Multiple sequence alignment - TraesCS5A01G401500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G401500 chr5A 100.000 7071 0 0 1 7071 594320655 594327725 0.000000e+00 13058
1 TraesCS5A01G401500 chr5A 85.667 300 32 4 968 1259 548634548 548634844 8.910000e-79 305
2 TraesCS5A01G401500 chr5A 90.909 88 8 0 2581 2668 382114945 382114858 1.250000e-22 119
3 TraesCS5A01G401500 chr5D 90.393 3133 212 42 1 3104 475149887 475152959 0.000000e+00 4036
4 TraesCS5A01G401500 chr5D 93.398 1030 49 11 4021 5040 475154084 475155104 0.000000e+00 1507
5 TraesCS5A01G401500 chr5D 89.447 995 65 21 5842 6807 475156002 475156985 0.000000e+00 1219
6 TraesCS5A01G401500 chr5D 93.325 839 32 8 3112 3928 475153250 475154086 0.000000e+00 1218
7 TraesCS5A01G401500 chr5D 87.992 508 43 7 5081 5572 475155248 475155753 1.020000e-162 584
8 TraesCS5A01G401500 chr5D 92.500 80 6 0 2589 2668 478164185 478164264 1.610000e-21 115
9 TraesCS5A01G401500 chr5D 95.385 65 2 1 6821 6884 475156971 475157035 1.250000e-17 102
10 TraesCS5A01G401500 chr5B 92.352 2628 147 29 570 3186 582389981 582392565 0.000000e+00 3690
11 TraesCS5A01G401500 chr5B 86.941 1095 82 33 5658 6720 582395374 582396439 0.000000e+00 1173
12 TraesCS5A01G401500 chr5B 93.668 758 24 11 3189 3928 582392665 582393416 0.000000e+00 1112
13 TraesCS5A01G401500 chr5B 90.769 585 41 7 5081 5652 582394748 582395332 0.000000e+00 769
14 TraesCS5A01G401500 chr5B 94.167 480 23 1 4021 4500 582393414 582393888 0.000000e+00 726
15 TraesCS5A01G401500 chr5B 89.394 594 28 9 4515 5078 582394120 582394708 0.000000e+00 715
16 TraesCS5A01G401500 chr5B 89.300 486 39 10 1 482 582389131 582389607 1.310000e-166 597
17 TraesCS5A01G401500 chr5B 92.766 235 10 4 4305 4535 582393884 582394115 4.090000e-87 333
18 TraesCS5A01G401500 chr4A 97.000 100 3 0 3924 4023 650040981 650040882 1.220000e-37 169
19 TraesCS5A01G401500 chr4A 92.771 83 6 0 2586 2668 662286420 662286502 3.460000e-23 121
20 TraesCS5A01G401500 chr4A 92.683 82 6 0 2586 2667 662286500 662286419 1.250000e-22 119
21 TraesCS5A01G401500 chr7D 96.117 103 3 1 3921 4023 407261306 407261205 4.390000e-37 167
22 TraesCS5A01G401500 chr7D 95.238 105 3 2 3920 4023 162222312 162222209 1.580000e-36 165
23 TraesCS5A01G401500 chr7D 93.578 109 5 2 3927 4034 60439692 60439585 2.040000e-35 161
24 TraesCS5A01G401500 chr7B 94.340 106 6 0 3918 4023 706811037 706811142 5.680000e-36 163
25 TraesCS5A01G401500 chr2D 93.578 109 7 0 3919 4027 340594222 340594114 5.680000e-36 163
26 TraesCS5A01G401500 chr1B 94.340 106 6 0 3920 4025 301472068 301472173 5.680000e-36 163
27 TraesCS5A01G401500 chr6D 93.519 108 7 0 3927 4034 389999794 389999687 2.040000e-35 161
28 TraesCS5A01G401500 chr3A 92.857 112 4 4 3922 4032 638437002 638437110 7.340000e-35 159
29 TraesCS5A01G401500 chr1D 94.737 76 4 0 2586 2661 410795906 410795981 1.250000e-22 119
30 TraesCS5A01G401500 chr2B 89.535 86 9 0 2586 2671 247368620 247368535 7.500000e-20 110
31 TraesCS5A01G401500 chr3D 84.762 105 10 5 2567 2669 372318743 372318643 4.510000e-17 100


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G401500 chr5A 594320655 594327725 7070 False 13058.000000 13058 100.000000 1 7071 1 chr5A.!!$F2 7070
1 TraesCS5A01G401500 chr5D 475149887 475157035 7148 False 1444.333333 4036 91.656667 1 6884 6 chr5D.!!$F2 6883
2 TraesCS5A01G401500 chr5B 582389131 582396439 7308 False 1139.375000 3690 91.169625 1 6720 8 chr5B.!!$F1 6719

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
215 217 0.746923 GCACAGGAGATGCATGCAGA 60.747 55.000 26.69 2.79 42.88 4.26 F
1609 1921 0.537188 TAGGCTGTTACTGCTCCTGC 59.463 55.000 13.54 0.00 40.20 4.85 F
2090 2407 0.443478 GCAATTGCATTTTCCACCGC 59.557 50.000 25.36 0.00 41.59 5.68 F
2790 3108 1.202604 AGTACCAGTCAACGTGGTTGG 60.203 52.381 12.71 12.71 46.73 3.77 F
3942 4682 0.115745 AGGTACTCCCTCCGTTCCAA 59.884 55.000 0.00 0.00 40.71 3.53 F
5043 6033 0.035598 TGTGCGGCAAGGCTTACTTA 59.964 50.000 3.23 0.00 37.29 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1681 1993 0.820871 AAGCAAAACCTTTGCCGACA 59.179 45.0 17.99 0.0 45.98 4.35 R
2772 3090 0.107081 CCCAACCACGTTGACTGGTA 59.893 55.0 6.09 0.0 45.28 3.25 R
3360 4064 0.752054 CACCAGCCTTTTTCTTGCCA 59.248 50.0 0.00 0.0 0.00 4.92 R
4473 5406 1.915141 CATGAAACCAGCTCCACCTT 58.085 50.0 0.00 0.0 0.00 3.50 R
5794 6973 0.383949 GCAACTCCGAAGCCAAACAA 59.616 50.0 0.00 0.0 0.00 2.83 R
6947 8174 0.039618 TTCCAGGATCAGGGCCAAAC 59.960 55.0 6.18 0.0 0.00 2.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.676839 CACATCTCATGACAGTTGCTCC 59.323 50.000 0.00 0.00 0.00 4.70
40 41 3.924686 GCTCCACAAAGCAATGATGAAAG 59.075 43.478 0.00 0.00 42.05 2.62
97 98 9.265901 AGATACAATTCTCGTAAATCCAATGAG 57.734 33.333 0.00 0.00 0.00 2.90
201 203 2.434134 GGTACGCTTCGTCGCACAG 61.434 63.158 0.00 0.00 41.54 3.66
209 211 2.125952 CGTCGCACAGGAGATGCA 60.126 61.111 0.00 0.00 43.57 3.96
215 217 0.746923 GCACAGGAGATGCATGCAGA 60.747 55.000 26.69 2.79 42.88 4.26
246 248 3.717707 ACGATAAGATGTAACGCATGCT 58.282 40.909 17.13 0.00 38.06 3.79
284 286 8.012809 TGCACACTAAAGTTACGATAAACATTG 58.987 33.333 0.00 0.00 0.00 2.82
285 287 7.007099 GCACACTAAAGTTACGATAAACATTGC 59.993 37.037 0.00 0.00 0.00 3.56
344 346 4.387559 CAGTACTCGAGTCGATCCATCTAG 59.612 50.000 23.89 4.10 34.61 2.43
357 359 1.139989 CATCTAGCATTACGCCACCG 58.860 55.000 0.00 0.00 44.04 4.94
407 409 5.652744 AACGCCACGTCAAATAGATAATC 57.347 39.130 0.00 0.00 39.99 1.75
444 446 5.711036 ACCTACCAATCTATCTGTATCCGTC 59.289 44.000 0.00 0.00 0.00 4.79
459 461 2.486504 GTCGCACCGACGGATGTA 59.513 61.111 23.38 5.38 46.56 2.29
499 503 3.034562 CGTTATCTTAGCGACGAAGGAC 58.965 50.000 0.00 0.00 37.69 3.85
501 505 2.563471 ATCTTAGCGACGAAGGACAC 57.437 50.000 0.00 0.00 0.00 3.67
504 508 1.180456 TTAGCGACGAAGGACACCCA 61.180 55.000 0.00 0.00 33.88 4.51
508 512 1.219522 CGACGAAGGACACCCACAAC 61.220 60.000 0.00 0.00 33.88 3.32
514 518 1.645710 AGGACACCCACAACCTAGAG 58.354 55.000 0.00 0.00 33.88 2.43
525 529 2.824341 ACAACCTAGAGTCGGAAATCGT 59.176 45.455 0.00 0.00 40.32 3.73
531 535 1.666700 AGAGTCGGAAATCGTCGAGAG 59.333 52.381 0.00 0.00 40.32 3.20
539 543 4.425520 GGAAATCGTCGAGAGAGTGAAAT 58.574 43.478 0.00 0.00 43.49 2.17
546 550 4.109050 GTCGAGAGAGTGAAATAGCCTTG 58.891 47.826 0.00 0.00 43.49 3.61
555 559 5.376625 AGTGAAATAGCCTTGTTTGTCTCA 58.623 37.500 0.00 0.00 0.00 3.27
560 564 7.652909 TGAAATAGCCTTGTTTGTCTCAAATTG 59.347 33.333 0.00 0.00 0.00 2.32
562 566 2.802247 GCCTTGTTTGTCTCAAATTGCC 59.198 45.455 0.00 0.00 0.00 4.52
565 569 3.096489 TGTTTGTCTCAAATTGCCTGC 57.904 42.857 0.00 0.00 0.00 4.85
566 570 2.429971 TGTTTGTCTCAAATTGCCTGCA 59.570 40.909 0.00 0.00 0.00 4.41
567 571 3.069872 TGTTTGTCTCAAATTGCCTGCAT 59.930 39.130 0.00 0.00 0.00 3.96
568 572 4.060205 GTTTGTCTCAAATTGCCTGCATT 58.940 39.130 0.00 0.00 0.00 3.56
608 898 5.888901 TCTAGTTTGAGTTCTCCTCTACCA 58.111 41.667 0.00 0.00 41.11 3.25
619 910 5.422214 TCTCCTCTACCAATTTGGAGAAC 57.578 43.478 22.19 0.00 46.91 3.01
658 949 4.022849 GCAAGAACATGCTCTGTAAAAGGT 60.023 41.667 0.00 0.00 43.06 3.50
659 950 5.455392 CAAGAACATGCTCTGTAAAAGGTG 58.545 41.667 0.00 0.00 36.98 4.00
665 956 4.503741 TGCTCTGTAAAAGGTGAATTGC 57.496 40.909 0.00 0.00 0.00 3.56
674 965 5.549742 AAAAGGTGAATTGCAAATCCAGA 57.450 34.783 11.91 0.00 0.00 3.86
675 966 4.525912 AAGGTGAATTGCAAATCCAGAC 57.474 40.909 11.91 3.75 0.00 3.51
699 990 5.277857 ACACCATAAAATCCCTCTCTACG 57.722 43.478 0.00 0.00 0.00 3.51
720 1023 2.087462 CTGACGTCCACTGGAGCACA 62.087 60.000 14.12 0.00 29.39 4.57
751 1054 4.004982 TGACACCATCACATCATCACAAG 58.995 43.478 0.00 0.00 29.99 3.16
761 1064 0.968405 TCATCACAAGGGCAAAAGGC 59.032 50.000 0.00 0.00 43.74 4.35
796 1103 4.379143 GGGAAAACGTGACGCGGC 62.379 66.667 12.47 8.67 46.52 6.53
876 1184 3.777925 CGAAACCACGCGAGGCAG 61.778 66.667 23.09 7.58 0.00 4.85
877 1185 4.090057 GAAACCACGCGAGGCAGC 62.090 66.667 23.09 7.91 0.00 5.25
1275 1583 3.471806 GAGAAGGGCGAGGGGGAC 61.472 72.222 0.00 0.00 0.00 4.46
1317 1628 3.707189 GGGGAGGGGGAGGAGGAA 61.707 72.222 0.00 0.00 0.00 3.36
1327 1638 1.691163 GGGAGGAGGAAGAAGAGGAGG 60.691 61.905 0.00 0.00 0.00 4.30
1328 1639 1.289530 GGAGGAGGAAGAAGAGGAGGA 59.710 57.143 0.00 0.00 0.00 3.71
1329 1640 2.292587 GGAGGAGGAAGAAGAGGAGGAA 60.293 54.545 0.00 0.00 0.00 3.36
1347 1658 2.666317 GAAGAGGAGGAGGAGGAAGAG 58.334 57.143 0.00 0.00 0.00 2.85
1400 1711 3.435186 GTGAGGCGCCTTTGCTCC 61.435 66.667 33.34 17.47 42.94 4.70
1413 1724 1.198713 TTGCTCCCTGTCCATCTCTC 58.801 55.000 0.00 0.00 0.00 3.20
1476 1788 6.916387 TCGTTTTCATCGATCTGTTAGGATAC 59.084 38.462 0.00 0.00 32.30 2.24
1501 1813 2.500369 CACTGTGCATTCGCGTGC 60.500 61.111 14.20 14.20 45.25 5.34
1512 1824 3.633573 TCGCGTGCGATATCTTTGA 57.366 47.368 13.62 0.00 44.01 2.69
1525 1837 5.455849 CGATATCTTTGACCGAACAGTAGTG 59.544 44.000 0.34 0.00 0.00 2.74
1548 1860 2.675348 GGATTCAGGCGTTTCTCTCAAG 59.325 50.000 0.00 0.00 0.00 3.02
1605 1917 2.412089 CGTGTTTAGGCTGTTACTGCTC 59.588 50.000 13.54 4.71 0.00 4.26
1609 1921 0.537188 TAGGCTGTTACTGCTCCTGC 59.463 55.000 13.54 0.00 40.20 4.85
1636 1948 3.042682 TGTTATTATCTCGCCAGGGGAA 58.957 45.455 7.77 0.00 0.00 3.97
1641 1953 2.536997 ATCTCGCCAGGGGAAAACCG 62.537 60.000 7.77 0.00 41.60 4.44
1648 1960 3.733960 GGGGAAAACCGCGTCTGC 61.734 66.667 4.92 0.00 41.60 4.26
1681 1993 5.221884 TGCCATTGAAATCTTGGACCAAATT 60.222 36.000 8.59 8.31 31.94 1.82
1712 2024 2.408368 GGTTTTGCTTGCGTTTGCTATC 59.592 45.455 0.00 0.00 43.34 2.08
1794 2111 3.939740 ATCTGTTGATGGTACCATGCT 57.060 42.857 32.07 9.49 36.70 3.79
1965 2282 7.970061 ACACTTTATAGCTGCATTTGTTGTATG 59.030 33.333 1.02 0.00 0.00 2.39
2090 2407 0.443478 GCAATTGCATTTTCCACCGC 59.557 50.000 25.36 0.00 41.59 5.68
2132 2449 5.525012 TCATGCACTAGACATTGTAATGCTC 59.475 40.000 0.00 2.77 40.04 4.26
2135 2452 4.872691 GCACTAGACATTGTAATGCTCACT 59.127 41.667 0.00 3.05 40.04 3.41
2155 2472 6.567959 TCACTGATGCACTAGACATTCTAAG 58.432 40.000 0.00 0.58 0.00 2.18
2157 2474 6.255237 CACTGATGCACTAGACATTCTAAGTG 59.745 42.308 0.00 8.76 34.36 3.16
2201 2518 4.713814 TCTCCACAATCAGTAGAGATGCTT 59.286 41.667 0.00 0.00 39.58 3.91
2252 2569 1.420138 ACGACCAACTCAGGGACATTT 59.580 47.619 0.00 0.00 0.00 2.32
2297 2614 1.503294 CATTTTGTGCTGTGCATGCA 58.497 45.000 18.46 18.46 41.91 3.96
2342 2660 3.321111 ACCAGTGTAGAGTGTACCACAAG 59.679 47.826 0.00 0.00 36.74 3.16
2372 2690 7.469343 TGTGGAAAGGCAATATCCATGTATAT 58.531 34.615 3.52 0.00 44.55 0.86
2407 2725 4.142381 CCTCTTACTGCAAAGCAATTACCC 60.142 45.833 0.00 0.00 38.41 3.69
2415 2733 4.218635 TGCAAAGCAATTACCCGACAATTA 59.781 37.500 0.00 0.00 34.76 1.40
2462 2780 3.146066 TGTCCAATATTTGCTATCCCGC 58.854 45.455 0.00 0.00 0.00 6.13
2527 2845 4.468689 GTAGGGGCCGCTGTGGTC 62.469 72.222 31.29 6.15 43.80 4.02
2584 2902 5.180117 CCTGATTGTTGGTCTCTTTGTACTG 59.820 44.000 0.00 0.00 0.00 2.74
2611 2929 9.282569 CTACCTCTGTAACTAAATATAGGACGT 57.717 37.037 0.00 0.00 33.15 4.34
2772 3090 7.865706 AACTGTTGAAGATGTTGACTTAAGT 57.134 32.000 8.13 8.13 0.00 2.24
2789 3107 2.234300 AGTACCAGTCAACGTGGTTG 57.766 50.000 0.00 2.16 46.73 3.77
2790 3108 1.202604 AGTACCAGTCAACGTGGTTGG 60.203 52.381 12.71 12.71 46.73 3.77
2816 3136 8.234546 GGTTAAACACATGGTCTTACTACAATG 58.765 37.037 0.00 0.00 36.92 2.82
2907 3229 9.399797 TCAGATTAGAATGAAATACTGTGCAAT 57.600 29.630 0.00 0.00 0.00 3.56
2923 3245 4.218200 TGTGCAATTCAAGACACTAATGGG 59.782 41.667 0.00 0.00 34.14 4.00
3012 3334 6.938698 TTTTGGTATAGTTCCCACACTAGA 57.061 37.500 0.00 0.00 32.66 2.43
3043 3365 1.739562 GTGGAGCTGTTCTCAGGCG 60.740 63.158 0.00 0.00 43.70 5.52
3091 3414 3.854784 GCAGCACATCCTGTTGTCTTTTC 60.855 47.826 0.00 0.00 33.69 2.29
3288 3991 5.082059 GCACAACTTCTCGTATTGACAATG 58.918 41.667 11.05 0.00 0.00 2.82
3289 3992 5.082059 CACAACTTCTCGTATTGACAATGC 58.918 41.667 11.05 8.53 0.00 3.56
3360 4064 3.979911 TCAATTGCATAGGTTGGGTGAT 58.020 40.909 0.00 0.00 0.00 3.06
3510 4214 8.599624 AAACCTCATATCAGATGAATGGTTTT 57.400 30.769 11.22 0.21 40.55 2.43
3632 4336 4.720773 AGGAGGAAGATTCTGTGTGATGAT 59.279 41.667 0.00 0.00 0.00 2.45
3726 4430 2.513317 TGGCCATTGGATTCTGATGGTA 59.487 45.455 0.00 7.02 41.85 3.25
3770 4508 2.849966 CTCTCATACACACGCGCGC 61.850 63.158 32.58 23.91 0.00 6.86
3795 4533 3.400322 ACATCTGGGGAATATGAGGCATT 59.600 43.478 0.00 0.00 0.00 3.56
3903 4643 8.638685 AAAAATGCATGCTGACTCAATATAAC 57.361 30.769 20.33 0.00 0.00 1.89
3932 4672 8.813951 ACATACTATTTGCTAATAGGTACTCCC 58.186 37.037 25.13 0.00 44.96 4.30
3933 4673 9.036980 CATACTATTTGCTAATAGGTACTCCCT 57.963 37.037 25.13 9.61 44.96 4.20
3934 4674 7.541916 ACTATTTGCTAATAGGTACTCCCTC 57.458 40.000 25.13 0.00 44.96 4.30
3935 4675 5.827326 ATTTGCTAATAGGTACTCCCTCC 57.173 43.478 0.00 0.00 44.81 4.30
3936 4676 2.872732 TGCTAATAGGTACTCCCTCCG 58.127 52.381 0.00 0.00 44.81 4.63
3937 4677 2.176364 TGCTAATAGGTACTCCCTCCGT 59.824 50.000 0.00 0.00 44.81 4.69
3938 4678 3.229293 GCTAATAGGTACTCCCTCCGTT 58.771 50.000 0.00 0.00 44.81 4.44
3939 4679 3.255395 GCTAATAGGTACTCCCTCCGTTC 59.745 52.174 0.00 0.00 44.81 3.95
3940 4680 2.378378 ATAGGTACTCCCTCCGTTCC 57.622 55.000 0.00 0.00 44.81 3.62
3941 4681 1.002069 TAGGTACTCCCTCCGTTCCA 58.998 55.000 0.00 0.00 44.81 3.53
3942 4682 0.115745 AGGTACTCCCTCCGTTCCAA 59.884 55.000 0.00 0.00 40.71 3.53
3943 4683 0.978907 GGTACTCCCTCCGTTCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
3944 4684 1.348696 GGTACTCCCTCCGTTCCAAAA 59.651 52.381 0.00 0.00 0.00 2.44
3945 4685 2.026542 GGTACTCCCTCCGTTCCAAAAT 60.027 50.000 0.00 0.00 0.00 1.82
3946 4686 3.198417 GGTACTCCCTCCGTTCCAAAATA 59.802 47.826 0.00 0.00 0.00 1.40
3947 4687 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
3948 4688 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
3949 4689 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
3950 4690 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
3951 4691 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
3952 4692 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
3953 4693 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
3954 4694 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
3955 4695 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
3956 4696 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
3957 4697 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
3958 4698 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
3959 4699 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
3960 4700 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
3961 4701 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
3962 4702 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
3963 4703 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
3964 4704 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
3965 4705 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
3971 4711 8.184304 AGATGACTCAACTTTGTACTAACTCT 57.816 34.615 0.00 0.00 0.00 3.24
3972 4712 8.085296 AGATGACTCAACTTTGTACTAACTCTG 58.915 37.037 0.00 0.00 0.00 3.35
3973 4713 7.108841 TGACTCAACTTTGTACTAACTCTGT 57.891 36.000 0.00 0.00 0.00 3.41
3974 4714 8.229253 TGACTCAACTTTGTACTAACTCTGTA 57.771 34.615 0.00 0.00 0.00 2.74
3975 4715 8.133627 TGACTCAACTTTGTACTAACTCTGTAC 58.866 37.037 0.00 0.00 40.27 2.90
3976 4716 8.235359 ACTCAACTTTGTACTAACTCTGTACT 57.765 34.615 0.00 0.00 40.44 2.73
3977 4717 9.347240 ACTCAACTTTGTACTAACTCTGTACTA 57.653 33.333 0.00 0.00 40.44 1.82
3998 4738 7.974482 ACTAAAGTTAGTACAATGTTGGGTC 57.026 36.000 1.81 0.00 41.92 4.46
3999 4739 7.511268 ACTAAAGTTAGTACAATGTTGGGTCA 58.489 34.615 1.81 0.00 41.92 4.02
4000 4740 8.161425 ACTAAAGTTAGTACAATGTTGGGTCAT 58.839 33.333 1.81 0.00 41.92 3.06
4001 4741 7.448748 AAAGTTAGTACAATGTTGGGTCATC 57.551 36.000 0.00 0.00 0.00 2.92
4002 4742 6.374417 AGTTAGTACAATGTTGGGTCATCT 57.626 37.500 0.00 0.00 0.00 2.90
4003 4743 7.490657 AGTTAGTACAATGTTGGGTCATCTA 57.509 36.000 0.00 0.00 0.00 1.98
4004 4744 8.090788 AGTTAGTACAATGTTGGGTCATCTAT 57.909 34.615 0.00 0.00 0.00 1.98
4005 4745 8.548877 AGTTAGTACAATGTTGGGTCATCTATT 58.451 33.333 0.00 0.00 0.00 1.73
4006 4746 9.174166 GTTAGTACAATGTTGGGTCATCTATTT 57.826 33.333 0.00 0.00 0.00 1.40
4007 4747 9.747898 TTAGTACAATGTTGGGTCATCTATTTT 57.252 29.630 0.00 0.00 0.00 1.82
4008 4748 8.055279 AGTACAATGTTGGGTCATCTATTTTG 57.945 34.615 0.00 0.00 0.00 2.44
4009 4749 6.284891 ACAATGTTGGGTCATCTATTTTGG 57.715 37.500 0.00 0.00 0.00 3.28
4010 4750 6.015918 ACAATGTTGGGTCATCTATTTTGGA 58.984 36.000 0.00 0.00 0.00 3.53
4011 4751 6.496565 ACAATGTTGGGTCATCTATTTTGGAA 59.503 34.615 0.00 0.00 0.00 3.53
4012 4752 5.975693 TGTTGGGTCATCTATTTTGGAAC 57.024 39.130 0.00 0.00 0.00 3.62
4013 4753 4.457603 TGTTGGGTCATCTATTTTGGAACG 59.542 41.667 0.00 0.00 0.00 3.95
4014 4754 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
4015 4755 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
4016 4756 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
4017 4757 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
4018 4758 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
4019 4759 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
4033 4773 6.484643 GGAACGGAGGGAGTATAAATTTAACC 59.515 42.308 1.21 4.20 0.00 2.85
4049 4789 5.659440 TTTAACCCCATTGATGCTCTTTC 57.341 39.130 0.00 0.00 0.00 2.62
4123 4863 3.599730 TCTGACTGCACTAGAACATGG 57.400 47.619 0.00 0.00 0.00 3.66
4213 4953 3.432782 GCTGCGATGGATGAAAGAAAAG 58.567 45.455 0.00 0.00 0.00 2.27
4214 4954 3.127548 GCTGCGATGGATGAAAGAAAAGA 59.872 43.478 0.00 0.00 0.00 2.52
4215 4955 4.379813 GCTGCGATGGATGAAAGAAAAGAA 60.380 41.667 0.00 0.00 0.00 2.52
4216 4956 5.702865 CTGCGATGGATGAAAGAAAAGAAA 58.297 37.500 0.00 0.00 0.00 2.52
4217 4957 6.083098 TGCGATGGATGAAAGAAAAGAAAA 57.917 33.333 0.00 0.00 0.00 2.29
4240 4980 8.973835 AAATGAACAAAGAAAAACTGTCGTTA 57.026 26.923 0.00 0.00 31.86 3.18
4373 5306 6.889722 AGCTTAGTTGGCCTATGTTTATTTGA 59.110 34.615 3.32 0.00 0.00 2.69
4382 5315 8.301002 TGGCCTATGTTTATTTGAACTTGTTAC 58.699 33.333 3.32 0.00 0.00 2.50
4469 5402 8.341892 TGCCATTTAACATGTATGTACAAGAA 57.658 30.769 0.00 0.00 40.80 2.52
4488 5421 4.740902 AGAATAAAAGGTGGAGCTGGTTT 58.259 39.130 0.00 0.00 0.00 3.27
4500 5433 3.252701 GGAGCTGGTTTCATGCATCATAG 59.747 47.826 0.00 0.00 0.00 2.23
4509 5442 6.283694 GTTTCATGCATCATAGTAGACTCCA 58.716 40.000 0.00 0.00 0.00 3.86
4511 5444 6.676990 TCATGCATCATAGTAGACTCCATT 57.323 37.500 0.00 0.00 0.00 3.16
4512 5445 6.461640 TCATGCATCATAGTAGACTCCATTG 58.538 40.000 0.00 0.00 0.00 2.82
4513 5446 6.268387 TCATGCATCATAGTAGACTCCATTGA 59.732 38.462 0.00 0.00 0.00 2.57
4602 5580 0.178926 TAGGTCCCGTCTCACCCAAA 60.179 55.000 0.00 0.00 32.45 3.28
4673 5651 4.864704 AGAGAGACAGAAGTGAAGGTTC 57.135 45.455 0.00 0.00 0.00 3.62
4744 5722 8.928733 CAAGGTTATTGATGAAATGTCCTTTTG 58.071 33.333 0.00 0.00 38.97 2.44
4869 5847 6.318900 AGAGTATGTTGTCACGATCTGATGTA 59.681 38.462 0.00 0.00 0.00 2.29
4893 5871 9.646427 GTAGTGAAGAGAATGTGGGATTATATC 57.354 37.037 0.00 0.00 0.00 1.63
4929 5907 8.281212 ACTTACAGGTAAATGCTATTTTCCTG 57.719 34.615 26.70 26.70 38.48 3.86
4955 5933 9.831737 GGATATTGCATTACTGTTCATGATAAC 57.168 33.333 0.00 0.00 0.00 1.89
4975 5953 9.142515 TGATAACATCAATTTGAAATGTCAAGC 57.857 29.630 2.68 1.20 39.53 4.01
4976 5954 9.142515 GATAACATCAATTTGAAATGTCAAGCA 57.857 29.630 2.68 0.00 44.49 3.91
4982 5960 9.715121 ATCAATTTGAAATGTCAAGCAGTTTAT 57.285 25.926 2.68 0.00 44.49 1.40
5031 6021 1.494766 AAATTTTGCGGTTGTGCGGC 61.495 50.000 0.00 0.00 42.84 6.53
5043 6033 0.035598 TGTGCGGCAAGGCTTACTTA 59.964 50.000 3.23 0.00 37.29 2.24
5045 6035 1.017177 TGCGGCAAGGCTTACTTACG 61.017 55.000 0.00 1.72 37.29 3.18
5059 6049 6.400727 GGCTTACTTACGTAGTCATTGTTGTG 60.401 42.308 0.00 0.00 43.93 3.33
5110 6206 2.618241 CGGCAAACATGGTAGCATATGT 59.382 45.455 7.18 0.78 39.08 2.29
5271 6376 1.473258 TCCCATGGCAATGCTTACAC 58.527 50.000 6.09 0.00 31.93 2.90
5283 6388 6.073548 GGCAATGCTTACACTCTATGATACAC 60.074 42.308 4.82 0.00 0.00 2.90
5284 6389 6.346120 GCAATGCTTACACTCTATGATACACG 60.346 42.308 0.00 0.00 0.00 4.49
5290 6395 5.007385 ACACTCTATGATACACGTTTCCC 57.993 43.478 0.00 0.00 0.00 3.97
5304 6409 3.194968 ACGTTTCCCAGTGTACCTGATAG 59.805 47.826 11.58 2.79 44.49 2.08
5325 6430 5.028549 AGCCTGAGATTTGTGGTAGTATG 57.971 43.478 0.00 0.00 0.00 2.39
5403 6512 9.052759 GGGGTAATAACACATCTTAGTATTGTG 57.947 37.037 9.72 9.72 44.85 3.33
5446 6555 3.117625 TGGGATGTACGACAGGTCTAGAT 60.118 47.826 0.00 0.00 0.00 1.98
5450 6566 5.764192 GGATGTACGACAGGTCTAGATTACT 59.236 44.000 0.00 0.00 0.00 2.24
5527 6649 4.860907 CCATTGAAAACTCAAGTATGCTGC 59.139 41.667 0.00 0.00 32.69 5.25
5533 6655 3.252974 ACTCAAGTATGCTGCAGTACC 57.747 47.619 16.64 5.37 0.00 3.34
5593 6715 6.528014 CATCAAAGCATGCACACTTTTAAA 57.472 33.333 21.98 3.60 33.92 1.52
5597 6719 3.383761 AGCATGCACACTTTTAAACAGC 58.616 40.909 21.98 0.00 0.00 4.40
5620 6742 7.272084 CAGCAGCTTTTGTAGTCAAATCATTAC 59.728 37.037 0.00 0.00 42.14 1.89
5637 6760 4.161565 TCATTACTGTGGTATGGTGTCTCC 59.838 45.833 0.00 0.00 0.00 3.71
5640 6763 1.902508 CTGTGGTATGGTGTCTCCTGT 59.097 52.381 0.00 0.00 37.07 4.00
5644 6767 4.647853 TGTGGTATGGTGTCTCCTGTATAC 59.352 45.833 0.00 0.00 37.07 1.47
5653 6776 6.154021 TGGTGTCTCCTGTATACTCTTTTACC 59.846 42.308 4.17 5.75 37.07 2.85
5656 6815 6.154021 TGTCTCCTGTATACTCTTTTACCACC 59.846 42.308 4.17 0.00 0.00 4.61
5715 6874 3.442996 GTCGAGATGGACCAACTGG 57.557 57.895 9.32 8.24 42.17 4.00
5717 6876 1.450312 CGAGATGGACCAACTGGGC 60.450 63.158 9.32 0.00 44.61 5.36
5742 6921 8.006027 GCACTGCAATTTTCAGTTCTTTAAATC 58.994 33.333 7.24 0.00 42.38 2.17
5743 6922 9.252962 CACTGCAATTTTCAGTTCTTTAAATCT 57.747 29.630 7.24 0.00 42.38 2.40
5760 6939 9.455847 CTTTAAATCTTTCTGTCAGAAACTTGG 57.544 33.333 21.59 13.28 39.13 3.61
5761 6940 8.746052 TTAAATCTTTCTGTCAGAAACTTGGA 57.254 30.769 21.59 17.42 39.13 3.53
5762 6941 6.625873 AATCTTTCTGTCAGAAACTTGGAC 57.374 37.500 21.59 0.00 39.13 4.02
5763 6942 4.119862 TCTTTCTGTCAGAAACTTGGACG 58.880 43.478 21.59 11.73 39.13 4.79
5764 6943 3.536956 TTCTGTCAGAAACTTGGACGT 57.463 42.857 13.00 0.00 34.32 4.34
5766 6945 4.659111 TCTGTCAGAAACTTGGACGTTA 57.341 40.909 0.00 0.00 34.32 3.18
5771 6950 5.644636 TGTCAGAAACTTGGACGTTACTTTT 59.355 36.000 0.00 0.00 34.32 2.27
5772 6951 5.963586 GTCAGAAACTTGGACGTTACTTTTG 59.036 40.000 0.00 0.00 0.00 2.44
5780 6959 6.750039 ACTTGGACGTTACTTTTGATTGTTTG 59.250 34.615 0.00 0.00 0.00 2.93
5781 6960 6.438259 TGGACGTTACTTTTGATTGTTTGA 57.562 33.333 0.00 0.00 0.00 2.69
5782 6961 6.853720 TGGACGTTACTTTTGATTGTTTGAA 58.146 32.000 0.00 0.00 0.00 2.69
5792 6971 8.641541 ACTTTTGATTGTTTGAATACATCCACT 58.358 29.630 0.00 0.00 0.00 4.00
5793 6972 8.815141 TTTTGATTGTTTGAATACATCCACTG 57.185 30.769 0.00 0.00 0.00 3.66
5794 6973 7.523293 TTGATTGTTTGAATACATCCACTGT 57.477 32.000 0.00 0.00 42.13 3.55
5810 6989 1.308998 CTGTTGTTTGGCTTCGGAGT 58.691 50.000 0.00 0.00 0.00 3.85
5813 6992 0.383949 TTGTTTGGCTTCGGAGTTGC 59.616 50.000 0.00 0.00 0.00 4.17
5817 6996 0.951558 TTGGCTTCGGAGTTGCTTTC 59.048 50.000 0.00 0.00 0.00 2.62
5819 6998 1.346395 TGGCTTCGGAGTTGCTTTCTA 59.654 47.619 0.00 0.00 0.00 2.10
5821 7000 2.159824 GGCTTCGGAGTTGCTTTCTAAC 59.840 50.000 0.00 0.00 0.00 2.34
5822 7001 3.067833 GCTTCGGAGTTGCTTTCTAACT 58.932 45.455 0.00 0.00 40.84 2.24
5823 7002 3.498777 GCTTCGGAGTTGCTTTCTAACTT 59.501 43.478 0.00 0.00 38.42 2.66
5824 7003 4.611581 GCTTCGGAGTTGCTTTCTAACTTG 60.612 45.833 0.00 0.00 38.42 3.16
5825 7004 3.399330 TCGGAGTTGCTTTCTAACTTGG 58.601 45.455 0.00 0.00 38.42 3.61
5828 7013 4.036380 CGGAGTTGCTTTCTAACTTGGTTT 59.964 41.667 0.00 0.00 38.42 3.27
5831 7016 5.578776 AGTTGCTTTCTAACTTGGTTTTCG 58.421 37.500 0.00 0.00 34.91 3.46
5851 7036 7.856492 TTTCGAGATGTTGAAATTGTTCATG 57.144 32.000 1.14 0.00 43.29 3.07
5877 7062 9.178758 GTGGAATAGTAAGAAATGGTTGATCTT 57.821 33.333 0.00 0.00 37.23 2.40
5886 7071 8.868522 AAGAAATGGTTGATCTTATCTGAACA 57.131 30.769 0.00 0.00 31.88 3.18
5888 7073 7.337942 AGAAATGGTTGATCTTATCTGAACACC 59.662 37.037 0.00 0.00 0.00 4.16
5894 7079 7.284034 GGTTGATCTTATCTGAACACCATGATT 59.716 37.037 0.00 0.00 0.00 2.57
5895 7080 7.797038 TGATCTTATCTGAACACCATGATTG 57.203 36.000 0.00 0.00 0.00 2.67
5897 7082 8.485392 TGATCTTATCTGAACACCATGATTGTA 58.515 33.333 0.00 0.00 0.00 2.41
5899 7084 8.893219 TCTTATCTGAACACCATGATTGTATC 57.107 34.615 0.00 0.00 0.00 2.24
5908 7096 3.817084 ACCATGATTGTATCAATCTGCCG 59.183 43.478 18.81 9.43 43.50 5.69
5914 7102 2.486918 TGTATCAATCTGCCGCATCAG 58.513 47.619 0.00 0.00 35.46 2.90
5921 7109 0.175760 TCTGCCGCATCAGACTTACC 59.824 55.000 0.00 0.00 38.11 2.85
5925 7115 2.084546 GCCGCATCAGACTTACCTTTT 58.915 47.619 0.00 0.00 0.00 2.27
6075 7265 2.586648 ACAAAGGCAAAGTAGGGAGG 57.413 50.000 0.00 0.00 0.00 4.30
6140 7338 6.128418 GGTTTTGCTTTTCTTGTTTTGCAGTA 60.128 34.615 0.00 0.00 0.00 2.74
6221 7420 3.067601 GTGTGAATTCCGGTTGGACTTTT 59.932 43.478 0.00 0.00 46.45 2.27
6227 7426 1.151908 CGGTTGGACTTTTCCCCCA 59.848 57.895 0.00 0.00 42.01 4.96
6228 7427 0.251608 CGGTTGGACTTTTCCCCCAT 60.252 55.000 0.00 0.00 42.01 4.00
6261 7460 4.383931 AGGGTCTTCAGTGTCTACAGTA 57.616 45.455 0.00 0.00 0.00 2.74
6284 7483 3.494336 CGCCTGCGCTTTCTCCAG 61.494 66.667 9.73 0.00 0.00 3.86
6289 7491 1.227943 TGCGCTTTCTCCAGCAAGT 60.228 52.632 9.73 0.00 40.09 3.16
6321 7526 1.301716 ACGACCTTGCGTGCATTCT 60.302 52.632 0.00 0.00 43.79 2.40
6322 7527 1.291877 ACGACCTTGCGTGCATTCTC 61.292 55.000 0.00 0.00 43.79 2.87
6387 7599 0.458669 TAAGATCGGTTGTCTCGGGC 59.541 55.000 0.00 0.00 0.00 6.13
6388 7600 1.541310 AAGATCGGTTGTCTCGGGCA 61.541 55.000 0.00 0.00 0.00 5.36
6397 7609 0.821711 TGTCTCGGGCAACTTTTGGG 60.822 55.000 0.00 0.00 0.00 4.12
6401 7613 2.914908 CGGGCAACTTTTGGGGACG 61.915 63.158 0.00 0.00 0.00 4.79
6411 7623 2.668144 TTTGGGGACGAAAAGATGGT 57.332 45.000 0.00 0.00 0.00 3.55
6420 7632 2.844348 ACGAAAAGATGGTAGGGGTCAT 59.156 45.455 0.00 0.00 0.00 3.06
6446 7660 1.541670 GGGTGCTTCCACTTTCGTACA 60.542 52.381 0.00 0.00 41.75 2.90
6637 7854 7.163001 TCCACTGATCCTATCGATATTCTTG 57.837 40.000 5.40 5.77 0.00 3.02
6661 7878 9.974980 TTGATATCAAACTTAAAAGGGTGAAAC 57.025 29.630 15.82 0.00 32.11 2.78
6695 7913 5.227593 AGGTTGGGATCAAGTAGATATGGT 58.772 41.667 0.00 0.00 37.00 3.55
6697 7915 5.071788 GGTTGGGATCAAGTAGATATGGTCA 59.928 44.000 0.00 0.00 37.00 4.02
6703 7921 8.254508 GGGATCAAGTAGATATGGTCATTCTAC 58.745 40.741 16.46 16.46 41.29 2.59
6738 7965 0.248565 TGAGCTGGCTGTGCTAGAAG 59.751 55.000 7.10 0.00 39.54 2.85
6741 7968 1.066286 AGCTGGCTGTGCTAGAAGAAG 60.066 52.381 7.10 0.00 39.54 2.85
6749 7976 5.174395 GCTGTGCTAGAAGAAGATCTGAAA 58.826 41.667 0.00 0.00 0.00 2.69
6764 7991 9.282569 GAAGATCTGAAATATACTGGCTTCAAT 57.717 33.333 0.00 0.00 0.00 2.57
6792 8019 4.541705 TGAAAGATGGTTGTTGAAAGGGA 58.458 39.130 0.00 0.00 0.00 4.20
6793 8020 4.340950 TGAAAGATGGTTGTTGAAAGGGAC 59.659 41.667 0.00 0.00 0.00 4.46
6871 8098 0.530288 GCTAATGGGCGCAAAAGGAA 59.470 50.000 10.83 0.00 0.00 3.36
6898 8125 5.490139 AAAACTATCCATGCGTTGAGATG 57.510 39.130 0.00 0.00 0.00 2.90
6899 8126 3.827008 ACTATCCATGCGTTGAGATGT 57.173 42.857 0.00 0.00 0.00 3.06
6900 8127 3.461061 ACTATCCATGCGTTGAGATGTG 58.539 45.455 0.00 0.00 0.00 3.21
6901 8128 1.671979 ATCCATGCGTTGAGATGTGG 58.328 50.000 0.00 0.00 0.00 4.17
6902 8129 0.324614 TCCATGCGTTGAGATGTGGT 59.675 50.000 0.00 0.00 0.00 4.16
6903 8130 0.448990 CCATGCGTTGAGATGTGGTG 59.551 55.000 0.00 0.00 0.00 4.17
6904 8131 1.441738 CATGCGTTGAGATGTGGTGA 58.558 50.000 0.00 0.00 0.00 4.02
6905 8132 2.011947 CATGCGTTGAGATGTGGTGAT 58.988 47.619 0.00 0.00 0.00 3.06
6906 8133 1.441738 TGCGTTGAGATGTGGTGATG 58.558 50.000 0.00 0.00 0.00 3.07
6907 8134 1.270785 TGCGTTGAGATGTGGTGATGT 60.271 47.619 0.00 0.00 0.00 3.06
6908 8135 1.394917 GCGTTGAGATGTGGTGATGTC 59.605 52.381 0.00 0.00 0.00 3.06
6909 8136 2.932622 GCGTTGAGATGTGGTGATGTCT 60.933 50.000 0.00 0.00 0.00 3.41
6910 8137 2.669924 CGTTGAGATGTGGTGATGTCTG 59.330 50.000 0.00 0.00 0.00 3.51
6911 8138 3.614870 CGTTGAGATGTGGTGATGTCTGA 60.615 47.826 0.00 0.00 0.00 3.27
6912 8139 3.881937 TGAGATGTGGTGATGTCTGAG 57.118 47.619 0.00 0.00 0.00 3.35
6913 8140 3.434309 TGAGATGTGGTGATGTCTGAGA 58.566 45.455 0.00 0.00 0.00 3.27
6914 8141 4.028825 TGAGATGTGGTGATGTCTGAGAT 58.971 43.478 0.00 0.00 0.00 2.75
6915 8142 4.468868 TGAGATGTGGTGATGTCTGAGATT 59.531 41.667 0.00 0.00 0.00 2.40
6916 8143 4.767478 AGATGTGGTGATGTCTGAGATTG 58.233 43.478 0.00 0.00 0.00 2.67
6917 8144 4.468868 AGATGTGGTGATGTCTGAGATTGA 59.531 41.667 0.00 0.00 0.00 2.57
6918 8145 4.622260 TGTGGTGATGTCTGAGATTGAA 57.378 40.909 0.00 0.00 0.00 2.69
6919 8146 5.169992 TGTGGTGATGTCTGAGATTGAAT 57.830 39.130 0.00 0.00 0.00 2.57
6920 8147 4.939439 TGTGGTGATGTCTGAGATTGAATG 59.061 41.667 0.00 0.00 0.00 2.67
6921 8148 5.181009 GTGGTGATGTCTGAGATTGAATGA 58.819 41.667 0.00 0.00 0.00 2.57
6922 8149 5.293814 GTGGTGATGTCTGAGATTGAATGAG 59.706 44.000 0.00 0.00 0.00 2.90
6923 8150 4.272991 GGTGATGTCTGAGATTGAATGAGC 59.727 45.833 0.00 0.00 0.00 4.26
6924 8151 4.874396 GTGATGTCTGAGATTGAATGAGCA 59.126 41.667 0.00 0.00 0.00 4.26
6925 8152 5.006844 GTGATGTCTGAGATTGAATGAGCAG 59.993 44.000 0.00 0.00 0.00 4.24
6926 8153 3.870274 TGTCTGAGATTGAATGAGCAGG 58.130 45.455 0.00 0.00 0.00 4.85
6927 8154 2.613133 GTCTGAGATTGAATGAGCAGGC 59.387 50.000 0.00 0.00 0.00 4.85
6928 8155 1.948145 CTGAGATTGAATGAGCAGGCC 59.052 52.381 0.00 0.00 0.00 5.19
6929 8156 1.282738 TGAGATTGAATGAGCAGGCCA 59.717 47.619 5.01 0.00 0.00 5.36
6930 8157 2.291089 TGAGATTGAATGAGCAGGCCAA 60.291 45.455 5.01 0.00 0.00 4.52
6931 8158 2.756760 GAGATTGAATGAGCAGGCCAAA 59.243 45.455 5.01 0.00 0.00 3.28
6932 8159 2.494870 AGATTGAATGAGCAGGCCAAAC 59.505 45.455 5.01 0.00 0.00 2.93
6933 8160 0.597568 TTGAATGAGCAGGCCAAACG 59.402 50.000 5.01 0.00 0.00 3.60
6934 8161 0.250684 TGAATGAGCAGGCCAAACGA 60.251 50.000 5.01 0.00 0.00 3.85
6935 8162 0.449388 GAATGAGCAGGCCAAACGAG 59.551 55.000 5.01 0.00 0.00 4.18
6936 8163 1.589716 AATGAGCAGGCCAAACGAGC 61.590 55.000 5.01 0.00 0.00 5.03
6937 8164 2.669569 GAGCAGGCCAAACGAGCA 60.670 61.111 5.01 0.00 0.00 4.26
6938 8165 2.203337 AGCAGGCCAAACGAGCAA 60.203 55.556 5.01 0.00 0.00 3.91
6939 8166 2.192608 GAGCAGGCCAAACGAGCAAG 62.193 60.000 5.01 0.00 0.00 4.01
6940 8167 2.260869 GCAGGCCAAACGAGCAAGA 61.261 57.895 5.01 0.00 0.00 3.02
6941 8168 1.576421 CAGGCCAAACGAGCAAGAC 59.424 57.895 5.01 0.00 0.00 3.01
6942 8169 0.886490 CAGGCCAAACGAGCAAGACT 60.886 55.000 5.01 0.00 0.00 3.24
6943 8170 0.179018 AGGCCAAACGAGCAAGACTT 60.179 50.000 5.01 0.00 0.00 3.01
6944 8171 0.668535 GGCCAAACGAGCAAGACTTT 59.331 50.000 0.00 0.00 0.00 2.66
6945 8172 1.067060 GGCCAAACGAGCAAGACTTTT 59.933 47.619 0.00 0.00 0.00 2.27
6946 8173 2.481276 GGCCAAACGAGCAAGACTTTTT 60.481 45.455 0.00 0.00 0.00 1.94
6947 8174 2.535574 GCCAAACGAGCAAGACTTTTTG 59.464 45.455 0.00 3.34 34.05 2.44
6948 8175 3.769536 CCAAACGAGCAAGACTTTTTGT 58.230 40.909 7.97 0.00 33.12 2.83
6949 8176 4.173256 CCAAACGAGCAAGACTTTTTGTT 58.827 39.130 7.97 3.53 33.12 2.83
6950 8177 4.625311 CCAAACGAGCAAGACTTTTTGTTT 59.375 37.500 7.97 8.09 33.12 2.83
6951 8178 5.444481 CCAAACGAGCAAGACTTTTTGTTTG 60.444 40.000 22.03 22.03 42.59 2.93
6952 8179 3.769536 ACGAGCAAGACTTTTTGTTTGG 58.230 40.909 0.00 0.00 29.73 3.28
6953 8180 2.535574 CGAGCAAGACTTTTTGTTTGGC 59.464 45.455 0.00 0.00 0.00 4.52
6954 8181 2.866156 GAGCAAGACTTTTTGTTTGGCC 59.134 45.455 0.00 0.00 0.00 5.36
6955 8182 1.939934 GCAAGACTTTTTGTTTGGCCC 59.060 47.619 0.00 0.00 0.00 5.80
6956 8183 2.419990 GCAAGACTTTTTGTTTGGCCCT 60.420 45.455 0.00 0.00 0.00 5.19
6957 8184 3.197265 CAAGACTTTTTGTTTGGCCCTG 58.803 45.455 0.00 0.00 0.00 4.45
6958 8185 2.745968 AGACTTTTTGTTTGGCCCTGA 58.254 42.857 0.00 0.00 0.00 3.86
6959 8186 3.308401 AGACTTTTTGTTTGGCCCTGAT 58.692 40.909 0.00 0.00 0.00 2.90
6960 8187 3.321968 AGACTTTTTGTTTGGCCCTGATC 59.678 43.478 0.00 0.00 0.00 2.92
6961 8188 2.368548 ACTTTTTGTTTGGCCCTGATCC 59.631 45.455 0.00 0.00 0.00 3.36
6962 8189 2.397044 TTTTGTTTGGCCCTGATCCT 57.603 45.000 0.00 0.00 0.00 3.24
6963 8190 1.631405 TTTGTTTGGCCCTGATCCTG 58.369 50.000 0.00 0.00 0.00 3.86
6964 8191 0.251742 TTGTTTGGCCCTGATCCTGG 60.252 55.000 0.00 0.00 0.00 4.45
6965 8192 1.139498 TGTTTGGCCCTGATCCTGGA 61.139 55.000 0.00 0.00 0.00 3.86
6966 8193 0.039618 GTTTGGCCCTGATCCTGGAA 59.960 55.000 0.00 0.00 0.00 3.53
6967 8194 0.783206 TTTGGCCCTGATCCTGGAAA 59.217 50.000 0.00 0.00 0.00 3.13
6968 8195 1.009997 TTGGCCCTGATCCTGGAAAT 58.990 50.000 0.00 0.00 0.00 2.17
6969 8196 1.905839 TGGCCCTGATCCTGGAAATA 58.094 50.000 0.00 0.00 0.00 1.40
6970 8197 2.431997 TGGCCCTGATCCTGGAAATAT 58.568 47.619 0.00 0.00 0.00 1.28
6971 8198 2.108776 TGGCCCTGATCCTGGAAATATG 59.891 50.000 0.00 0.00 0.00 1.78
6972 8199 2.108952 GGCCCTGATCCTGGAAATATGT 59.891 50.000 0.00 0.00 0.00 2.29
6973 8200 3.437052 GGCCCTGATCCTGGAAATATGTT 60.437 47.826 0.00 0.00 0.00 2.71
6974 8201 3.823304 GCCCTGATCCTGGAAATATGTTC 59.177 47.826 0.00 0.00 0.00 3.18
6975 8202 4.401925 CCCTGATCCTGGAAATATGTTCC 58.598 47.826 0.00 8.79 39.03 3.62
6976 8203 4.141181 CCCTGATCCTGGAAATATGTTCCA 60.141 45.833 0.00 14.66 45.61 3.53
6977 8204 5.458654 CCCTGATCCTGGAAATATGTTCCAT 60.459 44.000 15.38 5.78 46.47 3.41
6978 8205 6.073314 CCTGATCCTGGAAATATGTTCCATT 58.927 40.000 15.38 7.62 46.47 3.16
6979 8206 6.208204 CCTGATCCTGGAAATATGTTCCATTC 59.792 42.308 15.38 13.37 46.47 2.67
6980 8207 6.671605 TGATCCTGGAAATATGTTCCATTCA 58.328 36.000 15.38 14.88 46.47 2.57
6981 8208 7.124721 TGATCCTGGAAATATGTTCCATTCAA 58.875 34.615 15.38 6.45 46.47 2.69
6982 8209 7.618907 TGATCCTGGAAATATGTTCCATTCAAA 59.381 33.333 15.38 4.74 46.47 2.69
6983 8210 7.169158 TCCTGGAAATATGTTCCATTCAAAC 57.831 36.000 15.38 0.00 46.47 2.93
6984 8211 6.154363 TCCTGGAAATATGTTCCATTCAAACC 59.846 38.462 15.38 0.00 46.47 3.27
6985 8212 6.293004 TGGAAATATGTTCCATTCAAACCC 57.707 37.500 12.57 0.00 43.17 4.11
6986 8213 6.022315 TGGAAATATGTTCCATTCAAACCCT 58.978 36.000 12.57 0.00 43.17 4.34
6987 8214 6.070881 TGGAAATATGTTCCATTCAAACCCTG 60.071 38.462 12.57 0.00 43.17 4.45
6988 8215 6.154363 GGAAATATGTTCCATTCAAACCCTGA 59.846 38.462 10.18 0.00 38.45 3.86
6989 8216 7.147672 GGAAATATGTTCCATTCAAACCCTGAT 60.148 37.037 10.18 0.00 38.45 2.90
6990 8217 8.837099 AAATATGTTCCATTCAAACCCTGATA 57.163 30.769 0.00 0.00 32.78 2.15
6991 8218 7.823745 ATATGTTCCATTCAAACCCTGATAC 57.176 36.000 0.00 0.00 32.78 2.24
6992 8219 4.340617 TGTTCCATTCAAACCCTGATACC 58.659 43.478 0.00 0.00 32.78 2.73
6993 8220 4.202620 TGTTCCATTCAAACCCTGATACCA 60.203 41.667 0.00 0.00 32.78 3.25
6994 8221 4.235079 TCCATTCAAACCCTGATACCAG 57.765 45.455 0.00 0.00 40.09 4.00
7011 8238 7.781056 TGATACCAGGGAAAATAATGAAAAGC 58.219 34.615 0.00 0.00 0.00 3.51
7012 8239 7.619302 TGATACCAGGGAAAATAATGAAAAGCT 59.381 33.333 0.00 0.00 0.00 3.74
7013 8240 9.131791 GATACCAGGGAAAATAATGAAAAGCTA 57.868 33.333 0.00 0.00 0.00 3.32
7014 8241 7.790782 ACCAGGGAAAATAATGAAAAGCTAA 57.209 32.000 0.00 0.00 0.00 3.09
7015 8242 8.201242 ACCAGGGAAAATAATGAAAAGCTAAA 57.799 30.769 0.00 0.00 0.00 1.85
7016 8243 8.825774 ACCAGGGAAAATAATGAAAAGCTAAAT 58.174 29.630 0.00 0.00 0.00 1.40
7017 8244 9.101655 CCAGGGAAAATAATGAAAAGCTAAATG 57.898 33.333 0.00 0.00 0.00 2.32
7018 8245 9.874205 CAGGGAAAATAATGAAAAGCTAAATGA 57.126 29.630 0.00 0.00 0.00 2.57
7030 8257 8.796475 TGAAAAGCTAAATGATATGGATAAGGC 58.204 33.333 0.00 0.00 0.00 4.35
7031 8258 8.946797 AAAAGCTAAATGATATGGATAAGGCT 57.053 30.769 0.00 0.00 0.00 4.58
7032 8259 8.946797 AAAGCTAAATGATATGGATAAGGCTT 57.053 30.769 4.58 4.58 36.83 4.35
7046 8273 9.981460 ATGGATAAGGCTTATTTAATTAGGGAG 57.019 33.333 20.12 0.00 0.00 4.30
7047 8274 8.955794 TGGATAAGGCTTATTTAATTAGGGAGT 58.044 33.333 20.12 0.00 0.00 3.85
7048 8275 9.809395 GGATAAGGCTTATTTAATTAGGGAGTT 57.191 33.333 20.12 0.00 0.00 3.01
7051 8278 8.521170 AAGGCTTATTTAATTAGGGAGTTCAC 57.479 34.615 0.00 0.00 0.00 3.18
7052 8279 7.873195 AGGCTTATTTAATTAGGGAGTTCACT 58.127 34.615 0.00 0.00 0.00 3.41
7053 8280 7.775561 AGGCTTATTTAATTAGGGAGTTCACTG 59.224 37.037 0.00 0.00 0.00 3.66
7054 8281 7.773690 GGCTTATTTAATTAGGGAGTTCACTGA 59.226 37.037 0.00 0.00 0.00 3.41
7055 8282 8.831550 GCTTATTTAATTAGGGAGTTCACTGAG 58.168 37.037 0.00 0.00 0.00 3.35
7056 8283 9.331282 CTTATTTAATTAGGGAGTTCACTGAGG 57.669 37.037 0.00 0.00 0.00 3.86
7057 8284 3.636153 AATTAGGGAGTTCACTGAGGC 57.364 47.619 0.00 0.00 0.00 4.70
7058 8285 2.327325 TTAGGGAGTTCACTGAGGCT 57.673 50.000 0.00 0.00 0.00 4.58
7059 8286 1.561643 TAGGGAGTTCACTGAGGCTG 58.438 55.000 0.00 0.00 0.00 4.85
7060 8287 1.197430 AGGGAGTTCACTGAGGCTGG 61.197 60.000 0.00 0.00 0.00 4.85
7061 8288 1.194781 GGGAGTTCACTGAGGCTGGA 61.195 60.000 0.00 0.00 0.00 3.86
7062 8289 0.248843 GGAGTTCACTGAGGCTGGAG 59.751 60.000 0.00 0.00 0.00 3.86
7063 8290 0.972883 GAGTTCACTGAGGCTGGAGT 59.027 55.000 0.00 0.00 0.00 3.85
7064 8291 2.171840 GAGTTCACTGAGGCTGGAGTA 58.828 52.381 0.00 0.00 0.00 2.59
7065 8292 2.563179 GAGTTCACTGAGGCTGGAGTAA 59.437 50.000 0.00 0.00 0.00 2.24
7066 8293 2.972713 AGTTCACTGAGGCTGGAGTAAA 59.027 45.455 0.00 0.00 0.00 2.01
7067 8294 3.391296 AGTTCACTGAGGCTGGAGTAAAA 59.609 43.478 0.00 0.00 0.00 1.52
7068 8295 3.685139 TCACTGAGGCTGGAGTAAAAG 57.315 47.619 0.00 0.00 0.00 2.27
7069 8296 3.239449 TCACTGAGGCTGGAGTAAAAGA 58.761 45.455 0.00 0.00 0.00 2.52
7070 8297 3.840666 TCACTGAGGCTGGAGTAAAAGAT 59.159 43.478 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.786507 TCGACTTTCATCATTGCTTTGTG 58.213 39.130 0.00 0.00 0.00 3.33
164 166 1.407437 CCGAAGAAGGAGGATTGGGTG 60.407 57.143 0.00 0.00 0.00 4.61
193 195 2.012237 CATGCATCTCCTGTGCGAC 58.988 57.895 0.00 0.00 45.37 5.19
196 198 0.746923 TCTGCATGCATCTCCTGTGC 60.747 55.000 22.97 0.00 42.81 4.57
201 203 3.192001 TCACTTTTTCTGCATGCATCTCC 59.808 43.478 22.97 0.00 0.00 3.71
209 211 6.166279 TCTTATCGTCTCACTTTTTCTGCAT 58.834 36.000 0.00 0.00 0.00 3.96
215 217 7.411588 GCGTTACATCTTATCGTCTCACTTTTT 60.412 37.037 0.00 0.00 0.00 1.94
261 263 7.095523 ACGCAATGTTTATCGTAACTTTAGTGT 60.096 33.333 0.00 0.00 33.02 3.55
344 346 0.453782 GTCAAACGGTGGCGTAATGC 60.454 55.000 0.00 0.00 45.38 3.56
357 359 2.604174 CGTGTGGAGCGGGTCAAAC 61.604 63.158 9.66 7.34 0.00 2.93
407 409 2.388735 TGGTAGGTGGTGCTATCTCAG 58.611 52.381 0.00 0.00 0.00 3.35
444 446 1.842720 TAAATACATCCGTCGGTGCG 58.157 50.000 11.88 3.52 0.00 5.34
499 503 0.246635 CCGACTCTAGGTTGTGGGTG 59.753 60.000 0.00 0.00 0.00 4.61
501 505 1.263356 TTCCGACTCTAGGTTGTGGG 58.737 55.000 0.00 0.00 34.09 4.61
504 508 2.824341 ACGATTTCCGACTCTAGGTTGT 59.176 45.455 0.00 0.00 41.76 3.32
508 512 1.938577 TCGACGATTTCCGACTCTAGG 59.061 52.381 0.00 0.00 41.76 3.02
514 518 1.397692 ACTCTCTCGACGATTTCCGAC 59.602 52.381 0.00 0.00 41.76 4.79
525 529 3.764434 ACAAGGCTATTTCACTCTCTCGA 59.236 43.478 0.00 0.00 0.00 4.04
531 535 5.470098 TGAGACAAACAAGGCTATTTCACTC 59.530 40.000 13.86 13.86 0.00 3.51
539 543 4.261994 GGCAATTTGAGACAAACAAGGCTA 60.262 41.667 0.00 0.00 0.00 3.93
546 550 3.096489 TGCAGGCAATTTGAGACAAAC 57.904 42.857 0.00 0.00 0.00 2.93
593 883 5.422214 TCCAAATTGGTAGAGGAGAACTC 57.578 43.478 12.28 0.00 41.74 3.01
608 898 7.339466 ACGCTTATAATCAAGGTTCTCCAAATT 59.661 33.333 0.00 0.00 35.89 1.82
619 910 5.163764 TGTTCTTGCACGCTTATAATCAAGG 60.164 40.000 0.00 0.00 33.68 3.61
646 937 6.587608 GGATTTGCAATTCACCTTTTACAGAG 59.412 38.462 19.83 0.00 0.00 3.35
658 949 3.058293 GTGTCGTCTGGATTTGCAATTCA 60.058 43.478 19.83 9.44 0.00 2.57
659 950 3.492313 GTGTCGTCTGGATTTGCAATTC 58.508 45.455 11.98 11.98 0.00 2.17
665 956 5.621197 TTTTATGGTGTCGTCTGGATTTG 57.379 39.130 0.00 0.00 0.00 2.32
674 965 3.775316 AGAGAGGGATTTTATGGTGTCGT 59.225 43.478 0.00 0.00 0.00 4.34
675 966 4.408182 AGAGAGGGATTTTATGGTGTCG 57.592 45.455 0.00 0.00 0.00 4.35
699 990 2.262915 CTCCAGTGGACGTCAGGC 59.737 66.667 18.91 6.52 0.00 4.85
713 1016 1.593209 TCACGACCGTTTGTGCTCC 60.593 57.895 0.00 0.00 37.08 4.70
720 1023 0.105224 TGATGGTGTCACGACCGTTT 59.895 50.000 0.00 0.00 39.07 3.60
777 1080 3.719144 CGCGTCACGTTTTCCCCC 61.719 66.667 0.00 0.00 36.87 5.40
778 1081 3.719144 CCGCGTCACGTTTTCCCC 61.719 66.667 4.92 0.00 41.42 4.81
779 1082 4.379143 GCCGCGTCACGTTTTCCC 62.379 66.667 4.92 0.00 41.42 3.97
796 1103 2.279517 GCGTCTGGCCCAGATACG 60.280 66.667 18.16 18.03 42.73 3.06
817 1124 0.485543 TGGGTTTTCCTTTCCCCCTC 59.514 55.000 0.00 0.00 40.41 4.30
876 1184 4.537433 ATGGAAGGGCTCGCTCGC 62.537 66.667 0.00 0.00 0.00 5.03
877 1185 2.279784 GATGGAAGGGCTCGCTCG 60.280 66.667 0.00 0.00 0.00 5.03
878 1186 2.110006 GGATGGAAGGGCTCGCTC 59.890 66.667 0.00 0.00 0.00 5.03
952 1260 2.733669 CCTCTGCCTCTGCCTCTGG 61.734 68.421 0.00 0.00 36.33 3.86
1205 1513 2.609339 CCGGATCCTCCTCCTCCA 59.391 66.667 10.75 0.00 33.30 3.86
1254 1562 2.364317 CCCTCGCCCTTCTCCTCA 60.364 66.667 0.00 0.00 0.00 3.86
1307 1615 1.691163 CCTCCTCTTCTTCCTCCTCCC 60.691 61.905 0.00 0.00 0.00 4.30
1317 1628 2.244769 CTCCTCCTCTTCCTCCTCTTCT 59.755 54.545 0.00 0.00 0.00 2.85
1327 1638 2.666317 CTCTTCCTCCTCCTCCTCTTC 58.334 57.143 0.00 0.00 0.00 2.87
1328 1639 1.290732 CCTCTTCCTCCTCCTCCTCTT 59.709 57.143 0.00 0.00 0.00 2.85
1329 1640 0.933700 CCTCTTCCTCCTCCTCCTCT 59.066 60.000 0.00 0.00 0.00 3.69
1392 1703 1.558756 AGAGATGGACAGGGAGCAAAG 59.441 52.381 0.00 0.00 0.00 2.77
1400 1711 1.406065 ATGCGGGAGAGATGGACAGG 61.406 60.000 0.00 0.00 0.00 4.00
1501 1813 5.455849 CACTACTGTTCGGTCAAAGATATCG 59.544 44.000 0.00 0.00 0.00 2.92
1512 1824 3.162666 TGAATCCTCACTACTGTTCGGT 58.837 45.455 0.00 0.00 0.00 4.69
1525 1837 2.093973 TGAGAGAAACGCCTGAATCCTC 60.094 50.000 0.00 0.00 0.00 3.71
1548 1860 1.003718 CCAGAACCCTCCACGAACC 60.004 63.158 0.00 0.00 0.00 3.62
1605 1917 4.553547 GCGAGATAATAACAGCTTTGCAGG 60.554 45.833 0.00 0.00 0.00 4.85
1609 1921 4.024556 CCTGGCGAGATAATAACAGCTTTG 60.025 45.833 0.00 0.00 0.00 2.77
1636 1948 1.084289 GGATAAAGCAGACGCGGTTT 58.916 50.000 12.47 4.53 45.49 3.27
1641 1953 1.440145 GGCAGGGATAAAGCAGACGC 61.440 60.000 0.00 0.00 38.99 5.19
1648 1960 6.278363 CAAGATTTCAATGGCAGGGATAAAG 58.722 40.000 0.00 0.00 0.00 1.85
1681 1993 0.820871 AAGCAAAACCTTTGCCGACA 59.179 45.000 17.99 0.00 45.98 4.35
1712 2024 3.122297 TGTCAAGGCAAATTGAAAAGCG 58.878 40.909 0.00 0.00 40.72 4.68
1761 2077 6.088824 CCATCAACAGATACTTGAGCAAAAC 58.911 40.000 0.00 0.00 31.22 2.43
1794 2111 5.885352 TCAATCAGGAAACAGAACAAACTCA 59.115 36.000 0.00 0.00 0.00 3.41
1946 2263 6.460123 GGCTAACATACAACAAATGCAGCTAT 60.460 38.462 0.00 0.00 36.59 2.97
1948 2265 4.380867 GGCTAACATACAACAAATGCAGCT 60.381 41.667 0.00 0.00 36.59 4.24
1965 2282 2.796227 GCAACTGCAAACGGCTAAC 58.204 52.632 0.00 0.00 45.15 2.34
2089 2406 5.726688 GCATGAAACATCAAAATGCATGAGC 60.727 40.000 0.00 0.00 42.48 4.26
2090 2407 5.350091 TGCATGAAACATCAAAATGCATGAG 59.650 36.000 0.00 0.00 46.32 2.90
2132 2449 6.255237 CACTTAGAATGTCTAGTGCATCAGTG 59.745 42.308 0.00 8.76 29.56 3.66
2135 2452 6.286240 ACACTTAGAATGTCTAGTGCATCA 57.714 37.500 0.00 0.00 34.47 3.07
2155 2472 9.937175 GAGATATTATCCAAGCAGTTAAAACAC 57.063 33.333 0.00 0.00 0.00 3.32
2157 2474 9.120538 TGGAGATATTATCCAAGCAGTTAAAAC 57.879 33.333 7.88 0.00 43.87 2.43
2201 2518 4.948341 TGCTGAGGTGTAAAGTAACTGA 57.052 40.909 0.00 0.00 0.00 3.41
2252 2569 3.070734 CCACAAAATCACCAACCCATTCA 59.929 43.478 0.00 0.00 0.00 2.57
2297 2614 2.584835 ATATGCACCAACACACACCT 57.415 45.000 0.00 0.00 0.00 4.00
2342 2660 4.402155 TGGATATTGCCTTTCCACATGTTC 59.598 41.667 0.00 0.00 34.65 3.18
2372 2690 9.817809 CTTTGCAGTAAGAGGTATACTATTGAA 57.182 33.333 2.25 0.00 32.47 2.69
2407 2725 6.647212 TGATAGCAGAAACACTAATTGTCG 57.353 37.500 0.00 0.00 37.51 4.35
2415 2733 3.012518 GCCACATGATAGCAGAAACACT 58.987 45.455 0.00 0.00 0.00 3.55
2462 2780 6.432936 CACCACCGAATTTATCATTGATCAG 58.567 40.000 1.55 0.00 0.00 2.90
2506 2824 2.039951 ACAGCGGCCCCTACCTAA 59.960 61.111 0.00 0.00 0.00 2.69
2516 2834 1.296056 AAATGTACGACCACAGCGGC 61.296 55.000 0.00 0.00 39.03 6.53
2518 2836 0.442310 CCAAATGTACGACCACAGCG 59.558 55.000 0.00 0.00 0.00 5.18
2519 2837 0.802494 CCCAAATGTACGACCACAGC 59.198 55.000 0.00 0.00 0.00 4.40
2527 2845 1.942657 CATCAGAGCCCCAAATGTACG 59.057 52.381 0.00 0.00 0.00 3.67
2584 2902 8.235905 CGTCCTATATTTAGTTACAGAGGTAGC 58.764 40.741 0.00 0.00 0.00 3.58
2752 3070 7.441458 ACTGGTACTTAAGTCAACATCTTCAAC 59.559 37.037 12.39 0.00 0.00 3.18
2770 3088 1.202604 CCAACCACGTTGACTGGTACT 60.203 52.381 6.09 0.00 45.28 2.73
2772 3090 0.107081 CCCAACCACGTTGACTGGTA 59.893 55.000 6.09 0.00 45.28 3.25
2789 3107 6.232692 TGTAGTAAGACCATGTGTTTAACCC 58.767 40.000 0.00 0.00 0.00 4.11
2790 3108 7.733402 TTGTAGTAAGACCATGTGTTTAACC 57.267 36.000 0.00 0.00 0.00 2.85
2816 3136 7.441458 ACTGAACCTGAGTGTAAACTACAATTC 59.559 37.037 0.00 0.00 40.93 2.17
2822 3142 7.255730 GGAACTACTGAACCTGAGTGTAAACTA 60.256 40.741 0.00 0.00 0.00 2.24
2907 3229 5.964477 AGAGGTATCCCATTAGTGTCTTGAA 59.036 40.000 0.00 0.00 0.00 2.69
2923 3245 7.719871 TTCCACCTATATAAGCAGAGGTATC 57.280 40.000 0.00 0.00 40.41 2.24
3012 3334 5.700402 ACAGCTCCACTATGATAAACCTT 57.300 39.130 0.00 0.00 0.00 3.50
3049 3372 2.816087 GCTCATCAGCAAACTTTCAGGA 59.184 45.455 0.00 0.00 46.06 3.86
3078 3401 8.836413 TGTAAGAACAATAGAAAAGACAACAGG 58.164 33.333 0.00 0.00 30.91 4.00
3111 3434 9.277783 GGAATACAGATCCGTAGTAACTAACTA 57.722 37.037 0.00 0.00 39.80 2.24
3112 3435 7.997803 AGGAATACAGATCCGTAGTAACTAACT 59.002 37.037 0.00 0.00 42.03 2.24
3128 3734 5.011431 CCTATGAGTCATGCAGGAATACAGA 59.989 44.000 16.15 0.36 0.00 3.41
3136 3742 3.548745 TCAACCTATGAGTCATGCAGG 57.451 47.619 16.15 16.75 33.04 4.85
3288 3991 6.017026 GGTATGGCCATTTAGAAAGAGTAAGC 60.017 42.308 26.37 6.64 37.17 3.09
3289 3992 7.054124 TGGTATGGCCATTTAGAAAGAGTAAG 58.946 38.462 26.37 0.00 43.61 2.34
3342 4046 2.669781 CCATCACCCAACCTATGCAAT 58.330 47.619 0.00 0.00 0.00 3.56
3360 4064 0.752054 CACCAGCCTTTTTCTTGCCA 59.248 50.000 0.00 0.00 0.00 4.92
3510 4214 9.573166 TGAAATAAGACAAGGAAGATTCTTGAA 57.427 29.630 3.03 0.00 42.94 2.69
3726 4430 5.714863 AGAGAGAGAGAGAGAGAGAGAGAT 58.285 45.833 0.00 0.00 0.00 2.75
3770 4508 2.420642 CTCATATTCCCCAGATGTGCG 58.579 52.381 0.00 0.00 0.00 5.34
3773 4511 2.421725 TGCCTCATATTCCCCAGATGT 58.578 47.619 0.00 0.00 0.00 3.06
3925 4665 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
3926 4666 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
3927 4667 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
3928 4668 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
3929 4669 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
3930 4670 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
3931 4671 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
3932 4672 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
3933 4673 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
3934 4674 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
3935 4675 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
3936 4676 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
3937 4677 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
3938 4678 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
3939 4679 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
3945 4685 9.298250 AGAGTTAGTACAAAGTTGAGTCATCTA 57.702 33.333 4.14 0.00 0.00 1.98
3946 4686 8.085296 CAGAGTTAGTACAAAGTTGAGTCATCT 58.915 37.037 0.00 0.00 0.00 2.90
3947 4687 7.868415 ACAGAGTTAGTACAAAGTTGAGTCATC 59.132 37.037 0.00 0.00 0.00 2.92
3948 4688 7.727181 ACAGAGTTAGTACAAAGTTGAGTCAT 58.273 34.615 0.00 0.00 0.00 3.06
3949 4689 7.108841 ACAGAGTTAGTACAAAGTTGAGTCA 57.891 36.000 0.00 0.00 0.00 3.41
3950 4690 8.351461 AGTACAGAGTTAGTACAAAGTTGAGTC 58.649 37.037 6.30 0.00 43.24 3.36
3951 4691 8.235359 AGTACAGAGTTAGTACAAAGTTGAGT 57.765 34.615 6.30 0.00 43.24 3.41
3973 4713 8.649591 TGACCCAACATTGTACTAACTTTAGTA 58.350 33.333 4.98 4.98 43.36 1.82
3974 4714 7.511268 TGACCCAACATTGTACTAACTTTAGT 58.489 34.615 6.85 6.85 45.39 2.24
3975 4715 7.972832 TGACCCAACATTGTACTAACTTTAG 57.027 36.000 0.00 0.00 36.82 1.85
3976 4716 8.380099 AGATGACCCAACATTGTACTAACTTTA 58.620 33.333 0.00 0.00 0.00 1.85
3977 4717 7.231467 AGATGACCCAACATTGTACTAACTTT 58.769 34.615 0.00 0.00 0.00 2.66
3978 4718 6.779860 AGATGACCCAACATTGTACTAACTT 58.220 36.000 0.00 0.00 0.00 2.66
3979 4719 6.374417 AGATGACCCAACATTGTACTAACT 57.626 37.500 0.00 0.00 0.00 2.24
3980 4720 8.732746 AATAGATGACCCAACATTGTACTAAC 57.267 34.615 0.00 0.00 0.00 2.34
3981 4721 9.747898 AAAATAGATGACCCAACATTGTACTAA 57.252 29.630 0.00 0.00 0.00 2.24
3982 4722 9.173021 CAAAATAGATGACCCAACATTGTACTA 57.827 33.333 0.00 0.00 0.00 1.82
3983 4723 7.122650 CCAAAATAGATGACCCAACATTGTACT 59.877 37.037 0.00 0.00 0.00 2.73
3984 4724 7.122055 TCCAAAATAGATGACCCAACATTGTAC 59.878 37.037 0.00 0.00 0.00 2.90
3985 4725 7.178573 TCCAAAATAGATGACCCAACATTGTA 58.821 34.615 0.00 0.00 0.00 2.41
3986 4726 6.015918 TCCAAAATAGATGACCCAACATTGT 58.984 36.000 0.00 0.00 0.00 2.71
3987 4727 6.528537 TCCAAAATAGATGACCCAACATTG 57.471 37.500 0.00 0.00 0.00 2.82
3988 4728 6.350110 CGTTCCAAAATAGATGACCCAACATT 60.350 38.462 0.00 0.00 0.00 2.71
3989 4729 5.125417 CGTTCCAAAATAGATGACCCAACAT 59.875 40.000 0.00 0.00 0.00 2.71
3990 4730 4.457603 CGTTCCAAAATAGATGACCCAACA 59.542 41.667 0.00 0.00 0.00 3.33
3991 4731 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
3992 4732 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
3993 4733 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
3994 4734 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
3995 4735 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
3996 4736 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
3997 4737 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
3998 4738 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
3999 4739 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
4000 4740 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
4001 4741 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
4002 4742 6.811634 TTATACTCCCTCCGTTCCAAAATA 57.188 37.500 0.00 0.00 0.00 1.40
4003 4743 5.703730 TTATACTCCCTCCGTTCCAAAAT 57.296 39.130 0.00 0.00 0.00 1.82
4004 4744 5.502089 TTTATACTCCCTCCGTTCCAAAA 57.498 39.130 0.00 0.00 0.00 2.44
4005 4745 5.703730 ATTTATACTCCCTCCGTTCCAAA 57.296 39.130 0.00 0.00 0.00 3.28
4006 4746 5.703730 AATTTATACTCCCTCCGTTCCAA 57.296 39.130 0.00 0.00 0.00 3.53
4007 4747 5.703730 AAATTTATACTCCCTCCGTTCCA 57.296 39.130 0.00 0.00 0.00 3.53
4008 4748 6.484643 GGTTAAATTTATACTCCCTCCGTTCC 59.515 42.308 0.00 0.00 0.00 3.62
4009 4749 6.484643 GGGTTAAATTTATACTCCCTCCGTTC 59.515 42.308 15.14 0.00 0.00 3.95
4010 4750 6.359804 GGGTTAAATTTATACTCCCTCCGTT 58.640 40.000 15.14 0.00 0.00 4.44
4011 4751 5.163163 GGGGTTAAATTTATACTCCCTCCGT 60.163 44.000 18.74 0.00 34.44 4.69
4012 4752 5.163174 TGGGGTTAAATTTATACTCCCTCCG 60.163 44.000 18.75 0.00 31.09 4.63
4013 4753 6.270219 TGGGGTTAAATTTATACTCCCTCC 57.730 41.667 18.75 9.91 31.09 4.30
4014 4754 8.002459 TCAATGGGGTTAAATTTATACTCCCTC 58.998 37.037 18.75 13.08 31.09 4.30
4015 4755 7.889178 TCAATGGGGTTAAATTTATACTCCCT 58.111 34.615 18.75 11.33 31.09 4.20
4016 4756 8.585018 CATCAATGGGGTTAAATTTATACTCCC 58.415 37.037 18.75 18.27 31.09 4.30
4017 4757 8.088365 GCATCAATGGGGTTAAATTTATACTCC 58.912 37.037 16.44 16.44 32.85 3.85
4018 4758 8.860088 AGCATCAATGGGGTTAAATTTATACTC 58.140 33.333 0.00 1.00 0.00 2.59
4019 4759 8.782137 AGCATCAATGGGGTTAAATTTATACT 57.218 30.769 0.00 0.00 0.00 2.12
4049 4789 7.582435 AGTAACAACACATAAGAGAACATCG 57.418 36.000 0.00 0.00 0.00 3.84
4103 4843 2.899900 ACCATGTTCTAGTGCAGTCAGA 59.100 45.455 0.00 0.00 0.00 3.27
4123 4863 4.686972 TCTACAGCTCTGATGCACAATAC 58.313 43.478 3.60 0.00 34.99 1.89
4213 4953 7.949186 ACGACAGTTTTTCTTTGTTCATTTTC 58.051 30.769 0.00 0.00 0.00 2.29
4214 4954 7.883229 ACGACAGTTTTTCTTTGTTCATTTT 57.117 28.000 0.00 0.00 0.00 1.82
4215 4955 7.883229 AACGACAGTTTTTCTTTGTTCATTT 57.117 28.000 0.00 0.00 37.26 2.32
4216 4956 8.973835 TTAACGACAGTTTTTCTTTGTTCATT 57.026 26.923 0.00 0.00 41.49 2.57
4217 4957 9.581099 AATTAACGACAGTTTTTCTTTGTTCAT 57.419 25.926 0.00 0.00 41.49 2.57
4240 4980 8.650143 AACCAGATGATACTTGTACCAAAATT 57.350 30.769 0.00 0.00 0.00 1.82
4337 5270 5.055144 GGCCAACTAAGCTTATACAGTACC 58.945 45.833 6.64 2.81 0.00 3.34
4373 5306 6.238814 CCAACATTTAAGTCCCGTAACAAGTT 60.239 38.462 0.00 0.00 0.00 2.66
4382 5315 2.432444 TCAGCCAACATTTAAGTCCCG 58.568 47.619 0.00 0.00 0.00 5.14
4469 5402 4.112634 TGAAACCAGCTCCACCTTTTAT 57.887 40.909 0.00 0.00 0.00 1.40
4473 5406 1.915141 CATGAAACCAGCTCCACCTT 58.085 50.000 0.00 0.00 0.00 3.50
4488 5421 6.268387 TCAATGGAGTCTACTATGATGCATGA 59.732 38.462 2.46 0.00 0.00 3.07
4528 5491 5.692928 AGGTTAGGTCGACAGTGATACTAT 58.307 41.667 18.91 0.00 0.00 2.12
4529 5492 5.108187 AGGTTAGGTCGACAGTGATACTA 57.892 43.478 18.91 4.64 0.00 1.82
4602 5580 2.297597 CTCTTTGGGTGTCGACTTCTCT 59.702 50.000 17.92 0.00 0.00 3.10
4673 5651 7.614674 GCAGGAAGCTAATCAAATATTTTCG 57.385 36.000 0.00 0.00 41.15 3.46
4701 5679 2.221981 CCTTGCGAGAACAGAAACTCAC 59.778 50.000 1.22 0.00 33.86 3.51
4702 5680 2.158957 ACCTTGCGAGAACAGAAACTCA 60.159 45.455 1.22 0.00 33.86 3.41
4744 5722 2.609002 CACCTTTTTGCTTGTTTCCTGC 59.391 45.455 0.00 0.00 0.00 4.85
4833 5811 0.902984 ACATACTCTCACCGGTGCCA 60.903 55.000 30.25 16.80 0.00 4.92
4869 5847 8.267620 TGATATAATCCCACATTCTCTTCACT 57.732 34.615 0.00 0.00 0.00 3.41
4893 5871 9.774742 GCATTTACCTGTAAGTTATTCTCTTTG 57.225 33.333 0.00 0.00 0.00 2.77
4929 5907 9.831737 GTTATCATGAACAGTAATGCAATATCC 57.168 33.333 0.00 0.00 0.00 2.59
4955 5933 7.416154 AACTGCTTGACATTTCAAATTGATG 57.584 32.000 0.00 0.00 41.34 3.07
4972 5950 8.952278 TCGTATCAACCAATAAATAAACTGCTT 58.048 29.630 0.00 0.00 0.00 3.91
4975 5953 7.849026 CCGTCGTATCAACCAATAAATAAACTG 59.151 37.037 0.00 0.00 0.00 3.16
4976 5954 7.550196 ACCGTCGTATCAACCAATAAATAAACT 59.450 33.333 0.00 0.00 0.00 2.66
4982 5960 5.718146 TGTACCGTCGTATCAACCAATAAA 58.282 37.500 0.00 0.00 0.00 1.40
5043 6033 2.400399 CCGACACAACAATGACTACGT 58.600 47.619 0.00 0.00 0.00 3.57
5045 6035 2.762745 ACCCGACACAACAATGACTAC 58.237 47.619 0.00 0.00 0.00 2.73
5089 6184 2.618241 ACATATGCTACCATGTTTGCCG 59.382 45.455 1.58 0.00 31.32 5.69
5153 6249 7.256908 GGGACTAGGGTAATAAGGCATCATAAA 60.257 40.741 0.00 0.00 0.00 1.40
5271 6376 5.043903 CACTGGGAAACGTGTATCATAGAG 58.956 45.833 0.00 0.00 0.00 2.43
5304 6409 4.572389 CACATACTACCACAAATCTCAGGC 59.428 45.833 0.00 0.00 0.00 4.85
5351 6460 4.459089 GACCCGAGGCTGCAGGAC 62.459 72.222 17.12 0.00 0.00 3.85
5403 6512 8.450578 TCCCAATGATCTGAATTGTACATTAC 57.549 34.615 0.00 0.00 33.93 1.89
5404 6513 9.070179 CATCCCAATGATCTGAATTGTACATTA 57.930 33.333 0.00 0.00 34.61 1.90
5446 6555 8.952278 AGATTATAAACGGCAACATTTCAGTAA 58.048 29.630 0.00 0.00 0.00 2.24
5450 6566 6.033341 GCAGATTATAAACGGCAACATTTCA 58.967 36.000 11.88 0.00 0.00 2.69
5527 6649 2.014128 CAAAATAGTGCCCCGGTACTG 58.986 52.381 14.06 0.00 41.03 2.74
5533 6655 1.253100 AACACCAAAATAGTGCCCCG 58.747 50.000 0.00 0.00 38.87 5.73
5593 6715 4.580167 TGATTTGACTACAAAAGCTGCTGT 59.420 37.500 1.35 0.00 46.77 4.40
5597 6719 8.292448 ACAGTAATGATTTGACTACAAAAGCTG 58.708 33.333 0.00 0.00 46.77 4.24
5620 6742 1.902508 ACAGGAGACACCATACCACAG 59.097 52.381 0.00 0.00 42.04 3.66
5637 6760 9.751542 CTAATGAGGTGGTAAAAGAGTATACAG 57.248 37.037 5.50 0.00 0.00 2.74
5640 6763 8.421784 CAGCTAATGAGGTGGTAAAAGAGTATA 58.578 37.037 0.79 0.00 45.66 1.47
5683 6842 4.473520 CGACCAATGCCGCCTCCT 62.474 66.667 0.00 0.00 0.00 3.69
5715 6874 3.375782 AGAACTGAAAATTGCAGTGCC 57.624 42.857 13.72 3.22 45.27 5.01
5717 6876 9.252962 AGATTTAAAGAACTGAAAATTGCAGTG 57.747 29.630 7.49 0.00 45.27 3.66
5742 6921 3.871594 ACGTCCAAGTTTCTGACAGAAAG 59.128 43.478 27.08 16.94 44.07 2.62
5743 6922 3.869065 ACGTCCAAGTTTCTGACAGAAA 58.131 40.909 23.67 23.67 41.51 2.52
5755 6934 6.445357 AACAATCAAAAGTAACGTCCAAGT 57.555 33.333 0.00 0.00 0.00 3.16
5756 6935 6.970043 TCAAACAATCAAAAGTAACGTCCAAG 59.030 34.615 0.00 0.00 0.00 3.61
5757 6936 6.853720 TCAAACAATCAAAAGTAACGTCCAA 58.146 32.000 0.00 0.00 0.00 3.53
5758 6937 6.438259 TCAAACAATCAAAAGTAACGTCCA 57.562 33.333 0.00 0.00 0.00 4.02
5759 6938 7.924103 ATTCAAACAATCAAAAGTAACGTCC 57.076 32.000 0.00 0.00 0.00 4.79
5760 6939 9.440784 TGTATTCAAACAATCAAAAGTAACGTC 57.559 29.630 0.00 0.00 0.00 4.34
5761 6940 9.959749 ATGTATTCAAACAATCAAAAGTAACGT 57.040 25.926 0.00 0.00 32.02 3.99
5766 6945 8.641541 AGTGGATGTATTCAAACAATCAAAAGT 58.358 29.630 0.00 0.00 32.02 2.66
5771 6950 7.014134 ACAACAGTGGATGTATTCAAACAATCA 59.986 33.333 2.32 0.00 43.00 2.57
5772 6951 7.370383 ACAACAGTGGATGTATTCAAACAATC 58.630 34.615 2.32 0.00 43.00 2.67
5780 6959 4.218417 AGCCAAACAACAGTGGATGTATTC 59.782 41.667 4.49 0.00 43.00 1.75
5781 6960 4.151883 AGCCAAACAACAGTGGATGTATT 58.848 39.130 4.49 0.59 43.00 1.89
5782 6961 3.766545 AGCCAAACAACAGTGGATGTAT 58.233 40.909 4.49 0.00 43.00 2.29
5792 6971 1.403679 CAACTCCGAAGCCAAACAACA 59.596 47.619 0.00 0.00 0.00 3.33
5793 6972 1.864029 GCAACTCCGAAGCCAAACAAC 60.864 52.381 0.00 0.00 0.00 3.32
5794 6973 0.383949 GCAACTCCGAAGCCAAACAA 59.616 50.000 0.00 0.00 0.00 2.83
5810 6989 5.587043 TCTCGAAAACCAAGTTAGAAAGCAA 59.413 36.000 0.00 0.00 0.00 3.91
5813 6992 7.190920 ACATCTCGAAAACCAAGTTAGAAAG 57.809 36.000 0.00 0.00 0.00 2.62
5817 6996 6.539649 TCAACATCTCGAAAACCAAGTTAG 57.460 37.500 0.00 0.00 0.00 2.34
5819 6998 5.828299 TTCAACATCTCGAAAACCAAGTT 57.172 34.783 0.00 0.00 0.00 2.66
5821 7000 6.697019 ACAATTTCAACATCTCGAAAACCAAG 59.303 34.615 0.00 0.00 34.95 3.61
5822 7001 6.568869 ACAATTTCAACATCTCGAAAACCAA 58.431 32.000 0.00 0.00 34.95 3.67
5823 7002 6.142818 ACAATTTCAACATCTCGAAAACCA 57.857 33.333 0.00 0.00 34.95 3.67
5824 7003 6.695278 TGAACAATTTCAACATCTCGAAAACC 59.305 34.615 0.00 0.00 38.87 3.27
5825 7004 7.678194 TGAACAATTTCAACATCTCGAAAAC 57.322 32.000 0.00 0.00 38.87 2.43
5828 7013 6.857451 CACATGAACAATTTCAACATCTCGAA 59.143 34.615 0.00 0.00 45.01 3.71
5831 7016 6.680810 TCCACATGAACAATTTCAACATCTC 58.319 36.000 0.00 0.00 45.01 2.75
5851 7036 8.738645 AGATCAACCATTTCTTACTATTCCAC 57.261 34.615 0.00 0.00 0.00 4.02
5867 7052 5.497464 TGGTGTTCAGATAAGATCAACCA 57.503 39.130 0.00 0.00 0.00 3.67
5877 7062 9.276590 GATTGATACAATCATGGTGTTCAGATA 57.723 33.333 16.34 0.87 39.39 1.98
5880 7065 7.415229 CAGATTGATACAATCATGGTGTTCAG 58.585 38.462 21.15 0.00 39.39 3.02
5886 7071 3.817084 CGGCAGATTGATACAATCATGGT 59.183 43.478 21.15 3.58 39.39 3.55
5888 7073 3.251487 TGCGGCAGATTGATACAATCATG 59.749 43.478 21.15 17.03 39.39 3.07
5894 7079 2.102925 TCTGATGCGGCAGATTGATACA 59.897 45.455 9.25 0.00 39.84 2.29
5895 7080 2.478134 GTCTGATGCGGCAGATTGATAC 59.522 50.000 9.25 0.00 45.75 2.24
5897 7082 1.140452 AGTCTGATGCGGCAGATTGAT 59.860 47.619 9.25 0.00 45.75 2.57
5899 7084 1.376543 AAGTCTGATGCGGCAGATTG 58.623 50.000 9.25 0.00 45.75 2.67
5908 7096 4.083271 GGACACAAAAGGTAAGTCTGATGC 60.083 45.833 0.00 0.00 0.00 3.91
5914 7102 5.449999 CCAACAAGGACACAAAAGGTAAGTC 60.450 44.000 0.00 0.00 41.22 3.01
5921 7109 3.866883 ACACCAACAAGGACACAAAAG 57.133 42.857 0.00 0.00 41.22 2.27
5925 7115 4.158764 CCTTAAAACACCAACAAGGACACA 59.841 41.667 0.00 0.00 41.22 3.72
6140 7338 4.394729 ACATGTTCCACGGTTACAGATTT 58.605 39.130 0.00 0.00 0.00 2.17
6227 7426 7.056635 CACTGAAGACCCTACCATTGATAAAT 58.943 38.462 0.00 0.00 0.00 1.40
6228 7427 6.012858 ACACTGAAGACCCTACCATTGATAAA 60.013 38.462 0.00 0.00 0.00 1.40
6280 7479 2.591923 TGCCACATTTTACTTGCTGGA 58.408 42.857 0.00 0.00 0.00 3.86
6283 7482 3.716601 GTGTTGCCACATTTTACTTGCT 58.283 40.909 0.00 0.00 41.44 3.91
6284 7483 2.470999 CGTGTTGCCACATTTTACTTGC 59.529 45.455 0.00 0.00 41.93 4.01
6289 7491 2.577700 AGGTCGTGTTGCCACATTTTA 58.422 42.857 0.00 0.00 41.93 1.52
6321 7526 1.153107 CCATGGATGGCTTCAGCGA 60.153 57.895 5.56 0.00 41.75 4.93
6322 7527 3.428797 CCATGGATGGCTTCAGCG 58.571 61.111 5.56 0.00 41.75 5.18
6387 7599 4.298332 CATCTTTTCGTCCCCAAAAGTTG 58.702 43.478 6.27 5.13 40.38 3.16
6388 7600 3.320826 CCATCTTTTCGTCCCCAAAAGTT 59.679 43.478 6.27 0.00 40.38 2.66
6397 7609 1.558294 ACCCCTACCATCTTTTCGTCC 59.442 52.381 0.00 0.00 0.00 4.79
6401 7613 4.080299 ACTCATGACCCCTACCATCTTTTC 60.080 45.833 0.00 0.00 0.00 2.29
6411 7623 1.285280 CACCCAACTCATGACCCCTA 58.715 55.000 0.00 0.00 0.00 3.53
6420 7632 0.550914 AAGTGGAAGCACCCAACTCA 59.449 50.000 0.00 0.00 38.06 3.41
6446 7660 0.393537 CCGCAAAGGCAAGAGATCCT 60.394 55.000 0.00 0.00 41.24 3.24
6558 7772 9.449719 ACGAGAACCATGAATTTAATCTACTTT 57.550 29.630 0.00 0.00 0.00 2.66
6637 7854 8.294577 ACGTTTCACCCTTTTAAGTTTGATATC 58.705 33.333 0.00 0.00 0.00 1.63
6685 7903 9.745880 TCTTTTTCGTAGAATGACCATATCTAC 57.254 33.333 14.92 14.92 45.90 2.59
6695 7913 9.489084 TCATCTTCTTTCTTTTTCGTAGAATGA 57.511 29.630 0.00 0.00 45.90 2.57
6697 7915 8.447053 GCTCATCTTCTTTCTTTTTCGTAGAAT 58.553 33.333 0.00 0.00 45.90 2.40
6703 7921 5.388944 CCAGCTCATCTTCTTTCTTTTTCG 58.611 41.667 0.00 0.00 0.00 3.46
6738 7965 8.668510 TTGAAGCCAGTATATTTCAGATCTTC 57.331 34.615 0.00 0.00 31.85 2.87
6741 7968 9.282569 AGAATTGAAGCCAGTATATTTCAGATC 57.717 33.333 0.00 0.00 31.85 2.75
6749 7976 8.985315 TTTCATGAGAATTGAAGCCAGTATAT 57.015 30.769 0.00 0.00 34.76 0.86
6753 7980 5.319453 TCTTTCATGAGAATTGAAGCCAGT 58.681 37.500 0.00 0.00 34.76 4.00
6764 7991 6.957920 TTCAACAACCATCTTTCATGAGAA 57.042 33.333 0.00 0.00 0.00 2.87
6876 8103 4.943705 ACATCTCAACGCATGGATAGTTTT 59.056 37.500 0.00 0.00 0.00 2.43
6877 8104 4.333649 CACATCTCAACGCATGGATAGTTT 59.666 41.667 0.00 0.00 0.00 2.66
6880 8107 2.804527 CCACATCTCAACGCATGGATAG 59.195 50.000 0.00 0.00 0.00 2.08
6881 8108 2.170397 ACCACATCTCAACGCATGGATA 59.830 45.455 0.00 0.00 0.00 2.59
6882 8109 1.065199 ACCACATCTCAACGCATGGAT 60.065 47.619 0.00 0.00 0.00 3.41
6883 8110 0.324614 ACCACATCTCAACGCATGGA 59.675 50.000 0.00 0.00 0.00 3.41
6884 8111 0.448990 CACCACATCTCAACGCATGG 59.551 55.000 0.00 0.00 0.00 3.66
6885 8112 1.441738 TCACCACATCTCAACGCATG 58.558 50.000 0.00 0.00 0.00 4.06
6886 8113 2.011947 CATCACCACATCTCAACGCAT 58.988 47.619 0.00 0.00 0.00 4.73
6887 8114 1.270785 ACATCACCACATCTCAACGCA 60.271 47.619 0.00 0.00 0.00 5.24
6888 8115 1.394917 GACATCACCACATCTCAACGC 59.605 52.381 0.00 0.00 0.00 4.84
6889 8116 2.669924 CAGACATCACCACATCTCAACG 59.330 50.000 0.00 0.00 0.00 4.10
6890 8117 3.930336 TCAGACATCACCACATCTCAAC 58.070 45.455 0.00 0.00 0.00 3.18
6891 8118 3.834231 TCTCAGACATCACCACATCTCAA 59.166 43.478 0.00 0.00 0.00 3.02
6892 8119 3.434309 TCTCAGACATCACCACATCTCA 58.566 45.455 0.00 0.00 0.00 3.27
6893 8120 4.669206 ATCTCAGACATCACCACATCTC 57.331 45.455 0.00 0.00 0.00 2.75
6894 8121 4.468868 TCAATCTCAGACATCACCACATCT 59.531 41.667 0.00 0.00 0.00 2.90
6895 8122 4.763073 TCAATCTCAGACATCACCACATC 58.237 43.478 0.00 0.00 0.00 3.06
6896 8123 4.831674 TCAATCTCAGACATCACCACAT 57.168 40.909 0.00 0.00 0.00 3.21
6897 8124 4.622260 TTCAATCTCAGACATCACCACA 57.378 40.909 0.00 0.00 0.00 4.17
6898 8125 5.181009 TCATTCAATCTCAGACATCACCAC 58.819 41.667 0.00 0.00 0.00 4.16
6899 8126 5.425196 TCATTCAATCTCAGACATCACCA 57.575 39.130 0.00 0.00 0.00 4.17
6900 8127 4.272991 GCTCATTCAATCTCAGACATCACC 59.727 45.833 0.00 0.00 0.00 4.02
6901 8128 4.874396 TGCTCATTCAATCTCAGACATCAC 59.126 41.667 0.00 0.00 0.00 3.06
6902 8129 5.093849 TGCTCATTCAATCTCAGACATCA 57.906 39.130 0.00 0.00 0.00 3.07
6903 8130 4.512198 CCTGCTCATTCAATCTCAGACATC 59.488 45.833 0.00 0.00 0.00 3.06
6904 8131 4.452825 CCTGCTCATTCAATCTCAGACAT 58.547 43.478 0.00 0.00 0.00 3.06
6905 8132 3.870274 CCTGCTCATTCAATCTCAGACA 58.130 45.455 0.00 0.00 0.00 3.41
6906 8133 2.613133 GCCTGCTCATTCAATCTCAGAC 59.387 50.000 0.00 0.00 0.00 3.51
6907 8134 2.421107 GGCCTGCTCATTCAATCTCAGA 60.421 50.000 0.00 0.00 0.00 3.27
6908 8135 1.948145 GGCCTGCTCATTCAATCTCAG 59.052 52.381 0.00 0.00 0.00 3.35
6909 8136 1.282738 TGGCCTGCTCATTCAATCTCA 59.717 47.619 3.32 0.00 0.00 3.27
6910 8137 2.048444 TGGCCTGCTCATTCAATCTC 57.952 50.000 3.32 0.00 0.00 2.75
6911 8138 2.494870 GTTTGGCCTGCTCATTCAATCT 59.505 45.455 3.32 0.00 0.00 2.40
6912 8139 2.733227 CGTTTGGCCTGCTCATTCAATC 60.733 50.000 3.32 0.00 0.00 2.67
6913 8140 1.203052 CGTTTGGCCTGCTCATTCAAT 59.797 47.619 3.32 0.00 0.00 2.57
6914 8141 0.597568 CGTTTGGCCTGCTCATTCAA 59.402 50.000 3.32 0.00 0.00 2.69
6915 8142 0.250684 TCGTTTGGCCTGCTCATTCA 60.251 50.000 3.32 0.00 0.00 2.57
6916 8143 0.449388 CTCGTTTGGCCTGCTCATTC 59.551 55.000 3.32 0.00 0.00 2.67
6917 8144 1.589716 GCTCGTTTGGCCTGCTCATT 61.590 55.000 3.32 0.00 0.00 2.57
6918 8145 2.042831 GCTCGTTTGGCCTGCTCAT 61.043 57.895 3.32 0.00 0.00 2.90
6919 8146 2.669569 GCTCGTTTGGCCTGCTCA 60.670 61.111 3.32 0.00 0.00 4.26
6920 8147 2.192608 CTTGCTCGTTTGGCCTGCTC 62.193 60.000 3.32 0.00 0.00 4.26
6921 8148 2.203337 TTGCTCGTTTGGCCTGCT 60.203 55.556 3.32 0.00 0.00 4.24
6922 8149 2.256461 CTTGCTCGTTTGGCCTGC 59.744 61.111 3.32 0.00 0.00 4.85
6923 8150 0.886490 AGTCTTGCTCGTTTGGCCTG 60.886 55.000 3.32 0.00 0.00 4.85
6924 8151 0.179018 AAGTCTTGCTCGTTTGGCCT 60.179 50.000 3.32 0.00 0.00 5.19
6925 8152 0.668535 AAAGTCTTGCTCGTTTGGCC 59.331 50.000 0.00 0.00 0.00 5.36
6926 8153 2.492019 AAAAGTCTTGCTCGTTTGGC 57.508 45.000 0.00 0.00 0.00 4.52
6927 8154 3.769536 ACAAAAAGTCTTGCTCGTTTGG 58.230 40.909 10.12 0.00 36.88 3.28
6928 8155 5.444481 CCAAACAAAAAGTCTTGCTCGTTTG 60.444 40.000 16.05 16.05 40.84 2.93
6929 8156 4.625311 CCAAACAAAAAGTCTTGCTCGTTT 59.375 37.500 0.00 0.00 0.00 3.60
6930 8157 4.173256 CCAAACAAAAAGTCTTGCTCGTT 58.827 39.130 0.00 0.00 0.00 3.85
6931 8158 3.769536 CCAAACAAAAAGTCTTGCTCGT 58.230 40.909 0.00 0.00 0.00 4.18
6932 8159 2.535574 GCCAAACAAAAAGTCTTGCTCG 59.464 45.455 0.00 0.00 0.00 5.03
6933 8160 2.866156 GGCCAAACAAAAAGTCTTGCTC 59.134 45.455 0.00 0.00 0.00 4.26
6934 8161 2.419990 GGGCCAAACAAAAAGTCTTGCT 60.420 45.455 4.39 0.00 0.00 3.91
6935 8162 1.939934 GGGCCAAACAAAAAGTCTTGC 59.060 47.619 4.39 0.00 0.00 4.01
6936 8163 3.118811 TCAGGGCCAAACAAAAAGTCTTG 60.119 43.478 6.18 0.00 0.00 3.02
6937 8164 3.103742 TCAGGGCCAAACAAAAAGTCTT 58.896 40.909 6.18 0.00 0.00 3.01
6938 8165 2.745968 TCAGGGCCAAACAAAAAGTCT 58.254 42.857 6.18 0.00 0.00 3.24
6939 8166 3.554960 GGATCAGGGCCAAACAAAAAGTC 60.555 47.826 6.18 0.00 0.00 3.01
6940 8167 2.368548 GGATCAGGGCCAAACAAAAAGT 59.631 45.455 6.18 0.00 0.00 2.66
6941 8168 2.634453 AGGATCAGGGCCAAACAAAAAG 59.366 45.455 6.18 0.00 0.00 2.27
6942 8169 2.368221 CAGGATCAGGGCCAAACAAAAA 59.632 45.455 6.18 0.00 0.00 1.94
6943 8170 1.969923 CAGGATCAGGGCCAAACAAAA 59.030 47.619 6.18 0.00 0.00 2.44
6944 8171 1.631405 CAGGATCAGGGCCAAACAAA 58.369 50.000 6.18 0.00 0.00 2.83
6945 8172 0.251742 CCAGGATCAGGGCCAAACAA 60.252 55.000 6.18 0.00 0.00 2.83
6946 8173 1.139498 TCCAGGATCAGGGCCAAACA 61.139 55.000 6.18 0.00 0.00 2.83
6947 8174 0.039618 TTCCAGGATCAGGGCCAAAC 59.960 55.000 6.18 0.00 0.00 2.93
6948 8175 0.783206 TTTCCAGGATCAGGGCCAAA 59.217 50.000 6.18 0.00 0.00 3.28
6949 8176 1.009997 ATTTCCAGGATCAGGGCCAA 58.990 50.000 6.18 0.00 0.00 4.52
6950 8177 1.905839 TATTTCCAGGATCAGGGCCA 58.094 50.000 6.18 0.00 0.00 5.36
6951 8178 2.108952 ACATATTTCCAGGATCAGGGCC 59.891 50.000 0.00 0.00 0.00 5.80
6952 8179 3.515602 ACATATTTCCAGGATCAGGGC 57.484 47.619 0.00 0.00 0.00 5.19
6953 8180 4.141181 TGGAACATATTTCCAGGATCAGGG 60.141 45.833 12.57 0.00 43.17 4.45
6954 8181 5.052693 TGGAACATATTTCCAGGATCAGG 57.947 43.478 12.57 0.00 43.17 3.86
6963 8190 7.147672 ATCAGGGTTTGAATGGAACATATTTCC 60.148 37.037 8.79 8.79 39.92 3.13
6964 8191 7.785033 ATCAGGGTTTGAATGGAACATATTTC 58.215 34.615 0.00 0.00 39.92 2.17
6965 8192 7.738437 ATCAGGGTTTGAATGGAACATATTT 57.262 32.000 0.00 0.00 39.92 1.40
6966 8193 7.287696 GGTATCAGGGTTTGAATGGAACATATT 59.712 37.037 0.00 0.00 39.92 1.28
6967 8194 6.777580 GGTATCAGGGTTTGAATGGAACATAT 59.222 38.462 0.00 0.00 39.92 1.78
6968 8195 6.126409 GGTATCAGGGTTTGAATGGAACATA 58.874 40.000 0.00 0.00 39.92 2.29
6969 8196 4.956075 GGTATCAGGGTTTGAATGGAACAT 59.044 41.667 0.00 0.00 39.92 2.71
6970 8197 4.202620 TGGTATCAGGGTTTGAATGGAACA 60.203 41.667 0.00 0.00 39.77 3.18
6971 8198 4.340617 TGGTATCAGGGTTTGAATGGAAC 58.659 43.478 0.00 0.00 39.77 3.62
6972 8199 4.599041 CTGGTATCAGGGTTTGAATGGAA 58.401 43.478 0.00 0.00 39.77 3.53
6973 8200 4.235079 CTGGTATCAGGGTTTGAATGGA 57.765 45.455 0.00 0.00 39.77 3.41
6985 8212 7.922811 GCTTTTCATTATTTTCCCTGGTATCAG 59.077 37.037 0.00 0.00 40.59 2.90
6986 8213 7.619302 AGCTTTTCATTATTTTCCCTGGTATCA 59.381 33.333 0.00 0.00 0.00 2.15
6987 8214 8.011844 AGCTTTTCATTATTTTCCCTGGTATC 57.988 34.615 0.00 0.00 0.00 2.24
6988 8215 7.978099 AGCTTTTCATTATTTTCCCTGGTAT 57.022 32.000 0.00 0.00 0.00 2.73
6989 8216 8.887264 TTAGCTTTTCATTATTTTCCCTGGTA 57.113 30.769 0.00 0.00 0.00 3.25
6990 8217 7.790782 TTAGCTTTTCATTATTTTCCCTGGT 57.209 32.000 0.00 0.00 0.00 4.00
6991 8218 9.101655 CATTTAGCTTTTCATTATTTTCCCTGG 57.898 33.333 0.00 0.00 0.00 4.45
6992 8219 9.874205 TCATTTAGCTTTTCATTATTTTCCCTG 57.126 29.630 0.00 0.00 0.00 4.45
7004 8231 8.796475 GCCTTATCCATATCATTTAGCTTTTCA 58.204 33.333 0.00 0.00 0.00 2.69
7005 8232 9.018582 AGCCTTATCCATATCATTTAGCTTTTC 57.981 33.333 0.00 0.00 0.00 2.29
7006 8233 8.946797 AGCCTTATCCATATCATTTAGCTTTT 57.053 30.769 0.00 0.00 0.00 2.27
7007 8234 8.946797 AAGCCTTATCCATATCATTTAGCTTT 57.053 30.769 0.00 0.00 32.09 3.51
7020 8247 9.981460 CTCCCTAATTAAATAAGCCTTATCCAT 57.019 33.333 0.00 0.00 0.00 3.41
7021 8248 8.955794 ACTCCCTAATTAAATAAGCCTTATCCA 58.044 33.333 0.00 0.00 0.00 3.41
7022 8249 9.809395 AACTCCCTAATTAAATAAGCCTTATCC 57.191 33.333 0.00 0.00 0.00 2.59
7025 8252 9.623000 GTGAACTCCCTAATTAAATAAGCCTTA 57.377 33.333 0.00 0.00 0.00 2.69
7026 8253 8.336987 AGTGAACTCCCTAATTAAATAAGCCTT 58.663 33.333 0.00 0.00 0.00 4.35
7027 8254 7.775561 CAGTGAACTCCCTAATTAAATAAGCCT 59.224 37.037 0.00 0.00 0.00 4.58
7028 8255 7.773690 TCAGTGAACTCCCTAATTAAATAAGCC 59.226 37.037 0.00 0.00 0.00 4.35
7029 8256 8.732746 TCAGTGAACTCCCTAATTAAATAAGC 57.267 34.615 0.00 0.00 0.00 3.09
7030 8257 9.331282 CCTCAGTGAACTCCCTAATTAAATAAG 57.669 37.037 0.00 0.00 0.00 1.73
7031 8258 7.773690 GCCTCAGTGAACTCCCTAATTAAATAA 59.226 37.037 0.00 0.00 0.00 1.40
7032 8259 7.127339 AGCCTCAGTGAACTCCCTAATTAAATA 59.873 37.037 0.00 0.00 0.00 1.40
7033 8260 6.069381 AGCCTCAGTGAACTCCCTAATTAAAT 60.069 38.462 0.00 0.00 0.00 1.40
7034 8261 5.250774 AGCCTCAGTGAACTCCCTAATTAAA 59.749 40.000 0.00 0.00 0.00 1.52
7035 8262 4.783227 AGCCTCAGTGAACTCCCTAATTAA 59.217 41.667 0.00 0.00 0.00 1.40
7036 8263 4.162320 CAGCCTCAGTGAACTCCCTAATTA 59.838 45.833 0.00 0.00 0.00 1.40
7037 8264 3.054802 CAGCCTCAGTGAACTCCCTAATT 60.055 47.826 0.00 0.00 0.00 1.40
7038 8265 2.503356 CAGCCTCAGTGAACTCCCTAAT 59.497 50.000 0.00 0.00 0.00 1.73
7039 8266 1.902508 CAGCCTCAGTGAACTCCCTAA 59.097 52.381 0.00 0.00 0.00 2.69
7040 8267 1.561643 CAGCCTCAGTGAACTCCCTA 58.438 55.000 0.00 0.00 0.00 3.53
7041 8268 1.197430 CCAGCCTCAGTGAACTCCCT 61.197 60.000 0.00 0.00 0.00 4.20
7042 8269 1.194781 TCCAGCCTCAGTGAACTCCC 61.195 60.000 0.00 0.00 0.00 4.30
7043 8270 0.248843 CTCCAGCCTCAGTGAACTCC 59.751 60.000 0.00 0.00 0.00 3.85
7044 8271 0.972883 ACTCCAGCCTCAGTGAACTC 59.027 55.000 0.00 0.00 0.00 3.01
7045 8272 2.310779 TACTCCAGCCTCAGTGAACT 57.689 50.000 0.00 0.00 0.00 3.01
7046 8273 3.402628 TTTACTCCAGCCTCAGTGAAC 57.597 47.619 0.00 0.00 0.00 3.18
7047 8274 3.646162 TCTTTTACTCCAGCCTCAGTGAA 59.354 43.478 0.00 0.00 0.00 3.18
7048 8275 3.239449 TCTTTTACTCCAGCCTCAGTGA 58.761 45.455 0.00 0.00 0.00 3.41
7049 8276 3.685139 TCTTTTACTCCAGCCTCAGTG 57.315 47.619 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.