729	CCGGAAAAGAAAACCCCACG	59.687	55.000	0.00	0.00	0.00	4.94
5271	6295	0.032952	GCCGGAAAAGAAAACCCCAC	59.967	55.000	5.05	0.00	0.00	4.61
5272	6296	0.397254	TGCCGGAAAAGAAAACCCCA	60.397	50.000	5.05	0.00	0.00	4.96
5273	6297	0.753867	TTGCCGGAAAAGAAAACCCC	59.246	50.000	5.05	0.00	0.00	4.95
5274	6298	1.872237	GCTTGCCGGAAAAGAAAACCC	60.872	52.381	18.59	0.00	0.00	4.11
5275	6299	1.202475	TGCTTGCCGGAAAAGAAAACC	60.202	47.619	18.59	3.95	0.00	3.27
5276	6300	2.127251	CTGCTTGCCGGAAAAGAAAAC	58.873	47.619	18.59	4.25	0.00	2.43
5277	6301	2.028130	TCTGCTTGCCGGAAAAGAAAA	58.972	42.857	18.59	0.00	0.00	2.29
5278	6302	1.686355	TCTGCTTGCCGGAAAAGAAA	58.314	45.000	18.59	7.09	0.00	2.52
5279	6303	1.541147	CATCTGCTTGCCGGAAAAGAA	59.459	47.619	18.59	9.23	31.26	2.52
5280	6304	1.167851	CATCTGCTTGCCGGAAAAGA	58.832	50.000	18.59	9.92	31.26	2.52
5281	6305	1.131883	CTCATCTGCTTGCCGGAAAAG	59.868	52.381	5.05	9.55	31.26	2.27
5282	6306	1.167851	CTCATCTGCTTGCCGGAAAA	58.832	50.000	5.05	0.00	31.26	2.29
5283	6307	0.324614	TCTCATCTGCTTGCCGGAAA	59.675	50.000	5.05	0.00	31.26	3.13
5284	6308	0.107993	CTCTCATCTGCTTGCCGGAA	60.108	55.000	5.05	0.00	31.26	4.30
5285	6309	1.519246	CTCTCATCTGCTTGCCGGA	59.481	57.895	5.05	0.00	0.00	5.14
5286	6310	1.523258	CCTCTCATCTGCTTGCCGG	60.523	63.158	0.00	0.00	0.00	6.13
5287	6311	0.107993	TTCCTCTCATCTGCTTGCCG	60.108	55.000	0.00	0.00	0.00	5.69
5288	6312	2.119801	TTTCCTCTCATCTGCTTGCC	57.880	50.000	0.00	0.00	0.00	4.52
5289	6313	3.341823	TCTTTTCCTCTCATCTGCTTGC	58.658	45.455	0.00	0.00	0.00	4.01
5290	6314	3.940221	CCTCTTTTCCTCTCATCTGCTTG	59.060	47.826	0.00	0.00	0.00	4.01
5291	6315	3.054508	CCCTCTTTTCCTCTCATCTGCTT	60.055	47.826	0.00	0.00	0.00	3.91
5292	6316	2.504996	CCCTCTTTTCCTCTCATCTGCT	59.495	50.000	0.00	0.00	0.00	4.24
5293	6317	2.916640	CCCTCTTTTCCTCTCATCTGC	58.083	52.381	0.00	0.00	0.00	4.26
5294	6318	2.741228	CGCCCTCTTTTCCTCTCATCTG	60.741	54.545	0.00	0.00	0.00	2.90
5295	6319	1.484240	CGCCCTCTTTTCCTCTCATCT	59.516	52.381	0.00	0.00	0.00	2.90
5296	6320	1.474143	CCGCCCTCTTTTCCTCTCATC	60.474	57.143	0.00	0.00	0.00	2.92
5297	6321	0.543749	CCGCCCTCTTTTCCTCTCAT	59.456	55.000	0.00	0.00	0.00	2.90
5298	6322	1.553690	CCCGCCCTCTTTTCCTCTCA	61.554	60.000	0.00	0.00	0.00	3.27
5299	6323	1.222113	CCCGCCCTCTTTTCCTCTC	59.778	63.158	0.00	0.00	0.00	3.20
5300	6324	2.972819	GCCCGCCCTCTTTTCCTCT	61.973	63.158	0.00	0.00	0.00	3.69
5301	6325	2.438614	GCCCGCCCTCTTTTCCTC	60.439	66.667	0.00	0.00	0.00	3.71
5302	6326	4.410400	CGCCCGCCCTCTTTTCCT	62.410	66.667	0.00	0.00	0.00	3.36
5329	6353	4.771356	TTCGACGGCGGCGAAGAG	62.771	66.667	42.78	23.23	42.17	2.85
5335	6359	2.895372	ATTGGATTCGACGGCGGC	60.895	61.111	12.58	7.52	38.28	6.53
5336	6360	3.014036	CATTGGATTCGACGGCGG	58.986	61.111	12.58	0.00	38.28	6.13
5337	6361	2.324477	GCATTGGATTCGACGGCG	59.676	61.111	2.87	2.87	39.35	6.46
5338	6362	1.977594	AACGCATTGGATTCGACGGC	61.978	55.000	0.00	0.00	0.00	5.68
5339	6363	0.026285	GAACGCATTGGATTCGACGG	59.974	55.000	0.00	0.00	0.00	4.79
5340	6364	0.314259	CGAACGCATTGGATTCGACG	60.314	55.000	0.00	0.00	46.28	5.12
5341	6365	0.719465	ACGAACGCATTGGATTCGAC	59.281	50.000	12.10	0.00	46.28	4.20
5342	6366	0.996462	GACGAACGCATTGGATTCGA	59.004	50.000	12.10	0.00	46.28	3.71
5344	6368	1.327764	GAGGACGAACGCATTGGATTC	59.672	52.381	0.00	0.00	0.00	2.52
5345	6369	1.369625	GAGGACGAACGCATTGGATT	58.630	50.000	0.00	0.00	0.00	3.01
5346	6370	0.462047	GGAGGACGAACGCATTGGAT	60.462	55.000	0.00	0.00	0.00	3.41
5347	6371	1.079405	GGAGGACGAACGCATTGGA	60.079	57.895	0.00	0.00	0.00	3.53
5348	6372	2.106683	GGGAGGACGAACGCATTGG	61.107	63.158	0.00	0.00	0.00	3.16
5349	6373	0.744414	ATGGGAGGACGAACGCATTG	60.744	55.000	0.00	0.00	36.54	2.82
5350	6374	0.828022	TATGGGAGGACGAACGCATT	59.172	50.000	0.00	0.00	39.61	3.56
5351	6375	0.104304	GTATGGGAGGACGAACGCAT	59.896	55.000	0.00	0.00	41.27	4.73
5352	6376	1.514087	GTATGGGAGGACGAACGCA	59.486	57.895	0.00	0.00	0.00	5.24
5353	6377	1.227176	GGTATGGGAGGACGAACGC	60.227	63.158	0.00	0.00	0.00	4.84
5354	6378	1.065273	CGGTATGGGAGGACGAACG	59.935	63.158	0.00	0.00	0.00	3.95
5355	6379	0.179119	CACGGTATGGGAGGACGAAC	60.179	60.000	0.00	0.00	0.00	3.95
5356	6380	0.612732	ACACGGTATGGGAGGACGAA	60.613	55.000	0.00	0.00	0.00	3.85
5357	6381	1.000521	ACACGGTATGGGAGGACGA	60.001	57.895	0.00	0.00	0.00	4.20
5358	6382	1.141019	CACACGGTATGGGAGGACG	59.859	63.158	0.00	0.00	30.67	4.79
5359	6383	0.108329	CACACACGGTATGGGAGGAC	60.108	60.000	0.00	0.00	34.14	3.85
5360	6384	0.543410	ACACACACGGTATGGGAGGA	60.543	55.000	0.00	0.00	34.14	3.71
5361	6385	0.391130	CACACACACGGTATGGGAGG	60.391	60.000	0.00	0.00	34.14	4.30
5362	6386	0.320374	ACACACACACGGTATGGGAG	59.680	55.000	0.00	0.00	34.14	4.30
5363	6387	0.319083	GACACACACACGGTATGGGA	59.681	55.000	0.00	0.00	34.14	4.37
5364	6388	0.672401	GGACACACACACGGTATGGG	60.672	60.000	0.00	0.00	37.93	4.00
5365	6389	0.672401	GGGACACACACACGGTATGG	60.672	60.000	0.00	0.00	0.00	2.74
5366	6390	1.011968	CGGGACACACACACGGTATG	61.012	60.000	0.00	0.00	0.00	2.39
5367	6391	1.290955	CGGGACACACACACGGTAT	59.709	57.895	0.00	0.00	0.00	2.73
5368	6392	2.729455	CGGGACACACACACGGTA	59.271	61.111	0.00	0.00	0.00	4.02
5369	6393	4.903010	GCGGGACACACACACGGT	62.903	66.667	0.00	0.00	0.00	4.83
5371	6395	4.901123	TGGCGGGACACACACACG	62.901	66.667	0.00	0.00	0.00	4.49
5372	6396	3.276846	GTGGCGGGACACACACAC	61.277	66.667	0.00	0.00	40.99	3.82
5373	6397	2.544590	AAAGTGGCGGGACACACACA	62.545	55.000	7.51	0.00	43.72	3.72
5374	6398	1.381165	AAAAGTGGCGGGACACACAC	61.381	55.000	7.51	0.00	43.72	3.82
5375	6399	0.681564	AAAAAGTGGCGGGACACACA	60.682	50.000	7.51	0.00	43.72	3.72
5376	6400	0.030235	GAAAAAGTGGCGGGACACAC	59.970	55.000	7.51	0.00	43.72	3.82
5377	6401	0.394488	TGAAAAAGTGGCGGGACACA	60.394	50.000	7.51	0.00	43.72	3.72
5378	6402	0.030235	GTGAAAAAGTGGCGGGACAC	59.970	55.000	0.00	0.00	41.63	3.67
5379	6403	0.394488	TGTGAAAAAGTGGCGGGACA	60.394	50.000	0.00	0.00	0.00	4.02
5380	6404	0.958822	ATGTGAAAAAGTGGCGGGAC	59.041	50.000	0.00	0.00	0.00	4.46
5381	6405	1.243902	GATGTGAAAAAGTGGCGGGA	58.756	50.000	0.00	0.00	0.00	5.14
5382	6406	0.109781	CGATGTGAAAAAGTGGCGGG	60.110	55.000	0.00	0.00	0.00	6.13
5383	6407	0.729140	GCGATGTGAAAAAGTGGCGG	60.729	55.000	0.00	0.00	0.00	6.13
5384	6408	1.059657	CGCGATGTGAAAAAGTGGCG	61.060	55.000	0.00	0.00	36.29	5.69
5385	6409	1.337110	GCGCGATGTGAAAAAGTGGC	61.337	55.000	12.10	0.00	0.00	5.01
5386	6410	0.238289	AGCGCGATGTGAAAAAGTGG	59.762	50.000	12.10	0.00	0.00	4.00
5387	6411	1.321016	CAGCGCGATGTGAAAAAGTG	58.679	50.000	17.73	0.00	0.00	3.16
5388	6412	0.944386	ACAGCGCGATGTGAAAAAGT	59.056	45.000	31.20	0.61	30.46	2.66
5389	6413	3.753774	ACAGCGCGATGTGAAAAAG	57.246	47.368	31.20	0.00	30.46	2.27
5396	6420	2.657757	CGTTGACACAGCGCGATGT	61.658	57.895	26.39	26.39	30.83	3.06
5397	6421	1.341369	TACGTTGACACAGCGCGATG	61.341	55.000	24.69	24.69	41.50	3.84
5398	6422	1.071019	CTACGTTGACACAGCGCGAT	61.071	55.000	12.10	0.00	41.50	4.58
5399	6423	1.728074	CTACGTTGACACAGCGCGA	60.728	57.895	12.10	0.00	41.50	5.87
5400	6424	0.726787	TACTACGTTGACACAGCGCG	60.727	55.000	0.00	0.00	41.50	6.86
5401	6425	0.982673	CTACTACGTTGACACAGCGC	59.017	55.000	0.00	0.00	41.50	5.92
5402	6426	2.327081	ACTACTACGTTGACACAGCG	57.673	50.000	3.44	6.47	43.29	5.18
5403	6427	4.416505	ACTACTACTACGTTGACACAGC	57.583	45.455	3.44	0.00	0.00	4.40
5404	6428	6.718454	ACTACTACTACTACGTTGACACAG	57.282	41.667	3.44	0.00	0.00	3.66
5405	6429	7.872993	AGTTACTACTACTACTACGTTGACACA	59.127	37.037	3.44	0.00	31.21	3.72
5406	6430	8.245701	AGTTACTACTACTACTACGTTGACAC	57.754	38.462	3.44	0.00	31.21	3.67
5407	6431	8.833231	AAGTTACTACTACTACTACGTTGACA	57.167	34.615	3.44	0.00	33.17	3.58

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.