Multiple sequence alignment - TraesCS5A01G400200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G400200 chr5A 100.000 4009 0 0 1 4009 593236909 593232901 0.000000e+00 7404.0
1 TraesCS5A01G400200 chr5A 100.000 738 0 0 1 738 596365225 596365962 0.000000e+00 1363.0
2 TraesCS5A01G400200 chr5B 92.674 1911 97 12 965 2871 580734224 580732353 0.000000e+00 2713.0
3 TraesCS5A01G400200 chr5B 87.315 607 50 20 2877 3465 580732186 580731589 0.000000e+00 669.0
4 TraesCS5A01G400200 chr5B 92.547 161 9 2 737 897 580734387 580734230 1.120000e-55 228.0
5 TraesCS5A01G400200 chr5B 76.953 256 39 10 2599 2837 128359305 128359053 1.170000e-25 128.0
6 TraesCS5A01G400200 chr5B 82.353 119 17 4 3890 4007 408457794 408457679 2.550000e-17 100.0
7 TraesCS5A01G400200 chr5B 84.375 96 15 0 3912 4007 119132510 119132605 1.190000e-15 95.3
8 TraesCS5A01G400200 chr5B 87.719 57 6 1 2727 2783 582720771 582720716 9.300000e-07 65.8
9 TraesCS5A01G400200 chr5D 92.316 1835 110 12 737 2547 473473513 473471686 0.000000e+00 2579.0
10 TraesCS5A01G400200 chr5D 91.533 437 27 6 2895 3327 473470730 473470300 9.590000e-166 593.0
11 TraesCS5A01G400200 chr5D 80.392 102 20 0 2728 2829 452839513 452839614 1.190000e-10 78.7
12 TraesCS5A01G400200 chr2D 100.000 739 0 0 1 739 101903276 101902538 0.000000e+00 1365.0
13 TraesCS5A01G400200 chr2D 93.023 43 3 0 2734 2776 4981496 4981454 3.340000e-06 63.9
14 TraesCS5A01G400200 chr7B 100.000 738 0 0 1 738 746350797 746351534 0.000000e+00 1363.0
15 TraesCS5A01G400200 chr7B 98.514 740 9 2 1 738 706774563 706773824 0.000000e+00 1304.0
16 TraesCS5A01G400200 chr7B 93.796 274 17 0 3523 3796 747166962 747167235 2.880000e-111 412.0
17 TraesCS5A01G400200 chr7B 92.806 278 20 0 3521 3798 164593516 164593239 1.740000e-108 403.0
18 TraesCS5A01G400200 chr7B 85.859 99 12 2 2740 2837 692598421 692598324 1.970000e-18 104.0
19 TraesCS5A01G400200 chr7D 99.730 741 2 0 1 741 76724849 76724109 0.000000e+00 1358.0
20 TraesCS5A01G400200 chr2B 98.514 740 10 1 1 739 584808070 584808809 0.000000e+00 1304.0
21 TraesCS5A01G400200 chr2B 98.378 740 11 1 1 739 445105603 445104864 0.000000e+00 1299.0
22 TraesCS5A01G400200 chr2B 93.262 282 19 0 3525 3806 233363471 233363752 2.230000e-112 416.0
23 TraesCS5A01G400200 chr2B 83.193 119 16 4 3890 4007 644551256 644551371 5.480000e-19 106.0
24 TraesCS5A01G400200 chr6A 98.378 740 10 2 1 738 94191259 94190520 0.000000e+00 1299.0
25 TraesCS5A01G400200 chr7A 98.113 742 12 2 1 740 508578598 508579339 0.000000e+00 1291.0
26 TraesCS5A01G400200 chr7A 93.841 276 17 0 3523 3798 6649511 6649236 2.230000e-112 416.0
27 TraesCS5A01G400200 chr7A 91.781 73 6 0 3930 4002 136534247 136534175 7.090000e-18 102.0
28 TraesCS5A01G400200 chr2A 93.885 278 17 0 3521 3798 641966595 641966318 1.720000e-113 420.0
29 TraesCS5A01G400200 chr2A 82.971 276 38 7 3503 3775 265271016 265271285 1.440000e-59 241.0
30 TraesCS5A01G400200 chr2A 85.870 92 12 1 3914 4005 770712323 770712233 3.300000e-16 97.1
31 TraesCS5A01G400200 chr1A 93.141 277 19 0 3522 3798 14428328 14428052 1.340000e-109 407.0
32 TraesCS5A01G400200 chr1A 81.148 122 17 5 3890 4009 28944265 28944382 4.270000e-15 93.5
33 TraesCS5A01G400200 chr4A 93.116 276 19 0 3523 3798 722877844 722878119 4.820000e-109 405.0
34 TraesCS5A01G400200 chr1B 93.116 276 19 0 3523 3798 665064797 665065072 4.820000e-109 405.0
35 TraesCS5A01G400200 chr6B 92.806 278 20 0 3521 3798 14320239 14320516 1.740000e-108 403.0
36 TraesCS5A01G400200 chr6B 89.286 84 7 2 3921 4003 631718195 631718277 1.970000e-18 104.0
37 TraesCS5A01G400200 chr6B 83.036 112 14 5 3890 3999 225313291 225313399 3.300000e-16 97.1
38 TraesCS5A01G400200 chr3B 76.863 255 39 10 2599 2836 572250031 572249780 4.210000e-25 126.0
39 TraesCS5A01G400200 chrUn 85.981 107 11 4 3892 3997 83311277 83311174 1.180000e-20 111.0
40 TraesCS5A01G400200 chr4D 86.869 99 11 2 2740 2837 221433806 221433903 4.240000e-20 110.0
41 TraesCS5A01G400200 chr1D 93.023 43 3 0 2734 2776 68380826 68380868 3.340000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G400200 chr5A 593232901 593236909 4008 True 7404.000000 7404 100.000000 1 4009 1 chr5A.!!$R1 4008
1 TraesCS5A01G400200 chr5A 596365225 596365962 737 False 1363.000000 1363 100.000000 1 738 1 chr5A.!!$F1 737
2 TraesCS5A01G400200 chr5B 580731589 580734387 2798 True 1203.333333 2713 90.845333 737 3465 3 chr5B.!!$R4 2728
3 TraesCS5A01G400200 chr5D 473470300 473473513 3213 True 1586.000000 2579 91.924500 737 3327 2 chr5D.!!$R1 2590
4 TraesCS5A01G400200 chr2D 101902538 101903276 738 True 1365.000000 1365 100.000000 1 739 1 chr2D.!!$R2 738
5 TraesCS5A01G400200 chr7B 746350797 746351534 737 False 1363.000000 1363 100.000000 1 738 1 chr7B.!!$F1 737
6 TraesCS5A01G400200 chr7B 706773824 706774563 739 True 1304.000000 1304 98.514000 1 738 1 chr7B.!!$R3 737
7 TraesCS5A01G400200 chr7D 76724109 76724849 740 True 1358.000000 1358 99.730000 1 741 1 chr7D.!!$R1 740
8 TraesCS5A01G400200 chr2B 584808070 584808809 739 False 1304.000000 1304 98.514000 1 739 1 chr2B.!!$F2 738
9 TraesCS5A01G400200 chr2B 445104864 445105603 739 True 1299.000000 1299 98.378000 1 739 1 chr2B.!!$R1 738
10 TraesCS5A01G400200 chr6A 94190520 94191259 739 True 1299.000000 1299 98.378000 1 738 1 chr6A.!!$R1 737
11 TraesCS5A01G400200 chr7A 508578598 508579339 741 False 1291.000000 1291 98.113000 1 740 1 chr7A.!!$F1 739

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
827 831 1.197721 CATGGCCGACTTGTCAAGTTC 59.802 52.381 19.09 11.28 43.03 3.01 F
1819 1824 0.803768 CAATCCAGGAGACGAGCACG 60.804 60.000 0.76 0.76 45.75 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1990 1995 0.599558 TTCTGTTGCTTGCTGATGCC 59.400 50.0 0.0 0.0 38.71 4.40 R
3477 4332 0.036164 ATGGCACGCTACCTTGTGAA 59.964 50.0 0.0 0.0 38.36 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
785 789 3.476552 GTGTTGTGTTCCTCATCCTTCA 58.523 45.455 0.00 0.00 0.00 3.02
794 798 5.122519 GTTCCTCATCCTTCATTTCTCCTC 58.877 45.833 0.00 0.00 0.00 3.71
811 815 2.578021 TCCTCTCCTTTCCCTTTCATGG 59.422 50.000 0.00 0.00 0.00 3.66
827 831 1.197721 CATGGCCGACTTGTCAAGTTC 59.802 52.381 19.09 11.28 43.03 3.01
831 835 1.947456 GCCGACTTGTCAAGTTCCTTT 59.053 47.619 19.09 0.00 43.03 3.11
840 844 4.340617 TGTCAAGTTCCTTTTCTTGGTGT 58.659 39.130 0.00 0.00 40.67 4.16
843 847 5.013547 TCAAGTTCCTTTTCTTGGTGTTGA 58.986 37.500 0.00 0.00 40.67 3.18
884 888 4.026968 CGAATCAACTCGAAGCAAGATCTC 60.027 45.833 0.00 0.00 41.44 2.75
885 889 4.734398 ATCAACTCGAAGCAAGATCTCT 57.266 40.909 0.00 0.00 0.00 3.10
907 911 7.924947 TCTCTGCTATCTGAAAATATCTGTGTG 59.075 37.037 0.00 0.00 0.00 3.82
911 915 9.049523 TGCTATCTGAAAATATCTGTGTGAATC 57.950 33.333 0.00 0.00 0.00 2.52
934 939 9.927668 AATCATTTTACTGATTTTTCACGGATT 57.072 25.926 0.00 0.00 41.89 3.01
965 970 1.656587 TTCCAGAGGTGTGCATAGGT 58.343 50.000 0.00 0.00 0.00 3.08
969 974 1.556911 CAGAGGTGTGCATAGGTTCCT 59.443 52.381 0.00 0.00 0.00 3.36
984 989 2.095718 GGTTCCTCGTTGTTGCTTGATC 60.096 50.000 0.00 0.00 0.00 2.92
992 997 3.345714 GTTGTTGCTTGATCTAATCGCG 58.654 45.455 0.00 0.00 0.00 5.87
993 998 1.327460 TGTTGCTTGATCTAATCGCGC 59.673 47.619 0.00 0.00 0.00 6.86
1014 1019 2.592861 GCCATGGCCGGAGATGAC 60.593 66.667 27.24 0.00 34.56 3.06
1242 1247 2.179517 CTGCACGACGAGGACTCC 59.820 66.667 0.00 0.00 0.00 3.85
1410 1415 1.671379 GGCCCAGAAAGACGTGTCC 60.671 63.158 0.00 0.00 0.00 4.02
1476 1481 2.587753 TCGGATTTCGATGCCGCC 60.588 61.111 14.10 0.00 43.74 6.13
1480 1485 1.591594 GATTTCGATGCCGCCGAGA 60.592 57.895 0.00 0.00 37.35 4.04
1481 1486 1.552348 GATTTCGATGCCGCCGAGAG 61.552 60.000 0.00 0.00 37.35 3.20
1803 1808 2.676471 GACTGCAACGGCCCCAAT 60.676 61.111 0.00 0.00 40.13 3.16
1817 1822 1.617018 CCCAATCCAGGAGACGAGCA 61.617 60.000 0.00 0.00 0.00 4.26
1819 1824 0.803768 CAATCCAGGAGACGAGCACG 60.804 60.000 0.76 0.76 45.75 5.34
1822 1827 2.049156 CAGGAGACGAGCACGCAA 60.049 61.111 2.62 0.00 43.96 4.85
1913 1918 1.950484 GCTCGGCAGAATGAGGGAAAA 60.950 52.381 0.00 0.00 39.69 2.29
2039 2044 2.206576 GGAGGCAAGAAACACTCCAT 57.793 50.000 4.78 0.00 46.81 3.41
2061 2066 4.411927 TCAGAGAAGTAGGCAGTTCTTCT 58.588 43.478 10.76 10.76 46.72 2.85
2062 2067 4.835615 TCAGAGAAGTAGGCAGTTCTTCTT 59.164 41.667 11.75 0.00 44.94 2.52
2063 2068 5.047660 TCAGAGAAGTAGGCAGTTCTTCTTC 60.048 44.000 11.75 6.57 44.94 2.87
2145 2153 1.270412 GCCATGATCTCCTCTGCTCTG 60.270 57.143 0.00 0.00 0.00 3.35
2185 2193 0.171903 GGTTGCTGCATCCATGTCAC 59.828 55.000 21.74 6.58 0.00 3.67
2211 2219 0.942252 GGTGCTTCCTCGTTTTCGTT 59.058 50.000 0.00 0.00 44.46 3.85
2244 2258 5.773239 TTCTACTGTATAAGCAACGCAAC 57.227 39.130 0.00 0.00 0.00 4.17
2362 2376 2.226437 TGCTGAAACAAGATCGGCTTTC 59.774 45.455 8.61 5.54 46.93 2.62
2367 2381 4.024048 TGAAACAAGATCGGCTTTCTGTTC 60.024 41.667 11.12 0.00 33.60 3.18
2371 2385 2.079925 AGATCGGCTTTCTGTTCTTGC 58.920 47.619 0.00 0.00 0.00 4.01
2397 2411 7.568349 TGTCCTGAAGAAATATTGCAGAGTAT 58.432 34.615 0.00 0.00 0.00 2.12
2478 2506 7.595311 ACTTCTTTTGACCATTTGTTTTCAC 57.405 32.000 0.00 0.00 0.00 3.18
2487 2515 7.206687 TGACCATTTGTTTTCACAGAAATACC 58.793 34.615 0.00 0.00 33.22 2.73
2512 2540 9.816354 CCCGAGAATATTTTTGTCCAAATTAAT 57.184 29.630 0.00 0.00 0.00 1.40
2547 2575 5.688176 GGCGTGTTATGTATTTCTCTCTCTC 59.312 44.000 0.00 0.00 0.00 3.20
2548 2576 6.460399 GGCGTGTTATGTATTTCTCTCTCTCT 60.460 42.308 0.00 0.00 0.00 3.10
2549 2577 6.635239 GCGTGTTATGTATTTCTCTCTCTCTC 59.365 42.308 0.00 0.00 0.00 3.20
2550 2578 7.468084 GCGTGTTATGTATTTCTCTCTCTCTCT 60.468 40.741 0.00 0.00 0.00 3.10
2551 2579 8.067784 CGTGTTATGTATTTCTCTCTCTCTCTC 58.932 40.741 0.00 0.00 0.00 3.20
2552 2580 9.120538 GTGTTATGTATTTCTCTCTCTCTCTCT 57.879 37.037 0.00 0.00 0.00 3.10
2553 2581 9.337396 TGTTATGTATTTCTCTCTCTCTCTCTC 57.663 37.037 0.00 0.00 0.00 3.20
2554 2582 9.561069 GTTATGTATTTCTCTCTCTCTCTCTCT 57.439 37.037 0.00 0.00 0.00 3.10
2555 2583 9.778741 TTATGTATTTCTCTCTCTCTCTCTCTC 57.221 37.037 0.00 0.00 0.00 3.20
2556 2584 7.437713 TGTATTTCTCTCTCTCTCTCTCTCT 57.562 40.000 0.00 0.00 0.00 3.10
2557 2585 7.500992 TGTATTTCTCTCTCTCTCTCTCTCTC 58.499 42.308 0.00 0.00 0.00 3.20
2558 2586 6.821616 ATTTCTCTCTCTCTCTCTCTCTCT 57.178 41.667 0.00 0.00 0.00 3.10
2559 2587 5.860941 TTCTCTCTCTCTCTCTCTCTCTC 57.139 47.826 0.00 0.00 0.00 3.20
2560 2588 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
2561 2589 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2562 2590 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2563 2591 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2564 2592 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2565 2593 5.523588 TCTCTCTCTCTCTCTCTCTCTCTT 58.476 45.833 0.00 0.00 0.00 2.85
2566 2594 5.596361 TCTCTCTCTCTCTCTCTCTCTCTTC 59.404 48.000 0.00 0.00 0.00 2.87
2587 2617 9.393512 CTCTTCTATTCATGGTCTCTTTGATTT 57.606 33.333 0.00 0.00 0.00 2.17
2620 2773 6.930667 TGATTGTAATGTCATGACCATCTG 57.069 37.500 22.85 0.00 0.00 2.90
2628 2781 6.699242 ATGTCATGACCATCTGGATCTTAT 57.301 37.500 22.85 2.19 38.94 1.73
2645 2798 8.966868 TGGATCTTATAGGATTTTGGTTTGTTC 58.033 33.333 0.00 0.00 0.00 3.18
2658 2811 4.068599 TGGTTTGTTCGATAGCATCACAA 58.931 39.130 0.00 0.00 0.00 3.33
2832 3000 9.282247 CTATGAGAATCGTTTGAATCAAAAAGG 57.718 33.333 10.27 3.48 38.61 3.11
2838 3006 3.317150 GTTTGAATCAAAAAGGCCCTCG 58.683 45.455 10.27 0.00 35.03 4.63
2839 3007 2.286365 TGAATCAAAAAGGCCCTCGT 57.714 45.000 0.00 0.00 0.00 4.18
2840 3008 1.885887 TGAATCAAAAAGGCCCTCGTG 59.114 47.619 0.00 0.00 0.00 4.35
2841 3009 0.603065 AATCAAAAAGGCCCTCGTGC 59.397 50.000 0.00 0.00 0.00 5.34
2871 3039 5.649395 ACGTATGCTTGTTACTACTACTCCA 59.351 40.000 0.00 0.00 0.00 3.86
2893 3713 3.880047 ACCACCTTGAATTGCATCATG 57.120 42.857 0.00 0.00 0.00 3.07
2899 3719 3.181479 CCTTGAATTGCATCATGTGGAGG 60.181 47.826 0.00 0.00 0.00 4.30
2916 3736 3.676093 GGAGGACACAAACTCCCTAAAG 58.324 50.000 0.00 0.00 46.01 1.85
3032 3857 2.169352 TCTGTGAAGGGCTAGATGCTTC 59.831 50.000 0.00 0.00 42.39 3.86
3051 3879 5.596361 TGCTTCTTATTGGTTTTGGAGTTGA 59.404 36.000 0.00 0.00 0.00 3.18
3052 3880 6.267471 TGCTTCTTATTGGTTTTGGAGTTGAT 59.733 34.615 0.00 0.00 0.00 2.57
3053 3881 6.587608 GCTTCTTATTGGTTTTGGAGTTGATG 59.412 38.462 0.00 0.00 0.00 3.07
3054 3882 6.588719 TCTTATTGGTTTTGGAGTTGATGG 57.411 37.500 0.00 0.00 0.00 3.51
3055 3883 6.310941 TCTTATTGGTTTTGGAGTTGATGGA 58.689 36.000 0.00 0.00 0.00 3.41
3056 3884 6.953520 TCTTATTGGTTTTGGAGTTGATGGAT 59.046 34.615 0.00 0.00 0.00 3.41
3057 3885 7.454380 TCTTATTGGTTTTGGAGTTGATGGATT 59.546 33.333 0.00 0.00 0.00 3.01
3058 3886 4.870123 TGGTTTTGGAGTTGATGGATTG 57.130 40.909 0.00 0.00 0.00 2.67
3060 3888 3.588955 GTTTTGGAGTTGATGGATTGGC 58.411 45.455 0.00 0.00 0.00 4.52
3061 3889 2.905415 TTGGAGTTGATGGATTGGCT 57.095 45.000 0.00 0.00 0.00 4.75
3062 3890 2.133281 TGGAGTTGATGGATTGGCTG 57.867 50.000 0.00 0.00 0.00 4.85
3097 3925 6.636562 TTTCTTTACCATTGTCGCCTTTTA 57.363 33.333 0.00 0.00 0.00 1.52
3157 3985 2.828877 CCGTTGTGGTGTTCTGTTAGA 58.171 47.619 0.00 0.00 0.00 2.10
3158 3986 2.542595 CCGTTGTGGTGTTCTGTTAGAC 59.457 50.000 0.00 0.00 0.00 2.59
3227 4055 8.902540 TGATGTAATGTTACCAGATTGATACC 57.097 34.615 0.82 0.00 32.72 2.73
3236 4064 7.822334 TGTTACCAGATTGATACCTGTACAAAG 59.178 37.037 0.00 0.00 0.00 2.77
3239 4067 7.458397 ACCAGATTGATACCTGTACAAAGAAA 58.542 34.615 0.00 0.00 0.00 2.52
3241 4069 8.454106 CCAGATTGATACCTGTACAAAGAAAAG 58.546 37.037 0.00 0.00 0.00 2.27
3244 4075 7.739498 TTGATACCTGTACAAAGAAAAGGAC 57.261 36.000 0.00 0.00 0.00 3.85
3249 4080 6.805713 ACCTGTACAAAGAAAAGGACAAATG 58.194 36.000 0.00 0.00 0.00 2.32
3320 4154 6.538742 TCCGAAAACATCTCTGGACATATTTC 59.461 38.462 0.00 0.00 0.00 2.17
3327 4168 6.100859 ACATCTCTGGACATATTTCCATCAGT 59.899 38.462 11.02 4.01 44.97 3.41
3329 4170 7.675161 TCTCTGGACATATTTCCATCAGTAA 57.325 36.000 11.02 0.00 44.97 2.24
3332 4173 8.737168 TCTGGACATATTTCCATCAGTAAAAG 57.263 34.615 11.02 0.00 44.97 2.27
3334 4175 7.638444 TGGACATATTTCCATCAGTAAAAGGA 58.362 34.615 6.50 0.00 41.00 3.36
3343 4184 6.924111 TCCATCAGTAAAAGGAATTTTGCTC 58.076 36.000 1.76 0.00 35.24 4.26
3345 4186 5.722021 TCAGTAAAAGGAATTTTGCTCCC 57.278 39.130 1.76 0.00 35.24 4.30
3348 4189 2.721585 AAAGGAATTTTGCTCCCCCT 57.278 45.000 0.00 0.00 32.95 4.79
3349 4190 2.238084 AAGGAATTTTGCTCCCCCTC 57.762 50.000 0.00 0.00 32.95 4.30
3350 4191 1.084018 AGGAATTTTGCTCCCCCTCA 58.916 50.000 0.00 0.00 32.95 3.86
3351 4192 1.432807 AGGAATTTTGCTCCCCCTCAA 59.567 47.619 0.00 0.00 32.95 3.02
3355 4210 2.999185 TTTTGCTCCCCCTCAAATCT 57.001 45.000 0.00 0.00 32.92 2.40
3356 4211 2.220653 TTTGCTCCCCCTCAAATCTG 57.779 50.000 0.00 0.00 0.00 2.90
3368 4223 6.608808 CCCCCTCAAATCTGAATTAATTGACT 59.391 38.462 5.17 0.00 0.00 3.41
3371 4226 8.404000 CCCTCAAATCTGAATTAATTGACTCAG 58.596 37.037 5.17 6.96 37.28 3.35
3372 4227 7.914346 CCTCAAATCTGAATTAATTGACTCAGC 59.086 37.037 5.17 0.00 36.15 4.26
3373 4228 7.765307 TCAAATCTGAATTAATTGACTCAGCC 58.235 34.615 5.17 0.00 36.15 4.85
3374 4229 7.613022 TCAAATCTGAATTAATTGACTCAGCCT 59.387 33.333 5.17 0.00 36.15 4.58
3375 4230 7.565323 AATCTGAATTAATTGACTCAGCCTC 57.435 36.000 5.17 0.00 36.15 4.70
3376 4231 6.305272 TCTGAATTAATTGACTCAGCCTCT 57.695 37.500 5.17 0.00 36.15 3.69
3377 4232 7.423844 TCTGAATTAATTGACTCAGCCTCTA 57.576 36.000 5.17 0.00 36.15 2.43
3378 4233 7.851228 TCTGAATTAATTGACTCAGCCTCTAA 58.149 34.615 5.17 0.00 36.15 2.10
3379 4234 8.321353 TCTGAATTAATTGACTCAGCCTCTAAA 58.679 33.333 5.17 0.00 36.15 1.85
3380 4235 8.268850 TGAATTAATTGACTCAGCCTCTAAAC 57.731 34.615 5.17 0.00 0.00 2.01
3381 4236 7.882791 TGAATTAATTGACTCAGCCTCTAAACA 59.117 33.333 5.17 0.00 0.00 2.83
3382 4237 7.856145 ATTAATTGACTCAGCCTCTAAACAG 57.144 36.000 0.00 0.00 0.00 3.16
3383 4238 2.751166 TGACTCAGCCTCTAAACAGC 57.249 50.000 0.00 0.00 0.00 4.40
3384 4239 1.970640 TGACTCAGCCTCTAAACAGCA 59.029 47.619 0.00 0.00 0.00 4.41
3385 4240 2.568956 TGACTCAGCCTCTAAACAGCAT 59.431 45.455 0.00 0.00 0.00 3.79
3386 4241 3.769300 TGACTCAGCCTCTAAACAGCATA 59.231 43.478 0.00 0.00 0.00 3.14
3387 4242 4.222810 TGACTCAGCCTCTAAACAGCATAA 59.777 41.667 0.00 0.00 0.00 1.90
3390 4245 5.587844 ACTCAGCCTCTAAACAGCATAAATG 59.412 40.000 0.00 0.00 0.00 2.32
3393 4248 6.538742 TCAGCCTCTAAACAGCATAAATGTAC 59.461 38.462 0.00 0.00 0.00 2.90
3397 4252 7.012327 GCCTCTAAACAGCATAAATGTACATGA 59.988 37.037 9.63 0.77 0.00 3.07
3404 4259 7.259882 ACAGCATAAATGTACATGAACATTGG 58.740 34.615 9.63 0.00 46.72 3.16
3414 4269 6.823182 TGTACATGAACATTGGATAGAGGTTG 59.177 38.462 0.00 0.00 0.00 3.77
3415 4270 6.065976 ACATGAACATTGGATAGAGGTTGA 57.934 37.500 0.00 0.00 0.00 3.18
3416 4271 6.118170 ACATGAACATTGGATAGAGGTTGAG 58.882 40.000 0.00 0.00 0.00 3.02
3418 4273 5.734720 TGAACATTGGATAGAGGTTGAGTC 58.265 41.667 0.00 0.00 0.00 3.36
3427 4282 9.753674 TTGGATAGAGGTTGAGTCAATTAATTT 57.246 29.630 9.18 0.00 0.00 1.82
3459 4314 4.201920 GGGAATAGCACAACTCGGATTTTC 60.202 45.833 0.00 0.00 0.00 2.29
3465 4320 2.157668 CACAACTCGGATTTTCACCTCG 59.842 50.000 0.00 0.00 0.00 4.63
3466 4321 1.732259 CAACTCGGATTTTCACCTCGG 59.268 52.381 0.00 0.00 0.00 4.63
3467 4322 0.391263 ACTCGGATTTTCACCTCGGC 60.391 55.000 0.00 0.00 0.00 5.54
3468 4323 1.078708 TCGGATTTTCACCTCGGCC 60.079 57.895 0.00 0.00 0.00 6.13
3469 4324 2.112815 CGGATTTTCACCTCGGCCC 61.113 63.158 0.00 0.00 0.00 5.80
3470 4325 1.303282 GGATTTTCACCTCGGCCCT 59.697 57.895 0.00 0.00 0.00 5.19
3471 4326 0.748367 GGATTTTCACCTCGGCCCTC 60.748 60.000 0.00 0.00 0.00 4.30
3472 4327 0.035439 GATTTTCACCTCGGCCCTCA 60.035 55.000 0.00 0.00 0.00 3.86
3473 4328 0.322546 ATTTTCACCTCGGCCCTCAC 60.323 55.000 0.00 0.00 0.00 3.51
3474 4329 1.701031 TTTTCACCTCGGCCCTCACA 61.701 55.000 0.00 0.00 0.00 3.58
3475 4330 2.111999 TTTCACCTCGGCCCTCACAG 62.112 60.000 0.00 0.00 0.00 3.66
3476 4331 4.767255 CACCTCGGCCCTCACAGC 62.767 72.222 0.00 0.00 0.00 4.40
3478 4333 3.710722 CCTCGGCCCTCACAGCTT 61.711 66.667 0.00 0.00 0.00 3.74
3479 4334 2.125350 CTCGGCCCTCACAGCTTC 60.125 66.667 0.00 0.00 0.00 3.86
3480 4335 2.922503 TCGGCCCTCACAGCTTCA 60.923 61.111 0.00 0.00 0.00 3.02
3481 4336 2.743928 CGGCCCTCACAGCTTCAC 60.744 66.667 0.00 0.00 0.00 3.18
3482 4337 2.431683 GGCCCTCACAGCTTCACA 59.568 61.111 0.00 0.00 0.00 3.58
3483 4338 1.228245 GGCCCTCACAGCTTCACAA 60.228 57.895 0.00 0.00 0.00 3.33
3484 4339 1.239968 GGCCCTCACAGCTTCACAAG 61.240 60.000 0.00 0.00 0.00 3.16
3485 4340 1.239968 GCCCTCACAGCTTCACAAGG 61.240 60.000 0.00 0.00 0.00 3.61
3486 4341 0.109342 CCCTCACAGCTTCACAAGGT 59.891 55.000 0.00 0.00 40.45 3.50
3487 4342 1.347707 CCCTCACAGCTTCACAAGGTA 59.652 52.381 0.00 0.00 37.49 3.08
3488 4343 2.613977 CCCTCACAGCTTCACAAGGTAG 60.614 54.545 0.00 0.00 37.49 3.18
3489 4344 2.072298 CTCACAGCTTCACAAGGTAGC 58.928 52.381 0.00 0.00 37.49 3.58
3490 4345 0.792640 CACAGCTTCACAAGGTAGCG 59.207 55.000 0.00 0.00 39.82 4.26
3491 4346 0.393077 ACAGCTTCACAAGGTAGCGT 59.607 50.000 0.00 0.00 39.82 5.07
3492 4347 0.792640 CAGCTTCACAAGGTAGCGTG 59.207 55.000 6.30 6.30 39.82 5.34
3493 4348 0.951040 AGCTTCACAAGGTAGCGTGC 60.951 55.000 7.80 0.00 39.82 5.34
3494 4349 1.912371 GCTTCACAAGGTAGCGTGCC 61.912 60.000 7.80 0.00 33.03 5.01
3495 4350 0.602638 CTTCACAAGGTAGCGTGCCA 60.603 55.000 7.80 0.00 33.03 4.92
3496 4351 0.036164 TTCACAAGGTAGCGTGCCAT 59.964 50.000 7.80 0.00 33.03 4.40
3497 4352 0.036164 TCACAAGGTAGCGTGCCATT 59.964 50.000 7.80 0.00 33.03 3.16
3498 4353 0.168788 CACAAGGTAGCGTGCCATTG 59.831 55.000 7.80 0.00 0.00 2.82
3499 4354 0.960364 ACAAGGTAGCGTGCCATTGG 60.960 55.000 7.80 0.00 0.00 3.16
3500 4355 1.378514 AAGGTAGCGTGCCATTGGG 60.379 57.895 4.53 0.00 37.18 4.12
3501 4356 2.045340 GGTAGCGTGCCATTGGGT 60.045 61.111 4.53 0.00 36.17 4.51
3502 4357 1.677633 GGTAGCGTGCCATTGGGTT 60.678 57.895 4.53 0.00 36.17 4.11
3503 4358 1.506262 GTAGCGTGCCATTGGGTTG 59.494 57.895 4.53 0.00 36.17 3.77
3504 4359 1.677300 TAGCGTGCCATTGGGTTGG 60.677 57.895 4.53 0.00 39.94 3.77
3505 4360 2.419011 TAGCGTGCCATTGGGTTGGT 62.419 55.000 4.53 0.00 39.11 3.67
3506 4361 2.650196 CGTGCCATTGGGTTGGTG 59.350 61.111 4.53 0.00 39.11 4.17
3507 4362 2.343387 GTGCCATTGGGTTGGTGC 59.657 61.111 4.53 0.00 39.11 5.01
3508 4363 3.301554 TGCCATTGGGTTGGTGCG 61.302 61.111 4.53 0.00 39.11 5.34
3509 4364 2.988684 GCCATTGGGTTGGTGCGA 60.989 61.111 4.53 0.00 39.11 5.10
3510 4365 2.993471 GCCATTGGGTTGGTGCGAG 61.993 63.158 4.53 0.00 39.11 5.03
3511 4366 2.568090 CATTGGGTTGGTGCGAGC 59.432 61.111 0.00 0.00 0.00 5.03
3512 4367 2.115052 ATTGGGTTGGTGCGAGCA 59.885 55.556 0.00 0.00 0.00 4.26
3513 4368 1.304381 ATTGGGTTGGTGCGAGCAT 60.304 52.632 0.00 0.00 0.00 3.79
3514 4369 0.899717 ATTGGGTTGGTGCGAGCATT 60.900 50.000 0.00 0.00 0.00 3.56
3515 4370 1.112315 TTGGGTTGGTGCGAGCATTT 61.112 50.000 0.00 0.00 0.00 2.32
3516 4371 1.212751 GGGTTGGTGCGAGCATTTC 59.787 57.895 0.00 0.00 0.00 2.17
3517 4372 1.523154 GGGTTGGTGCGAGCATTTCA 61.523 55.000 0.00 0.00 0.00 2.69
3518 4373 0.387239 GGTTGGTGCGAGCATTTCAC 60.387 55.000 0.00 0.00 0.00 3.18
3519 4374 0.310543 GTTGGTGCGAGCATTTCACA 59.689 50.000 0.00 0.00 32.69 3.58
3520 4375 1.068333 GTTGGTGCGAGCATTTCACAT 60.068 47.619 0.00 0.00 32.69 3.21
3521 4376 1.246649 TGGTGCGAGCATTTCACATT 58.753 45.000 0.00 0.00 32.69 2.71
3522 4377 1.612950 TGGTGCGAGCATTTCACATTT 59.387 42.857 0.00 0.00 32.69 2.32
3523 4378 2.035704 TGGTGCGAGCATTTCACATTTT 59.964 40.909 0.00 0.00 32.69 1.82
3524 4379 3.254411 TGGTGCGAGCATTTCACATTTTA 59.746 39.130 0.00 0.00 32.69 1.52
3525 4380 3.853671 GGTGCGAGCATTTCACATTTTAG 59.146 43.478 0.00 0.00 32.69 1.85
3526 4381 3.853671 GTGCGAGCATTTCACATTTTAGG 59.146 43.478 0.00 0.00 0.00 2.69
3527 4382 2.854185 GCGAGCATTTCACATTTTAGGC 59.146 45.455 0.00 0.00 0.00 3.93
3528 4383 3.428045 GCGAGCATTTCACATTTTAGGCT 60.428 43.478 0.00 0.00 0.00 4.58
3529 4384 4.100529 CGAGCATTTCACATTTTAGGCTG 58.899 43.478 0.00 0.00 0.00 4.85
3530 4385 4.427312 GAGCATTTCACATTTTAGGCTGG 58.573 43.478 0.00 0.00 0.00 4.85
3531 4386 3.834231 AGCATTTCACATTTTAGGCTGGT 59.166 39.130 0.00 0.00 0.00 4.00
3532 4387 4.284234 AGCATTTCACATTTTAGGCTGGTT 59.716 37.500 0.00 0.00 0.00 3.67
3533 4388 4.389687 GCATTTCACATTTTAGGCTGGTTG 59.610 41.667 0.00 0.00 0.00 3.77
3534 4389 5.540911 CATTTCACATTTTAGGCTGGTTGT 58.459 37.500 0.00 0.00 0.00 3.32
3535 4390 6.686630 CATTTCACATTTTAGGCTGGTTGTA 58.313 36.000 0.00 0.00 0.00 2.41
3536 4391 6.716934 TTTCACATTTTAGGCTGGTTGTAA 57.283 33.333 0.00 0.00 0.00 2.41
3537 4392 6.909550 TTCACATTTTAGGCTGGTTGTAAT 57.090 33.333 0.00 0.00 0.00 1.89
3538 4393 6.266168 TCACATTTTAGGCTGGTTGTAATG 57.734 37.500 0.00 0.92 0.00 1.90
3539 4394 6.007076 TCACATTTTAGGCTGGTTGTAATGA 58.993 36.000 0.00 0.00 0.00 2.57
3540 4395 6.150976 TCACATTTTAGGCTGGTTGTAATGAG 59.849 38.462 0.00 0.00 0.00 2.90
3541 4396 5.418840 ACATTTTAGGCTGGTTGTAATGAGG 59.581 40.000 0.00 0.00 0.00 3.86
3542 4397 4.919774 TTTAGGCTGGTTGTAATGAGGA 57.080 40.909 0.00 0.00 0.00 3.71
3543 4398 4.487714 TTAGGCTGGTTGTAATGAGGAG 57.512 45.455 0.00 0.00 0.00 3.69
3544 4399 2.269940 AGGCTGGTTGTAATGAGGAGT 58.730 47.619 0.00 0.00 0.00 3.85
3545 4400 3.450904 AGGCTGGTTGTAATGAGGAGTA 58.549 45.455 0.00 0.00 0.00 2.59
3546 4401 4.040755 AGGCTGGTTGTAATGAGGAGTAT 58.959 43.478 0.00 0.00 0.00 2.12
3547 4402 4.101741 AGGCTGGTTGTAATGAGGAGTATC 59.898 45.833 0.00 0.00 0.00 2.24
3548 4403 4.141711 GGCTGGTTGTAATGAGGAGTATCA 60.142 45.833 0.00 0.00 36.25 2.15
3549 4404 5.455326 GGCTGGTTGTAATGAGGAGTATCAT 60.455 44.000 0.00 0.00 41.72 2.45
3550 4405 6.239600 GGCTGGTTGTAATGAGGAGTATCATA 60.240 42.308 0.00 0.00 39.00 2.15
3551 4406 7.390027 GCTGGTTGTAATGAGGAGTATCATAT 58.610 38.462 0.00 0.00 39.00 1.78
3552 4407 8.531982 GCTGGTTGTAATGAGGAGTATCATATA 58.468 37.037 0.00 0.00 39.00 0.86
3553 4408 9.862371 CTGGTTGTAATGAGGAGTATCATATAC 57.138 37.037 0.00 0.00 39.00 1.47
3554 4409 9.601810 TGGTTGTAATGAGGAGTATCATATACT 57.398 33.333 0.00 0.00 39.00 2.12
3600 4455 8.299990 AGTGTATGATACTATCTCCCTAATGC 57.700 38.462 4.03 0.00 0.00 3.56
3601 4456 7.895962 AGTGTATGATACTATCTCCCTAATGCA 59.104 37.037 4.03 0.00 0.00 3.96
3602 4457 8.700051 GTGTATGATACTATCTCCCTAATGCAT 58.300 37.037 4.03 0.00 0.00 3.96
3603 4458 9.936329 TGTATGATACTATCTCCCTAATGCATA 57.064 33.333 0.00 0.00 0.00 3.14
3668 4523 9.495572 TCATACATGACACAAAGTAACATAACA 57.504 29.630 0.00 0.00 0.00 2.41
3706 4561 9.696572 ACGGTATCATGATATAATACTACACCT 57.303 33.333 18.18 2.02 0.00 4.00
3726 4581 7.597386 ACACCTTCTCTTTCTTCATTTAATGC 58.403 34.615 0.00 0.00 0.00 3.56
3727 4582 7.449704 ACACCTTCTCTTTCTTCATTTAATGCT 59.550 33.333 0.00 0.00 0.00 3.79
3728 4583 8.950210 CACCTTCTCTTTCTTCATTTAATGCTA 58.050 33.333 0.00 0.00 0.00 3.49
3729 4584 9.692325 ACCTTCTCTTTCTTCATTTAATGCTAT 57.308 29.630 0.00 0.00 0.00 2.97
3749 4604 9.918630 ATGCTATAACATCTCATTAAAATTGCC 57.081 29.630 0.00 0.00 0.00 4.52
3750 4605 9.135189 TGCTATAACATCTCATTAAAATTGCCT 57.865 29.630 0.00 0.00 0.00 4.75
3756 4611 7.775120 ACATCTCATTAAAATTGCCTAGTTGG 58.225 34.615 0.00 0.00 39.35 3.77
3757 4612 7.615365 ACATCTCATTAAAATTGCCTAGTTGGA 59.385 33.333 0.00 0.00 38.35 3.53
3758 4613 8.469200 CATCTCATTAAAATTGCCTAGTTGGAA 58.531 33.333 0.00 0.00 38.35 3.53
3759 4614 8.593945 TCTCATTAAAATTGCCTAGTTGGAAT 57.406 30.769 0.00 0.00 38.35 3.01
3760 4615 8.469200 TCTCATTAAAATTGCCTAGTTGGAATG 58.531 33.333 0.00 0.00 38.35 2.67
3761 4616 7.041107 TCATTAAAATTGCCTAGTTGGAATGC 58.959 34.615 0.00 0.00 38.35 3.56
3762 4617 4.888326 AAAATTGCCTAGTTGGAATGCA 57.112 36.364 0.00 0.00 38.35 3.96
3763 4618 5.425196 AAAATTGCCTAGTTGGAATGCAT 57.575 34.783 0.00 0.00 38.35 3.96
3764 4619 4.395959 AATTGCCTAGTTGGAATGCATG 57.604 40.909 0.00 0.00 38.35 4.06
3765 4620 2.804986 TGCCTAGTTGGAATGCATGA 57.195 45.000 0.00 0.00 38.35 3.07
3766 4621 3.301794 TGCCTAGTTGGAATGCATGAT 57.698 42.857 0.00 0.00 38.35 2.45
3767 4622 4.436113 TGCCTAGTTGGAATGCATGATA 57.564 40.909 0.00 0.00 38.35 2.15
3768 4623 4.136796 TGCCTAGTTGGAATGCATGATAC 58.863 43.478 0.00 0.00 38.35 2.24
3769 4624 4.141413 TGCCTAGTTGGAATGCATGATACT 60.141 41.667 0.00 4.67 38.35 2.12
3770 4625 5.071653 TGCCTAGTTGGAATGCATGATACTA 59.928 40.000 0.00 5.60 38.35 1.82
3771 4626 5.997746 GCCTAGTTGGAATGCATGATACTAA 59.002 40.000 0.00 0.00 38.35 2.24
3772 4627 6.073003 GCCTAGTTGGAATGCATGATACTAAC 60.073 42.308 0.00 7.19 38.35 2.34
3773 4628 7.220030 CCTAGTTGGAATGCATGATACTAACT 58.780 38.462 19.76 19.76 38.35 2.24
3774 4629 8.367911 CCTAGTTGGAATGCATGATACTAACTA 58.632 37.037 19.83 19.83 38.35 2.24
3775 4630 9.935241 CTAGTTGGAATGCATGATACTAACTAT 57.065 33.333 20.57 9.24 35.34 2.12
3776 4631 8.613060 AGTTGGAATGCATGATACTAACTATG 57.387 34.615 16.80 0.00 32.36 2.23
3777 4632 8.432013 AGTTGGAATGCATGATACTAACTATGA 58.568 33.333 16.80 0.00 32.36 2.15
3778 4633 9.224267 GTTGGAATGCATGATACTAACTATGAT 57.776 33.333 0.00 0.00 0.00 2.45
3780 4635 9.875691 TGGAATGCATGATACTAACTATGATAC 57.124 33.333 0.00 0.00 0.00 2.24
3785 4640 9.528489 TGCATGATACTAACTATGATACTACCA 57.472 33.333 0.00 0.00 0.00 3.25
3796 4651 7.442656 ACTATGATACTACCATTACAACCAGC 58.557 38.462 0.00 0.00 0.00 4.85
3797 4652 5.031066 TGATACTACCATTACAACCAGCC 57.969 43.478 0.00 0.00 0.00 4.85
3798 4653 4.471747 TGATACTACCATTACAACCAGCCA 59.528 41.667 0.00 0.00 0.00 4.75
3799 4654 3.350219 ACTACCATTACAACCAGCCAG 57.650 47.619 0.00 0.00 0.00 4.85
3800 4655 2.910319 ACTACCATTACAACCAGCCAGA 59.090 45.455 0.00 0.00 0.00 3.86
3801 4656 2.496899 ACCATTACAACCAGCCAGAG 57.503 50.000 0.00 0.00 0.00 3.35
3802 4657 1.705186 ACCATTACAACCAGCCAGAGT 59.295 47.619 0.00 0.00 0.00 3.24
3803 4658 2.910319 ACCATTACAACCAGCCAGAGTA 59.090 45.455 0.00 0.00 0.00 2.59
3804 4659 3.523564 ACCATTACAACCAGCCAGAGTAT 59.476 43.478 0.00 0.00 0.00 2.12
3805 4660 4.018415 ACCATTACAACCAGCCAGAGTATT 60.018 41.667 0.00 0.00 0.00 1.89
3806 4661 4.949856 CCATTACAACCAGCCAGAGTATTT 59.050 41.667 0.00 0.00 0.00 1.40
3807 4662 6.119536 CCATTACAACCAGCCAGAGTATTTA 58.880 40.000 0.00 0.00 0.00 1.40
3808 4663 6.772716 CCATTACAACCAGCCAGAGTATTTAT 59.227 38.462 0.00 0.00 0.00 1.40
3809 4664 7.285401 CCATTACAACCAGCCAGAGTATTTATT 59.715 37.037 0.00 0.00 0.00 1.40
3810 4665 8.686334 CATTACAACCAGCCAGAGTATTTATTT 58.314 33.333 0.00 0.00 0.00 1.40
3811 4666 8.644374 TTACAACCAGCCAGAGTATTTATTTT 57.356 30.769 0.00 0.00 0.00 1.82
3812 4667 9.742144 TTACAACCAGCCAGAGTATTTATTTTA 57.258 29.630 0.00 0.00 0.00 1.52
3813 4668 8.281212 ACAACCAGCCAGAGTATTTATTTTAG 57.719 34.615 0.00 0.00 0.00 1.85
3814 4669 8.107095 ACAACCAGCCAGAGTATTTATTTTAGA 58.893 33.333 0.00 0.00 0.00 2.10
3815 4670 8.956426 CAACCAGCCAGAGTATTTATTTTAGAA 58.044 33.333 0.00 0.00 0.00 2.10
3816 4671 9.700831 AACCAGCCAGAGTATTTATTTTAGAAT 57.299 29.630 0.00 0.00 0.00 2.40
3817 4672 9.700831 ACCAGCCAGAGTATTTATTTTAGAATT 57.299 29.630 0.00 0.00 0.00 2.17
3845 4700 6.986817 AGTATAACTGATCCAACTGTATGTGC 59.013 38.462 0.00 0.00 0.00 4.57
3846 4701 2.621338 ACTGATCCAACTGTATGTGCG 58.379 47.619 0.00 0.00 0.00 5.34
3847 4702 2.028112 ACTGATCCAACTGTATGTGCGT 60.028 45.455 0.00 0.00 0.00 5.24
3848 4703 3.194755 ACTGATCCAACTGTATGTGCGTA 59.805 43.478 0.00 0.00 0.00 4.42
3849 4704 3.517602 TGATCCAACTGTATGTGCGTAC 58.482 45.455 0.00 0.00 0.00 3.67
3850 4705 1.985334 TCCAACTGTATGTGCGTACG 58.015 50.000 11.84 11.84 0.00 3.67
3851 4706 0.996462 CCAACTGTATGTGCGTACGG 59.004 55.000 18.39 8.41 37.07 4.02
3852 4707 1.670674 CCAACTGTATGTGCGTACGGT 60.671 52.381 18.39 9.53 44.04 4.83
3853 4708 2.415759 CCAACTGTATGTGCGTACGGTA 60.416 50.000 18.39 0.00 41.96 4.02
3854 4709 2.549633 ACTGTATGTGCGTACGGTAC 57.450 50.000 18.39 8.25 41.22 3.34
3872 4727 5.571778 GGTACGAGTGTTTGTTTCTGTAG 57.428 43.478 0.00 0.00 0.00 2.74
3873 4728 5.045872 GGTACGAGTGTTTGTTTCTGTAGT 58.954 41.667 0.00 0.00 0.00 2.73
3874 4729 5.051240 GGTACGAGTGTTTGTTTCTGTAGTG 60.051 44.000 0.00 0.00 0.00 2.74
3875 4730 4.501071 ACGAGTGTTTGTTTCTGTAGTGT 58.499 39.130 0.00 0.00 0.00 3.55
3876 4731 4.328983 ACGAGTGTTTGTTTCTGTAGTGTG 59.671 41.667 0.00 0.00 0.00 3.82
3877 4732 4.328983 CGAGTGTTTGTTTCTGTAGTGTGT 59.671 41.667 0.00 0.00 0.00 3.72
3878 4733 5.163893 CGAGTGTTTGTTTCTGTAGTGTGTT 60.164 40.000 0.00 0.00 0.00 3.32
3879 4734 6.035220 CGAGTGTTTGTTTCTGTAGTGTGTTA 59.965 38.462 0.00 0.00 0.00 2.41
3880 4735 7.412129 CGAGTGTTTGTTTCTGTAGTGTGTTAA 60.412 37.037 0.00 0.00 0.00 2.01
3881 4736 8.101654 AGTGTTTGTTTCTGTAGTGTGTTAAA 57.898 30.769 0.00 0.00 0.00 1.52
3882 4737 8.569641 AGTGTTTGTTTCTGTAGTGTGTTAAAA 58.430 29.630 0.00 0.00 0.00 1.52
3883 4738 9.182933 GTGTTTGTTTCTGTAGTGTGTTAAAAA 57.817 29.630 0.00 0.00 0.00 1.94
3951 4806 4.848562 TTTTTGTCGAGAGCTACTCAGA 57.151 40.909 11.93 8.07 45.14 3.27
3952 4807 5.392767 TTTTTGTCGAGAGCTACTCAGAT 57.607 39.130 11.93 0.00 45.14 2.90
3953 4808 4.362932 TTTGTCGAGAGCTACTCAGATG 57.637 45.455 11.93 0.00 45.14 2.90
3954 4809 2.992593 TGTCGAGAGCTACTCAGATGT 58.007 47.619 11.93 0.00 45.14 3.06
3955 4810 2.939756 TGTCGAGAGCTACTCAGATGTC 59.060 50.000 11.93 0.00 45.14 3.06
3956 4811 2.289547 GTCGAGAGCTACTCAGATGTCC 59.710 54.545 11.93 0.00 45.14 4.02
3957 4812 2.092914 TCGAGAGCTACTCAGATGTCCA 60.093 50.000 11.93 0.00 45.14 4.02
3958 4813 2.685388 CGAGAGCTACTCAGATGTCCAA 59.315 50.000 11.93 0.00 45.14 3.53
3959 4814 3.129462 CGAGAGCTACTCAGATGTCCAAA 59.871 47.826 11.93 0.00 45.14 3.28
3960 4815 4.202101 CGAGAGCTACTCAGATGTCCAAAT 60.202 45.833 11.93 0.00 45.14 2.32
3961 4816 5.021033 AGAGCTACTCAGATGTCCAAATG 57.979 43.478 0.00 0.00 32.06 2.32
3962 4817 4.713814 AGAGCTACTCAGATGTCCAAATGA 59.286 41.667 0.00 0.00 32.06 2.57
3963 4818 5.366186 AGAGCTACTCAGATGTCCAAATGAT 59.634 40.000 0.00 0.00 32.06 2.45
3964 4819 5.609423 AGCTACTCAGATGTCCAAATGATC 58.391 41.667 0.00 0.00 0.00 2.92
3965 4820 5.366186 AGCTACTCAGATGTCCAAATGATCT 59.634 40.000 0.00 0.00 0.00 2.75
3966 4821 6.552725 AGCTACTCAGATGTCCAAATGATCTA 59.447 38.462 0.00 0.00 0.00 1.98
3967 4822 7.070447 AGCTACTCAGATGTCCAAATGATCTAA 59.930 37.037 0.00 0.00 0.00 2.10
3968 4823 7.712639 GCTACTCAGATGTCCAAATGATCTAAA 59.287 37.037 0.00 0.00 0.00 1.85
3969 4824 9.605275 CTACTCAGATGTCCAAATGATCTAAAA 57.395 33.333 0.00 0.00 0.00 1.52
3971 4826 9.471702 ACTCAGATGTCCAAATGATCTAAAATT 57.528 29.630 0.00 0.00 0.00 1.82
3978 4833 9.912634 TGTCCAAATGATCTAAAATTTGAAGAC 57.087 29.630 14.61 13.77 43.41 3.01
3979 4834 9.358872 GTCCAAATGATCTAAAATTTGAAGACC 57.641 33.333 14.61 0.00 43.41 3.85
3980 4835 9.087871 TCCAAATGATCTAAAATTTGAAGACCA 57.912 29.630 14.61 3.60 43.41 4.02
3981 4836 9.880157 CCAAATGATCTAAAATTTGAAGACCAT 57.120 29.630 14.61 5.26 43.41 3.55
3987 4842 9.922305 GATCTAAAATTTGAAGACCATCTTACG 57.078 33.333 5.82 0.00 36.73 3.18
3988 4843 7.748847 TCTAAAATTTGAAGACCATCTTACGC 58.251 34.615 0.00 0.00 36.73 4.42
3989 4844 5.957842 AAATTTGAAGACCATCTTACGCA 57.042 34.783 0.00 0.00 36.73 5.24
3990 4845 4.946784 ATTTGAAGACCATCTTACGCAC 57.053 40.909 0.00 0.00 36.73 5.34
3991 4846 2.380084 TGAAGACCATCTTACGCACC 57.620 50.000 0.00 0.00 36.73 5.01
3992 4847 1.621317 TGAAGACCATCTTACGCACCA 59.379 47.619 0.00 0.00 36.73 4.17
3993 4848 2.037902 TGAAGACCATCTTACGCACCAA 59.962 45.455 0.00 0.00 36.73 3.67
3994 4849 2.851263 AGACCATCTTACGCACCAAA 57.149 45.000 0.00 0.00 0.00 3.28
3995 4850 3.350219 AGACCATCTTACGCACCAAAT 57.650 42.857 0.00 0.00 0.00 2.32
3996 4851 3.686016 AGACCATCTTACGCACCAAATT 58.314 40.909 0.00 0.00 0.00 1.82
3997 4852 4.839121 AGACCATCTTACGCACCAAATTA 58.161 39.130 0.00 0.00 0.00 1.40
3998 4853 5.437060 AGACCATCTTACGCACCAAATTAT 58.563 37.500 0.00 0.00 0.00 1.28
3999 4854 6.588204 AGACCATCTTACGCACCAAATTATA 58.412 36.000 0.00 0.00 0.00 0.98
4000 4855 7.224297 AGACCATCTTACGCACCAAATTATAT 58.776 34.615 0.00 0.00 0.00 0.86
4001 4856 7.719633 AGACCATCTTACGCACCAAATTATATT 59.280 33.333 0.00 0.00 0.00 1.28
4002 4857 7.871853 ACCATCTTACGCACCAAATTATATTC 58.128 34.615 0.00 0.00 0.00 1.75
4003 4858 7.040686 ACCATCTTACGCACCAAATTATATTCC 60.041 37.037 0.00 0.00 0.00 3.01
4004 4859 7.040755 CCATCTTACGCACCAAATTATATTCCA 60.041 37.037 0.00 0.00 0.00 3.53
4005 4860 8.514594 CATCTTACGCACCAAATTATATTCCAT 58.485 33.333 0.00 0.00 0.00 3.41
4006 4861 7.870826 TCTTACGCACCAAATTATATTCCATG 58.129 34.615 0.00 0.00 0.00 3.66
4007 4862 7.500892 TCTTACGCACCAAATTATATTCCATGT 59.499 33.333 0.00 0.00 0.00 3.21
4008 4863 8.678593 TTACGCACCAAATTATATTCCATGTA 57.321 30.769 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
785 789 4.603610 TGAAAGGGAAAGGAGAGGAGAAAT 59.396 41.667 0.00 0.00 0.00 2.17
794 798 1.478631 GGCCATGAAAGGGAAAGGAG 58.521 55.000 0.00 0.00 43.46 3.69
811 815 3.307379 AGGAACTTGACAAGTCGGC 57.693 52.632 20.81 12.91 41.91 5.54
827 831 4.794003 GCATCACTCAACACCAAGAAAAGG 60.794 45.833 0.00 0.00 0.00 3.11
831 835 2.229792 GGCATCACTCAACACCAAGAA 58.770 47.619 0.00 0.00 0.00 2.52
840 844 0.703488 TGGGATTGGGCATCACTCAA 59.297 50.000 0.00 0.00 36.08 3.02
843 847 0.680921 CGTTGGGATTGGGCATCACT 60.681 55.000 0.00 0.00 36.08 3.41
884 888 8.429493 TTCACACAGATATTTTCAGATAGCAG 57.571 34.615 0.00 0.00 0.00 4.24
885 889 8.969260 ATTCACACAGATATTTTCAGATAGCA 57.031 30.769 0.00 0.00 0.00 3.49
907 911 8.964420 TCCGTGAAAAATCAGTAAAATGATTC 57.036 30.769 6.15 0.00 46.64 2.52
911 915 8.434661 CCAAATCCGTGAAAAATCAGTAAAATG 58.565 33.333 0.00 0.00 0.00 2.32
916 920 6.938030 ACTACCAAATCCGTGAAAAATCAGTA 59.062 34.615 0.00 0.00 0.00 2.74
917 921 5.768164 ACTACCAAATCCGTGAAAAATCAGT 59.232 36.000 0.00 0.00 0.00 3.41
934 939 6.001460 CACACCTCTGGAAATTAACTACCAA 58.999 40.000 0.00 0.00 31.85 3.67
965 970 3.126001 AGATCAAGCAACAACGAGGAA 57.874 42.857 0.00 0.00 0.00 3.36
969 974 3.062099 GCGATTAGATCAAGCAACAACGA 59.938 43.478 0.00 0.00 0.00 3.85
1014 1019 0.370273 CCATTTCGCCTTCGTCTTCG 59.630 55.000 0.00 0.00 36.96 3.79
1465 1470 4.873129 GCTCTCGGCGGCATCGAA 62.873 66.667 10.53 0.00 39.00 3.71
1796 1801 2.190578 CGTCTCCTGGATTGGGGC 59.809 66.667 0.00 0.00 0.00 5.80
1803 1808 3.749064 GCGTGCTCGTCTCCTGGA 61.749 66.667 10.18 0.00 39.49 3.86
1913 1918 2.267006 CGCCTCTGGACATGCTGT 59.733 61.111 0.00 0.00 0.00 4.40
1944 1949 2.584418 CAGATCTCGGCCAGCACG 60.584 66.667 2.24 0.00 0.00 5.34
1990 1995 0.599558 TTCTGTTGCTTGCTGATGCC 59.400 50.000 0.00 0.00 38.71 4.40
1991 1996 2.259618 CATTCTGTTGCTTGCTGATGC 58.740 47.619 0.00 0.00 40.20 3.91
2012 2017 3.068024 GTGTTTCTTGCCTCCATGAACAA 59.932 43.478 0.00 0.00 35.58 2.83
2039 2044 4.411927 AGAAGAACTGCCTACTTCTCTGA 58.588 43.478 0.00 0.00 44.32 3.27
2145 2153 3.143515 GCCAAGGGCCTAGCAAGC 61.144 66.667 20.43 9.90 44.06 4.01
2244 2258 2.149803 TTGACGTCTACCACAGCGGG 62.150 60.000 17.92 0.00 40.22 6.13
2326 2340 3.827008 TCAGCATTGTCTCATAGGGAC 57.173 47.619 0.00 0.00 0.00 4.46
2362 2376 3.117491 TCTTCAGGACAGCAAGAACAG 57.883 47.619 0.00 0.00 0.00 3.16
2367 2381 5.106038 TGCAATATTTCTTCAGGACAGCAAG 60.106 40.000 0.00 0.00 0.00 4.01
2371 2385 5.879223 ACTCTGCAATATTTCTTCAGGACAG 59.121 40.000 0.00 0.00 0.00 3.51
2397 2411 8.816894 TCAATAGTAAATTGGCCATGGTAAAAA 58.183 29.630 14.67 3.36 0.00 1.94
2451 2465 8.307483 TGAAAACAAATGGTCAAAAGAAGTACA 58.693 29.630 0.00 0.00 0.00 2.90
2478 2506 8.129211 GGACAAAAATATTCTCGGGTATTTCTG 58.871 37.037 0.00 0.00 31.26 3.02
2512 2540 3.257375 ACATAACACGCCTCTTGTAGTGA 59.743 43.478 1.24 0.00 37.95 3.41
2515 2543 6.757010 AGAAATACATAACACGCCTCTTGTAG 59.243 38.462 0.00 0.00 0.00 2.74
2517 2545 5.488341 AGAAATACATAACACGCCTCTTGT 58.512 37.500 0.00 0.00 0.00 3.16
2547 2575 7.730084 TGAATAGAAGAGAGAGAGAGAGAGAG 58.270 42.308 0.00 0.00 0.00 3.20
2548 2576 7.675161 TGAATAGAAGAGAGAGAGAGAGAGA 57.325 40.000 0.00 0.00 0.00 3.10
2549 2577 7.389884 CCATGAATAGAAGAGAGAGAGAGAGAG 59.610 44.444 0.00 0.00 0.00 3.20
2550 2578 7.147320 ACCATGAATAGAAGAGAGAGAGAGAGA 60.147 40.741 0.00 0.00 0.00 3.10
2551 2579 7.000472 ACCATGAATAGAAGAGAGAGAGAGAG 59.000 42.308 0.00 0.00 0.00 3.20
2552 2580 6.910191 ACCATGAATAGAAGAGAGAGAGAGA 58.090 40.000 0.00 0.00 0.00 3.10
2553 2581 7.000472 AGACCATGAATAGAAGAGAGAGAGAG 59.000 42.308 0.00 0.00 0.00 3.20
2554 2582 6.910191 AGACCATGAATAGAAGAGAGAGAGA 58.090 40.000 0.00 0.00 0.00 3.10
2555 2583 7.000472 AGAGACCATGAATAGAAGAGAGAGAG 59.000 42.308 0.00 0.00 0.00 3.20
2556 2584 6.910191 AGAGACCATGAATAGAAGAGAGAGA 58.090 40.000 0.00 0.00 0.00 3.10
2557 2585 7.587037 AAGAGACCATGAATAGAAGAGAGAG 57.413 40.000 0.00 0.00 0.00 3.20
2558 2586 7.617329 TCAAAGAGACCATGAATAGAAGAGAGA 59.383 37.037 0.00 0.00 0.00 3.10
2559 2587 7.780064 TCAAAGAGACCATGAATAGAAGAGAG 58.220 38.462 0.00 0.00 0.00 3.20
2560 2588 7.724490 TCAAAGAGACCATGAATAGAAGAGA 57.276 36.000 0.00 0.00 0.00 3.10
2561 2589 8.961294 AATCAAAGAGACCATGAATAGAAGAG 57.039 34.615 0.00 0.00 0.00 2.85
2562 2590 9.170734 CAAATCAAAGAGACCATGAATAGAAGA 57.829 33.333 0.00 0.00 0.00 2.87
2563 2591 7.914346 GCAAATCAAAGAGACCATGAATAGAAG 59.086 37.037 0.00 0.00 0.00 2.85
2564 2592 7.394077 TGCAAATCAAAGAGACCATGAATAGAA 59.606 33.333 0.00 0.00 0.00 2.10
2565 2593 6.885918 TGCAAATCAAAGAGACCATGAATAGA 59.114 34.615 0.00 0.00 0.00 1.98
2566 2594 7.066645 TCTGCAAATCAAAGAGACCATGAATAG 59.933 37.037 0.00 0.00 0.00 1.73
2587 2617 9.122779 TCATGACATTACAATCATATTTCTGCA 57.877 29.630 0.00 0.00 33.73 4.41
2620 2773 8.129211 CGAACAAACCAAAATCCTATAAGATCC 58.871 37.037 0.00 0.00 0.00 3.36
2628 2781 5.941058 TGCTATCGAACAAACCAAAATCCTA 59.059 36.000 0.00 0.00 0.00 2.94
2683 2838 6.870769 AGGATTTTTAGCATCCACTCAAATG 58.129 36.000 3.10 0.00 42.63 2.32
2784 2952 6.749923 AGAAATTTGAGAGGATTACAGTGC 57.250 37.500 0.00 0.00 0.00 4.40
2817 2985 3.243737 ACGAGGGCCTTTTTGATTCAAAC 60.244 43.478 7.89 0.68 32.79 2.93
2832 3000 4.072088 CGTTTCACGCACGAGGGC 62.072 66.667 0.00 0.00 40.20 5.19
2851 3019 6.610020 TGGTATGGAGTAGTAGTAACAAGCAT 59.390 38.462 0.00 0.00 0.00 3.79
2871 3039 4.957954 ACATGATGCAATTCAAGGTGGTAT 59.042 37.500 0.00 0.00 0.00 2.73
2899 3719 4.704965 ACACTCTTTAGGGAGTTTGTGTC 58.295 43.478 0.00 0.00 43.14 3.67
2916 3736 9.803315 AAAACCTGATAAAAGAAAAGAACACTC 57.197 29.630 0.00 0.00 0.00 3.51
3032 3857 6.588719 TCCATCAACTCCAAAACCAATAAG 57.411 37.500 0.00 0.00 0.00 1.73
3051 3879 4.346730 TCAACAATCTTCAGCCAATCCAT 58.653 39.130 0.00 0.00 0.00 3.41
3052 3880 3.765381 TCAACAATCTTCAGCCAATCCA 58.235 40.909 0.00 0.00 0.00 3.41
3053 3881 4.996788 ATCAACAATCTTCAGCCAATCC 57.003 40.909 0.00 0.00 0.00 3.01
3054 3882 6.628185 AGAAATCAACAATCTTCAGCCAATC 58.372 36.000 0.00 0.00 0.00 2.67
3055 3883 6.600882 AGAAATCAACAATCTTCAGCCAAT 57.399 33.333 0.00 0.00 0.00 3.16
3056 3884 6.409524 AAGAAATCAACAATCTTCAGCCAA 57.590 33.333 0.00 0.00 0.00 4.52
3057 3885 6.409524 AAAGAAATCAACAATCTTCAGCCA 57.590 33.333 0.00 0.00 32.45 4.75
3058 3886 6.808704 GGTAAAGAAATCAACAATCTTCAGCC 59.191 38.462 0.00 0.00 32.45 4.85
3060 3888 9.918630 AATGGTAAAGAAATCAACAATCTTCAG 57.081 29.630 0.00 0.00 32.45 3.02
3061 3889 9.695526 CAATGGTAAAGAAATCAACAATCTTCA 57.304 29.630 0.00 0.00 32.45 3.02
3062 3890 9.696917 ACAATGGTAAAGAAATCAACAATCTTC 57.303 29.630 0.00 0.00 32.45 2.87
3097 3925 0.532573 ACACATCATCTTCGCCGAGT 59.467 50.000 0.00 0.00 0.00 4.18
3157 3985 5.106157 GCTAACAAAATCAGCACACCTATGT 60.106 40.000 0.00 0.00 40.80 2.29
3158 3986 5.335127 GCTAACAAAATCAGCACACCTATG 58.665 41.667 0.00 0.00 35.35 2.23
3227 4055 8.571336 AGATCATTTGTCCTTTTCTTTGTACAG 58.429 33.333 0.00 0.00 0.00 2.74
3236 4064 6.749923 ACAGCTAGATCATTTGTCCTTTTC 57.250 37.500 0.00 0.00 0.00 2.29
3239 4067 6.059787 AGAACAGCTAGATCATTTGTCCTT 57.940 37.500 0.00 0.00 0.00 3.36
3241 4069 6.749923 AAAGAACAGCTAGATCATTTGTCC 57.250 37.500 0.00 0.00 0.00 4.02
3244 4075 5.510674 CGCAAAAGAACAGCTAGATCATTTG 59.489 40.000 14.15 14.15 39.33 2.32
3249 4080 5.476752 AATCGCAAAAGAACAGCTAGATC 57.523 39.130 0.00 0.00 0.00 2.75
3320 4154 6.101997 GGAGCAAAATTCCTTTTACTGATGG 58.898 40.000 0.00 0.00 32.81 3.51
3327 4168 4.093743 GAGGGGGAGCAAAATTCCTTTTA 58.906 43.478 0.00 0.00 32.81 1.52
3329 4170 2.158173 TGAGGGGGAGCAAAATTCCTTT 60.158 45.455 0.00 0.00 35.01 3.11
3332 4173 1.937191 TTGAGGGGGAGCAAAATTCC 58.063 50.000 0.00 0.00 0.00 3.01
3334 4175 3.516700 CAGATTTGAGGGGGAGCAAAATT 59.483 43.478 0.00 0.00 37.52 1.82
3343 4184 6.608808 AGTCAATTAATTCAGATTTGAGGGGG 59.391 38.462 0.00 0.00 34.15 5.40
3345 4186 8.284945 TGAGTCAATTAATTCAGATTTGAGGG 57.715 34.615 0.00 0.00 34.15 4.30
3348 4189 7.613022 AGGCTGAGTCAATTAATTCAGATTTGA 59.387 33.333 15.86 1.09 39.46 2.69
3349 4190 7.769220 AGGCTGAGTCAATTAATTCAGATTTG 58.231 34.615 15.86 0.00 39.46 2.32
3350 4191 7.833183 AGAGGCTGAGTCAATTAATTCAGATTT 59.167 33.333 15.86 3.65 39.46 2.17
3351 4192 7.344913 AGAGGCTGAGTCAATTAATTCAGATT 58.655 34.615 15.86 2.11 39.46 2.40
3355 4210 7.882791 TGTTTAGAGGCTGAGTCAATTAATTCA 59.117 33.333 0.00 0.00 0.00 2.57
3356 4211 8.268850 TGTTTAGAGGCTGAGTCAATTAATTC 57.731 34.615 0.00 0.00 0.00 2.17
3368 4223 5.500234 ACATTTATGCTGTTTAGAGGCTGA 58.500 37.500 0.00 0.00 0.00 4.26
3371 4226 6.677781 TGTACATTTATGCTGTTTAGAGGC 57.322 37.500 0.00 0.00 0.00 4.70
3372 4227 8.437360 TCATGTACATTTATGCTGTTTAGAGG 57.563 34.615 5.37 0.00 0.00 3.69
3373 4228 9.708222 GTTCATGTACATTTATGCTGTTTAGAG 57.292 33.333 5.37 0.00 0.00 2.43
3374 4229 9.225436 TGTTCATGTACATTTATGCTGTTTAGA 57.775 29.630 5.37 0.00 0.00 2.10
3377 4232 9.142515 CAATGTTCATGTACATTTATGCTGTTT 57.857 29.630 23.40 2.18 44.18 2.83
3378 4233 7.760794 CCAATGTTCATGTACATTTATGCTGTT 59.239 33.333 23.40 2.82 44.18 3.16
3379 4234 7.122501 TCCAATGTTCATGTACATTTATGCTGT 59.877 33.333 23.40 2.73 44.18 4.40
3380 4235 7.482474 TCCAATGTTCATGTACATTTATGCTG 58.518 34.615 23.40 14.18 44.18 4.41
3381 4236 7.643569 TCCAATGTTCATGTACATTTATGCT 57.356 32.000 23.40 4.02 44.18 3.79
3382 4237 9.616634 CTATCCAATGTTCATGTACATTTATGC 57.383 33.333 23.40 0.00 44.18 3.14
3385 4240 9.559732 CCTCTATCCAATGTTCATGTACATTTA 57.440 33.333 23.40 16.46 44.18 1.40
3386 4241 8.055181 ACCTCTATCCAATGTTCATGTACATTT 58.945 33.333 23.40 14.40 44.18 2.32
3387 4242 7.577303 ACCTCTATCCAATGTTCATGTACATT 58.423 34.615 21.09 21.09 46.73 2.71
3390 4245 7.047891 TCAACCTCTATCCAATGTTCATGTAC 58.952 38.462 0.00 0.00 0.00 2.90
3393 4248 6.118170 ACTCAACCTCTATCCAATGTTCATG 58.882 40.000 0.00 0.00 0.00 3.07
3397 4252 5.762179 TGACTCAACCTCTATCCAATGTT 57.238 39.130 0.00 0.00 0.00 2.71
3427 4282 6.313519 AGTTGTGCTATTCCCTTCAATCTA 57.686 37.500 0.00 0.00 0.00 1.98
3428 4283 5.184892 AGTTGTGCTATTCCCTTCAATCT 57.815 39.130 0.00 0.00 0.00 2.40
3434 4289 1.906574 TCCGAGTTGTGCTATTCCCTT 59.093 47.619 0.00 0.00 0.00 3.95
3437 4292 4.394920 TGAAAATCCGAGTTGTGCTATTCC 59.605 41.667 0.00 0.00 0.00 3.01
3440 4295 3.689649 GGTGAAAATCCGAGTTGTGCTAT 59.310 43.478 0.00 0.00 0.00 2.97
3459 4314 4.767255 GCTGTGAGGGCCGAGGTG 62.767 72.222 0.00 0.00 0.00 4.00
3465 4320 1.228245 TTGTGAAGCTGTGAGGGCC 60.228 57.895 0.00 0.00 0.00 5.80
3466 4321 1.239968 CCTTGTGAAGCTGTGAGGGC 61.240 60.000 0.00 0.00 0.00 5.19
3467 4322 0.109342 ACCTTGTGAAGCTGTGAGGG 59.891 55.000 0.00 0.00 0.00 4.30
3468 4323 2.693069 CTACCTTGTGAAGCTGTGAGG 58.307 52.381 0.00 0.00 0.00 3.86
3469 4324 2.072298 GCTACCTTGTGAAGCTGTGAG 58.928 52.381 0.00 0.00 33.40 3.51
3470 4325 1.605457 CGCTACCTTGTGAAGCTGTGA 60.605 52.381 0.00 0.00 34.03 3.58
3471 4326 0.792640 CGCTACCTTGTGAAGCTGTG 59.207 55.000 0.00 0.00 34.03 3.66
3472 4327 0.393077 ACGCTACCTTGTGAAGCTGT 59.607 50.000 0.00 0.00 34.03 4.40
3473 4328 0.792640 CACGCTACCTTGTGAAGCTG 59.207 55.000 0.00 0.00 38.36 4.24
3474 4329 0.951040 GCACGCTACCTTGTGAAGCT 60.951 55.000 0.00 0.00 38.36 3.74
3475 4330 1.497722 GCACGCTACCTTGTGAAGC 59.502 57.895 0.00 0.00 38.36 3.86
3476 4331 0.602638 TGGCACGCTACCTTGTGAAG 60.603 55.000 0.00 0.00 38.36 3.02
3477 4332 0.036164 ATGGCACGCTACCTTGTGAA 59.964 50.000 0.00 0.00 38.36 3.18
3478 4333 0.036164 AATGGCACGCTACCTTGTGA 59.964 50.000 0.00 0.00 38.36 3.58
3479 4334 0.168788 CAATGGCACGCTACCTTGTG 59.831 55.000 0.00 0.00 39.10 3.33
3480 4335 0.960364 CCAATGGCACGCTACCTTGT 60.960 55.000 0.00 0.00 0.00 3.16
3481 4336 1.656818 CCCAATGGCACGCTACCTTG 61.657 60.000 0.00 0.00 0.00 3.61
3482 4337 1.378514 CCCAATGGCACGCTACCTT 60.379 57.895 0.00 0.00 0.00 3.50
3483 4338 2.137177 AACCCAATGGCACGCTACCT 62.137 55.000 0.00 0.00 33.59 3.08
3484 4339 1.677633 AACCCAATGGCACGCTACC 60.678 57.895 0.00 0.00 33.59 3.18
3485 4340 1.506262 CAACCCAATGGCACGCTAC 59.494 57.895 0.00 0.00 33.59 3.58
3486 4341 1.677300 CCAACCCAATGGCACGCTA 60.677 57.895 0.00 0.00 32.78 4.26
3487 4342 2.990967 CCAACCCAATGGCACGCT 60.991 61.111 0.00 0.00 32.78 5.07
3488 4343 3.302344 ACCAACCCAATGGCACGC 61.302 61.111 0.00 0.00 44.75 5.34
3489 4344 2.650196 CACCAACCCAATGGCACG 59.350 61.111 0.00 0.00 44.75 5.34
3490 4345 2.343387 GCACCAACCCAATGGCAC 59.657 61.111 0.00 0.00 44.75 5.01
3491 4346 3.301554 CGCACCAACCCAATGGCA 61.302 61.111 0.00 0.00 44.75 4.92
3492 4347 2.988684 TCGCACCAACCCAATGGC 60.989 61.111 0.00 0.00 44.75 4.40
3493 4348 2.993471 GCTCGCACCAACCCAATGG 61.993 63.158 0.00 0.00 46.38 3.16
3494 4349 1.597797 ATGCTCGCACCAACCCAATG 61.598 55.000 0.00 0.00 0.00 2.82
3495 4350 0.899717 AATGCTCGCACCAACCCAAT 60.900 50.000 0.00 0.00 0.00 3.16
3496 4351 1.112315 AAATGCTCGCACCAACCCAA 61.112 50.000 0.00 0.00 0.00 4.12
3497 4352 1.523154 GAAATGCTCGCACCAACCCA 61.523 55.000 0.00 0.00 0.00 4.51
3498 4353 1.212751 GAAATGCTCGCACCAACCC 59.787 57.895 0.00 0.00 0.00 4.11
3499 4354 0.387239 GTGAAATGCTCGCACCAACC 60.387 55.000 0.00 0.00 34.46 3.77
3500 4355 0.310543 TGTGAAATGCTCGCACCAAC 59.689 50.000 0.00 0.00 39.68 3.77
3501 4356 2.712984 TGTGAAATGCTCGCACCAA 58.287 47.368 0.00 0.00 39.68 3.67
3502 4357 4.471761 TGTGAAATGCTCGCACCA 57.528 50.000 0.00 0.00 39.68 4.17
3506 4361 2.854185 GCCTAAAATGTGAAATGCTCGC 59.146 45.455 0.00 0.00 34.93 5.03
3507 4362 4.100529 CAGCCTAAAATGTGAAATGCTCG 58.899 43.478 0.00 0.00 0.00 5.03
3508 4363 4.082026 ACCAGCCTAAAATGTGAAATGCTC 60.082 41.667 0.00 0.00 0.00 4.26
3509 4364 3.834231 ACCAGCCTAAAATGTGAAATGCT 59.166 39.130 0.00 0.00 0.00 3.79
3510 4365 4.192429 ACCAGCCTAAAATGTGAAATGC 57.808 40.909 0.00 0.00 0.00 3.56
3511 4366 5.540911 ACAACCAGCCTAAAATGTGAAATG 58.459 37.500 0.00 0.00 0.00 2.32
3512 4367 5.806654 ACAACCAGCCTAAAATGTGAAAT 57.193 34.783 0.00 0.00 0.00 2.17
3513 4368 6.716934 TTACAACCAGCCTAAAATGTGAAA 57.283 33.333 0.00 0.00 0.00 2.69
3514 4369 6.491745 TCATTACAACCAGCCTAAAATGTGAA 59.508 34.615 0.00 0.00 0.00 3.18
3515 4370 6.007076 TCATTACAACCAGCCTAAAATGTGA 58.993 36.000 0.00 0.00 0.00 3.58
3516 4371 6.266168 TCATTACAACCAGCCTAAAATGTG 57.734 37.500 0.00 0.00 0.00 3.21
3517 4372 5.418840 CCTCATTACAACCAGCCTAAAATGT 59.581 40.000 0.00 0.00 0.00 2.71
3518 4373 5.652014 TCCTCATTACAACCAGCCTAAAATG 59.348 40.000 0.00 0.00 0.00 2.32
3519 4374 5.826643 TCCTCATTACAACCAGCCTAAAAT 58.173 37.500 0.00 0.00 0.00 1.82
3520 4375 5.222048 ACTCCTCATTACAACCAGCCTAAAA 60.222 40.000 0.00 0.00 0.00 1.52
3521 4376 4.288626 ACTCCTCATTACAACCAGCCTAAA 59.711 41.667 0.00 0.00 0.00 1.85
3522 4377 3.844211 ACTCCTCATTACAACCAGCCTAA 59.156 43.478 0.00 0.00 0.00 2.69
3523 4378 3.450904 ACTCCTCATTACAACCAGCCTA 58.549 45.455 0.00 0.00 0.00 3.93
3524 4379 2.269940 ACTCCTCATTACAACCAGCCT 58.730 47.619 0.00 0.00 0.00 4.58
3525 4380 2.789409 ACTCCTCATTACAACCAGCC 57.211 50.000 0.00 0.00 0.00 4.85
3526 4381 5.023533 TGATACTCCTCATTACAACCAGC 57.976 43.478 0.00 0.00 0.00 4.85
3527 4382 9.862371 GTATATGATACTCCTCATTACAACCAG 57.138 37.037 0.00 0.00 37.13 4.00
3528 4383 9.601810 AGTATATGATACTCCTCATTACAACCA 57.398 33.333 0.00 0.00 37.13 3.67
3574 4429 9.409918 GCATTAGGGAGATAGTATCATACACTA 57.590 37.037 12.66 10.34 33.22 2.74
3575 4430 7.895962 TGCATTAGGGAGATAGTATCATACACT 59.104 37.037 12.66 11.19 0.00 3.55
3576 4431 8.067751 TGCATTAGGGAGATAGTATCATACAC 57.932 38.462 12.66 4.84 0.00 2.90
3577 4432 8.844865 ATGCATTAGGGAGATAGTATCATACA 57.155 34.615 12.66 0.00 0.00 2.29
3642 4497 9.495572 TGTTATGTTACTTTGTGTCATGTATGA 57.504 29.630 0.00 0.00 0.00 2.15
3680 4535 9.696572 AGGTGTAGTATTATATCATGATACCGT 57.303 33.333 17.60 8.78 33.57 4.83
3700 4555 8.730680 GCATTAAATGAAGAAAGAGAAGGTGTA 58.269 33.333 0.00 0.00 0.00 2.90
3701 4556 7.449704 AGCATTAAATGAAGAAAGAGAAGGTGT 59.550 33.333 0.00 0.00 0.00 4.16
3702 4557 7.824672 AGCATTAAATGAAGAAAGAGAAGGTG 58.175 34.615 0.00 0.00 0.00 4.00
3703 4558 9.692325 ATAGCATTAAATGAAGAAAGAGAAGGT 57.308 29.630 0.00 0.00 0.00 3.50
3723 4578 9.918630 GGCAATTTTAATGAGATGTTATAGCAT 57.081 29.630 1.16 1.16 0.00 3.79
3724 4579 9.135189 AGGCAATTTTAATGAGATGTTATAGCA 57.865 29.630 0.00 0.00 0.00 3.49
3730 4585 8.253113 CCAACTAGGCAATTTTAATGAGATGTT 58.747 33.333 0.00 0.00 0.00 2.71
3731 4586 7.615365 TCCAACTAGGCAATTTTAATGAGATGT 59.385 33.333 0.00 0.00 37.29 3.06
3732 4587 7.999679 TCCAACTAGGCAATTTTAATGAGATG 58.000 34.615 0.00 0.00 37.29 2.90
3733 4588 8.593945 TTCCAACTAGGCAATTTTAATGAGAT 57.406 30.769 0.00 0.00 37.29 2.75
3734 4589 8.469200 CATTCCAACTAGGCAATTTTAATGAGA 58.531 33.333 0.00 0.00 37.29 3.27
3735 4590 7.223387 GCATTCCAACTAGGCAATTTTAATGAG 59.777 37.037 0.00 0.00 37.29 2.90
3736 4591 7.041107 GCATTCCAACTAGGCAATTTTAATGA 58.959 34.615 0.00 0.00 37.29 2.57
3737 4592 6.817641 TGCATTCCAACTAGGCAATTTTAATG 59.182 34.615 0.00 0.00 37.29 1.90
3738 4593 6.945218 TGCATTCCAACTAGGCAATTTTAAT 58.055 32.000 0.00 0.00 37.29 1.40
3739 4594 6.352016 TGCATTCCAACTAGGCAATTTTAA 57.648 33.333 0.00 0.00 37.29 1.52
3740 4595 5.991933 TGCATTCCAACTAGGCAATTTTA 57.008 34.783 0.00 0.00 37.29 1.52
3741 4596 4.888326 TGCATTCCAACTAGGCAATTTT 57.112 36.364 0.00 0.00 37.29 1.82
3742 4597 4.467082 TCATGCATTCCAACTAGGCAATTT 59.533 37.500 0.00 0.00 38.08 1.82
3743 4598 4.025360 TCATGCATTCCAACTAGGCAATT 58.975 39.130 0.00 0.00 38.08 2.32
3744 4599 3.634504 TCATGCATTCCAACTAGGCAAT 58.365 40.909 0.00 0.00 38.08 3.56
3745 4600 3.084536 TCATGCATTCCAACTAGGCAA 57.915 42.857 0.00 0.00 38.08 4.52
3746 4601 2.804986 TCATGCATTCCAACTAGGCA 57.195 45.000 0.00 0.00 39.03 4.75
3747 4602 4.392940 AGTATCATGCATTCCAACTAGGC 58.607 43.478 0.00 0.00 37.29 3.93
3748 4603 7.220030 AGTTAGTATCATGCATTCCAACTAGG 58.780 38.462 0.00 0.00 39.47 3.02
3749 4604 9.935241 ATAGTTAGTATCATGCATTCCAACTAG 57.065 33.333 0.00 0.00 31.62 2.57
3750 4605 9.710900 CATAGTTAGTATCATGCATTCCAACTA 57.289 33.333 0.00 6.07 32.37 2.24
3751 4606 8.432013 TCATAGTTAGTATCATGCATTCCAACT 58.568 33.333 0.00 4.02 0.00 3.16
3752 4607 8.607441 TCATAGTTAGTATCATGCATTCCAAC 57.393 34.615 0.00 0.00 0.00 3.77
3754 4609 9.875691 GTATCATAGTTAGTATCATGCATTCCA 57.124 33.333 0.00 0.00 0.00 3.53
3759 4614 9.528489 TGGTAGTATCATAGTTAGTATCATGCA 57.472 33.333 0.00 0.00 0.00 3.96
3770 4625 7.931948 GCTGGTTGTAATGGTAGTATCATAGTT 59.068 37.037 0.00 0.00 0.00 2.24
3771 4626 7.442656 GCTGGTTGTAATGGTAGTATCATAGT 58.557 38.462 0.00 0.00 0.00 2.12
3772 4627 6.874134 GGCTGGTTGTAATGGTAGTATCATAG 59.126 42.308 0.00 0.00 0.00 2.23
3773 4628 6.327887 TGGCTGGTTGTAATGGTAGTATCATA 59.672 38.462 0.00 0.00 0.00 2.15
3774 4629 5.131977 TGGCTGGTTGTAATGGTAGTATCAT 59.868 40.000 0.00 0.00 0.00 2.45
3775 4630 4.471747 TGGCTGGTTGTAATGGTAGTATCA 59.528 41.667 0.00 0.00 0.00 2.15
3776 4631 5.031066 TGGCTGGTTGTAATGGTAGTATC 57.969 43.478 0.00 0.00 0.00 2.24
3777 4632 4.719773 TCTGGCTGGTTGTAATGGTAGTAT 59.280 41.667 0.00 0.00 0.00 2.12
3778 4633 4.098155 TCTGGCTGGTTGTAATGGTAGTA 58.902 43.478 0.00 0.00 0.00 1.82
3779 4634 2.910319 TCTGGCTGGTTGTAATGGTAGT 59.090 45.455 0.00 0.00 0.00 2.73
3780 4635 3.055094 ACTCTGGCTGGTTGTAATGGTAG 60.055 47.826 0.00 0.00 0.00 3.18
3781 4636 2.910319 ACTCTGGCTGGTTGTAATGGTA 59.090 45.455 0.00 0.00 0.00 3.25
3782 4637 1.705186 ACTCTGGCTGGTTGTAATGGT 59.295 47.619 0.00 0.00 0.00 3.55
3783 4638 2.496899 ACTCTGGCTGGTTGTAATGG 57.503 50.000 0.00 0.00 0.00 3.16
3784 4639 7.807977 ATAAATACTCTGGCTGGTTGTAATG 57.192 36.000 0.00 0.00 0.00 1.90
3785 4640 8.823220 AAATAAATACTCTGGCTGGTTGTAAT 57.177 30.769 0.00 0.00 0.00 1.89
3786 4641 8.644374 AAAATAAATACTCTGGCTGGTTGTAA 57.356 30.769 0.00 0.00 0.00 2.41
3787 4642 9.391006 CTAAAATAAATACTCTGGCTGGTTGTA 57.609 33.333 0.00 0.00 0.00 2.41
3788 4643 8.107095 TCTAAAATAAATACTCTGGCTGGTTGT 58.893 33.333 0.00 0.00 0.00 3.32
3789 4644 8.506168 TCTAAAATAAATACTCTGGCTGGTTG 57.494 34.615 0.00 0.00 0.00 3.77
3790 4645 9.700831 ATTCTAAAATAAATACTCTGGCTGGTT 57.299 29.630 0.00 0.00 0.00 3.67
3791 4646 9.700831 AATTCTAAAATAAATACTCTGGCTGGT 57.299 29.630 0.00 0.00 0.00 4.00
3819 4674 8.141909 GCACATACAGTTGGATCAGTTATACTA 58.858 37.037 0.00 0.00 0.00 1.82
3820 4675 6.986817 GCACATACAGTTGGATCAGTTATACT 59.013 38.462 0.00 0.00 0.00 2.12
3821 4676 6.074302 CGCACATACAGTTGGATCAGTTATAC 60.074 42.308 0.00 0.00 0.00 1.47
3822 4677 5.983118 CGCACATACAGTTGGATCAGTTATA 59.017 40.000 0.00 0.00 0.00 0.98
3823 4678 4.811024 CGCACATACAGTTGGATCAGTTAT 59.189 41.667 0.00 0.00 0.00 1.89
3824 4679 4.180817 CGCACATACAGTTGGATCAGTTA 58.819 43.478 0.00 0.00 0.00 2.24
3825 4680 3.002791 CGCACATACAGTTGGATCAGTT 58.997 45.455 0.00 0.00 0.00 3.16
3826 4681 2.028112 ACGCACATACAGTTGGATCAGT 60.028 45.455 0.00 0.00 0.00 3.41
3827 4682 2.621338 ACGCACATACAGTTGGATCAG 58.379 47.619 0.00 0.00 0.00 2.90
3828 4683 2.760634 ACGCACATACAGTTGGATCA 57.239 45.000 0.00 0.00 0.00 2.92
3829 4684 2.534349 CGTACGCACATACAGTTGGATC 59.466 50.000 0.52 0.00 0.00 3.36
3830 4685 2.536365 CGTACGCACATACAGTTGGAT 58.464 47.619 0.52 0.00 0.00 3.41
3831 4686 1.403116 CCGTACGCACATACAGTTGGA 60.403 52.381 10.49 0.00 0.00 3.53
3832 4687 0.996462 CCGTACGCACATACAGTTGG 59.004 55.000 10.49 0.00 0.00 3.77
3833 4688 1.705256 ACCGTACGCACATACAGTTG 58.295 50.000 10.49 0.00 0.00 3.16
3834 4689 2.728846 CGTACCGTACGCACATACAGTT 60.729 50.000 17.55 0.00 45.81 3.16
3835 4690 1.202065 CGTACCGTACGCACATACAGT 60.202 52.381 17.55 2.10 45.81 3.55
3836 4691 1.459756 CGTACCGTACGCACATACAG 58.540 55.000 17.55 0.00 45.81 2.74
3837 4692 3.602310 CGTACCGTACGCACATACA 57.398 52.632 17.55 0.00 45.81 2.29
3846 4701 4.044426 AGAAACAAACACTCGTACCGTAC 58.956 43.478 0.00 0.00 0.00 3.67
3847 4702 4.043750 CAGAAACAAACACTCGTACCGTA 58.956 43.478 0.00 0.00 0.00 4.02
3848 4703 2.861935 CAGAAACAAACACTCGTACCGT 59.138 45.455 0.00 0.00 0.00 4.83
3849 4704 2.861935 ACAGAAACAAACACTCGTACCG 59.138 45.455 0.00 0.00 0.00 4.02
3850 4705 5.045872 ACTACAGAAACAAACACTCGTACC 58.954 41.667 0.00 0.00 0.00 3.34
3851 4706 5.517770 ACACTACAGAAACAAACACTCGTAC 59.482 40.000 0.00 0.00 0.00 3.67
3852 4707 5.517411 CACACTACAGAAACAAACACTCGTA 59.483 40.000 0.00 0.00 0.00 3.43
3853 4708 4.328983 CACACTACAGAAACAAACACTCGT 59.671 41.667 0.00 0.00 0.00 4.18
3854 4709 4.328983 ACACACTACAGAAACAAACACTCG 59.671 41.667 0.00 0.00 0.00 4.18
3855 4710 5.796350 ACACACTACAGAAACAAACACTC 57.204 39.130 0.00 0.00 0.00 3.51
3856 4711 7.675962 TTAACACACTACAGAAACAAACACT 57.324 32.000 0.00 0.00 0.00 3.55
3857 4712 8.730970 TTTTAACACACTACAGAAACAAACAC 57.269 30.769 0.00 0.00 0.00 3.32
3930 4785 4.848562 TCTGAGTAGCTCTCGACAAAAA 57.151 40.909 0.00 0.00 45.46 1.94
3931 4786 4.218635 ACATCTGAGTAGCTCTCGACAAAA 59.781 41.667 0.00 0.00 45.46 2.44
3932 4787 3.759086 ACATCTGAGTAGCTCTCGACAAA 59.241 43.478 0.00 0.00 45.46 2.83
3933 4788 3.348119 ACATCTGAGTAGCTCTCGACAA 58.652 45.455 0.00 0.00 45.46 3.18
3934 4789 2.939756 GACATCTGAGTAGCTCTCGACA 59.060 50.000 0.00 0.00 45.46 4.35
3935 4790 2.289547 GGACATCTGAGTAGCTCTCGAC 59.710 54.545 0.00 0.00 45.46 4.20
3936 4791 2.092914 TGGACATCTGAGTAGCTCTCGA 60.093 50.000 0.00 0.29 45.46 4.04
3937 4792 2.293170 TGGACATCTGAGTAGCTCTCG 58.707 52.381 0.00 0.00 45.46 4.04
3938 4793 4.727507 TTTGGACATCTGAGTAGCTCTC 57.272 45.455 0.00 0.00 43.03 3.20
3939 4794 4.713814 TCATTTGGACATCTGAGTAGCTCT 59.286 41.667 0.00 0.00 0.00 4.09
3940 4795 5.016051 TCATTTGGACATCTGAGTAGCTC 57.984 43.478 0.00 0.00 0.00 4.09
3941 4796 5.366186 AGATCATTTGGACATCTGAGTAGCT 59.634 40.000 0.00 0.00 0.00 3.32
3942 4797 5.609423 AGATCATTTGGACATCTGAGTAGC 58.391 41.667 0.00 0.00 0.00 3.58
3943 4798 9.605275 TTTTAGATCATTTGGACATCTGAGTAG 57.395 33.333 0.00 0.00 0.00 2.57
3945 4800 9.471702 AATTTTAGATCATTTGGACATCTGAGT 57.528 29.630 0.00 0.00 0.00 3.41
3952 4807 9.912634 GTCTTCAAATTTTAGATCATTTGGACA 57.087 29.630 13.37 0.00 39.76 4.02
3953 4808 9.358872 GGTCTTCAAATTTTAGATCATTTGGAC 57.641 33.333 13.37 12.80 39.76 4.02
3954 4809 9.087871 TGGTCTTCAAATTTTAGATCATTTGGA 57.912 29.630 13.37 6.69 39.76 3.53
3955 4810 9.880157 ATGGTCTTCAAATTTTAGATCATTTGG 57.120 29.630 15.40 2.90 36.59 3.28
3961 4816 9.922305 CGTAAGATGGTCTTCAAATTTTAGATC 57.078 33.333 3.74 3.96 37.89 2.75
3962 4817 8.398665 GCGTAAGATGGTCTTCAAATTTTAGAT 58.601 33.333 3.74 0.00 37.89 1.98
3963 4818 7.389330 TGCGTAAGATGGTCTTCAAATTTTAGA 59.611 33.333 0.00 0.00 37.89 2.10
3964 4819 7.481798 GTGCGTAAGATGGTCTTCAAATTTTAG 59.518 37.037 0.00 0.00 37.89 1.85
3965 4820 7.302524 GTGCGTAAGATGGTCTTCAAATTTTA 58.697 34.615 0.00 0.00 37.89 1.52
3966 4821 6.149633 GTGCGTAAGATGGTCTTCAAATTTT 58.850 36.000 0.00 0.00 37.89 1.82
3967 4822 5.335661 GGTGCGTAAGATGGTCTTCAAATTT 60.336 40.000 0.00 0.00 37.89 1.82
3968 4823 4.156008 GGTGCGTAAGATGGTCTTCAAATT 59.844 41.667 0.00 0.00 37.89 1.82
3969 4824 3.689649 GGTGCGTAAGATGGTCTTCAAAT 59.310 43.478 0.00 0.00 37.89 2.32
3970 4825 3.071479 GGTGCGTAAGATGGTCTTCAAA 58.929 45.455 0.00 0.00 37.89 2.69
3971 4826 2.037902 TGGTGCGTAAGATGGTCTTCAA 59.962 45.455 0.00 0.00 37.89 2.69
3972 4827 1.621317 TGGTGCGTAAGATGGTCTTCA 59.379 47.619 0.00 0.00 37.89 3.02
3973 4828 2.380084 TGGTGCGTAAGATGGTCTTC 57.620 50.000 0.00 0.00 37.89 2.87
3974 4829 2.851263 TTGGTGCGTAAGATGGTCTT 57.149 45.000 0.00 0.00 40.35 3.01
3975 4830 2.851263 TTTGGTGCGTAAGATGGTCT 57.149 45.000 0.00 0.00 43.02 3.85
3976 4831 5.751243 ATAATTTGGTGCGTAAGATGGTC 57.249 39.130 0.00 0.00 43.02 4.02
3977 4832 7.040686 GGAATATAATTTGGTGCGTAAGATGGT 60.041 37.037 0.00 0.00 43.02 3.55
3978 4833 7.040755 TGGAATATAATTTGGTGCGTAAGATGG 60.041 37.037 0.00 0.00 43.02 3.51
3979 4834 7.870826 TGGAATATAATTTGGTGCGTAAGATG 58.129 34.615 0.00 0.00 43.02 2.90
3980 4835 8.514594 CATGGAATATAATTTGGTGCGTAAGAT 58.485 33.333 0.00 0.00 43.02 2.40
3981 4836 7.500892 ACATGGAATATAATTTGGTGCGTAAGA 59.499 33.333 0.00 0.00 43.02 2.10
3982 4837 7.648142 ACATGGAATATAATTTGGTGCGTAAG 58.352 34.615 0.00 0.00 43.44 2.34
3983 4838 7.575414 ACATGGAATATAATTTGGTGCGTAA 57.425 32.000 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.