Multiple sequence alignment - TraesCS5A01G402700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G402700 chr5A 100.000 7031 0 0 1 7031 595379294 595372264 0.000000e+00 12984.0
1 TraesCS5A01G402700 chr5B 91.084 2232 117 38 2995 5195 583207526 583205346 0.000000e+00 2944.0
2 TraesCS5A01G402700 chr5B 88.347 1107 109 12 5243 6342 583205340 583204247 0.000000e+00 1312.0
3 TraesCS5A01G402700 chr5B 94.422 753 38 2 1508 2259 583208965 583208216 0.000000e+00 1155.0
4 TraesCS5A01G402700 chr5B 90.027 742 54 10 779 1511 583209797 583209067 0.000000e+00 942.0
5 TraesCS5A01G402700 chr5B 89.812 746 54 10 3246 3972 689258775 689258033 0.000000e+00 937.0
6 TraesCS5A01G402700 chr5B 92.926 622 38 3 4578 5195 689258036 689257417 0.000000e+00 900.0
7 TraesCS5A01G402700 chr5B 91.099 573 37 8 2421 2979 583208146 583207574 0.000000e+00 763.0
8 TraesCS5A01G402700 chr5B 92.906 437 27 1 4763 5195 28669409 28669845 3.580000e-177 632.0
9 TraesCS5A01G402700 chr5B 91.927 384 14 7 6651 7031 583203770 583203401 8.080000e-144 521.0
10 TraesCS5A01G402700 chr5B 91.473 258 14 4 1 256 583212563 583212312 1.450000e-91 348.0
11 TraesCS5A01G402700 chr5B 87.156 218 14 3 5268 5485 689257397 689257194 1.180000e-57 235.0
12 TraesCS5A01G402700 chr5B 90.667 150 12 2 255 403 583212208 583212060 1.550000e-46 198.0
13 TraesCS5A01G402700 chr5B 91.150 113 6 4 6370 6480 583204178 583204068 4.390000e-32 150.0
14 TraesCS5A01G402700 chr5B 90.667 75 5 1 601 673 338943541 338943467 1.610000e-16 99.0
15 TraesCS5A01G402700 chr5D 93.264 1529 62 13 3733 5234 475841214 475839700 0.000000e+00 2215.0
16 TraesCS5A01G402700 chr5D 92.473 930 59 4 796 1715 475844326 475843398 0.000000e+00 1319.0
17 TraesCS5A01G402700 chr5D 87.287 1054 107 15 5300 6342 475839688 475838651 0.000000e+00 1179.0
18 TraesCS5A01G402700 chr5D 89.318 777 57 14 3046 3804 475841987 475841219 0.000000e+00 952.0
19 TraesCS5A01G402700 chr5D 90.895 637 38 14 2362 2979 475843162 475842527 0.000000e+00 837.0
20 TraesCS5A01G402700 chr5D 95.833 384 12 3 6652 7031 475838173 475837790 1.000000e-172 617.0
21 TraesCS5A01G402700 chr5D 84.926 272 26 5 323 581 475844716 475844447 1.950000e-65 261.0
22 TraesCS5A01G402700 chr5D 92.949 156 9 2 1712 1865 475843318 475843163 7.100000e-55 226.0
23 TraesCS5A01G402700 chr7D 91.667 780 42 11 3212 3972 7979678 7978903 0.000000e+00 1059.0
24 TraesCS5A01G402700 chr7D 92.937 623 38 4 4578 5195 7978906 7978285 0.000000e+00 902.0
25 TraesCS5A01G402700 chr7D 87.156 218 13 4 5268 5485 7978265 7978063 4.240000e-57 233.0
26 TraesCS5A01G402700 chr7A 94.030 670 34 6 3212 3877 731414718 731414051 0.000000e+00 1011.0
27 TraesCS5A01G402700 chr1A 94.170 669 29 8 3212 3874 416019539 416020203 0.000000e+00 1011.0
28 TraesCS5A01G402700 chr1A 88.288 111 6 3 5375 5485 416020308 416020411 7.400000e-25 126.0
29 TraesCS5A01G402700 chr1A 87.671 73 8 1 108 179 493548733 493548805 4.520000e-12 84.2
30 TraesCS5A01G402700 chr4A 94.039 671 31 7 3212 3877 363136613 363137279 0.000000e+00 1009.0
31 TraesCS5A01G402700 chr4A 94.332 494 24 1 4706 5195 363137285 363137778 0.000000e+00 754.0
32 TraesCS5A01G402700 chr4A 88.073 218 12 3 5268 5485 363137798 363138001 5.450000e-61 246.0
33 TraesCS5A01G402700 chr3A 94.039 671 31 7 3212 3877 108577936 108578602 0.000000e+00 1009.0
34 TraesCS5A01G402700 chr3A 89.189 111 5 3 5375 5485 108578704 108578807 1.590000e-26 132.0
35 TraesCS5A01G402700 chr3A 86.486 74 9 1 107 179 93991392 93991319 5.850000e-11 80.5
36 TraesCS5A01G402700 chr3B 89.853 749 49 13 3245 3972 546381269 546380527 0.000000e+00 937.0
37 TraesCS5A01G402700 chr3B 92.605 622 41 2 4578 5195 546380530 546379910 0.000000e+00 889.0
38 TraesCS5A01G402700 chr3B 92.308 624 41 3 4578 5195 56218141 56217519 0.000000e+00 880.0
39 TraesCS5A01G402700 chr3B 89.450 218 9 3 5268 5485 546379890 546379687 5.410000e-66 263.0
40 TraesCS5A01G402700 chr3B 87.615 218 13 3 5268 5485 56217499 56217296 2.530000e-59 241.0
41 TraesCS5A01G402700 chr3B 94.805 77 4 0 5268 5344 627445853 627445777 3.440000e-23 121.0
42 TraesCS5A01G402700 chr4B 92.960 625 39 2 4575 5195 667240474 667241097 0.000000e+00 905.0
43 TraesCS5A01G402700 chr4B 87.580 314 19 9 3677 3972 667240169 667240480 5.220000e-91 346.0
44 TraesCS5A01G402700 chr4B 87.097 217 12 6 5269 5485 667241118 667241318 1.530000e-56 231.0
45 TraesCS5A01G402700 chr7B 89.183 453 24 11 3540 3972 38034762 38034315 6.200000e-150 542.0
46 TraesCS5A01G402700 chr7B 91.667 72 5 1 598 668 702258361 702258432 1.610000e-16 99.0
47 TraesCS5A01G402700 chr6D 88.991 218 10 3 5268 5485 380598768 380598565 2.520000e-64 257.0
48 TraesCS5A01G402700 chr6B 94.737 76 4 0 5268 5343 23482462 23482387 1.240000e-22 119.0
49 TraesCS5A01G402700 chr2A 86.905 84 8 3 600 682 94164838 94164757 2.700000e-14 91.6
50 TraesCS5A01G402700 chr2A 87.838 74 8 1 107 179 744069777 744069850 1.260000e-12 86.1
51 TraesCS5A01G402700 chr2A 87.671 73 8 1 108 179 744070052 744070124 4.520000e-12 84.2
52 TraesCS5A01G402700 chr3D 93.182 44 3 0 108 151 89626263 89626306 1.640000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G402700 chr5A 595372264 595379294 7030 True 12984.000000 12984 100.000000 1 7031 1 chr5A.!!$R1 7030
1 TraesCS5A01G402700 chr5B 583203401 583212563 9162 True 925.888889 2944 91.132889 1 7031 9 chr5B.!!$R2 7030
2 TraesCS5A01G402700 chr5B 689257194 689258775 1581 True 690.666667 937 89.964667 3246 5485 3 chr5B.!!$R3 2239
3 TraesCS5A01G402700 chr5D 475837790 475844716 6926 True 950.750000 2215 90.868125 323 7031 8 chr5D.!!$R1 6708
4 TraesCS5A01G402700 chr7D 7978063 7979678 1615 True 731.333333 1059 90.586667 3212 5485 3 chr7D.!!$R1 2273
5 TraesCS5A01G402700 chr7A 731414051 731414718 667 True 1011.000000 1011 94.030000 3212 3877 1 chr7A.!!$R1 665
6 TraesCS5A01G402700 chr1A 416019539 416020411 872 False 568.500000 1011 91.229000 3212 5485 2 chr1A.!!$F2 2273
7 TraesCS5A01G402700 chr4A 363136613 363138001 1388 False 669.666667 1009 92.148000 3212 5485 3 chr4A.!!$F1 2273
8 TraesCS5A01G402700 chr3A 108577936 108578807 871 False 570.500000 1009 91.614000 3212 5485 2 chr3A.!!$F1 2273
9 TraesCS5A01G402700 chr3B 546379687 546381269 1582 True 696.333333 937 90.636000 3245 5485 3 chr3B.!!$R3 2240
10 TraesCS5A01G402700 chr3B 56217296 56218141 845 True 560.500000 880 89.961500 4578 5485 2 chr3B.!!$R2 907
11 TraesCS5A01G402700 chr4B 667240169 667241318 1149 False 494.000000 905 89.212333 3677 5485 3 chr4B.!!$F1 1808

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
766 2816 0.031616 TTTTTGTGGGGAAGGGCAGT 60.032 50.0 0.00 0.0 0.00 4.40 F
2108 4386 0.454600 ATACGACTACACAGTGGCGG 59.545 55.0 5.31 0.0 34.06 6.13 F
2114 4392 0.458543 CTACACAGTGGCGGTGCTAG 60.459 60.0 5.31 0.0 39.87 3.42 F
2355 4633 0.532573 CTCCAAAGCTGCCTACTCGA 59.467 55.0 0.00 0.0 0.00 4.04 F
2970 5267 0.546122 GTGGGTGCCATGGATCTGTA 59.454 55.0 18.40 0.0 35.28 2.74 F
3029 5358 0.546122 TCCTGTGGAAGCAGTGTTGT 59.454 50.0 0.00 0.0 34.84 3.32 F
3030 5359 0.664761 CCTGTGGAAGCAGTGTTGTG 59.335 55.0 0.00 0.0 34.84 3.33 F
3034 5363 0.679321 TGGAAGCAGTGTTGTGTGCA 60.679 50.0 0.00 0.0 42.47 4.57 F
3041 5370 0.816825 AGTGTTGTGTGCAGCTCCAG 60.817 55.0 0.00 0.0 0.00 3.86 F
5016 7918 1.274703 TGATGACCCTCTCCCTTGCC 61.275 60.0 0.00 0.0 0.00 4.52 F
5895 8806 0.798159 TCACGCTGCTAAACATGCTG 59.202 50.0 0.00 0.0 0.00 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2336 4614 0.532573 TCGAGTAGGCAGCTTTGGAG 59.467 55.000 0.00 0.00 0.00 3.86 R
3016 5345 0.029834 CTGCACACAACACTGCTTCC 59.970 55.000 0.00 0.00 34.29 3.46 R
3673 6449 0.390603 TGGCATACAACCCTCGAACG 60.391 55.000 0.00 0.00 0.00 3.95 R
4086 6978 1.522258 GGCATGTTTTGTCAAAGTGCG 59.478 47.619 18.20 5.10 36.34 5.34 R
4883 7784 1.133790 AGATTGGCATTTGCTTCGAGC 59.866 47.619 2.12 0.58 42.82 5.03 R
5016 7918 2.810274 CCACATCAAGGATCCTAATGCG 59.190 50.000 26.14 20.21 0.00 4.73 R
5205 8111 7.873719 TCATAACCAAGAACAGTTTCTCAAA 57.126 32.000 0.00 0.00 41.56 2.69 R
5214 8120 7.097192 TGCTAGTACTTCATAACCAAGAACAG 58.903 38.462 0.00 0.00 0.00 3.16 R
5216 8122 7.603024 ACTTGCTAGTACTTCATAACCAAGAAC 59.397 37.037 0.00 0.00 33.39 3.01 R
5916 8827 0.179000 GCCACTCCAATGATCTCCGT 59.821 55.000 0.00 0.00 0.00 4.69 R
6854 10068 0.234884 CGTTTCAGTTCGGTTCAGGC 59.765 55.000 0.00 0.00 0.00 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 0.806492 GGGATGCTCGGTCGAAAGTC 60.806 60.000 0.00 0.00 0.00 3.01
42 43 3.617263 GCTCGGTCGAAAGTCATTGTATT 59.383 43.478 0.00 0.00 0.00 1.89
57 58 9.095065 AGTCATTGTATTTTATGTAACCGTCTC 57.905 33.333 0.00 0.00 0.00 3.36
84 85 5.581126 AGAAGCAAAACAAGACAACATCA 57.419 34.783 0.00 0.00 0.00 3.07
85 86 5.964758 AGAAGCAAAACAAGACAACATCAA 58.035 33.333 0.00 0.00 0.00 2.57
86 87 6.038356 AGAAGCAAAACAAGACAACATCAAG 58.962 36.000 0.00 0.00 0.00 3.02
88 89 6.152932 AGCAAAACAAGACAACATCAAGAT 57.847 33.333 0.00 0.00 0.00 2.40
89 90 5.981315 AGCAAAACAAGACAACATCAAGATG 59.019 36.000 8.45 8.45 44.15 2.90
90 91 5.332808 GCAAAACAAGACAACATCAAGATGC 60.333 40.000 9.85 0.00 42.39 3.91
91 92 4.510038 AACAAGACAACATCAAGATGCC 57.490 40.909 9.85 0.00 42.39 4.40
92 93 2.821969 ACAAGACAACATCAAGATGCCC 59.178 45.455 9.85 0.00 42.39 5.36
93 94 2.821378 CAAGACAACATCAAGATGCCCA 59.179 45.455 9.85 0.00 42.39 5.36
94 95 3.377253 AGACAACATCAAGATGCCCAT 57.623 42.857 9.85 0.00 42.39 4.00
95 96 3.705051 AGACAACATCAAGATGCCCATT 58.295 40.909 9.85 0.00 42.39 3.16
96 97 3.446161 AGACAACATCAAGATGCCCATTG 59.554 43.478 9.85 9.14 42.39 2.82
97 98 3.167485 ACAACATCAAGATGCCCATTGT 58.833 40.909 9.85 9.70 42.39 2.71
98 99 3.056393 ACAACATCAAGATGCCCATTGTG 60.056 43.478 9.85 1.06 42.39 3.33
99 100 2.104967 ACATCAAGATGCCCATTGTGG 58.895 47.619 9.85 0.00 42.39 4.17
158 159 5.875224 TCAGTGGAAACATGGAAACTCATA 58.125 37.500 0.00 0.00 46.14 2.15
159 160 6.484288 TCAGTGGAAACATGGAAACTCATAT 58.516 36.000 0.00 0.00 46.14 1.78
188 190 4.455877 CGTTGGATATGAAAATCTAGGGGC 59.544 45.833 0.00 0.00 0.00 5.80
212 214 0.318614 CACCCACAAACACATTCCGC 60.319 55.000 0.00 0.00 0.00 5.54
250 252 8.071177 AGCTTAGATCCTTTGTGCAAAATAAT 57.929 30.769 0.00 0.00 0.00 1.28
259 366 8.748412 TCCTTTGTGCAAAATAATAACTAGCAT 58.252 29.630 0.00 0.00 32.75 3.79
282 389 2.799978 GTGGGTGCTTGTATGCAAAAAC 59.200 45.455 0.00 0.00 45.12 2.43
283 390 2.432146 TGGGTGCTTGTATGCAAAAACA 59.568 40.909 0.00 0.00 45.12 2.83
288 396 4.803088 GTGCTTGTATGCAAAAACACAAGA 59.197 37.500 22.15 11.25 46.94 3.02
301 409 8.427774 GCAAAAACACAAGATTCAATAAGCTAC 58.572 33.333 0.00 0.00 29.25 3.58
318 426 3.767673 AGCTACCCACGTTTTAGATCTGA 59.232 43.478 5.18 0.00 0.00 3.27
319 427 4.406003 AGCTACCCACGTTTTAGATCTGAT 59.594 41.667 5.18 0.00 0.00 2.90
338 446 0.958091 TGGCTCATGTTTGGGTTTCG 59.042 50.000 0.00 0.00 0.00 3.46
349 457 1.611519 TGGGTTTCGATGTTTCCACC 58.388 50.000 0.00 0.00 0.00 4.61
356 464 3.880047 TCGATGTTTCCACCGAGTTAT 57.120 42.857 0.00 0.00 0.00 1.89
373 481 4.777463 AGTTATTGGTTTCCACGGGATAG 58.223 43.478 0.00 0.00 30.78 2.08
407 528 7.038729 TCCATTGTGTTTCTTCTACATCTCTCT 60.039 37.037 0.00 0.00 0.00 3.10
417 538 7.927788 TCTTCTACATCTCTCTCCTAGCATAT 58.072 38.462 0.00 0.00 0.00 1.78
462 583 8.258708 AGTTTTCTGTACTTTAGAGAGTGTGTT 58.741 33.333 0.00 0.00 29.15 3.32
472 593 8.475639 ACTTTAGAGAGTGTGTTGTCTCTTTAA 58.524 33.333 7.15 2.68 46.04 1.52
476 597 8.994429 AGAGAGTGTGTTGTCTCTTTAATATG 57.006 34.615 0.00 0.00 46.04 1.78
573 1806 9.777297 AGCATTTACCATAAACAAAGAACATTT 57.223 25.926 0.00 0.00 0.00 2.32
600 1833 9.134055 AGTAATTACTAGTACTCCCTTCATGTC 57.866 37.037 16.60 0.00 29.65 3.06
601 1834 7.973048 AATTACTAGTACTCCCTTCATGTCA 57.027 36.000 0.91 0.00 0.00 3.58
602 1835 7.973048 ATTACTAGTACTCCCTTCATGTCAA 57.027 36.000 0.91 0.00 0.00 3.18
603 1836 7.786046 TTACTAGTACTCCCTTCATGTCAAA 57.214 36.000 0.91 0.00 0.00 2.69
604 1837 6.681729 ACTAGTACTCCCTTCATGTCAAAA 57.318 37.500 0.00 0.00 0.00 2.44
606 1839 7.106239 ACTAGTACTCCCTTCATGTCAAAATG 58.894 38.462 0.00 0.00 0.00 2.32
607 1840 5.880901 AGTACTCCCTTCATGTCAAAATGT 58.119 37.500 0.00 0.00 0.00 2.71
609 1842 7.458397 AGTACTCCCTTCATGTCAAAATGTAA 58.542 34.615 0.00 0.00 0.00 2.41
610 1843 6.824305 ACTCCCTTCATGTCAAAATGTAAG 57.176 37.500 0.00 0.00 0.00 2.34
612 1845 6.431234 ACTCCCTTCATGTCAAAATGTAAGAC 59.569 38.462 0.00 0.00 0.00 3.01
613 1846 6.542821 TCCCTTCATGTCAAAATGTAAGACT 58.457 36.000 0.00 0.00 33.56 3.24
614 1847 7.004086 TCCCTTCATGTCAAAATGTAAGACTT 58.996 34.615 0.00 0.00 33.56 3.01
615 1848 7.505585 TCCCTTCATGTCAAAATGTAAGACTTT 59.494 33.333 0.00 0.00 33.56 2.66
616 1849 8.143835 CCCTTCATGTCAAAATGTAAGACTTTT 58.856 33.333 0.00 0.00 33.56 2.27
617 1850 9.533253 CCTTCATGTCAAAATGTAAGACTTTTT 57.467 29.630 0.00 0.00 36.34 1.94
640 1873 9.847224 TTTTTGGTTTTGTATAGGGCATAAAAA 57.153 25.926 0.00 0.00 0.00 1.94
660 1893 6.490877 AAAAACGTCTTAGATTTTGTTGCG 57.509 33.333 0.00 0.00 0.00 4.85
662 1895 3.395639 ACGTCTTAGATTTTGTTGCGGA 58.604 40.909 0.00 0.00 0.00 5.54
663 1896 3.432252 ACGTCTTAGATTTTGTTGCGGAG 59.568 43.478 0.00 0.00 0.00 4.63
664 1897 3.181520 CGTCTTAGATTTTGTTGCGGAGG 60.182 47.826 0.00 0.00 0.00 4.30
665 1898 3.127030 GTCTTAGATTTTGTTGCGGAGGG 59.873 47.826 0.00 0.00 0.00 4.30
666 1899 3.008594 TCTTAGATTTTGTTGCGGAGGGA 59.991 43.478 0.00 0.00 0.00 4.20
667 1900 1.826385 AGATTTTGTTGCGGAGGGAG 58.174 50.000 0.00 0.00 0.00 4.30
668 1901 1.073923 AGATTTTGTTGCGGAGGGAGT 59.926 47.619 0.00 0.00 0.00 3.85
669 1902 2.304761 AGATTTTGTTGCGGAGGGAGTA 59.695 45.455 0.00 0.00 0.00 2.59
706 2002 6.893958 TTTAGCATTTCTCGATTGACTCTC 57.106 37.500 0.00 0.00 0.00 3.20
708 2004 4.681744 AGCATTTCTCGATTGACTCTCTC 58.318 43.478 0.00 0.00 0.00 3.20
711 2007 6.096141 AGCATTTCTCGATTGACTCTCTCTTA 59.904 38.462 0.00 0.00 0.00 2.10
712 2008 6.754209 GCATTTCTCGATTGACTCTCTCTTAA 59.246 38.462 0.00 0.00 0.00 1.85
713 2009 7.043458 GCATTTCTCGATTGACTCTCTCTTAAG 60.043 40.741 0.00 0.00 0.00 1.85
716 2012 6.181190 TCTCGATTGACTCTCTCTTAAGGAA 58.819 40.000 1.85 0.00 0.00 3.36
717 2013 6.831353 TCTCGATTGACTCTCTCTTAAGGAAT 59.169 38.462 1.85 0.00 0.00 3.01
718 2014 7.340743 TCTCGATTGACTCTCTCTTAAGGAATT 59.659 37.037 1.85 0.00 0.00 2.17
720 2016 7.976734 TCGATTGACTCTCTCTTAAGGAATTTC 59.023 37.037 1.85 0.00 0.00 2.17
766 2816 0.031616 TTTTTGTGGGGAAGGGCAGT 60.032 50.000 0.00 0.00 0.00 4.40
772 2822 0.645496 TGGGGAAGGGCAGTAGGATA 59.355 55.000 0.00 0.00 0.00 2.59
773 2823 1.225694 TGGGGAAGGGCAGTAGGATAT 59.774 52.381 0.00 0.00 0.00 1.63
774 2824 2.349445 GGGGAAGGGCAGTAGGATATT 58.651 52.381 0.00 0.00 0.00 1.28
775 2825 2.040412 GGGGAAGGGCAGTAGGATATTG 59.960 54.545 0.00 0.00 0.00 1.90
918 2989 1.051812 ATCTCGAGCCCATTACCCAG 58.948 55.000 7.81 0.00 0.00 4.45
934 3005 0.580578 CCAGCTGCATCTCGAAATCG 59.419 55.000 8.66 0.00 41.45 3.34
1114 3187 1.705450 CCCCCTCCTCCCCTCTCTA 60.705 68.421 0.00 0.00 0.00 2.43
1115 3188 1.083363 CCCCCTCCTCCCCTCTCTAT 61.083 65.000 0.00 0.00 0.00 1.98
1162 3235 1.261480 AGATCTGTGTCCGTCAAGCT 58.739 50.000 0.00 0.00 0.00 3.74
1209 3282 4.208686 GGCACGGCGGAGTAGGAG 62.209 72.222 13.24 0.00 0.00 3.69
1215 3288 4.208686 GCGGAGTAGGAGTGCCGG 62.209 72.222 0.00 0.00 43.73 6.13
1246 3319 2.574212 CGCGTGCGATTTTGGCTC 60.574 61.111 8.89 0.00 42.83 4.70
1270 3343 1.478105 GGATGGGGTTTTGATCAGTGC 59.522 52.381 0.00 0.00 0.00 4.40
1271 3344 1.133025 GATGGGGTTTTGATCAGTGCG 59.867 52.381 0.00 0.00 0.00 5.34
1300 3373 2.957680 TGAATTTTGCTCAGTTGAGGCA 59.042 40.909 10.88 6.70 42.29 4.75
1310 3383 1.065854 CAGTTGAGGCAGGGTTAGGAG 60.066 57.143 0.00 0.00 0.00 3.69
1323 3403 5.044698 CAGGGTTAGGAGGGTATTGGTTTAA 60.045 44.000 0.00 0.00 0.00 1.52
1344 3424 1.058404 GCGTGGTGTAGACGAGTTTC 58.942 55.000 0.00 0.00 39.21 2.78
1367 3447 4.853924 ACTGAAATGTTCGCTTGGATTT 57.146 36.364 0.00 0.00 0.00 2.17
1380 3460 1.215382 GGATTTGGGCTTTGTCGGC 59.785 57.895 0.00 0.00 0.00 5.54
1413 3493 5.392380 GCTGTTCGAATTGAATCTGATTGGT 60.392 40.000 7.78 0.00 39.21 3.67
1448 3528 5.662674 AGTGTGGTTTATGTCTCCTCTAC 57.337 43.478 0.00 0.00 0.00 2.59
1470 3550 5.615289 ACTGTCAAGTAAGTTCAGAGCATT 58.385 37.500 0.00 0.00 33.79 3.56
1488 3568 6.824305 AGCATTGTAGCTCATTTTGTAAGT 57.176 33.333 0.00 0.00 42.18 2.24
1493 3573 7.759489 TTGTAGCTCATTTTGTAAGTTGGAT 57.241 32.000 0.00 0.00 0.00 3.41
1499 3579 6.588719 TCATTTTGTAAGTTGGATGGGAAG 57.411 37.500 0.00 0.00 0.00 3.46
1502 3582 6.588719 TTTTGTAAGTTGGATGGGAAGATG 57.411 37.500 0.00 0.00 0.00 2.90
1506 3586 6.591935 TGTAAGTTGGATGGGAAGATGATAC 58.408 40.000 0.00 0.00 0.00 2.24
1514 3699 6.268617 TGGATGGGAAGATGATACAGTAGAAG 59.731 42.308 0.00 0.00 0.00 2.85
1517 3702 6.436027 TGGGAAGATGATACAGTAGAAGACT 58.564 40.000 0.00 0.00 39.82 3.24
1682 3875 8.138074 TGTCTGATAGTGATATGAAGCTGTAAC 58.862 37.037 0.00 0.00 0.00 2.50
1760 4037 9.794685 GGTAGTAACTGTATTTAAGTAGACACC 57.205 37.037 0.00 0.00 0.00 4.16
1784 4061 5.508922 CGTTATTTGTAATTGGTGTAACGCC 59.491 40.000 0.00 0.00 37.29 5.68
1789 4066 0.963225 AATTGGTGTAACGCCCAACC 59.037 50.000 0.00 0.00 43.17 3.77
1873 4151 7.871853 TCATTTTTACTTTGTAAGACAGAGGC 58.128 34.615 2.65 0.00 34.91 4.70
1896 4174 3.821033 ACTAATTCCACACAAGGAGCAAC 59.179 43.478 0.00 0.00 39.25 4.17
1922 4200 4.165372 AGGGTTACAAAGAGTGTGGAAGAA 59.835 41.667 0.00 0.00 41.89 2.52
1934 4212 4.706962 AGTGTGGAAGAAGACTTTGCTTTT 59.293 37.500 0.00 0.00 36.39 2.27
1943 4221 8.437360 AAGAAGACTTTGCTTTTATTTTTGGG 57.563 30.769 0.00 0.00 31.71 4.12
1946 4224 7.061566 AGACTTTGCTTTTATTTTTGGGCTA 57.938 32.000 0.00 0.00 0.00 3.93
1948 4226 6.230472 ACTTTGCTTTTATTTTTGGGCTAGG 58.770 36.000 0.00 0.00 0.00 3.02
1949 4227 5.816955 TTGCTTTTATTTTTGGGCTAGGT 57.183 34.783 0.00 0.00 0.00 3.08
2033 4311 4.058124 GCGTCAATCATAGACAAGGCATA 58.942 43.478 0.00 0.00 35.77 3.14
2035 4313 4.148871 CGTCAATCATAGACAAGGCATACG 59.851 45.833 0.00 0.00 35.77 3.06
2049 4327 3.636282 GCATACGCCCGGATAATTTTT 57.364 42.857 0.73 0.00 0.00 1.94
2061 4339 7.067859 GCCCGGATAATTTTTACTCTTAGGTTT 59.932 37.037 0.73 0.00 0.00 3.27
2108 4386 0.454600 ATACGACTACACAGTGGCGG 59.545 55.000 5.31 0.00 34.06 6.13
2114 4392 0.458543 CTACACAGTGGCGGTGCTAG 60.459 60.000 5.31 0.00 39.87 3.42
2135 4413 4.526970 AGTCCTTGTTTGTGATGTCAAGT 58.473 39.130 0.00 0.00 36.53 3.16
2136 4414 4.336433 AGTCCTTGTTTGTGATGTCAAGTG 59.664 41.667 0.00 0.00 36.53 3.16
2160 4438 7.116233 GTGACAACATAAAATTTGGGTTAGCTG 59.884 37.037 0.00 0.00 0.00 4.24
2194 4472 6.370166 GGCTTGTGATTAACTATAGCTGATCC 59.630 42.308 0.00 0.00 32.50 3.36
2217 4495 8.871686 TCCACATATTGCATAAGTATATAGCG 57.128 34.615 0.00 0.00 0.00 4.26
2229 4507 8.854312 CATAAGTATATAGCGTTGACATCACTG 58.146 37.037 0.00 0.00 0.00 3.66
2247 4525 2.787567 GGGTCTGACTCCTAGCGCC 61.788 68.421 2.29 0.00 0.00 6.53
2279 4557 8.967918 TGTGACTACAGTAAGTATGCTTTCTAT 58.032 33.333 0.00 0.00 32.25 1.98
2280 4558 9.804758 GTGACTACAGTAAGTATGCTTTCTATT 57.195 33.333 0.00 0.00 36.22 1.73
2296 4574 7.672983 CTTTCTATTAAAGCACCTTCACAGA 57.327 36.000 0.00 0.00 0.00 3.41
2297 4575 8.099364 CTTTCTATTAAAGCACCTTCACAGAA 57.901 34.615 0.00 0.00 0.00 3.02
2298 4576 8.635765 TTTCTATTAAAGCACCTTCACAGAAT 57.364 30.769 0.00 0.00 0.00 2.40
2299 4577 8.635765 TTCTATTAAAGCACCTTCACAGAATT 57.364 30.769 0.00 0.00 0.00 2.17
2301 4579 8.730680 TCTATTAAAGCACCTTCACAGAATTTC 58.269 33.333 0.00 0.00 0.00 2.17
2302 4580 6.707440 TTAAAGCACCTTCACAGAATTTCA 57.293 33.333 0.00 0.00 0.00 2.69
2303 4581 5.596836 AAAGCACCTTCACAGAATTTCAA 57.403 34.783 0.00 0.00 0.00 2.69
2304 4582 5.596836 AAGCACCTTCACAGAATTTCAAA 57.403 34.783 0.00 0.00 0.00 2.69
2305 4583 5.192327 AGCACCTTCACAGAATTTCAAAG 57.808 39.130 0.00 0.00 0.00 2.77
2307 4585 5.127682 AGCACCTTCACAGAATTTCAAAGTT 59.872 36.000 0.00 0.00 0.00 2.66
2308 4586 5.812127 GCACCTTCACAGAATTTCAAAGTTT 59.188 36.000 0.00 0.00 0.00 2.66
2309 4587 6.237915 GCACCTTCACAGAATTTCAAAGTTTG 60.238 38.462 9.44 9.44 0.00 2.93
2310 4588 5.812127 ACCTTCACAGAATTTCAAAGTTTGC 59.188 36.000 10.90 0.00 0.00 3.68
2311 4589 5.811613 CCTTCACAGAATTTCAAAGTTTGCA 59.188 36.000 10.90 0.00 0.00 4.08
2312 4590 6.480981 CCTTCACAGAATTTCAAAGTTTGCAT 59.519 34.615 10.90 2.80 0.00 3.96
2315 4593 9.545105 TTCACAGAATTTCAAAGTTTGCATTAT 57.455 25.926 10.90 6.26 0.00 1.28
2324 4602 9.973450 TTTCAAAGTTTGCATTATACTAAAGCA 57.027 25.926 10.90 0.00 0.00 3.91
2325 4603 8.964420 TCAAAGTTTGCATTATACTAAAGCAC 57.036 30.769 10.90 0.00 34.56 4.40
2326 4604 8.572185 TCAAAGTTTGCATTATACTAAAGCACA 58.428 29.630 10.90 0.00 34.56 4.57
2327 4605 8.853345 CAAAGTTTGCATTATACTAAAGCACAG 58.147 33.333 1.96 0.00 34.56 3.66
2328 4606 7.687941 AGTTTGCATTATACTAAAGCACAGT 57.312 32.000 0.00 0.00 34.56 3.55
2329 4607 8.110860 AGTTTGCATTATACTAAAGCACAGTT 57.889 30.769 0.00 0.00 34.56 3.16
2330 4608 9.226606 AGTTTGCATTATACTAAAGCACAGTTA 57.773 29.630 0.00 0.00 34.56 2.24
2331 4609 9.274065 GTTTGCATTATACTAAAGCACAGTTAC 57.726 33.333 0.00 0.00 34.56 2.50
2332 4610 8.554835 TTGCATTATACTAAAGCACAGTTACA 57.445 30.769 0.00 0.00 34.56 2.41
2333 4611 8.554835 TGCATTATACTAAAGCACAGTTACAA 57.445 30.769 0.00 0.00 0.00 2.41
2334 4612 9.004717 TGCATTATACTAAAGCACAGTTACAAA 57.995 29.630 0.00 0.00 0.00 2.83
2335 4613 9.490663 GCATTATACTAAAGCACAGTTACAAAG 57.509 33.333 0.00 0.00 0.00 2.77
2336 4614 9.490663 CATTATACTAAAGCACAGTTACAAAGC 57.509 33.333 0.00 0.00 0.00 3.51
2337 4615 8.842358 TTATACTAAAGCACAGTTACAAAGCT 57.158 30.769 0.00 0.00 37.08 3.74
2338 4616 5.674933 ACTAAAGCACAGTTACAAAGCTC 57.325 39.130 0.00 0.00 33.83 4.09
2339 4617 3.990318 AAAGCACAGTTACAAAGCTCC 57.010 42.857 0.00 0.00 33.83 4.70
2340 4618 2.638480 AGCACAGTTACAAAGCTCCA 57.362 45.000 0.00 0.00 0.00 3.86
2341 4619 2.930950 AGCACAGTTACAAAGCTCCAA 58.069 42.857 0.00 0.00 0.00 3.53
2342 4620 3.287222 AGCACAGTTACAAAGCTCCAAA 58.713 40.909 0.00 0.00 0.00 3.28
2343 4621 3.316308 AGCACAGTTACAAAGCTCCAAAG 59.684 43.478 0.00 0.00 0.00 2.77
2353 4631 2.774044 GCTCCAAAGCTGCCTACTC 58.226 57.895 0.00 0.00 45.55 2.59
2354 4632 1.086634 GCTCCAAAGCTGCCTACTCG 61.087 60.000 0.00 0.00 45.55 4.18
2355 4633 0.532573 CTCCAAAGCTGCCTACTCGA 59.467 55.000 0.00 0.00 0.00 4.04
2356 4634 1.137872 CTCCAAAGCTGCCTACTCGAT 59.862 52.381 0.00 0.00 0.00 3.59
2357 4635 1.555075 TCCAAAGCTGCCTACTCGATT 59.445 47.619 0.00 0.00 0.00 3.34
2358 4636 2.764010 TCCAAAGCTGCCTACTCGATTA 59.236 45.455 0.00 0.00 0.00 1.75
2359 4637 3.126831 CCAAAGCTGCCTACTCGATTAG 58.873 50.000 2.91 2.91 0.00 1.73
2360 4638 3.430929 CCAAAGCTGCCTACTCGATTAGT 60.431 47.826 8.77 0.00 42.62 2.24
2364 4642 3.005261 AGCTGCCTACTCGATTAGTCATG 59.995 47.826 8.77 0.00 39.80 3.07
2369 4647 4.559502 GCCTACTCGATTAGTCATGCATGA 60.560 45.833 25.42 25.42 39.80 3.07
2397 4677 2.554344 GCCTGTCCCTGGAATGTTACAA 60.554 50.000 0.00 0.00 0.00 2.41
2418 4698 6.578944 ACAAGTGTGAGTTGTGAGTTATGTA 58.421 36.000 0.00 0.00 40.03 2.29
2425 4705 7.384932 TGTGAGTTGTGAGTTATGTAAGACATG 59.615 37.037 2.33 0.00 39.53 3.21
2466 4746 9.090692 CAAATTCAGTTCAACAAAGTTTCTGAT 57.909 29.630 3.96 0.00 31.99 2.90
2470 4750 5.678483 CAGTTCAACAAAGTTTCTGATCACG 59.322 40.000 0.00 0.00 0.00 4.35
2491 4771 3.745975 CGACCAATCAGAGCACTACAAAA 59.254 43.478 0.00 0.00 0.00 2.44
2537 4817 6.597672 GGTATGACCTTCATATGTGAACAACA 59.402 38.462 0.03 2.56 40.97 3.33
2553 4833 2.290008 ACAACATCCTTCGGCACACATA 60.290 45.455 0.00 0.00 0.00 2.29
2583 4867 4.737352 GCATCAGCAGAAACAACCTTTGAA 60.737 41.667 0.00 0.00 41.58 2.69
2585 4871 5.398603 TCAGCAGAAACAACCTTTGAAAA 57.601 34.783 0.00 0.00 0.00 2.29
2642 4930 8.030692 TCATCCAAGAATCACTTAGCAAATTTG 58.969 33.333 14.03 14.03 37.03 2.32
2787 5082 3.117813 TGATCAATCATCAGCCCATCACA 60.118 43.478 0.00 0.00 36.51 3.58
2849 5144 5.938279 AGCATCTGAAGTATCATCAATGGT 58.062 37.500 0.00 0.00 34.37 3.55
2883 5179 1.327303 ACATCTTTCCCTTTTGCGCA 58.673 45.000 5.66 5.66 0.00 6.09
2970 5267 0.546122 GTGGGTGCCATGGATCTGTA 59.454 55.000 18.40 0.00 35.28 2.74
3016 5345 2.558359 GGAAACCCATGTCTTTCCTGTG 59.442 50.000 18.12 0.00 41.56 3.66
3029 5358 0.546122 TCCTGTGGAAGCAGTGTTGT 59.454 50.000 0.00 0.00 34.84 3.32
3030 5359 0.664761 CCTGTGGAAGCAGTGTTGTG 59.335 55.000 0.00 0.00 34.84 3.33
3034 5363 0.679321 TGGAAGCAGTGTTGTGTGCA 60.679 50.000 0.00 0.00 42.47 4.57
3037 5366 1.033746 AAGCAGTGTTGTGTGCAGCT 61.034 50.000 0.00 0.00 42.47 4.24
3038 5367 1.009222 GCAGTGTTGTGTGCAGCTC 60.009 57.895 0.00 0.00 39.62 4.09
3039 5368 1.650912 CAGTGTTGTGTGCAGCTCC 59.349 57.895 0.00 0.00 0.00 4.70
3040 5369 1.096967 CAGTGTTGTGTGCAGCTCCA 61.097 55.000 0.00 0.00 0.00 3.86
3041 5370 0.816825 AGTGTTGTGTGCAGCTCCAG 60.817 55.000 0.00 0.00 0.00 3.86
3042 5371 1.526686 TGTTGTGTGCAGCTCCAGG 60.527 57.895 0.00 0.00 0.00 4.45
3044 5373 4.648626 TGTGTGCAGCTCCAGGGC 62.649 66.667 0.00 0.00 0.00 5.19
3103 5873 9.445878 CATCAGGTTCTTTATGCATACTATGAT 57.554 33.333 5.74 8.51 0.00 2.45
3133 5903 1.876156 GCTGCTGTATATGGGAAGCAC 59.124 52.381 0.00 0.00 40.59 4.40
3477 6250 6.435292 AGGTGAGTAACTAGTTGTGGATTT 57.565 37.500 18.56 0.00 0.00 2.17
3482 6255 9.269453 GTGAGTAACTAGTTGTGGATTTTTAGT 57.731 33.333 18.56 0.00 0.00 2.24
3566 6339 7.224557 ACTTTTTAGTTGTTTGATCAATGTGCC 59.775 33.333 9.40 0.00 0.00 5.01
3586 6359 2.814336 CCCTTGCCAACTACTTGACTTC 59.186 50.000 0.00 0.00 0.00 3.01
3661 6437 8.094798 TCTAACATTCATGTACCAGTTTTGAC 57.905 34.615 0.00 0.00 40.80 3.18
3790 6661 3.906720 TGTACTGGTTATCTTCCCTGC 57.093 47.619 0.00 0.00 0.00 4.85
3898 6772 9.308000 TCTTGGTTCTTTTTATTACCACATGAT 57.692 29.630 0.00 0.00 40.20 2.45
3900 6774 8.415950 TGGTTCTTTTTATTACCACATGATGT 57.584 30.769 0.00 0.00 35.82 3.06
4001 6892 4.961730 TGGGATTGCTAACCATTGCTATTT 59.038 37.500 0.00 0.00 0.00 1.40
4021 6913 6.667007 ATTTTATAATGGCAGCTTGTTTGC 57.333 33.333 0.00 0.00 40.80 3.68
4042 6934 4.022935 TGCTTAGCAACATTCCTCAAAGTG 60.023 41.667 3.67 0.00 34.76 3.16
4079 6971 3.669949 AGCTTTGATCCCTACCAGGTAT 58.330 45.455 0.00 0.00 31.93 2.73
4086 6978 9.503399 CTTTGATCCCTACCAGGTATATTTTAC 57.497 37.037 0.00 0.00 31.93 2.01
4094 6986 6.431198 ACCAGGTATATTTTACGCACTTTG 57.569 37.500 0.00 0.00 0.00 2.77
4311 7203 4.641989 AGTTGTGCTTGTTCACTTTCTGAT 59.358 37.500 0.00 0.00 37.81 2.90
4314 7206 5.581605 TGTGCTTGTTCACTTTCTGATTTC 58.418 37.500 0.00 0.00 37.81 2.17
4326 7218 8.509690 TCACTTTCTGATTTCATTTAGCTGAAG 58.490 33.333 0.00 0.00 36.55 3.02
4327 7219 8.295288 CACTTTCTGATTTCATTTAGCTGAAGT 58.705 33.333 0.00 0.00 36.55 3.01
4414 7308 5.762179 TCTCCATTCTGTATGTTCACCTT 57.238 39.130 0.00 0.00 31.99 3.50
4418 7312 4.878397 CCATTCTGTATGTTCACCTTCCTC 59.122 45.833 0.00 0.00 31.99 3.71
4421 7315 4.160329 TCTGTATGTTCACCTTCCTCACT 58.840 43.478 0.00 0.00 0.00 3.41
4426 7320 2.367567 TGTTCACCTTCCTCACTACACC 59.632 50.000 0.00 0.00 0.00 4.16
4435 7329 6.940867 ACCTTCCTCACTACACCTTTAAATTC 59.059 38.462 0.00 0.00 0.00 2.17
4437 7331 6.442541 TCCTCACTACACCTTTAAATTCCA 57.557 37.500 0.00 0.00 0.00 3.53
4449 7344 8.204160 CACCTTTAAATTCCAACTTTTCCTTCT 58.796 33.333 0.00 0.00 0.00 2.85
4500 7395 5.891451 ACAGATGCATTTCTGATGTTGATG 58.109 37.500 21.34 0.00 44.88 3.07
4520 7418 2.364970 TGTTTGTAATTGCTGCTTGCCT 59.635 40.909 0.00 0.00 42.00 4.75
4524 7422 4.862902 TGTAATTGCTGCTTGCCTTTTA 57.137 36.364 0.00 0.00 42.00 1.52
4525 7423 4.808558 TGTAATTGCTGCTTGCCTTTTAG 58.191 39.130 0.00 0.00 42.00 1.85
4536 7435 4.023193 GCTTGCCTTTTAGCTGTACTGAAA 60.023 41.667 3.61 0.00 33.25 2.69
4549 7448 5.741982 GCTGTACTGAAATTTGTTTTCGTGT 59.258 36.000 3.61 0.00 45.63 4.49
4704 7603 7.027874 TGTTACTCCAGATAAATTGGGAAGT 57.972 36.000 0.00 0.00 36.34 3.01
4708 7607 7.451731 ACTCCAGATAAATTGGGAAGTGATA 57.548 36.000 0.00 0.00 36.34 2.15
4773 7674 7.345653 TCTTGACTACCATTGATCTATTGGACT 59.654 37.037 13.78 0.00 34.58 3.85
4883 7784 4.718961 CTTGGGAGTACATATTCCAAGGG 58.281 47.826 11.33 0.00 46.29 3.95
4886 7787 3.244596 GGGAGTACATATTCCAAGGGCTC 60.245 52.174 0.00 0.00 34.09 4.70
5016 7918 1.274703 TGATGACCCTCTCCCTTGCC 61.275 60.000 0.00 0.00 0.00 4.52
5234 8140 8.379457 AGAAACTGTTCTTGGTTATGAAGTAC 57.621 34.615 0.00 0.00 41.55 2.73
5235 8141 8.211629 AGAAACTGTTCTTGGTTATGAAGTACT 58.788 33.333 0.00 0.00 41.55 2.73
5237 8143 9.490379 AAACTGTTCTTGGTTATGAAGTACTAG 57.510 33.333 0.00 0.00 0.00 2.57
5238 8144 7.097834 ACTGTTCTTGGTTATGAAGTACTAGC 58.902 38.462 0.00 0.00 0.00 3.42
5240 8146 7.446769 TGTTCTTGGTTATGAAGTACTAGCAA 58.553 34.615 0.00 1.26 0.00 3.91
5241 8147 7.602644 TGTTCTTGGTTATGAAGTACTAGCAAG 59.397 37.037 20.85 20.85 42.55 4.01
5259 8165 8.322091 ACTAGCAAGTAGATGTTGGTAAATCTT 58.678 33.333 0.00 0.00 37.41 2.40
5311 8217 4.022503 GGCTTAATACCTACCTCCTACACG 60.023 50.000 0.00 0.00 0.00 4.49
5314 8220 2.425143 TACCTACCTCCTACACGTGG 57.575 55.000 21.57 1.58 0.00 4.94
5373 8279 9.407380 ACAAACATTTCTGCTGTATTCCATATA 57.593 29.630 0.00 0.00 0.00 0.86
5389 8295 7.859325 TTCCATATAACTTTTGACCTACTGC 57.141 36.000 0.00 0.00 0.00 4.40
5410 8316 5.867330 TGCCATTCTTGTCCAAAATTTCAT 58.133 33.333 0.00 0.00 0.00 2.57
5415 8321 8.928733 CCATTCTTGTCCAAAATTTCATTACAG 58.071 33.333 0.00 0.00 0.00 2.74
5419 8326 7.505585 TCTTGTCCAAAATTTCATTACAGTCCT 59.494 33.333 0.00 0.00 0.00 3.85
5426 8333 9.241317 CAAAATTTCATTACAGTCCTATCATGC 57.759 33.333 0.00 0.00 0.00 4.06
5516 8426 8.423906 TGTCTTAGAACTTTATCTCTCCTTGT 57.576 34.615 0.00 0.00 0.00 3.16
5545 8455 6.293626 CCACTGAAATTTTAGGACACACAGAG 60.294 42.308 13.89 2.52 0.00 3.35
5556 8466 4.649674 AGGACACACAGAGAGTTCAGTTAA 59.350 41.667 0.00 0.00 0.00 2.01
5557 8467 5.305644 AGGACACACAGAGAGTTCAGTTAAT 59.694 40.000 0.00 0.00 0.00 1.40
5558 8468 5.406780 GGACACACAGAGAGTTCAGTTAATG 59.593 44.000 0.00 0.00 0.00 1.90
5559 8469 5.300752 ACACACAGAGAGTTCAGTTAATGG 58.699 41.667 0.00 0.00 0.00 3.16
5560 8470 5.163301 ACACACAGAGAGTTCAGTTAATGGT 60.163 40.000 0.00 0.00 0.00 3.55
5580 8490 4.282703 TGGTATCCGAAGTAAAGCCCTATC 59.717 45.833 0.00 0.00 0.00 2.08
5625 8535 3.029320 TGAAACATCACAAGCCATTGC 57.971 42.857 0.00 0.00 40.27 3.56
5637 8547 4.099266 ACAAGCCATTGCAACTTGAGTAAA 59.901 37.500 26.24 0.00 42.71 2.01
5638 8548 5.221501 ACAAGCCATTGCAACTTGAGTAAAT 60.222 36.000 26.24 7.73 42.71 1.40
5642 8552 8.292444 AGCCATTGCAACTTGAGTAAATATTA 57.708 30.769 0.00 0.00 41.13 0.98
5686 8596 1.702957 TGCCAAGTTTACTAGGGCAGT 59.297 47.619 18.70 0.00 45.59 4.40
5697 8607 7.505923 AGTTTACTAGGGCAGTTTCTTTCAAAT 59.494 33.333 0.00 0.00 38.80 2.32
5701 8611 3.575687 AGGGCAGTTTCTTTCAAATCAGG 59.424 43.478 0.00 0.00 0.00 3.86
5705 8615 4.387862 GCAGTTTCTTTCAAATCAGGCATG 59.612 41.667 0.00 0.00 0.00 4.06
5708 8618 4.445452 TTCTTTCAAATCAGGCATGCTC 57.555 40.909 18.92 7.89 0.00 4.26
5715 8625 2.430248 ATCAGGCATGCTCATGTTGA 57.570 45.000 18.92 11.85 40.80 3.18
5716 8626 1.456296 TCAGGCATGCTCATGTTGAC 58.544 50.000 18.92 0.00 40.80 3.18
5718 8628 1.749063 CAGGCATGCTCATGTTGACAT 59.251 47.619 18.92 0.00 40.80 3.06
5723 8633 5.047164 AGGCATGCTCATGTTGACATTTTTA 60.047 36.000 18.92 0.00 40.80 1.52
5729 8639 6.209192 TGCTCATGTTGACATTTTTAGTGGAT 59.791 34.615 0.00 0.00 33.61 3.41
5731 8641 7.698130 GCTCATGTTGACATTTTTAGTGGATAC 59.302 37.037 0.00 0.00 33.61 2.24
5733 8643 7.389330 TCATGTTGACATTTTTAGTGGATACGT 59.611 33.333 0.00 0.00 34.44 3.57
5795 8705 5.811399 TTTCAGTTGAAACATCGTTCTGT 57.189 34.783 3.28 0.00 38.94 3.41
5803 8713 7.387673 AGTTGAAACATCGTTCTGTATTCATCA 59.612 33.333 0.00 0.00 32.01 3.07
5811 8721 5.353956 TCGTTCTGTATTCATCACCATTTGG 59.646 40.000 0.00 0.00 42.17 3.28
5837 8747 5.107375 CCATTTGTTTATGTGCTGCACTTTC 60.107 40.000 30.43 18.14 35.11 2.62
5839 8749 3.963665 TGTTTATGTGCTGCACTTTCAC 58.036 40.909 30.43 22.26 35.11 3.18
5844 8754 3.286751 GCTGCACTTTCACGGCCA 61.287 61.111 2.24 0.00 31.76 5.36
5845 8755 2.629656 GCTGCACTTTCACGGCCAT 61.630 57.895 2.24 0.00 31.76 4.40
5846 8756 1.210931 CTGCACTTTCACGGCCATG 59.789 57.895 2.24 0.00 0.00 3.66
5847 8757 1.518056 CTGCACTTTCACGGCCATGT 61.518 55.000 2.24 0.00 0.00 3.21
5848 8758 1.106351 TGCACTTTCACGGCCATGTT 61.106 50.000 2.24 0.00 0.00 2.71
5859 8770 6.707440 TCACGGCCATGTTATTCAATTATT 57.293 33.333 2.24 0.00 0.00 1.40
5895 8806 0.798159 TCACGCTGCTAAACATGCTG 59.202 50.000 0.00 0.00 0.00 4.41
5900 8811 2.245096 GCTGCTAAACATGCTGAAACG 58.755 47.619 0.00 0.00 0.00 3.60
5903 8814 4.082274 TGCTAAACATGCTGAAACGATG 57.918 40.909 0.00 0.00 0.00 3.84
5904 8815 2.848302 GCTAAACATGCTGAAACGATGC 59.152 45.455 0.00 0.00 0.00 3.91
5916 8827 4.311606 TGAAACGATGCTGCAGTTACTTA 58.688 39.130 16.64 0.00 0.00 2.24
5962 8873 2.943978 AAGGTGGTCGGCTTCGAGG 61.944 63.158 0.00 0.00 44.17 4.63
6036 8947 3.355378 CCAGAGGCCAATGTAATCAACA 58.645 45.455 5.01 0.00 43.86 3.33
6037 8948 3.379372 CCAGAGGCCAATGTAATCAACAG 59.621 47.826 5.01 0.00 42.70 3.16
6051 8962 2.368439 TCAACAGAACAAAGCACTGCT 58.632 42.857 0.00 0.00 42.56 4.24
6052 8963 3.540617 TCAACAGAACAAAGCACTGCTA 58.459 40.909 3.33 0.00 38.25 3.49
6054 8965 1.876156 ACAGAACAAAGCACTGCTAGC 59.124 47.619 8.10 8.10 38.25 3.42
6067 8978 2.362717 ACTGCTAGCTTTACCGGAGATC 59.637 50.000 17.23 0.00 0.00 2.75
6068 8979 1.337071 TGCTAGCTTTACCGGAGATCG 59.663 52.381 17.23 0.00 38.88 3.69
6130 9041 1.065251 GAATGCTGCTTAGAGCCTTGC 59.935 52.381 0.00 0.89 41.51 4.01
6132 9043 1.377725 GCTGCTTAGAGCCTTGCCA 60.378 57.895 0.00 0.00 41.51 4.92
6143 9054 1.916181 AGCCTTGCCACTACCATAACT 59.084 47.619 0.00 0.00 0.00 2.24
6144 9055 3.112263 AGCCTTGCCACTACCATAACTA 58.888 45.455 0.00 0.00 0.00 2.24
6145 9056 3.716872 AGCCTTGCCACTACCATAACTAT 59.283 43.478 0.00 0.00 0.00 2.12
6147 9058 4.887655 GCCTTGCCACTACCATAACTATTT 59.112 41.667 0.00 0.00 0.00 1.40
6186 9098 7.492352 AGCAGAACGTTTTACTTATTTGTCT 57.508 32.000 0.46 0.00 0.00 3.41
6221 9133 2.487934 ACACATGATCTAATGAGCGCC 58.512 47.619 2.29 0.00 0.00 6.53
6280 9198 3.621715 CGTAGCACCTTTATTCCCTGTTC 59.378 47.826 0.00 0.00 0.00 3.18
6342 9260 1.699083 TCTGAAGCCAGGACATTCACA 59.301 47.619 0.00 0.00 40.76 3.58
6343 9261 2.082231 CTGAAGCCAGGACATTCACAG 58.918 52.381 0.00 0.00 36.77 3.66
6362 9289 7.591006 TCACAGATTTACGAGAAAATACACC 57.409 36.000 0.00 0.00 0.00 4.16
6372 9299 4.432503 CGAGAAAATACACCGTCGTTTCAG 60.433 45.833 6.54 0.00 31.94 3.02
6373 9300 3.744426 AGAAAATACACCGTCGTTTCAGG 59.256 43.478 6.54 0.00 31.94 3.86
6374 9301 3.389925 AAATACACCGTCGTTTCAGGA 57.610 42.857 0.00 0.00 0.00 3.86
6388 9349 4.692625 CGTTTCAGGAAGATGTCAGACAAT 59.307 41.667 7.50 0.00 0.00 2.71
6424 9385 6.000219 ACTTCTGAATGTTGTGCTATCAGTT 59.000 36.000 0.00 0.00 38.83 3.16
6497 9502 4.796110 ACTAAGGTCAACATGGGCATAT 57.204 40.909 0.00 0.00 0.00 1.78
6500 9505 3.959495 AGGTCAACATGGGCATATTCT 57.041 42.857 0.00 0.00 0.00 2.40
6502 9507 3.956199 AGGTCAACATGGGCATATTCTTG 59.044 43.478 0.00 0.00 0.00 3.02
6503 9508 3.701040 GGTCAACATGGGCATATTCTTGT 59.299 43.478 0.00 0.00 0.00 3.16
6504 9509 4.440525 GGTCAACATGGGCATATTCTTGTG 60.441 45.833 0.00 0.00 0.00 3.33
6507 9512 5.657745 TCAACATGGGCATATTCTTGTGAAT 59.342 36.000 0.00 0.00 44.32 2.57
6508 9513 5.779529 ACATGGGCATATTCTTGTGAATC 57.220 39.130 0.00 0.00 41.55 2.52
6509 9514 4.276678 ACATGGGCATATTCTTGTGAATCG 59.723 41.667 0.00 0.00 41.55 3.34
6511 9516 4.522114 TGGGCATATTCTTGTGAATCGAA 58.478 39.130 0.00 0.00 41.55 3.71
6512 9517 5.132502 TGGGCATATTCTTGTGAATCGAAT 58.867 37.500 0.00 0.00 41.55 3.34
6513 9518 5.008911 TGGGCATATTCTTGTGAATCGAATG 59.991 40.000 0.00 0.00 41.55 2.67
6527 9592 4.669809 AATGCCCCGCGGGTGAAA 62.670 61.111 40.52 23.75 46.51 2.69
6531 9596 2.045340 CCCCGCGGGTGAAAATCT 60.045 61.111 40.52 0.00 38.25 2.40
6537 9602 2.073816 CGCGGGTGAAAATCTTGTAGT 58.926 47.619 0.00 0.00 0.00 2.73
6538 9603 2.482721 CGCGGGTGAAAATCTTGTAGTT 59.517 45.455 0.00 0.00 0.00 2.24
6547 9612 9.010029 GGTGAAAATCTTGTAGTTATTCTCCAA 57.990 33.333 0.00 0.00 32.24 3.53
6551 9616 6.567602 ATCTTGTAGTTATTCTCCAAGCCT 57.432 37.500 0.00 0.00 39.12 4.58
6552 9617 5.734720 TCTTGTAGTTATTCTCCAAGCCTG 58.265 41.667 0.00 0.00 39.12 4.85
6559 9635 3.910568 ATTCTCCAAGCCTGAAGAGAG 57.089 47.619 0.00 0.00 36.76 3.20
6572 9648 5.360591 CCTGAAGAGAGTACACTGTTGTTT 58.639 41.667 7.42 0.00 37.15 2.83
6574 9650 5.972935 TGAAGAGAGTACACTGTTGTTTCA 58.027 37.500 7.42 0.00 37.15 2.69
6575 9651 6.042777 TGAAGAGAGTACACTGTTGTTTCAG 58.957 40.000 7.42 0.00 40.80 3.02
6581 9657 7.275920 AGAGTACACTGTTGTTTCAGATTTCT 58.724 34.615 0.00 0.00 38.63 2.52
6582 9658 7.439655 AGAGTACACTGTTGTTTCAGATTTCTC 59.560 37.037 0.00 0.00 38.63 2.87
6588 9664 7.012327 CACTGTTGTTTCAGATTTCTCACCTTA 59.988 37.037 0.65 0.00 38.63 2.69
6592 9668 8.496751 GTTGTTTCAGATTTCTCACCTTACTAC 58.503 37.037 0.00 0.00 0.00 2.73
6599 9675 8.478877 CAGATTTCTCACCTTACTACCAAGTAT 58.521 37.037 0.00 0.00 38.02 2.12
6600 9676 8.478877 AGATTTCTCACCTTACTACCAAGTATG 58.521 37.037 0.00 0.00 38.02 2.39
6601 9677 7.549147 TTTCTCACCTTACTACCAAGTATGT 57.451 36.000 0.00 0.00 38.02 2.29
6602 9678 8.654485 TTTCTCACCTTACTACCAAGTATGTA 57.346 34.615 0.00 0.00 38.02 2.29
6603 9679 8.834004 TTCTCACCTTACTACCAAGTATGTAT 57.166 34.615 0.00 0.00 38.02 2.29
6604 9680 8.234136 TCTCACCTTACTACCAAGTATGTATG 57.766 38.462 0.00 0.00 38.02 2.39
6605 9681 8.057011 TCTCACCTTACTACCAAGTATGTATGA 58.943 37.037 0.00 0.00 38.02 2.15
6617 9777 6.406370 CAAGTATGTATGACTTTGGGTCTGA 58.594 40.000 0.00 0.00 44.74 3.27
6621 9781 5.304686 TGTATGACTTTGGGTCTGAAAGT 57.695 39.130 0.00 0.00 44.51 2.66
6634 9794 5.048713 GGGTCTGAAAGTTGTTAGACAATGG 60.049 44.000 13.28 0.00 40.59 3.16
6639 9799 4.568152 AAGTTGTTAGACAATGGTGCAC 57.432 40.909 8.80 8.80 40.59 4.57
6646 9806 2.991250 AGACAATGGTGCACTATGACC 58.009 47.619 17.16 8.43 0.00 4.02
6648 9808 3.774766 AGACAATGGTGCACTATGACCTA 59.225 43.478 17.16 0.00 32.98 3.08
6679 9890 4.950205 TCCCTTTCGAAGTGTACTCTTT 57.050 40.909 11.27 0.00 0.00 2.52
6705 9916 1.261619 GAAGAATCATACAAGCGGCGG 59.738 52.381 9.78 0.00 0.00 6.13
6853 10067 3.608662 GCCAGCCAAACAGCAGCA 61.609 61.111 0.00 0.00 35.18 4.41
6854 10068 2.649034 CCAGCCAAACAGCAGCAG 59.351 61.111 0.00 0.00 34.23 4.24
6933 10149 1.377463 CACTCCTCCGACTCCTCGT 60.377 63.158 0.00 0.00 38.32 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 1.927895 ATGACTTTCGACCGAGCATC 58.072 50.000 0.00 0.00 0.00 3.91
42 43 7.874016 TGCTTCTTTAAGAGACGGTTACATAAA 59.126 33.333 0.00 0.00 34.37 1.40
52 53 6.629252 GTCTTGTTTTGCTTCTTTAAGAGACG 59.371 38.462 0.00 0.00 34.37 4.18
57 58 7.810766 TGTTGTCTTGTTTTGCTTCTTTAAG 57.189 32.000 0.00 0.00 35.68 1.85
90 91 0.533491 CTCCACAATGCCACAATGGG 59.467 55.000 0.00 0.00 38.19 4.00
91 92 0.533491 CCTCCACAATGCCACAATGG 59.467 55.000 0.00 0.00 41.55 3.16
92 93 1.548081 TCCTCCACAATGCCACAATG 58.452 50.000 0.00 0.00 0.00 2.82
93 94 2.173519 CTTCCTCCACAATGCCACAAT 58.826 47.619 0.00 0.00 0.00 2.71
94 95 1.133513 ACTTCCTCCACAATGCCACAA 60.134 47.619 0.00 0.00 0.00 3.33
95 96 0.478072 ACTTCCTCCACAATGCCACA 59.522 50.000 0.00 0.00 0.00 4.17
96 97 2.489938 TACTTCCTCCACAATGCCAC 57.510 50.000 0.00 0.00 0.00 5.01
97 98 2.575735 TGATACTTCCTCCACAATGCCA 59.424 45.455 0.00 0.00 0.00 4.92
98 99 2.945668 GTGATACTTCCTCCACAATGCC 59.054 50.000 0.00 0.00 0.00 4.40
99 100 3.609853 TGTGATACTTCCTCCACAATGC 58.390 45.455 0.00 0.00 36.69 3.56
158 159 6.122277 AGATTTTCATATCCAACGACCACAT 58.878 36.000 0.00 0.00 0.00 3.21
159 160 5.496556 AGATTTTCATATCCAACGACCACA 58.503 37.500 0.00 0.00 0.00 4.17
188 190 0.667993 ATGTGTTTGTGGGTGAAGCG 59.332 50.000 0.00 0.00 0.00 4.68
200 202 5.384063 TGTGAAATATGCGGAATGTGTTT 57.616 34.783 0.00 0.00 0.00 2.83
259 366 1.697284 TTGCATACAAGCACCCACAA 58.303 45.000 0.00 0.00 45.61 3.33
282 389 5.220662 CGTGGGTAGCTTATTGAATCTTGTG 60.221 44.000 0.00 0.00 0.00 3.33
283 390 4.876107 CGTGGGTAGCTTATTGAATCTTGT 59.124 41.667 0.00 0.00 0.00 3.16
288 396 7.107542 TCTAAAACGTGGGTAGCTTATTGAAT 58.892 34.615 0.00 0.00 0.00 2.57
301 409 2.614057 GCCATCAGATCTAAAACGTGGG 59.386 50.000 0.00 0.00 0.00 4.61
318 426 1.545582 CGAAACCCAAACATGAGCCAT 59.454 47.619 0.00 0.00 0.00 4.40
319 427 0.958091 CGAAACCCAAACATGAGCCA 59.042 50.000 0.00 0.00 0.00 4.75
338 446 4.007659 ACCAATAACTCGGTGGAAACATC 58.992 43.478 0.00 0.00 46.14 3.06
349 457 1.735571 CCCGTGGAAACCAATAACTCG 59.264 52.381 0.00 0.00 34.18 4.18
356 464 3.073356 AGAAACTATCCCGTGGAAACCAA 59.927 43.478 0.00 0.00 34.18 3.67
373 481 6.564328 AGAAGAAACACAATGGACAAGAAAC 58.436 36.000 0.00 0.00 0.00 2.78
407 528 1.270826 GCTCACTCGCATATGCTAGGA 59.729 52.381 27.28 20.54 38.06 2.94
423 544 1.742831 AGAAAACTTGCGTGTTGCTCA 59.257 42.857 0.00 0.00 46.63 4.26
432 553 6.421202 ACTCTCTAAAGTACAGAAAACTTGCG 59.579 38.462 0.00 0.00 37.26 4.85
441 562 6.546403 AGACAACACACTCTCTAAAGTACAGA 59.454 38.462 0.00 0.00 0.00 3.41
442 563 6.740110 AGACAACACACTCTCTAAAGTACAG 58.260 40.000 0.00 0.00 0.00 2.74
451 572 8.589338 ACATATTAAAGAGACAACACACTCTCT 58.411 33.333 0.00 0.00 44.30 3.10
454 575 8.764524 AGACATATTAAAGAGACAACACACTC 57.235 34.615 0.00 0.00 0.00 3.51
574 1807 9.134055 GACATGAAGGGAGTACTAGTAATTACT 57.866 37.037 21.35 21.35 40.24 2.24
575 1808 8.910944 TGACATGAAGGGAGTACTAGTAATTAC 58.089 37.037 3.61 7.57 0.00 1.89
576 1809 9.483489 TTGACATGAAGGGAGTACTAGTAATTA 57.517 33.333 3.61 0.00 0.00 1.40
577 1810 7.973048 TGACATGAAGGGAGTACTAGTAATT 57.027 36.000 3.61 0.00 0.00 1.40
578 1811 7.973048 TTGACATGAAGGGAGTACTAGTAAT 57.027 36.000 3.61 2.68 0.00 1.89
579 1812 7.786046 TTTGACATGAAGGGAGTACTAGTAA 57.214 36.000 3.61 0.00 0.00 2.24
581 1814 6.681729 TTTTGACATGAAGGGAGTACTAGT 57.318 37.500 0.00 0.00 0.00 2.57
582 1815 7.106239 ACATTTTGACATGAAGGGAGTACTAG 58.894 38.462 0.00 0.00 0.00 2.57
583 1816 7.016153 ACATTTTGACATGAAGGGAGTACTA 57.984 36.000 0.00 0.00 0.00 1.82
584 1817 5.880901 ACATTTTGACATGAAGGGAGTACT 58.119 37.500 0.00 0.00 0.00 2.73
585 1818 7.606456 TCTTACATTTTGACATGAAGGGAGTAC 59.394 37.037 0.00 0.00 0.00 2.73
586 1819 7.606456 GTCTTACATTTTGACATGAAGGGAGTA 59.394 37.037 0.00 0.00 0.00 2.59
588 1821 6.656693 AGTCTTACATTTTGACATGAAGGGAG 59.343 38.462 0.00 0.00 33.56 4.30
589 1822 6.542821 AGTCTTACATTTTGACATGAAGGGA 58.457 36.000 0.00 0.00 33.56 4.20
590 1823 6.824305 AGTCTTACATTTTGACATGAAGGG 57.176 37.500 0.00 0.00 33.56 3.95
591 1824 9.533253 AAAAAGTCTTACATTTTGACATGAAGG 57.467 29.630 0.00 0.00 29.22 3.46
614 1847 9.847224 TTTTTATGCCCTATACAAAACCAAAAA 57.153 25.926 0.00 0.00 0.00 1.94
637 1870 5.457473 CCGCAACAAAATCTAAGACGTTTTT 59.543 36.000 0.00 0.00 0.00 1.94
638 1871 4.973663 CCGCAACAAAATCTAAGACGTTTT 59.026 37.500 0.00 0.00 0.00 2.43
639 1872 4.273969 TCCGCAACAAAATCTAAGACGTTT 59.726 37.500 0.00 0.00 0.00 3.60
640 1873 3.810941 TCCGCAACAAAATCTAAGACGTT 59.189 39.130 0.00 0.00 0.00 3.99
641 1874 3.395639 TCCGCAACAAAATCTAAGACGT 58.604 40.909 0.00 0.00 0.00 4.34
642 1875 3.181520 CCTCCGCAACAAAATCTAAGACG 60.182 47.826 0.00 0.00 0.00 4.18
643 1876 3.127030 CCCTCCGCAACAAAATCTAAGAC 59.873 47.826 0.00 0.00 0.00 3.01
644 1877 3.008594 TCCCTCCGCAACAAAATCTAAGA 59.991 43.478 0.00 0.00 0.00 2.10
645 1878 3.343617 TCCCTCCGCAACAAAATCTAAG 58.656 45.455 0.00 0.00 0.00 2.18
647 1880 2.304761 ACTCCCTCCGCAACAAAATCTA 59.695 45.455 0.00 0.00 0.00 1.98
651 1884 2.871096 ATACTCCCTCCGCAACAAAA 57.129 45.000 0.00 0.00 0.00 2.44
652 1885 2.871096 AATACTCCCTCCGCAACAAA 57.129 45.000 0.00 0.00 0.00 2.83
653 1886 2.871096 AAATACTCCCTCCGCAACAA 57.129 45.000 0.00 0.00 0.00 2.83
654 1887 2.871096 AAAATACTCCCTCCGCAACA 57.129 45.000 0.00 0.00 0.00 3.33
698 1994 9.930693 GTTAGAAATTCCTTAAGAGAGAGTCAA 57.069 33.333 3.36 0.00 0.00 3.18
750 2800 1.497309 CCTACTGCCCTTCCCCACAA 61.497 60.000 0.00 0.00 0.00 3.33
799 2870 2.243221 AGATGGGCCTAAATGAAGTGCT 59.757 45.455 4.53 0.00 0.00 4.40
1088 3159 2.015726 GGAGGAGGGGGAGAGAGGA 61.016 68.421 0.00 0.00 0.00 3.71
1162 3235 0.550914 AACCAAGCAAGGACCAGACA 59.449 50.000 1.01 0.00 0.00 3.41
1215 3288 1.885850 ACGCGGAACCAACAGTGTC 60.886 57.895 12.47 0.00 0.00 3.67
1224 3297 1.795962 CAAAATCGCACGCGGAACC 60.796 57.895 12.47 0.00 40.25 3.62
1246 3319 1.014352 GATCAAAACCCCATCCGACG 58.986 55.000 0.00 0.00 0.00 5.12
1270 3343 3.963665 TGAGCAAAATTCACTGAAACCG 58.036 40.909 0.00 0.00 0.00 4.44
1271 3344 4.936891 ACTGAGCAAAATTCACTGAAACC 58.063 39.130 0.00 0.00 0.00 3.27
1300 3373 2.984989 ACCAATACCCTCCTAACCCT 57.015 50.000 0.00 0.00 0.00 4.34
1310 3383 2.756207 ACCACGCATTAAACCAATACCC 59.244 45.455 0.00 0.00 0.00 3.69
1323 3403 0.601558 AACTCGTCTACACCACGCAT 59.398 50.000 0.00 0.00 37.18 4.73
1344 3424 5.551760 AATCCAAGCGAACATTTCAGTAG 57.448 39.130 0.00 0.00 0.00 2.57
1367 3447 0.539438 AATTCAGCCGACAAAGCCCA 60.539 50.000 0.00 0.00 0.00 5.36
1380 3460 4.786507 TCAATTCGAACAGCACAATTCAG 58.213 39.130 0.00 0.00 0.00 3.02
1425 3505 6.377429 CAGTAGAGGAGACATAAACCACACTA 59.623 42.308 0.00 0.00 0.00 2.74
1448 3528 5.468072 ACAATGCTCTGAACTTACTTGACAG 59.532 40.000 0.00 0.00 0.00 3.51
1470 3550 6.150976 CCATCCAACTTACAAAATGAGCTACA 59.849 38.462 0.00 0.00 0.00 2.74
1488 3568 6.143206 TCTACTGTATCATCTTCCCATCCAA 58.857 40.000 0.00 0.00 0.00 3.53
1493 3573 6.436027 AGTCTTCTACTGTATCATCTTCCCA 58.564 40.000 0.00 0.00 36.93 4.37
1499 3579 5.982516 CAGGCAAGTCTTCTACTGTATCATC 59.017 44.000 0.00 0.00 38.88 2.92
1502 3582 5.105752 CACAGGCAAGTCTTCTACTGTATC 58.894 45.833 11.10 0.00 38.88 2.24
1506 3586 3.062763 CACACAGGCAAGTCTTCTACTG 58.937 50.000 6.28 6.28 38.88 2.74
1514 3699 0.308993 GCAACTCACACAGGCAAGTC 59.691 55.000 0.00 0.00 0.00 3.01
1517 3702 1.713937 CGTGCAACTCACACAGGCAA 61.714 55.000 0.00 0.00 45.92 4.52
1615 3800 8.662781 TTTACTCAGCACATGGATAGAATTAC 57.337 34.615 0.00 0.00 0.00 1.89
1653 3846 7.871973 ACAGCTTCATATCACTATCAGACAATC 59.128 37.037 0.00 0.00 0.00 2.67
1682 3875 1.662629 CTTCACCGCAGCTAGAATGTG 59.337 52.381 0.00 0.00 0.00 3.21
1760 4037 5.508922 GGCGTTACACCAATTACAAATAACG 59.491 40.000 8.77 8.77 43.70 3.18
1784 4061 8.682936 AATCTGATTAGCTTAGTATTGGTTGG 57.317 34.615 0.00 0.00 0.00 3.77
1851 4129 6.826741 AGTGCCTCTGTCTTACAAAGTAAAAA 59.173 34.615 0.00 0.00 0.00 1.94
1870 4148 2.375174 TCCTTGTGTGGAATTAGTGCCT 59.625 45.455 0.00 0.00 32.39 4.75
1873 4151 3.411446 TGCTCCTTGTGTGGAATTAGTG 58.589 45.455 0.00 0.00 35.43 2.74
1896 4174 2.884639 CCACACTCTTTGTAACCCTTGG 59.115 50.000 0.00 0.00 35.67 3.61
1922 4200 5.928976 AGCCCAAAAATAAAAGCAAAGTCT 58.071 33.333 0.00 0.00 0.00 3.24
1934 4212 5.397559 GCCTTCTAGACCTAGCCCAAAAATA 60.398 44.000 0.00 0.00 33.32 1.40
1943 4221 3.449377 AGAAAGTGCCTTCTAGACCTAGC 59.551 47.826 0.00 0.00 33.81 3.42
1946 4224 2.835156 GGAGAAAGTGCCTTCTAGACCT 59.165 50.000 0.00 0.00 35.76 3.85
1948 4226 4.545208 AAGGAGAAAGTGCCTTCTAGAC 57.455 45.455 0.00 0.00 40.37 2.59
1949 4227 4.593206 TGAAAGGAGAAAGTGCCTTCTAGA 59.407 41.667 0.00 0.00 43.46 2.43
1993 4271 4.096532 TGACGCAACTAAACAACATTTCCA 59.903 37.500 0.00 0.00 0.00 3.53
1995 4273 6.416455 TGATTGACGCAACTAAACAACATTTC 59.584 34.615 0.00 0.00 0.00 2.17
1998 4276 5.431420 TGATTGACGCAACTAAACAACAT 57.569 34.783 0.00 0.00 0.00 2.71
2033 4311 4.146745 AGAGTAAAAATTATCCGGGCGT 57.853 40.909 0.00 0.00 0.00 5.68
2035 4313 6.060136 ACCTAAGAGTAAAAATTATCCGGGC 58.940 40.000 0.00 0.00 0.00 6.13
2048 4326 8.833493 GCTAACAAGAAACAAACCTAAGAGTAA 58.167 33.333 0.00 0.00 0.00 2.24
2049 4327 7.988599 TGCTAACAAGAAACAAACCTAAGAGTA 59.011 33.333 0.00 0.00 0.00 2.59
2061 4339 7.575414 TTTGGAGTATTGCTAACAAGAAACA 57.425 32.000 0.00 0.00 39.69 2.83
2073 4351 7.650504 TGTAGTCGTATACATTTGGAGTATTGC 59.349 37.037 3.32 0.00 34.28 3.56
2108 4386 3.815401 ACATCACAAACAAGGACTAGCAC 59.185 43.478 0.00 0.00 0.00 4.40
2114 4392 4.335315 TCACTTGACATCACAAACAAGGAC 59.665 41.667 0.00 0.00 42.39 3.85
2135 4413 7.151308 CAGCTAACCCAAATTTTATGTTGTCA 58.849 34.615 0.00 0.00 0.00 3.58
2136 4414 6.090763 GCAGCTAACCCAAATTTTATGTTGTC 59.909 38.462 0.00 1.06 0.00 3.18
2160 4438 6.927294 AGTTAATCACAAGCCTATTAGTGC 57.073 37.500 0.00 0.00 32.25 4.40
2194 4472 9.906111 CAACGCTATATACTTATGCAATATGTG 57.094 33.333 0.00 0.00 37.68 3.21
2217 4495 2.037772 AGTCAGACCCAGTGATGTCAAC 59.962 50.000 13.18 10.75 33.89 3.18
2229 4507 2.787567 GGCGCTAGGAGTCAGACCC 61.788 68.421 7.64 0.00 0.00 4.46
2272 4550 7.672983 TCTGTGAAGGTGCTTTAATAGAAAG 57.327 36.000 0.00 0.00 0.00 2.62
2273 4551 8.635765 ATTCTGTGAAGGTGCTTTAATAGAAA 57.364 30.769 0.00 0.00 29.34 2.52
2275 4553 8.635765 AAATTCTGTGAAGGTGCTTTAATAGA 57.364 30.769 0.00 0.00 0.00 1.98
2279 4557 6.707440 TGAAATTCTGTGAAGGTGCTTTAA 57.293 33.333 0.00 0.00 0.00 1.52
2280 4558 6.707440 TTGAAATTCTGTGAAGGTGCTTTA 57.293 33.333 0.00 0.00 0.00 1.85
2281 4559 5.596836 TTGAAATTCTGTGAAGGTGCTTT 57.403 34.783 0.00 0.00 0.00 3.51
2282 4560 5.127682 ACTTTGAAATTCTGTGAAGGTGCTT 59.872 36.000 0.00 0.00 0.00 3.91
2283 4561 4.646492 ACTTTGAAATTCTGTGAAGGTGCT 59.354 37.500 0.00 0.00 0.00 4.40
2286 4564 5.812127 GCAAACTTTGAAATTCTGTGAAGGT 59.188 36.000 5.65 0.00 0.00 3.50
2287 4565 5.811613 TGCAAACTTTGAAATTCTGTGAAGG 59.188 36.000 5.65 0.00 0.00 3.46
2298 4576 9.973450 TGCTTTAGTATAATGCAAACTTTGAAA 57.027 25.926 5.65 0.00 0.00 2.69
2299 4577 9.405587 GTGCTTTAGTATAATGCAAACTTTGAA 57.594 29.630 5.65 0.00 35.34 2.69
2301 4579 8.741101 TGTGCTTTAGTATAATGCAAACTTTG 57.259 30.769 10.53 0.00 35.34 2.77
2302 4580 8.576442 ACTGTGCTTTAGTATAATGCAAACTTT 58.424 29.630 10.53 0.00 35.34 2.66
2303 4581 8.110860 ACTGTGCTTTAGTATAATGCAAACTT 57.889 30.769 10.53 0.00 35.34 2.66
2304 4582 7.687941 ACTGTGCTTTAGTATAATGCAAACT 57.312 32.000 10.53 0.00 35.34 2.66
2305 4583 9.274065 GTAACTGTGCTTTAGTATAATGCAAAC 57.726 33.333 10.53 2.79 35.34 2.93
2307 4585 8.554835 TGTAACTGTGCTTTAGTATAATGCAA 57.445 30.769 10.53 3.42 35.34 4.08
2308 4586 8.554835 TTGTAACTGTGCTTTAGTATAATGCA 57.445 30.769 6.13 6.13 0.00 3.96
2309 4587 9.490663 CTTTGTAACTGTGCTTTAGTATAATGC 57.509 33.333 1.61 1.61 0.00 3.56
2310 4588 9.490663 GCTTTGTAACTGTGCTTTAGTATAATG 57.509 33.333 0.00 0.00 0.00 1.90
2311 4589 9.449719 AGCTTTGTAACTGTGCTTTAGTATAAT 57.550 29.630 0.00 0.00 0.00 1.28
2312 4590 8.842358 AGCTTTGTAACTGTGCTTTAGTATAA 57.158 30.769 0.00 0.00 0.00 0.98
2315 4593 5.699458 GGAGCTTTGTAACTGTGCTTTAGTA 59.301 40.000 0.00 0.00 33.83 1.82
2317 4595 4.515191 TGGAGCTTTGTAACTGTGCTTTAG 59.485 41.667 0.00 0.00 33.83 1.85
2318 4596 4.456535 TGGAGCTTTGTAACTGTGCTTTA 58.543 39.130 0.00 0.00 33.83 1.85
2319 4597 3.287222 TGGAGCTTTGTAACTGTGCTTT 58.713 40.909 0.00 0.00 33.83 3.51
2320 4598 2.930950 TGGAGCTTTGTAACTGTGCTT 58.069 42.857 0.00 0.00 33.83 3.91
2321 4599 2.638480 TGGAGCTTTGTAACTGTGCT 57.362 45.000 0.00 0.00 36.63 4.40
2322 4600 3.632189 CTTTGGAGCTTTGTAACTGTGC 58.368 45.455 0.00 0.00 0.00 4.57
2323 4601 3.632189 GCTTTGGAGCTTTGTAACTGTG 58.368 45.455 0.00 0.00 45.65 3.66
2324 4602 3.990318 GCTTTGGAGCTTTGTAACTGT 57.010 42.857 0.00 0.00 45.65 3.55
2336 4614 0.532573 TCGAGTAGGCAGCTTTGGAG 59.467 55.000 0.00 0.00 0.00 3.86
2337 4615 1.195115 ATCGAGTAGGCAGCTTTGGA 58.805 50.000 0.00 0.00 0.00 3.53
2338 4616 2.029838 AATCGAGTAGGCAGCTTTGG 57.970 50.000 0.00 0.00 0.00 3.28
2339 4617 3.786635 ACTAATCGAGTAGGCAGCTTTG 58.213 45.455 22.57 0.00 36.27 2.77
2340 4618 3.447586 TGACTAATCGAGTAGGCAGCTTT 59.552 43.478 23.83 0.29 39.06 3.51
2341 4619 3.024547 TGACTAATCGAGTAGGCAGCTT 58.975 45.455 23.83 1.06 39.06 3.74
2342 4620 2.656002 TGACTAATCGAGTAGGCAGCT 58.344 47.619 23.83 1.83 39.06 4.24
2343 4621 3.312828 CATGACTAATCGAGTAGGCAGC 58.687 50.000 29.82 13.95 42.44 5.25
2344 4622 3.243535 TGCATGACTAATCGAGTAGGCAG 60.244 47.826 29.82 22.21 42.44 4.85
2345 4623 2.693074 TGCATGACTAATCGAGTAGGCA 59.307 45.455 28.81 28.81 43.32 4.75
2346 4624 3.371102 TGCATGACTAATCGAGTAGGC 57.629 47.619 22.57 20.76 39.06 3.93
2347 4625 5.126396 TCATGCATGACTAATCGAGTAGG 57.874 43.478 25.42 7.12 39.06 3.18
2360 4638 3.623703 ACAGGCTAATTGTCATGCATGA 58.376 40.909 25.42 25.42 39.19 3.07
2364 4642 1.678101 GGGACAGGCTAATTGTCATGC 59.322 52.381 6.89 0.00 45.23 4.06
2369 4647 1.668826 TCCAGGGACAGGCTAATTGT 58.331 50.000 0.00 0.00 33.77 2.71
2379 4657 3.137544 ACACTTGTAACATTCCAGGGACA 59.862 43.478 0.00 0.00 0.00 4.02
2397 4677 6.924060 GTCTTACATAACTCACAACTCACACT 59.076 38.462 0.00 0.00 0.00 3.55
2418 4698 2.026822 CCCAGGACTTGTAGCATGTCTT 60.027 50.000 12.62 5.02 38.21 3.01
2425 4705 1.839424 ATTTGCCCAGGACTTGTAGC 58.161 50.000 0.00 0.00 0.00 3.58
2466 4746 0.969149 AGTGCTCTGATTGGTCGTGA 59.031 50.000 0.00 0.00 0.00 4.35
2470 4750 5.689383 TTTTTGTAGTGCTCTGATTGGTC 57.311 39.130 0.00 0.00 0.00 4.02
2553 4833 4.924305 TGTTTCTGCTGATGCTTTTTCT 57.076 36.364 0.00 0.00 40.48 2.52
2583 4867 7.499232 GGTGGCAAGATGTGTAGTAGATATTTT 59.501 37.037 0.00 0.00 0.00 1.82
2585 4871 6.327626 AGGTGGCAAGATGTGTAGTAGATATT 59.672 38.462 0.00 0.00 0.00 1.28
2679 4967 1.729586 AAACTACCTGCTGGAGTCCA 58.270 50.000 17.64 12.40 37.04 4.02
2754 5042 7.108194 GCTGATGATTGATCATGGACCTATAA 58.892 38.462 11.00 0.00 46.84 0.98
2755 5043 6.352479 GGCTGATGATTGATCATGGACCTATA 60.352 42.308 11.00 0.00 46.84 1.31
2787 5082 3.644265 TGGTGTAGATAATATGGGTGCGT 59.356 43.478 0.00 0.00 0.00 5.24
2849 5144 5.822519 GGAAAGATGTTGATGGTGTATGCTA 59.177 40.000 0.00 0.00 0.00 3.49
2865 5160 1.000385 TGTGCGCAAAAGGGAAAGATG 60.000 47.619 14.00 0.00 0.00 2.90
2883 5179 1.039856 ACGGGCAAAAAGAGCAATGT 58.960 45.000 0.00 0.00 0.00 2.71
2970 5267 0.256752 TGCTGAATGCCACTGCCTAT 59.743 50.000 0.00 0.00 42.00 2.57
3016 5345 0.029834 CTGCACACAACACTGCTTCC 59.970 55.000 0.00 0.00 34.29 3.46
3029 5358 3.654143 ATGCCCTGGAGCTGCACA 61.654 61.111 2.72 0.86 37.92 4.57
3030 5359 3.138798 CATGCCCTGGAGCTGCAC 61.139 66.667 2.72 0.00 37.92 4.57
3039 5368 2.044555 CAGCTGACACCATGCCCTG 61.045 63.158 8.42 0.00 0.00 4.45
3040 5369 2.353958 CAGCTGACACCATGCCCT 59.646 61.111 8.42 0.00 0.00 5.19
3041 5370 3.446570 GCAGCTGACACCATGCCC 61.447 66.667 20.43 0.00 32.49 5.36
3044 5373 0.393944 ATCTGGCAGCTGACACCATG 60.394 55.000 21.20 9.51 31.79 3.66
3051 5821 1.377612 AGCAACATCTGGCAGCTGA 59.622 52.632 23.90 0.87 33.67 4.26
3089 5859 5.452356 CCTCATCGCCATCATAGTATGCATA 60.452 44.000 1.16 1.16 0.00 3.14
3103 5873 1.689243 ATACAGCAGCCTCATCGCCA 61.689 55.000 0.00 0.00 0.00 5.69
3133 5903 0.392998 ATGGAAGTAGGTTGGCAGCG 60.393 55.000 0.00 0.00 0.00 5.18
3244 6016 5.688814 ATTACTGGACTACACCCCTTAAC 57.311 43.478 0.00 0.00 0.00 2.01
3469 6242 7.667635 TGTCAATCATGGTACTAAAAATCCACA 59.332 33.333 0.00 0.00 32.60 4.17
3566 6339 3.744660 AGAAGTCAAGTAGTTGGCAAGG 58.255 45.455 16.90 0.00 41.08 3.61
3644 6420 3.814625 TGCTGTCAAAACTGGTACATGA 58.185 40.909 0.00 0.00 38.20 3.07
3661 6437 1.391485 CCTCGAACGATCAGTTTGCTG 59.609 52.381 10.85 0.00 44.35 4.41
3671 6447 1.472728 GGCATACAACCCTCGAACGAT 60.473 52.381 0.00 0.00 0.00 3.73
3673 6449 0.390603 TGGCATACAACCCTCGAACG 60.391 55.000 0.00 0.00 0.00 3.95
3790 6661 3.057969 TGGACAAACAGGACTGCATAG 57.942 47.619 0.00 0.00 0.00 2.23
3799 6670 5.009854 ACTGTGATTTTTGGACAAACAGG 57.990 39.130 14.65 3.62 0.00 4.00
4001 6892 5.404466 AAGCAAACAAGCTGCCATTATAA 57.596 34.783 0.00 0.00 45.89 0.98
4021 6913 4.479619 GCACTTTGAGGAATGTTGCTAAG 58.520 43.478 0.00 0.00 0.00 2.18
4042 6934 1.805869 AGCTATCATTCGCATCAGGC 58.194 50.000 0.00 0.00 39.90 4.85
4079 6971 7.306283 GCATGTTTTGTCAAAGTGCGTAAAATA 60.306 33.333 13.21 0.00 29.73 1.40
4086 6978 1.522258 GGCATGTTTTGTCAAAGTGCG 59.478 47.619 18.20 5.10 36.34 5.34
4094 6986 4.494484 GGTAAATCCAGGCATGTTTTGTC 58.506 43.478 0.00 0.00 35.97 3.18
4311 7203 6.318648 ACAAGACACACTTCAGCTAAATGAAA 59.681 34.615 0.00 0.00 38.66 2.69
4314 7206 5.237127 TGACAAGACACACTTCAGCTAAATG 59.763 40.000 0.00 0.00 36.61 2.32
4414 7308 6.442541 TGGAATTTAAAGGTGTAGTGAGGA 57.557 37.500 0.00 0.00 0.00 3.71
4418 7312 9.244799 GAAAAGTTGGAATTTAAAGGTGTAGTG 57.755 33.333 0.00 0.00 0.00 2.74
4421 7315 8.541899 AGGAAAAGTTGGAATTTAAAGGTGTA 57.458 30.769 0.00 0.00 0.00 2.90
4435 7329 5.940470 AGCACAGTATAGAAGGAAAAGTTGG 59.060 40.000 0.00 0.00 0.00 3.77
4437 7331 5.940470 CCAGCACAGTATAGAAGGAAAAGTT 59.060 40.000 0.00 0.00 0.00 2.66
4449 7344 4.634012 AAAGGTTGACCAGCACAGTATA 57.366 40.909 2.56 0.00 38.89 1.47
4520 7418 9.015577 CGAAAACAAATTTCAGTACAGCTAAAA 57.984 29.630 0.00 0.00 46.42 1.52
4524 7422 5.971202 CACGAAAACAAATTTCAGTACAGCT 59.029 36.000 0.00 0.00 46.42 4.24
4525 7423 5.741982 ACACGAAAACAAATTTCAGTACAGC 59.258 36.000 0.00 0.00 46.42 4.40
4536 7435 6.091986 ACAAAAGCATGAACACGAAAACAAAT 59.908 30.769 0.00 0.00 0.00 2.32
4549 7448 5.259832 TGTGTGAATGACAAAAGCATGAA 57.740 34.783 0.00 0.00 35.91 2.57
4667 7566 4.648651 TGGAGTAACAAACTTAAGGAGGC 58.351 43.478 7.53 0.00 39.07 4.70
4698 7597 5.903810 AGTCGAAGTATTGTATCACTTCCC 58.096 41.667 8.45 1.37 45.09 3.97
4704 7603 9.529325 CTGGAAATAAGTCGAAGTATTGTATCA 57.471 33.333 3.33 1.11 0.00 2.15
4708 7607 6.313905 CAGCTGGAAATAAGTCGAAGTATTGT 59.686 38.462 5.57 0.00 0.00 2.71
4883 7784 1.133790 AGATTGGCATTTGCTTCGAGC 59.866 47.619 2.12 0.58 42.82 5.03
4886 7787 2.950433 ACAAGATTGGCATTTGCTTCG 58.050 42.857 2.12 0.00 41.70 3.79
5016 7918 2.810274 CCACATCAAGGATCCTAATGCG 59.190 50.000 26.14 20.21 0.00 4.73
5205 8111 7.873719 TCATAACCAAGAACAGTTTCTCAAA 57.126 32.000 0.00 0.00 41.56 2.69
5214 8120 7.097192 TGCTAGTACTTCATAACCAAGAACAG 58.903 38.462 0.00 0.00 0.00 3.16
5216 8122 7.603024 ACTTGCTAGTACTTCATAACCAAGAAC 59.397 37.037 0.00 0.00 33.39 3.01
5234 8140 8.607459 CAAGATTTACCAACATCTACTTGCTAG 58.393 37.037 0.00 0.00 0.00 3.42
5235 8141 8.492673 CAAGATTTACCAACATCTACTTGCTA 57.507 34.615 0.00 0.00 0.00 3.49
5237 8143 6.030228 GCAAGATTTACCAACATCTACTTGC 58.970 40.000 0.00 0.00 46.08 4.01
5238 8144 7.144722 TGCAAGATTTACCAACATCTACTTG 57.855 36.000 0.00 0.00 36.39 3.16
5240 8146 5.882557 CCTGCAAGATTTACCAACATCTACT 59.117 40.000 0.00 0.00 34.07 2.57
5241 8147 5.880332 TCCTGCAAGATTTACCAACATCTAC 59.120 40.000 0.00 0.00 34.07 2.59
5259 8165 5.255687 ACATAGATTGACACAAATCCTGCA 58.744 37.500 0.00 0.00 37.28 4.41
5296 8202 0.407139 ACCACGTGTAGGAGGTAGGT 59.593 55.000 15.65 0.00 31.82 3.08
5311 8217 4.386867 TTCTCAGATCCGTATTGACCAC 57.613 45.455 0.00 0.00 0.00 4.16
5373 8279 4.729868 AGAATGGCAGTAGGTCAAAAGTT 58.270 39.130 0.00 0.00 32.77 2.66
5389 8295 8.830201 TGTAATGAAATTTTGGACAAGAATGG 57.170 30.769 0.00 0.00 37.87 3.16
5410 8316 8.762481 TTAGAGTTAGCATGATAGGACTGTAA 57.238 34.615 7.83 7.83 0.00 2.41
5415 8321 6.858993 CGACTTTAGAGTTAGCATGATAGGAC 59.141 42.308 0.00 0.00 35.88 3.85
5419 8326 6.504398 CACCGACTTTAGAGTTAGCATGATA 58.496 40.000 0.00 0.00 35.88 2.15
5426 8333 5.000012 AGATGCACCGACTTTAGAGTTAG 58.000 43.478 0.00 0.00 35.88 2.34
5497 8407 5.046231 GGTCCACAAGGAGAGATAAAGTTCT 60.046 44.000 0.00 0.00 46.92 3.01
5505 8415 1.905215 CAGTGGTCCACAAGGAGAGAT 59.095 52.381 24.02 0.00 46.92 2.75
5516 8426 4.825085 GTGTCCTAAAATTTCAGTGGTCCA 59.175 41.667 0.00 0.00 0.00 4.02
5545 8455 6.338937 ACTTCGGATACCATTAACTGAACTC 58.661 40.000 0.00 0.00 0.00 3.01
5556 8466 3.046374 AGGGCTTTACTTCGGATACCAT 58.954 45.455 0.00 0.00 0.00 3.55
5557 8467 2.474112 AGGGCTTTACTTCGGATACCA 58.526 47.619 0.00 0.00 0.00 3.25
5558 8468 4.617762 CGATAGGGCTTTACTTCGGATACC 60.618 50.000 0.00 0.00 0.00 2.73
5559 8469 4.022503 ACGATAGGGCTTTACTTCGGATAC 60.023 45.833 0.00 0.00 43.77 2.24
5560 8470 4.022589 CACGATAGGGCTTTACTTCGGATA 60.023 45.833 0.00 0.00 43.77 2.59
5600 8510 4.764679 TGGCTTGTGATGTTTCATACAC 57.235 40.909 0.00 0.00 40.19 2.90
5606 8516 3.029320 TGCAATGGCTTGTGATGTTTC 57.971 42.857 0.00 0.00 41.91 2.78
5607 8517 3.132925 GTTGCAATGGCTTGTGATGTTT 58.867 40.909 0.59 0.00 41.91 2.83
5642 8552 8.462016 GCAAACAAGTGATATTACTTCCAAGAT 58.538 33.333 9.79 0.00 38.78 2.40
5678 8588 4.766891 CCTGATTTGAAAGAAACTGCCCTA 59.233 41.667 0.00 0.00 0.00 3.53
5686 8596 4.281435 TGAGCATGCCTGATTTGAAAGAAA 59.719 37.500 15.66 0.00 0.00 2.52
5697 8607 1.271488 TGTCAACATGAGCATGCCTGA 60.271 47.619 15.66 10.22 42.39 3.86
5701 8611 5.865552 ACTAAAAATGTCAACATGAGCATGC 59.134 36.000 10.51 10.51 42.39 4.06
5705 8615 6.012658 TCCACTAAAAATGTCAACATGAGC 57.987 37.500 0.00 0.00 36.56 4.26
5708 8618 7.526608 ACGTATCCACTAAAAATGTCAACATG 58.473 34.615 0.00 0.00 36.56 3.21
5760 8670 8.527810 TGTTTCAACTGAAAACAGGTAGAAAAT 58.472 29.630 6.46 0.00 44.58 1.82
5765 8675 6.136071 CGATGTTTCAACTGAAAACAGGTAG 58.864 40.000 6.46 0.00 44.58 3.18
5782 8692 5.937540 TGGTGATGAATACAGAACGATGTTT 59.062 36.000 0.00 0.00 34.56 2.83
5811 8721 3.674753 GTGCAGCACATAAACAAATGGAC 59.325 43.478 21.22 0.00 34.08 4.02
5813 8723 3.916761 AGTGCAGCACATAAACAAATGG 58.083 40.909 27.35 0.00 36.74 3.16
5819 8729 2.973224 CGTGAAAGTGCAGCACATAAAC 59.027 45.455 27.35 17.45 36.74 2.01
5820 8730 2.031245 CCGTGAAAGTGCAGCACATAAA 60.031 45.455 27.35 7.56 36.74 1.40
5837 8747 7.769272 AAAATAATTGAATAACATGGCCGTG 57.231 32.000 23.83 23.83 0.00 4.94
5859 8770 5.288232 CAGCGTGAACAAGAATGAACAAAAA 59.712 36.000 0.00 0.00 0.00 1.94
5863 8774 2.286950 GCAGCGTGAACAAGAATGAACA 60.287 45.455 0.00 0.00 0.00 3.18
5864 8775 2.031682 AGCAGCGTGAACAAGAATGAAC 60.032 45.455 0.00 0.00 0.00 3.18
5866 8777 1.882912 AGCAGCGTGAACAAGAATGA 58.117 45.000 0.00 0.00 0.00 2.57
5871 8782 3.228749 CATGTTTAGCAGCGTGAACAAG 58.771 45.455 13.01 7.18 35.83 3.16
5895 8806 3.813529 AAGTAACTGCAGCATCGTTTC 57.186 42.857 15.27 0.00 0.00 2.78
5900 8811 2.860735 CTCCGTAAGTAACTGCAGCATC 59.139 50.000 15.27 3.97 0.00 3.91
5903 8814 2.649331 TCTCCGTAAGTAACTGCAGC 57.351 50.000 15.27 0.00 0.00 5.25
5904 8815 4.371855 TGATCTCCGTAAGTAACTGCAG 57.628 45.455 13.48 13.48 0.00 4.41
5916 8827 0.179000 GCCACTCCAATGATCTCCGT 59.821 55.000 0.00 0.00 0.00 4.69
5962 8873 2.482142 CCATAACCAGCGAGGAGAAGAC 60.482 54.545 5.19 0.00 41.22 3.01
5973 8884 2.223665 GCTGATGAAAGCCATAACCAGC 60.224 50.000 0.00 0.00 37.20 4.85
6015 8926 3.355378 TGTTGATTACATTGGCCTCTGG 58.645 45.455 3.32 0.00 0.00 3.86
6024 8935 6.919662 CAGTGCTTTGTTCTGTTGATTACATT 59.080 34.615 0.00 0.00 35.85 2.71
6036 8947 2.557920 AGCTAGCAGTGCTTTGTTCT 57.442 45.000 25.23 10.33 40.44 3.01
6078 8989 4.932200 CCCAAGTACAACAAGAGACATCTC 59.068 45.833 0.26 0.26 43.17 2.75
6159 9070 9.654417 GACAAATAAGTAAAACGTTCTGCTAAA 57.346 29.630 0.00 0.00 0.00 1.85
6160 9071 9.048446 AGACAAATAAGTAAAACGTTCTGCTAA 57.952 29.630 0.00 0.00 0.00 3.09
6162 9073 7.352739 CAGACAAATAAGTAAAACGTTCTGCT 58.647 34.615 0.00 0.00 0.00 4.24
6186 9098 4.831107 TCATGTGTTTCTGCACTATAGCA 58.169 39.130 0.00 0.00 43.35 3.49
6221 9133 2.838736 ACAAGAGCACCTGTTACAGTG 58.161 47.619 11.68 10.38 0.00 3.66
6317 9235 0.898320 TGTCCTGGCTTCAGACTAGC 59.102 55.000 0.00 0.00 40.86 3.42
6342 9260 5.514204 CGACGGTGTATTTTCTCGTAAATCT 59.486 40.000 0.00 0.00 34.06 2.40
6343 9261 5.287035 ACGACGGTGTATTTTCTCGTAAATC 59.713 40.000 0.00 0.00 32.84 2.17
6362 9289 2.663602 CTGACATCTTCCTGAAACGACG 59.336 50.000 0.00 0.00 0.00 5.12
6372 9299 3.503363 TGCAACATTGTCTGACATCTTCC 59.497 43.478 11.86 0.29 0.00 3.46
6373 9300 4.754372 TGCAACATTGTCTGACATCTTC 57.246 40.909 11.86 0.56 0.00 2.87
6374 9301 5.717078 AATGCAACATTGTCTGACATCTT 57.283 34.783 11.86 0.66 0.00 2.40
6388 9349 6.822667 ACATTCAGAAGTCATAATGCAACA 57.177 33.333 0.00 0.00 33.57 3.33
6424 9385 4.098654 TCGAAAGGGAAAATGTTCTGCAAA 59.901 37.500 0.00 0.00 33.92 3.68
6468 9429 6.472887 CCCATGTTGACCTTAGTTTCTTAGA 58.527 40.000 0.00 0.00 0.00 2.10
6470 9431 5.007682 GCCCATGTTGACCTTAGTTTCTTA 58.992 41.667 0.00 0.00 0.00 2.10
6477 9438 5.380043 AGAATATGCCCATGTTGACCTTAG 58.620 41.667 0.00 0.00 0.00 2.18
6479 9440 4.255510 AGAATATGCCCATGTTGACCTT 57.744 40.909 0.00 0.00 0.00 3.50
6497 9502 2.091541 GGGGCATTCGATTCACAAGAA 58.908 47.619 0.00 0.00 38.31 2.52
6500 9505 1.653094 GCGGGGCATTCGATTCACAA 61.653 55.000 0.00 0.00 0.00 3.33
6502 9507 2.715624 GCGGGGCATTCGATTCAC 59.284 61.111 0.00 0.00 0.00 3.18
6503 9508 2.894879 CGCGGGGCATTCGATTCA 60.895 61.111 0.00 0.00 0.00 2.57
6504 9509 3.649986 CCGCGGGGCATTCGATTC 61.650 66.667 20.10 0.00 0.00 2.52
6531 9596 5.755409 TCAGGCTTGGAGAATAACTACAA 57.245 39.130 0.00 0.00 46.01 2.41
6537 9602 4.780021 ACTCTCTTCAGGCTTGGAGAATAA 59.220 41.667 8.37 0.00 38.49 1.40
6538 9603 4.357325 ACTCTCTTCAGGCTTGGAGAATA 58.643 43.478 8.37 0.00 38.49 1.75
6547 9612 2.883026 ACAGTGTACTCTCTTCAGGCT 58.117 47.619 0.00 0.00 0.00 4.58
6548 9613 3.243907 ACAACAGTGTACTCTCTTCAGGC 60.244 47.826 0.00 0.00 35.72 4.85
6551 9616 5.972935 TGAAACAACAGTGTACTCTCTTCA 58.027 37.500 0.00 0.00 36.80 3.02
6552 9617 6.273825 TCTGAAACAACAGTGTACTCTCTTC 58.726 40.000 0.00 0.00 36.80 2.87
6559 9635 7.126398 GTGAGAAATCTGAAACAACAGTGTAC 58.874 38.462 0.00 0.00 36.80 2.90
6572 9648 6.497259 ACTTGGTAGTAAGGTGAGAAATCTGA 59.503 38.462 0.00 0.00 31.21 3.27
6574 9650 6.936968 ACTTGGTAGTAAGGTGAGAAATCT 57.063 37.500 0.00 0.00 31.21 2.40
6575 9651 8.258708 ACATACTTGGTAGTAAGGTGAGAAATC 58.741 37.037 0.00 0.00 40.14 2.17
6581 9657 7.837689 AGTCATACATACTTGGTAGTAAGGTGA 59.162 37.037 0.00 0.00 40.14 4.02
6582 9658 8.008513 AGTCATACATACTTGGTAGTAAGGTG 57.991 38.462 0.00 0.00 40.14 4.00
6588 9664 6.214819 ACCCAAAGTCATACATACTTGGTAGT 59.785 38.462 0.00 0.00 37.26 2.73
6604 9680 4.983671 AACAACTTTCAGACCCAAAGTC 57.016 40.909 0.00 0.00 42.14 3.01
6605 9681 5.589050 GTCTAACAACTTTCAGACCCAAAGT 59.411 40.000 0.00 0.00 44.34 2.66
6617 9777 4.644685 AGTGCACCATTGTCTAACAACTTT 59.355 37.500 14.63 0.00 41.40 2.66
6621 9781 5.411361 GTCATAGTGCACCATTGTCTAACAA 59.589 40.000 14.63 0.00 42.95 2.83
6634 9794 6.683974 AAATGTTCATAGGTCATAGTGCAC 57.316 37.500 9.40 9.40 0.00 4.57
6639 9799 8.525290 AAAGGGAAAATGTTCATAGGTCATAG 57.475 34.615 0.00 0.00 35.25 2.23
6646 9806 7.023575 CACTTCGAAAGGGAAAATGTTCATAG 58.976 38.462 0.00 0.00 35.25 2.23
6648 9808 5.301805 ACACTTCGAAAGGGAAAATGTTCAT 59.698 36.000 0.00 0.00 35.35 2.57
6679 9890 5.508153 GCCGCTTGTATGATTCTTCTCTAGA 60.508 44.000 0.00 0.00 0.00 2.43
6694 9905 1.807981 CGATTGTCCGCCGCTTGTA 60.808 57.895 0.00 0.00 0.00 2.41
6705 9916 4.161333 CCTGCAAATTTGTCTCGATTGTC 58.839 43.478 19.03 0.00 0.00 3.18
6853 10067 1.594331 GTTTCAGTTCGGTTCAGGCT 58.406 50.000 0.00 0.00 0.00 4.58
6854 10068 0.234884 CGTTTCAGTTCGGTTCAGGC 59.765 55.000 0.00 0.00 0.00 4.85
6898 10114 1.029681 GTGAGTGAAACCCAACCCAC 58.970 55.000 0.00 0.00 37.80 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.