Multiple sequence alignment - TraesCS5A01G398400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G398400 chr5A 100.000 4767 0 0 1 4767 592298005 592293239 0.000000e+00 8804.0
1 TraesCS5A01G398400 chr5D 92.562 2057 104 18 2547 4572 472739945 472737907 0.000000e+00 2905.0
2 TraesCS5A01G398400 chr5D 90.146 1441 69 20 835 2249 472741843 472740450 0.000000e+00 1807.0
3 TraesCS5A01G398400 chr5D 86.520 319 43 0 229 547 472742157 472741839 7.590000e-93 351.0
4 TraesCS5A01G398400 chr5D 95.789 190 8 0 4572 4761 288133278 288133467 1.670000e-79 307.0
5 TraesCS5A01G398400 chr5D 86.923 260 12 6 2234 2479 472740433 472740182 6.080000e-69 272.0
6 TraesCS5A01G398400 chr5D 76.271 236 22 17 1 209 472742372 472742144 1.410000e-15 95.3
7 TraesCS5A01G398400 chr5D 90.385 52 5 0 4508 4559 472737922 472737871 8.560000e-08 69.4
8 TraesCS5A01G398400 chr5B 87.185 2341 176 30 1 2249 580108299 580105991 0.000000e+00 2547.0
9 TraesCS5A01G398400 chr5B 92.171 1801 94 16 2237 4017 580105972 580104199 0.000000e+00 2501.0
10 TraesCS5A01G398400 chr5B 94.211 190 11 0 4572 4761 75744276 75744465 1.680000e-74 291.0
11 TraesCS5A01G398400 chr5B 92.857 196 11 2 4568 4762 609684280 609684473 1.010000e-71 281.0
12 TraesCS5A01G398400 chr7A 80.245 734 97 33 2489 3187 567578485 567579205 4.260000e-140 508.0
13 TraesCS5A01G398400 chr7A 80.882 612 69 26 1562 2133 567577739 567578342 5.660000e-119 438.0
14 TraesCS5A01G398400 chr7A 87.647 170 17 2 3228 3397 567579206 567579371 1.350000e-45 195.0
15 TraesCS5A01G398400 chr7B 86.441 413 46 7 1723 2133 530374344 530374748 1.220000e-120 444.0
16 TraesCS5A01G398400 chr7B 93.333 195 8 3 4568 4762 589915765 589915954 2.810000e-72 283.0
17 TraesCS5A01G398400 chr7B 87.647 170 16 2 3228 3397 530375589 530375753 4.870000e-45 193.0
18 TraesCS5A01G398400 chr7D 81.287 513 56 16 1723 2232 501089965 501090440 3.480000e-101 379.0
19 TraesCS5A01G398400 chr7D 87.647 170 16 2 3228 3397 501091215 501091379 4.870000e-45 193.0
20 TraesCS5A01G398400 chr4A 94.388 196 9 2 4568 4761 741985004 741985199 2.790000e-77 300.0
21 TraesCS5A01G398400 chr3B 93.970 199 9 1 4568 4763 240267886 240267688 1.000000e-76 298.0
22 TraesCS5A01G398400 chr3B 93.194 191 12 1 4572 4762 385089058 385088869 3.630000e-71 279.0
23 TraesCS5A01G398400 chr6A 93.717 191 9 1 4572 4762 593697110 593696923 2.810000e-72 283.0
24 TraesCS5A01G398400 chr4B 93.299 194 9 2 4571 4761 437405211 437405019 2.810000e-72 283.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G398400 chr5A 592293239 592298005 4766 True 8804.000000 8804 100.000000 1 4767 1 chr5A.!!$R1 4766
1 TraesCS5A01G398400 chr5D 472737871 472742372 4501 True 916.616667 2905 87.134500 1 4572 6 chr5D.!!$R1 4571
2 TraesCS5A01G398400 chr5B 580104199 580108299 4100 True 2524.000000 2547 89.678000 1 4017 2 chr5B.!!$R1 4016
3 TraesCS5A01G398400 chr7A 567577739 567579371 1632 False 380.333333 508 82.924667 1562 3397 3 chr7A.!!$F1 1835
4 TraesCS5A01G398400 chr7B 530374344 530375753 1409 False 318.500000 444 87.044000 1723 3397 2 chr7B.!!$F2 1674
5 TraesCS5A01G398400 chr7D 501089965 501091379 1414 False 286.000000 379 84.467000 1723 3397 2 chr7D.!!$F1 1674

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
240 268 0.035458 CCTTGTCCTTGTCCGAGCTT 59.965 55.0 0.00 0.0 0.00 3.74 F
692 720 0.036671 GGGAGAATCGGGTTGACGTT 60.037 55.0 0.00 0.0 34.37 3.99 F
1285 1374 0.246635 TGACAGCGAAGGAGGTAAGC 59.753 55.0 0.00 0.0 0.00 3.09 F
1616 1743 0.240145 GTAAAACGGGGTGCTGAAGC 59.760 55.0 0.00 0.0 42.50 3.86 F
3405 3846 0.179056 ACACGTGGAGACAACAAGGG 60.179 55.0 21.57 0.0 46.06 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1231 1320 0.038166 TCCTTGCCTTCTTCGCCATT 59.962 50.000 0.0 0.0 0.00 3.16 R
1548 1675 0.904649 TGCCCTCGTCATCATCACTT 59.095 50.000 0.0 0.0 0.00 3.16 R
2645 3055 1.072505 GCACCCGAGAAACCTTGGA 59.927 57.895 0.0 0.0 37.39 3.53 R
3412 3853 0.171231 CAGACTCCGACGCTTCATCA 59.829 55.000 0.0 0.0 0.00 3.07 R
4663 5133 0.032217 GCCCATCCCCCTGAAAATCA 60.032 55.000 0.0 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 6.384224 TGTAGTGTAGTTTGTGATAAGGTCG 58.616 40.000 0.00 0.00 0.00 4.79
49 50 1.853963 AAGGTCGCCACTACTGAGAT 58.146 50.000 0.00 0.00 0.00 2.75
54 55 1.330655 CGCCACTACTGAGATGGGGT 61.331 60.000 9.72 0.00 40.58 4.95
55 56 0.179000 GCCACTACTGAGATGGGGTG 59.821 60.000 4.77 0.00 33.81 4.61
56 57 1.866015 CCACTACTGAGATGGGGTGA 58.134 55.000 0.00 0.00 0.00 4.02
57 58 1.482593 CCACTACTGAGATGGGGTGAC 59.517 57.143 0.00 0.00 0.00 3.67
58 59 2.179427 CACTACTGAGATGGGGTGACA 58.821 52.381 0.00 0.00 0.00 3.58
59 60 2.567169 CACTACTGAGATGGGGTGACAA 59.433 50.000 0.00 0.00 0.00 3.18
77 78 5.700832 GTGACAACAACATTAGGTCATGAGA 59.299 40.000 0.00 0.00 40.23 3.27
80 81 7.041167 TGACAACAACATTAGGTCATGAGAAAG 60.041 37.037 0.00 0.00 33.88 2.62
85 86 7.039504 ACAACATTAGGTCATGAGAAAGCAAAT 60.040 33.333 0.00 0.00 0.00 2.32
86 87 6.860080 ACATTAGGTCATGAGAAAGCAAATG 58.140 36.000 0.00 2.91 0.00 2.32
89 90 2.231964 GGTCATGAGAAAGCAAATGCCA 59.768 45.455 0.00 0.00 43.38 4.92
120 138 4.737054 CATCATCACAGCCTTAACCAAAC 58.263 43.478 0.00 0.00 0.00 2.93
139 157 1.271652 ACGCCATGTATGAAACCACCA 60.272 47.619 0.00 0.00 0.00 4.17
155 183 2.173519 CACCACCTCATTCAGCCAAAT 58.826 47.619 0.00 0.00 0.00 2.32
185 213 1.072173 AGCCTTGGCCCAATCAAAAAC 59.928 47.619 8.17 0.00 0.00 2.43
186 214 1.794512 CCTTGGCCCAATCAAAAACG 58.205 50.000 0.00 0.00 0.00 3.60
190 218 4.569341 CCCAATCAAAAACGGGCG 57.431 55.556 0.00 0.00 0.00 6.13
191 219 1.736282 CCCAATCAAAAACGGGCGC 60.736 57.895 0.00 0.00 0.00 6.53
194 222 1.006688 AATCAAAAACGGGCGCCAC 60.007 52.632 30.85 16.91 0.00 5.01
206 234 2.815308 CGCCACCTTATCCGAGCT 59.185 61.111 0.00 0.00 0.00 4.09
240 268 0.035458 CCTTGTCCTTGTCCGAGCTT 59.965 55.000 0.00 0.00 0.00 3.74
255 283 0.480252 AGCTTGAAGGAAGGCCAACT 59.520 50.000 5.01 0.00 36.29 3.16
262 290 1.079612 GGAAGGCCAACTGCAATGC 60.080 57.895 5.01 0.00 43.89 3.56
263 291 1.444895 GAAGGCCAACTGCAATGCG 60.445 57.895 5.01 0.00 43.89 4.73
268 296 2.652530 CAACTGCAATGCGCCCTT 59.347 55.556 4.18 0.00 41.33 3.95
275 303 1.378882 GCAATGCGCCCTTCTCATCA 61.379 55.000 4.18 0.00 32.94 3.07
314 342 2.231964 GCTTCTTCATGATTTGGGTGCA 59.768 45.455 0.00 0.00 0.00 4.57
329 357 0.871722 GTGCACCACGCTGTTATGAA 59.128 50.000 5.22 0.00 43.06 2.57
408 436 3.371063 GGTGGTGCTCGAGGACGA 61.371 66.667 27.67 22.87 46.56 4.20
419 447 2.039137 AGGACGAAGGAGGGGGTC 59.961 66.667 0.00 0.00 0.00 4.46
457 485 1.211212 TGGTGCTCAAGGATGGATGAG 59.789 52.381 0.00 0.00 44.66 2.90
464 492 1.056700 AAGGATGGATGAGGGGGTCG 61.057 60.000 0.00 0.00 0.00 4.79
466 494 3.171388 ATGGATGAGGGGGTCGGC 61.171 66.667 0.00 0.00 0.00 5.54
498 526 1.070786 GTGGTGCCTGAGGACGAAA 59.929 57.895 0.65 0.00 0.00 3.46
529 557 2.363795 ACGAAGGAGGGCATCGGA 60.364 61.111 0.00 0.00 40.71 4.55
573 601 1.406614 CGGAGACACGTAGTAGGGAGT 60.407 57.143 0.00 0.00 41.61 3.85
575 603 1.932511 GAGACACGTAGTAGGGAGTCG 59.067 57.143 0.00 0.00 41.61 4.18
639 667 1.078143 GATGGCGGTTCTCCTTGCT 60.078 57.895 0.00 0.00 0.00 3.91
641 669 3.435186 GGCGGTTCTCCTTGCTGC 61.435 66.667 0.00 0.00 0.00 5.25
642 670 2.669569 GCGGTTCTCCTTGCTGCA 60.670 61.111 0.00 0.00 34.85 4.41
645 673 1.576421 GGTTCTCCTTGCTGCAACG 59.424 57.895 11.69 8.02 0.00 4.10
653 681 0.165511 CTTGCTGCAACGAAGAGCTC 59.834 55.000 11.69 5.27 33.66 4.09
669 697 1.633171 CTCAAGCTCGATTTCGGCG 59.367 57.895 0.00 0.00 39.38 6.46
682 710 1.731433 TTCGGCGGTAGGGAGAATCG 61.731 60.000 7.21 0.00 34.37 3.34
686 714 1.683418 GCGGTAGGGAGAATCGGGTT 61.683 60.000 0.00 0.00 34.37 4.11
691 719 0.903454 AGGGAGAATCGGGTTGACGT 60.903 55.000 0.00 0.00 34.37 4.34
692 720 0.036671 GGGAGAATCGGGTTGACGTT 60.037 55.000 0.00 0.00 34.37 3.99
693 721 1.356938 GGAGAATCGGGTTGACGTTC 58.643 55.000 0.00 0.00 34.37 3.95
695 723 2.618053 GAGAATCGGGTTGACGTTCAT 58.382 47.619 0.00 0.00 34.94 2.57
710 738 2.164219 CGTTCATGAGAATGGGGTTTGG 59.836 50.000 0.00 0.00 37.16 3.28
711 739 3.430453 GTTCATGAGAATGGGGTTTGGA 58.570 45.455 0.00 0.00 35.92 3.53
715 748 1.999295 TGAGAATGGGGTTTGGATGGA 59.001 47.619 0.00 0.00 0.00 3.41
716 749 2.381618 TGAGAATGGGGTTTGGATGGAA 59.618 45.455 0.00 0.00 0.00 3.53
721 754 1.063266 TGGGGTTTGGATGGAATAGGC 60.063 52.381 0.00 0.00 0.00 3.93
727 760 4.098501 GGTTTGGATGGAATAGGCTTTGAG 59.901 45.833 0.00 0.00 0.00 3.02
728 761 4.860802 TTGGATGGAATAGGCTTTGAGA 57.139 40.909 0.00 0.00 0.00 3.27
750 783 2.886391 GCTGCTGGGGTGGGTTTTATAA 60.886 50.000 0.00 0.00 0.00 0.98
751 784 2.758423 CTGCTGGGGTGGGTTTTATAAC 59.242 50.000 0.00 0.00 0.00 1.89
752 785 2.380590 TGCTGGGGTGGGTTTTATAACT 59.619 45.455 0.00 0.00 34.59 2.24
758 791 3.366577 GGGTGGGTTTTATAACTGCAACG 60.367 47.826 0.00 0.00 34.59 4.10
772 805 1.444250 CAACGGGGCTAATCGGCTA 59.556 57.895 0.00 0.00 38.46 3.93
774 807 1.755393 AACGGGGCTAATCGGCTAGG 61.755 60.000 0.00 0.00 38.46 3.02
775 808 1.906824 CGGGGCTAATCGGCTAGGA 60.907 63.158 0.00 0.00 38.46 2.94
776 809 1.672320 GGGGCTAATCGGCTAGGAC 59.328 63.158 0.00 0.00 38.46 3.85
777 810 1.119574 GGGGCTAATCGGCTAGGACA 61.120 60.000 0.00 0.00 38.46 4.02
779 812 0.318784 GGCTAATCGGCTAGGACACG 60.319 60.000 0.00 0.00 34.85 4.49
780 813 0.318784 GCTAATCGGCTAGGACACGG 60.319 60.000 0.00 0.00 0.00 4.94
783 816 1.120530 AATCGGCTAGGACACGGATT 58.879 50.000 0.00 0.00 32.80 3.01
784 817 0.389391 ATCGGCTAGGACACGGATTG 59.611 55.000 0.00 0.00 0.00 2.67
786 819 1.522569 GGCTAGGACACGGATTGCT 59.477 57.895 0.00 0.00 0.00 3.91
803 836 1.643292 CTACACCATGAATGCGCCG 59.357 57.895 4.18 0.00 0.00 6.46
815 848 0.319040 ATGCGCCGATAGCTAGTGTG 60.319 55.000 4.18 0.00 40.39 3.82
816 849 1.359117 GCGCCGATAGCTAGTGTGA 59.641 57.895 0.00 0.00 40.39 3.58
820 853 2.927477 CGCCGATAGCTAGTGTGAAAAA 59.073 45.455 0.00 0.00 40.39 1.94
938 996 1.630878 CTAACCCTGAACCAGCCTCTT 59.369 52.381 0.00 0.00 0.00 2.85
944 1002 1.743252 GAACCAGCCTCTTCGCCTG 60.743 63.158 0.00 0.00 0.00 4.85
983 1041 0.465824 CACCCCGACTCCTCGATACT 60.466 60.000 0.00 0.00 43.06 2.12
1028 1086 4.057428 GCTGAGGTCGACACGGCT 62.057 66.667 26.95 13.48 33.73 5.52
1030 1088 4.357947 TGAGGTCGACACGGCTGC 62.358 66.667 18.91 0.00 0.00 5.25
1160 1239 4.219846 CGACGCCGACGACTCGAT 62.220 66.667 2.16 0.00 43.06 3.59
1164 1243 1.298413 CGCCGACGACTCGATTCAT 60.298 57.895 5.20 0.00 43.06 2.57
1231 1320 3.013921 GTTTCCGGCCATGAAACTGATA 58.986 45.455 28.13 4.72 45.10 2.15
1285 1374 0.246635 TGACAGCGAAGGAGGTAAGC 59.753 55.000 0.00 0.00 0.00 3.09
1288 1377 0.741221 CAGCGAAGGAGGTAAGCACC 60.741 60.000 0.00 0.00 46.19 5.01
1322 1411 3.825014 GCAGATAGTTACGAGGTATGGGA 59.175 47.826 0.00 0.00 0.00 4.37
1397 1486 0.600255 GCCGGTGATGATAGTTCGGG 60.600 60.000 1.90 0.00 38.12 5.14
1493 1608 6.897966 TGTGAAGAGATAAGGAGGATACAAGT 59.102 38.462 0.00 0.00 41.41 3.16
1501 1616 8.729047 AGATAAGGAGGATACAAGTAGAGAAGA 58.271 37.037 0.00 0.00 41.41 2.87
1528 1643 8.032952 CAGTAAGCTGTCAGTGAAATATTTCA 57.967 34.615 23.86 23.86 39.91 2.69
1544 1671 9.181805 GAAATATTTCAGATTAGACGACGATGA 57.818 33.333 20.89 0.00 37.15 2.92
1545 1672 9.698309 AAATATTTCAGATTAGACGACGATGAT 57.302 29.630 0.00 0.00 0.00 2.45
1546 1673 6.999956 ATTTCAGATTAGACGACGATGATG 57.000 37.500 0.00 0.00 0.00 3.07
1547 1674 5.751243 TTCAGATTAGACGACGATGATGA 57.249 39.130 0.00 0.00 0.00 2.92
1548 1675 5.751243 TCAGATTAGACGACGATGATGAA 57.249 39.130 0.00 0.00 0.00 2.57
1549 1676 6.131544 TCAGATTAGACGACGATGATGAAA 57.868 37.500 0.00 0.00 0.00 2.69
1550 1677 6.202226 TCAGATTAGACGACGATGATGAAAG 58.798 40.000 0.00 0.00 0.00 2.62
1551 1678 5.974158 CAGATTAGACGACGATGATGAAAGT 59.026 40.000 0.00 0.00 0.00 2.66
1552 1679 5.974158 AGATTAGACGACGATGATGAAAGTG 59.026 40.000 0.00 0.00 0.00 3.16
1553 1680 3.850122 AGACGACGATGATGAAAGTGA 57.150 42.857 0.00 0.00 0.00 3.41
1554 1681 4.377839 AGACGACGATGATGAAAGTGAT 57.622 40.909 0.00 0.00 0.00 3.06
1555 1682 4.108336 AGACGACGATGATGAAAGTGATG 58.892 43.478 0.00 0.00 0.00 3.07
1560 1687 5.332130 CGACGATGATGAAAGTGATGATGAC 60.332 44.000 0.00 0.00 0.00 3.06
1604 1731 4.334481 ACTGGTTCTGGACAAAGTAAAACG 59.666 41.667 0.00 0.00 0.00 3.60
1616 1743 0.240145 GTAAAACGGGGTGCTGAAGC 59.760 55.000 0.00 0.00 42.50 3.86
1717 1885 2.784347 CTGAGAAGGGGTTGAAGGAAC 58.216 52.381 0.00 0.00 0.00 3.62
1839 2016 6.205658 GTCAAGTGATCAAACCTAGAAAGCTT 59.794 38.462 0.00 0.00 0.00 3.74
1958 2136 6.846870 TTTAACTTGCGCGAAATCTAAATG 57.153 33.333 12.10 0.00 0.00 2.32
1983 2161 5.357878 TCTTGTGATAATGATCCAAACTGCC 59.642 40.000 0.00 0.00 0.00 4.85
1991 2169 9.077885 GATAATGATCCAAACTGCCCTTAATTA 57.922 33.333 0.00 0.00 0.00 1.40
2035 2218 8.397575 TGGTGCAAATTACAAGTTCATAACTA 57.602 30.769 0.00 0.00 41.91 2.24
2273 2492 7.130442 AGGGGGTAATTTGATAGAAACCTACAT 59.870 37.037 0.00 0.00 0.00 2.29
2341 2560 2.303022 TCTGGTCTACTTTGGCTCCTTG 59.697 50.000 0.00 0.00 0.00 3.61
2449 2682 1.999648 AAGTGGGCTGATTTTCTGCA 58.000 45.000 8.35 0.00 42.21 4.41
2541 2871 7.445402 AGCCATGTTACAGATATTATCAACCAC 59.555 37.037 6.46 0.00 0.00 4.16
2645 3055 8.987890 GTTGCTGGTGTGTTTTAAATATTGATT 58.012 29.630 0.00 0.00 0.00 2.57
2665 3086 1.515521 CCAAGGTTTCTCGGGTGCAC 61.516 60.000 8.80 8.80 0.00 4.57
2667 3088 0.535102 AAGGTTTCTCGGGTGCACTG 60.535 55.000 17.98 10.04 0.00 3.66
2697 3118 8.472007 TTTTCTTACTCTGCAAAAGGGAATTA 57.528 30.769 0.00 0.00 0.00 1.40
2831 3267 3.130633 CCAGCTTTAAAAACCTTGGCAC 58.869 45.455 0.00 0.00 0.00 5.01
2864 3300 6.092092 CGCATTCCTATCAACATTTGTTTCA 58.908 36.000 0.00 0.00 35.83 2.69
2901 3337 2.988493 CCAACGATGCTGGTCATTTTTG 59.012 45.455 0.00 0.00 35.05 2.44
3093 3533 6.893020 ACCCTTGTCTTACCAAAGATATCT 57.107 37.500 0.00 0.00 43.50 1.98
3165 3605 7.657336 CAAAGCTAGATCAACCCTTTAAACAA 58.343 34.615 0.00 0.00 0.00 2.83
3209 3649 5.853282 CGATTTCTGTGTTCTTTCCATTGTC 59.147 40.000 0.00 0.00 0.00 3.18
3214 3654 5.995282 TCTGTGTTCTTTCCATTGTCGTTAT 59.005 36.000 0.00 0.00 0.00 1.89
3215 3655 7.156000 TCTGTGTTCTTTCCATTGTCGTTATA 58.844 34.615 0.00 0.00 0.00 0.98
3216 3656 7.822334 TCTGTGTTCTTTCCATTGTCGTTATAT 59.178 33.333 0.00 0.00 0.00 0.86
3217 3657 9.093970 CTGTGTTCTTTCCATTGTCGTTATATA 57.906 33.333 0.00 0.00 0.00 0.86
3218 3658 8.875803 TGTGTTCTTTCCATTGTCGTTATATAC 58.124 33.333 0.00 0.00 0.00 1.47
3219 3659 9.095065 GTGTTCTTTCCATTGTCGTTATATACT 57.905 33.333 0.00 0.00 0.00 2.12
3220 3660 9.661563 TGTTCTTTCCATTGTCGTTATATACTT 57.338 29.630 0.00 0.00 0.00 2.24
3263 3703 6.038382 GGCTGTAGCTATTCCTAACCTTTTTC 59.962 42.308 0.00 0.00 41.70 2.29
3314 3755 6.005823 TCTGTTTCTGGTGATGATGACATTT 58.994 36.000 0.00 0.00 36.82 2.32
3393 3834 2.624636 GGTAGGAACCAATACACGTGG 58.375 52.381 21.57 3.65 45.98 4.94
3405 3846 0.179056 ACACGTGGAGACAACAAGGG 60.179 55.000 21.57 0.00 46.06 3.95
3407 3848 1.227823 CGTGGAGACAACAAGGGCA 60.228 57.895 0.00 0.00 46.06 5.36
3408 3849 0.817634 CGTGGAGACAACAAGGGCAA 60.818 55.000 0.00 0.00 46.06 4.52
3409 3850 1.620822 GTGGAGACAACAAGGGCAAT 58.379 50.000 0.00 0.00 46.06 3.56
3412 3853 2.225091 TGGAGACAACAAGGGCAATGAT 60.225 45.455 0.00 0.00 37.44 2.45
3508 3952 1.972660 AACAGAGCGCCCCTATCACC 61.973 60.000 2.29 0.00 0.00 4.02
3510 3954 4.301027 GAGCGCCCCTATCACCGG 62.301 72.222 2.29 0.00 0.00 5.28
3574 4018 2.882132 TCGCGCCAGATCGAGAAA 59.118 55.556 0.00 0.00 35.48 2.52
3655 4099 2.567615 GGCTAAGAGTGAGAAACAGGGA 59.432 50.000 0.00 0.00 0.00 4.20
3658 4102 4.262678 GCTAAGAGTGAGAAACAGGGACTT 60.263 45.833 0.00 0.00 34.60 3.01
3778 4222 0.032912 AGGGTTGATGGCATGCATGA 60.033 50.000 30.64 10.92 0.00 3.07
3920 4364 1.145803 GTACGGTGGTTGCTTCAGAC 58.854 55.000 0.00 0.00 0.00 3.51
3933 4377 2.349817 GCTTCAGACGGTTGATTGTGTG 60.350 50.000 0.00 0.00 0.00 3.82
3951 4395 2.743664 TGTGTGATGAGAATTGGAAGCG 59.256 45.455 0.00 0.00 0.00 4.68
3954 4398 3.209410 GTGATGAGAATTGGAAGCGGAT 58.791 45.455 0.00 0.00 0.00 4.18
3993 4437 6.638468 CAGTGAAAGTTTTTAGCTCCAACATC 59.362 38.462 0.00 0.00 0.00 3.06
4036 4498 0.911769 CATGTGCCTCCAACCTCCTA 59.088 55.000 0.00 0.00 0.00 2.94
4041 4503 1.338890 GCCTCCAACCTCCTACCCTC 61.339 65.000 0.00 0.00 0.00 4.30
4067 4529 1.545582 CCAAGGTTACACCAGGCAATG 59.454 52.381 0.00 0.00 41.95 2.82
4082 4544 2.483538 GGCAATGGTTTTGCAACAGAGT 60.484 45.455 11.91 0.00 46.58 3.24
4099 4563 7.421599 CAACAGAGTGTATATCTGGTAGAGTG 58.578 42.308 7.77 0.00 42.83 3.51
4101 4565 5.048364 CAGAGTGTATATCTGGTAGAGTGGC 60.048 48.000 0.00 0.00 40.44 5.01
4107 4571 2.203922 TGGTAGAGTGGCAGGCCA 60.204 61.111 9.35 9.35 45.02 5.36
4154 4618 1.986698 AACTGCGCTGCAATTGATTC 58.013 45.000 14.80 0.00 38.41 2.52
4162 4626 3.481028 CGCTGCAATTGATTCTCGAATTG 59.519 43.478 10.34 0.00 40.87 2.32
4249 4713 0.251297 TTTCCATGGTCAGCACTGGG 60.251 55.000 12.58 0.00 0.00 4.45
4282 4746 0.171903 CCAGCTTTTGATTGCTCCCG 59.828 55.000 0.00 0.00 37.44 5.14
4286 4750 2.424956 AGCTTTTGATTGCTCCCGATTC 59.575 45.455 0.00 0.00 33.90 2.52
4358 4822 9.393786 AGTGGTGATAATATATCCTTTGTAGGT 57.606 33.333 0.00 0.00 42.60 3.08
4381 4845 6.478673 GGTTTGGTATAATGTTAAATGGCTGC 59.521 38.462 0.00 0.00 0.00 5.25
4426 4896 0.740737 GAACCCAGCCATTTGATCGG 59.259 55.000 0.00 0.00 0.00 4.18
4440 4910 2.972625 TGATCGGGATCAAACAGTGTC 58.027 47.619 8.84 0.00 44.14 3.67
4446 4916 2.621526 GGGATCAAACAGTGTCGGTTTT 59.378 45.455 0.00 0.00 36.38 2.43
4447 4917 3.304458 GGGATCAAACAGTGTCGGTTTTC 60.304 47.826 0.00 0.00 36.38 2.29
4448 4918 3.314080 GGATCAAACAGTGTCGGTTTTCA 59.686 43.478 0.00 0.00 36.38 2.69
4449 4919 3.750639 TCAAACAGTGTCGGTTTTCAC 57.249 42.857 0.00 0.00 36.38 3.18
4456 4926 4.216687 ACAGTGTCGGTTTTCACAAAAAGA 59.783 37.500 0.00 0.00 35.10 2.52
4457 4927 5.157781 CAGTGTCGGTTTTCACAAAAAGAA 58.842 37.500 0.00 0.00 35.10 2.52
4536 5006 2.556622 ACTAAAACTGCCACCCAAATCG 59.443 45.455 0.00 0.00 0.00 3.34
4549 5019 0.634731 CAAATCGTTCGCAAATGCCG 59.365 50.000 0.00 0.00 37.91 5.69
4572 5042 4.285260 GTCCCCTCCTCTACAACTAAAACA 59.715 45.833 0.00 0.00 0.00 2.83
4573 5043 4.909088 TCCCCTCCTCTACAACTAAAACAA 59.091 41.667 0.00 0.00 0.00 2.83
4574 5044 5.550403 TCCCCTCCTCTACAACTAAAACAAT 59.450 40.000 0.00 0.00 0.00 2.71
4575 5045 6.731919 TCCCCTCCTCTACAACTAAAACAATA 59.268 38.462 0.00 0.00 0.00 1.90
4577 5047 8.053355 CCCCTCCTCTACAACTAAAACAATAAT 58.947 37.037 0.00 0.00 0.00 1.28
4578 5048 8.893727 CCCTCCTCTACAACTAAAACAATAATG 58.106 37.037 0.00 0.00 0.00 1.90
4580 5050 9.167311 CTCCTCTACAACTAAAACAATAATGCT 57.833 33.333 0.00 0.00 0.00 3.79
4601 5071 8.722342 ATGCTAAACATACAAAAAGTTACACG 57.278 30.769 0.00 0.00 37.17 4.49
4603 5073 6.633634 GCTAAACATACAAAAAGTTACACGCA 59.366 34.615 0.00 0.00 0.00 5.24
4604 5074 7.166142 GCTAAACATACAAAAAGTTACACGCAA 59.834 33.333 0.00 0.00 0.00 4.85
4605 5075 7.995463 AAACATACAAAAAGTTACACGCAAT 57.005 28.000 0.00 0.00 0.00 3.56
4606 5076 7.995463 AACATACAAAAAGTTACACGCAATT 57.005 28.000 0.00 0.00 0.00 2.32
4607 5077 9.517609 AAACATACAAAAAGTTACACGCAATTA 57.482 25.926 0.00 0.00 0.00 1.40
4608 5078 9.685828 AACATACAAAAAGTTACACGCAATTAT 57.314 25.926 0.00 0.00 0.00 1.28
4611 5081 7.769719 ACAAAAAGTTACACGCAATTATACG 57.230 32.000 0.00 0.00 0.00 3.06
4612 5082 6.303733 ACAAAAAGTTACACGCAATTATACGC 59.696 34.615 0.00 0.00 0.00 4.42
4613 5083 5.789710 AAAGTTACACGCAATTATACGCT 57.210 34.783 0.00 0.00 0.00 5.07
4614 5084 4.772046 AGTTACACGCAATTATACGCTG 57.228 40.909 0.00 0.00 0.00 5.18
4615 5085 4.426416 AGTTACACGCAATTATACGCTGA 58.574 39.130 0.00 0.00 0.00 4.26
4616 5086 4.266976 AGTTACACGCAATTATACGCTGAC 59.733 41.667 0.00 0.00 0.00 3.51
4617 5087 2.888594 ACACGCAATTATACGCTGACT 58.111 42.857 0.00 0.00 0.00 3.41
4618 5088 4.036567 ACACGCAATTATACGCTGACTA 57.963 40.909 0.00 0.00 0.00 2.59
4619 5089 4.042398 ACACGCAATTATACGCTGACTAG 58.958 43.478 0.00 0.00 0.00 2.57
4620 5090 3.425525 CACGCAATTATACGCTGACTAGG 59.574 47.826 0.00 0.00 0.00 3.02
4621 5091 3.317149 ACGCAATTATACGCTGACTAGGA 59.683 43.478 0.00 0.00 0.00 2.94
4622 5092 4.022242 ACGCAATTATACGCTGACTAGGAT 60.022 41.667 0.00 0.00 0.00 3.24
4623 5093 4.923871 CGCAATTATACGCTGACTAGGATT 59.076 41.667 0.00 0.00 0.00 3.01
4624 5094 5.405571 CGCAATTATACGCTGACTAGGATTT 59.594 40.000 0.00 0.00 0.00 2.17
4625 5095 6.073765 CGCAATTATACGCTGACTAGGATTTT 60.074 38.462 0.00 0.00 0.00 1.82
4626 5096 7.518370 CGCAATTATACGCTGACTAGGATTTTT 60.518 37.037 0.00 0.00 0.00 1.94
4648 5118 8.698973 TTTTTCCATCTACTAACCAATCACAA 57.301 30.769 0.00 0.00 0.00 3.33
4649 5119 8.698973 TTTTCCATCTACTAACCAATCACAAA 57.301 30.769 0.00 0.00 0.00 2.83
4650 5120 7.681939 TTCCATCTACTAACCAATCACAAAC 57.318 36.000 0.00 0.00 0.00 2.93
4651 5121 7.016153 TCCATCTACTAACCAATCACAAACT 57.984 36.000 0.00 0.00 0.00 2.66
4652 5122 7.458397 TCCATCTACTAACCAATCACAAACTT 58.542 34.615 0.00 0.00 0.00 2.66
4653 5123 7.390440 TCCATCTACTAACCAATCACAAACTTG 59.610 37.037 0.00 0.00 0.00 3.16
4654 5124 6.554334 TCTACTAACCAATCACAAACTTGC 57.446 37.500 0.00 0.00 0.00 4.01
4655 5125 4.584327 ACTAACCAATCACAAACTTGCC 57.416 40.909 0.00 0.00 0.00 4.52
4656 5126 4.215109 ACTAACCAATCACAAACTTGCCT 58.785 39.130 0.00 0.00 0.00 4.75
4657 5127 3.733443 AACCAATCACAAACTTGCCTC 57.267 42.857 0.00 0.00 0.00 4.70
4658 5128 1.963515 ACCAATCACAAACTTGCCTCC 59.036 47.619 0.00 0.00 0.00 4.30
4659 5129 1.273327 CCAATCACAAACTTGCCTCCC 59.727 52.381 0.00 0.00 0.00 4.30
4660 5130 1.273327 CAATCACAAACTTGCCTCCCC 59.727 52.381 0.00 0.00 0.00 4.81
4661 5131 0.251787 ATCACAAACTTGCCTCCCCC 60.252 55.000 0.00 0.00 0.00 5.40
4681 5151 2.077687 CTGATTTTCAGGGGGATGGG 57.922 55.000 0.00 0.00 40.71 4.00
4682 5152 0.032217 TGATTTTCAGGGGGATGGGC 60.032 55.000 0.00 0.00 0.00 5.36
4683 5153 0.760567 GATTTTCAGGGGGATGGGCC 60.761 60.000 0.00 0.00 0.00 5.80
4684 5154 2.588029 ATTTTCAGGGGGATGGGCCG 62.588 60.000 0.00 0.00 37.63 6.13
4697 5167 2.930562 GGCCGCCTCCCCATCTAT 60.931 66.667 0.71 0.00 0.00 1.98
4698 5168 2.529744 GGCCGCCTCCCCATCTATT 61.530 63.158 0.71 0.00 0.00 1.73
4699 5169 1.302832 GCCGCCTCCCCATCTATTG 60.303 63.158 0.00 0.00 0.00 1.90
4700 5170 1.768684 GCCGCCTCCCCATCTATTGA 61.769 60.000 0.00 0.00 0.00 2.57
4701 5171 0.035458 CCGCCTCCCCATCTATTGAC 59.965 60.000 0.00 0.00 0.00 3.18
4702 5172 0.035458 CGCCTCCCCATCTATTGACC 59.965 60.000 0.00 0.00 0.00 4.02
4703 5173 1.140312 GCCTCCCCATCTATTGACCA 58.860 55.000 0.00 0.00 0.00 4.02
4704 5174 1.494721 GCCTCCCCATCTATTGACCAA 59.505 52.381 0.00 0.00 0.00 3.67
4705 5175 2.108952 GCCTCCCCATCTATTGACCAAT 59.891 50.000 0.64 0.64 34.93 3.16
4706 5176 3.812167 GCCTCCCCATCTATTGACCAATC 60.812 52.174 0.00 0.00 32.50 2.67
4707 5177 3.395607 CCTCCCCATCTATTGACCAATCA 59.604 47.826 0.00 0.00 32.50 2.57
4722 5192 8.443953 TTGACCAATCAAATTAACCCTTTTTG 57.556 30.769 0.00 0.00 41.99 2.44
4723 5193 7.569240 TGACCAATCAAATTAACCCTTTTTGT 58.431 30.769 0.00 0.00 33.24 2.83
4724 5194 8.705594 TGACCAATCAAATTAACCCTTTTTGTA 58.294 29.630 0.00 0.00 33.24 2.41
4725 5195 9.549078 GACCAATCAAATTAACCCTTTTTGTAA 57.451 29.630 0.00 0.00 33.24 2.41
4726 5196 9.907229 ACCAATCAAATTAACCCTTTTTGTAAA 57.093 25.926 0.00 0.00 33.24 2.01
4731 5201 9.961264 TCAAATTAACCCTTTTTGTAAAACCTT 57.039 25.926 0.00 0.00 33.24 3.50
4732 5202 9.995957 CAAATTAACCCTTTTTGTAAAACCTTG 57.004 29.630 0.00 0.00 0.00 3.61
4733 5203 9.742144 AAATTAACCCTTTTTGTAAAACCTTGT 57.258 25.926 0.00 0.00 0.00 3.16
4736 5206 9.650539 TTAACCCTTTTTGTAAAACCTTGTAAC 57.349 29.630 0.00 0.00 0.00 2.50
4737 5207 7.484993 ACCCTTTTTGTAAAACCTTGTAACT 57.515 32.000 0.00 0.00 0.00 2.24
4738 5208 7.549839 ACCCTTTTTGTAAAACCTTGTAACTC 58.450 34.615 0.00 0.00 0.00 3.01
4739 5209 6.693978 CCCTTTTTGTAAAACCTTGTAACTCG 59.306 38.462 0.00 0.00 0.00 4.18
4740 5210 7.252708 CCTTTTTGTAAAACCTTGTAACTCGT 58.747 34.615 0.00 0.00 0.00 4.18
4741 5211 7.756272 CCTTTTTGTAAAACCTTGTAACTCGTT 59.244 33.333 0.00 0.00 0.00 3.85
4742 5212 9.131416 CTTTTTGTAAAACCTTGTAACTCGTTT 57.869 29.630 0.00 0.00 0.00 3.60
4761 5231 6.430048 CGTTTATACGTGTAGCATTACTCC 57.570 41.667 0.00 0.00 42.72 3.85
4762 5232 5.972973 CGTTTATACGTGTAGCATTACTCCA 59.027 40.000 0.00 0.00 42.72 3.86
4763 5233 6.473131 CGTTTATACGTGTAGCATTACTCCAA 59.527 38.462 0.00 0.00 42.72 3.53
4764 5234 7.514125 CGTTTATACGTGTAGCATTACTCCAAC 60.514 40.741 0.00 0.00 42.72 3.77
4765 5235 3.955650 ACGTGTAGCATTACTCCAACT 57.044 42.857 0.00 0.00 0.00 3.16
4766 5236 6.704289 ATACGTGTAGCATTACTCCAACTA 57.296 37.500 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 6.864685 CGACCTTATCACAAACTACACTACAA 59.135 38.462 0.00 0.00 0.00 2.41
25 26 2.426024 TCAGTAGTGGCGACCTTATCAC 59.574 50.000 0.00 0.00 0.00 3.06
36 37 0.179000 CACCCCATCTCAGTAGTGGC 59.821 60.000 0.00 0.00 0.00 5.01
49 50 2.175931 ACCTAATGTTGTTGTCACCCCA 59.824 45.455 0.00 0.00 0.00 4.96
54 55 5.863965 TCTCATGACCTAATGTTGTTGTCA 58.136 37.500 0.00 0.00 39.95 3.58
55 56 6.801539 TTCTCATGACCTAATGTTGTTGTC 57.198 37.500 0.00 0.00 0.00 3.18
56 57 6.294176 GCTTTCTCATGACCTAATGTTGTTGT 60.294 38.462 0.00 0.00 0.00 3.32
57 58 6.088824 GCTTTCTCATGACCTAATGTTGTTG 58.911 40.000 0.00 0.00 0.00 3.33
58 59 5.769662 TGCTTTCTCATGACCTAATGTTGTT 59.230 36.000 0.00 0.00 0.00 2.83
59 60 5.316167 TGCTTTCTCATGACCTAATGTTGT 58.684 37.500 0.00 0.00 0.00 3.32
77 78 3.244491 TGCAATTACCTGGCATTTGCTTT 60.244 39.130 20.97 0.00 42.34 3.51
80 81 2.383368 TGCAATTACCTGGCATTTGC 57.617 45.000 16.09 16.09 42.23 3.68
85 86 2.689471 GTGATGATGCAATTACCTGGCA 59.311 45.455 0.00 0.00 42.43 4.92
86 87 2.689471 TGTGATGATGCAATTACCTGGC 59.311 45.455 0.00 0.00 0.00 4.85
89 90 2.954318 GGCTGTGATGATGCAATTACCT 59.046 45.455 0.00 0.00 0.00 3.08
120 138 1.132262 GTGGTGGTTTCATACATGGCG 59.868 52.381 0.00 0.00 0.00 5.69
139 157 1.620524 CCCCATTTGGCTGAATGAGGT 60.621 52.381 13.36 0.00 38.93 3.85
155 183 1.836604 GCCAAGGCTTTGAACCCCA 60.837 57.895 10.61 0.00 36.36 4.96
186 214 3.809374 CTCGGATAAGGTGGCGCCC 62.809 68.421 26.77 15.53 38.26 6.13
190 218 1.300233 CGAGCTCGGATAAGGTGGC 60.300 63.158 28.40 0.00 35.37 5.01
215 243 1.002011 GACAAGGACAAGGAGGGGC 60.002 63.158 0.00 0.00 0.00 5.80
240 268 0.106268 TTGCAGTTGGCCTTCCTTCA 60.106 50.000 3.32 0.00 43.89 3.02
262 290 0.813210 GAGGCTTGATGAGAAGGGCG 60.813 60.000 0.00 0.00 0.00 6.13
263 291 0.813210 CGAGGCTTGATGAGAAGGGC 60.813 60.000 0.00 0.00 0.00 5.19
268 296 1.260538 ACCAGCGAGGCTTGATGAGA 61.261 55.000 21.29 0.00 43.14 3.27
275 303 1.893808 CAACACACCAGCGAGGCTT 60.894 57.895 0.00 0.00 43.14 4.35
314 342 1.156736 GCAGTTCATAACAGCGTGGT 58.843 50.000 0.00 0.00 34.21 4.16
319 347 2.286418 GGTATGCGCAGTTCATAACAGC 60.286 50.000 18.32 0.00 40.12 4.40
321 349 2.979240 TGGTATGCGCAGTTCATAACA 58.021 42.857 18.32 9.14 40.60 2.41
323 351 3.605634 ACTTGGTATGCGCAGTTCATAA 58.394 40.909 18.32 5.37 0.00 1.90
329 357 1.372582 CATGACTTGGTATGCGCAGT 58.627 50.000 18.32 6.87 0.00 4.40
393 421 2.636412 CCTTCGTCCTCGAGCACCA 61.636 63.158 6.99 0.00 46.81 4.17
400 428 3.148279 CCCCCTCCTTCGTCCTCG 61.148 72.222 0.00 0.00 38.55 4.63
403 431 3.459063 CGACCCCCTCCTTCGTCC 61.459 72.222 0.00 0.00 0.00 4.79
408 436 4.798682 ATCGCCGACCCCCTCCTT 62.799 66.667 0.00 0.00 0.00 3.36
419 447 4.873129 CTGTCGTCCCCATCGCCG 62.873 72.222 0.00 0.00 0.00 6.46
483 511 1.433534 CTTCTTTCGTCCTCAGGCAC 58.566 55.000 0.00 0.00 0.00 5.01
488 516 0.974383 GACCCCTTCTTTCGTCCTCA 59.026 55.000 0.00 0.00 0.00 3.86
514 542 1.144936 CACTCCGATGCCCTCCTTC 59.855 63.158 0.00 0.00 0.00 3.46
515 543 2.370445 CCACTCCGATGCCCTCCTT 61.370 63.158 0.00 0.00 0.00 3.36
524 552 4.082523 CACCACCGCCACTCCGAT 62.083 66.667 0.00 0.00 0.00 4.18
529 557 3.537206 GAGCTTCACCACCGCCACT 62.537 63.158 0.00 0.00 0.00 4.00
549 577 1.012841 CTACTACGTGTCTCCGTCCC 58.987 60.000 0.00 0.00 42.00 4.46
561 589 1.540797 CCTCCTCGACTCCCTACTACG 60.541 61.905 0.00 0.00 0.00 3.51
563 591 0.473326 GCCTCCTCGACTCCCTACTA 59.527 60.000 0.00 0.00 0.00 1.82
573 601 0.884704 GTTGTTGCTTGCCTCCTCGA 60.885 55.000 0.00 0.00 0.00 4.04
575 603 1.166531 ACGTTGTTGCTTGCCTCCTC 61.167 55.000 0.00 0.00 0.00 3.71
615 643 4.778143 AGAACCGCCATCACCGCC 62.778 66.667 0.00 0.00 0.00 6.13
627 655 0.884704 TCGTTGCAGCAAGGAGAACC 60.885 55.000 23.54 3.24 34.10 3.62
639 667 2.238353 GCTTGAGCTCTTCGTTGCA 58.762 52.632 16.19 0.00 38.21 4.08
653 681 0.804544 TACCGCCGAAATCGAGCTTG 60.805 55.000 4.04 0.00 43.02 4.01
662 690 0.462789 GATTCTCCCTACCGCCGAAA 59.537 55.000 0.00 0.00 0.00 3.46
664 692 2.191513 CGATTCTCCCTACCGCCGA 61.192 63.158 0.00 0.00 0.00 5.54
665 693 2.335369 CGATTCTCCCTACCGCCG 59.665 66.667 0.00 0.00 0.00 6.46
669 697 1.138464 GTCAACCCGATTCTCCCTACC 59.862 57.143 0.00 0.00 0.00 3.18
682 710 2.420022 CCATTCTCATGAACGTCAACCC 59.580 50.000 0.00 0.00 34.71 4.11
686 714 1.628340 ACCCCATTCTCATGAACGTCA 59.372 47.619 0.00 0.00 34.71 4.35
691 719 3.824001 TCCAAACCCCATTCTCATGAA 57.176 42.857 0.00 0.00 36.54 2.57
692 720 3.628002 CCATCCAAACCCCATTCTCATGA 60.628 47.826 0.00 0.00 31.07 3.07
693 721 2.696707 CCATCCAAACCCCATTCTCATG 59.303 50.000 0.00 0.00 0.00 3.07
695 723 1.999295 TCCATCCAAACCCCATTCTCA 59.001 47.619 0.00 0.00 0.00 3.27
721 754 0.959372 CACCCCAGCAGCTCTCAAAG 60.959 60.000 0.00 0.00 0.00 2.77
727 760 3.513750 AAACCCACCCCAGCAGCTC 62.514 63.158 0.00 0.00 0.00 4.09
728 761 1.725169 TAAAACCCACCCCAGCAGCT 61.725 55.000 0.00 0.00 0.00 4.24
731 764 2.380590 AGTTATAAAACCCACCCCAGCA 59.619 45.455 0.00 0.00 36.15 4.41
732 765 2.758423 CAGTTATAAAACCCACCCCAGC 59.242 50.000 0.00 0.00 36.15 4.85
750 783 1.449601 CGATTAGCCCCGTTGCAGT 60.450 57.895 0.00 0.00 0.00 4.40
751 784 2.180204 CCGATTAGCCCCGTTGCAG 61.180 63.158 0.00 0.00 0.00 4.41
752 785 2.124901 CCGATTAGCCCCGTTGCA 60.125 61.111 0.00 0.00 0.00 4.08
758 791 1.119574 TGTCCTAGCCGATTAGCCCC 61.120 60.000 0.00 0.00 0.00 5.80
772 805 0.249398 GGTGTAGCAATCCGTGTCCT 59.751 55.000 0.00 0.00 0.00 3.85
774 807 1.665679 CATGGTGTAGCAATCCGTGTC 59.334 52.381 0.00 0.00 34.62 3.67
775 808 1.277842 TCATGGTGTAGCAATCCGTGT 59.722 47.619 0.00 0.00 38.79 4.49
776 809 2.022764 TCATGGTGTAGCAATCCGTG 57.977 50.000 0.00 0.00 38.98 4.94
777 810 2.779755 TTCATGGTGTAGCAATCCGT 57.220 45.000 0.00 0.00 0.00 4.69
779 812 2.287188 CGCATTCATGGTGTAGCAATCC 60.287 50.000 0.00 0.00 0.00 3.01
780 813 2.855953 GCGCATTCATGGTGTAGCAATC 60.856 50.000 0.30 0.00 0.00 2.67
783 816 1.375853 GGCGCATTCATGGTGTAGCA 61.376 55.000 10.83 0.00 0.00 3.49
784 817 1.356624 GGCGCATTCATGGTGTAGC 59.643 57.895 10.83 3.45 0.00 3.58
786 819 0.179059 ATCGGCGCATTCATGGTGTA 60.179 50.000 10.83 0.00 0.00 2.90
858 894 5.610398 TGAGAATTAGCGCCTCATTTCATA 58.390 37.500 2.29 0.00 32.57 2.15
972 1030 1.953017 CGGCAGGAGTATCGAGGAG 59.047 63.158 0.00 0.00 34.37 3.69
997 1055 0.622665 CTCAGCCTCTTCCCCATGTT 59.377 55.000 0.00 0.00 0.00 2.71
1037 1095 4.969196 ACTGCTGTGTGTCCGCCG 62.969 66.667 0.00 0.00 0.00 6.46
1038 1096 3.044305 GACTGCTGTGTGTCCGCC 61.044 66.667 0.00 0.00 0.00 6.13
1039 1097 3.044305 GGACTGCTGTGTGTCCGC 61.044 66.667 0.00 0.00 42.51 5.54
1042 1100 1.835483 CGCTTGGACTGCTGTGTGTC 61.835 60.000 0.00 0.00 0.00 3.67
1043 1101 1.889105 CGCTTGGACTGCTGTGTGT 60.889 57.895 0.00 0.00 0.00 3.72
1044 1102 0.952497 ATCGCTTGGACTGCTGTGTG 60.952 55.000 0.00 0.00 0.00 3.82
1045 1103 0.671781 GATCGCTTGGACTGCTGTGT 60.672 55.000 0.00 0.00 0.00 3.72
1046 1104 1.364626 GGATCGCTTGGACTGCTGTG 61.365 60.000 0.00 0.00 0.00 3.66
1047 1105 1.078848 GGATCGCTTGGACTGCTGT 60.079 57.895 0.00 0.00 0.00 4.40
1097 1176 1.743855 GAAGGCGTCAATCTCGTCGC 61.744 60.000 0.00 0.00 46.42 5.19
1160 1239 3.312890 GGATCCTCCTTCTCTGGATGAA 58.687 50.000 3.84 0.00 40.33 2.57
1164 1243 0.105964 CCGGATCCTCCTTCTCTGGA 60.106 60.000 10.75 0.00 37.60 3.86
1231 1320 0.038166 TCCTTGCCTTCTTCGCCATT 59.962 50.000 0.00 0.00 0.00 3.16
1294 1383 2.300787 CGTAACTATCTGCGCCCGC 61.301 63.158 4.18 5.60 42.35 6.13
1397 1486 2.099098 CCGCTACCCCAATCAAATTCAC 59.901 50.000 0.00 0.00 0.00 3.18
1501 1616 8.507249 GAAATATTTCACTGACAGCTTACTGTT 58.493 33.333 20.89 0.00 45.47 3.16
1516 1631 8.336498 TCGTCGTCTAATCTGAAATATTTCAC 57.664 34.615 23.86 12.97 41.88 3.18
1522 1637 7.871853 TCATCATCGTCGTCTAATCTGAAATA 58.128 34.615 0.00 0.00 0.00 1.40
1528 1643 5.974158 CACTTTCATCATCGTCGTCTAATCT 59.026 40.000 0.00 0.00 0.00 2.40
1544 1671 3.801698 CCCTCGTCATCATCACTTTCAT 58.198 45.455 0.00 0.00 0.00 2.57
1545 1672 2.677902 GCCCTCGTCATCATCACTTTCA 60.678 50.000 0.00 0.00 0.00 2.69
1546 1673 1.936547 GCCCTCGTCATCATCACTTTC 59.063 52.381 0.00 0.00 0.00 2.62
1547 1674 1.278985 TGCCCTCGTCATCATCACTTT 59.721 47.619 0.00 0.00 0.00 2.66
1548 1675 0.904649 TGCCCTCGTCATCATCACTT 59.095 50.000 0.00 0.00 0.00 3.16
1549 1676 0.904649 TTGCCCTCGTCATCATCACT 59.095 50.000 0.00 0.00 0.00 3.41
1550 1677 1.737838 TTTGCCCTCGTCATCATCAC 58.262 50.000 0.00 0.00 0.00 3.06
1551 1678 2.171237 AGATTTGCCCTCGTCATCATCA 59.829 45.455 0.00 0.00 0.00 3.07
1552 1679 2.843701 AGATTTGCCCTCGTCATCATC 58.156 47.619 0.00 0.00 0.00 2.92
1553 1680 3.805108 GCTAGATTTGCCCTCGTCATCAT 60.805 47.826 0.00 0.00 0.00 2.45
1554 1681 2.483714 GCTAGATTTGCCCTCGTCATCA 60.484 50.000 0.00 0.00 0.00 3.07
1555 1682 2.139118 GCTAGATTTGCCCTCGTCATC 58.861 52.381 0.00 0.00 0.00 2.92
1560 1687 4.576463 AGTAAATTGCTAGATTTGCCCTCG 59.424 41.667 0.00 0.00 33.70 4.63
1616 1743 3.998341 CCCATTCTTTGTCAATTTGGCTG 59.002 43.478 2.24 0.00 0.00 4.85
1717 1885 2.168313 ACAACTTTGGCTTCAACCCTTG 59.832 45.455 0.00 0.00 0.00 3.61
1760 1937 4.818546 CCAATGTCTGCAGGTTTATCCTAG 59.181 45.833 15.13 0.00 46.24 3.02
1766 1943 4.009675 GTCATCCAATGTCTGCAGGTTTA 58.990 43.478 15.13 0.00 0.00 2.01
1958 2136 6.261118 GCAGTTTGGATCATTATCACAAGAC 58.739 40.000 0.00 0.00 33.41 3.01
2035 2218 4.334481 GTGTACTTGCCTGTGTAGTTTTGT 59.666 41.667 0.00 0.00 0.00 2.83
2273 2492 6.648310 CAGTGAGACTTCAGATTTAGCAAGAA 59.352 38.462 0.00 0.00 32.98 2.52
2341 2560 5.743872 GTCCTGATGAAACAAACAACTTGAC 59.256 40.000 0.00 0.00 38.50 3.18
2449 2682 8.335356 CAAATTAGCATAAGTAACAGCACGTAT 58.665 33.333 0.00 0.00 0.00 3.06
2497 2827 3.036091 GGCTGGGTGTAAGGATGTAGTA 58.964 50.000 0.00 0.00 0.00 1.82
2586 2994 8.506168 TCACTTAATAATCCTCAAAATTCGCT 57.494 30.769 0.00 0.00 0.00 4.93
2645 3055 1.072505 GCACCCGAGAAACCTTGGA 59.927 57.895 0.00 0.00 37.39 3.53
2665 3086 4.008074 TGCAGAGTAAGAAAAGTCCCAG 57.992 45.455 0.00 0.00 0.00 4.45
2667 3088 5.278512 CCTTTTGCAGAGTAAGAAAAGTCCC 60.279 44.000 0.00 0.00 34.83 4.46
2831 3267 2.037641 TGATAGGAATGCGGAGATGTGG 59.962 50.000 0.00 0.00 0.00 4.17
2864 3300 7.445402 AGCATCGTTGGCTAGTTCATATTTATT 59.555 33.333 0.00 0.00 40.47 1.40
2901 3337 1.710816 TGACCCAACATTTTGACCCC 58.289 50.000 0.00 0.00 34.24 4.95
3165 3605 4.883083 TCGATAGACAAAGCACAAGAACT 58.117 39.130 0.00 0.00 42.67 3.01
3221 3661 9.354673 AGCTACAGCCATTATAACAACAAATAT 57.645 29.630 0.00 0.00 43.38 1.28
3314 3755 3.055891 TCACCAATCTCATCTCGCTTTGA 60.056 43.478 0.00 0.00 0.00 2.69
3393 3834 3.084039 TCATCATTGCCCTTGTTGTCTC 58.916 45.455 0.00 0.00 0.00 3.36
3405 3846 1.333524 CCGACGCTTCATCATCATTGC 60.334 52.381 0.00 0.00 0.00 3.56
3407 3848 2.159043 ACTCCGACGCTTCATCATCATT 60.159 45.455 0.00 0.00 0.00 2.57
3408 3849 1.410517 ACTCCGACGCTTCATCATCAT 59.589 47.619 0.00 0.00 0.00 2.45
3409 3850 0.817654 ACTCCGACGCTTCATCATCA 59.182 50.000 0.00 0.00 0.00 3.07
3412 3853 0.171231 CAGACTCCGACGCTTCATCA 59.829 55.000 0.00 0.00 0.00 3.07
3515 3959 0.606401 CCTTCGCCTTCTTCTGCCAA 60.606 55.000 0.00 0.00 0.00 4.52
3520 3964 1.484240 CCATCTCCTTCGCCTTCTTCT 59.516 52.381 0.00 0.00 0.00 2.85
3527 3971 0.813210 CTCTTGCCATCTCCTTCGCC 60.813 60.000 0.00 0.00 0.00 5.54
3655 4099 2.907042 CCCCTGACTTCTCCACTTAAGT 59.093 50.000 1.12 1.12 38.62 2.24
3658 4102 1.276622 GCCCCTGACTTCTCCACTTA 58.723 55.000 0.00 0.00 0.00 2.24
3727 4171 4.798288 CGGCTGACGTTCGGATTA 57.202 55.556 0.00 0.00 37.93 1.75
3783 4227 2.197577 CGCAAACGAACCCAAACAAAT 58.802 42.857 0.00 0.00 43.93 2.32
3920 4364 3.066380 TCTCATCACACACAATCAACCG 58.934 45.455 0.00 0.00 0.00 4.44
3933 4377 2.632377 TCCGCTTCCAATTCTCATCAC 58.368 47.619 0.00 0.00 0.00 3.06
3951 4395 4.959596 GAGCCTCGCCTCGCATCC 62.960 72.222 0.00 0.00 0.00 3.51
3993 4437 7.151308 TGAGGCAATTTAACCATAACAACAAG 58.849 34.615 0.00 0.00 0.00 3.16
4004 4448 2.497273 AGGCACATGAGGCAATTTAACC 59.503 45.455 18.44 0.00 36.37 2.85
4005 4449 3.429410 GGAGGCACATGAGGCAATTTAAC 60.429 47.826 18.44 1.79 36.37 2.01
4006 4450 2.760092 GGAGGCACATGAGGCAATTTAA 59.240 45.455 18.44 0.00 36.37 1.52
4007 4451 2.291475 TGGAGGCACATGAGGCAATTTA 60.291 45.455 18.44 0.00 36.37 1.40
4013 4475 2.048603 GGTTGGAGGCACATGAGGC 61.049 63.158 8.70 8.70 0.00 4.70
4067 4529 6.403636 CCAGATATACACTCTGTTGCAAAACC 60.404 42.308 0.00 0.00 38.77 3.27
4082 4544 4.152647 CCTGCCACTCTACCAGATATACA 58.847 47.826 0.00 0.00 0.00 2.29
4107 4571 3.350163 CTGGAATGGGCCCAGGGT 61.350 66.667 31.97 18.22 45.66 4.34
4115 4579 2.441532 CTGCTGGCCTGGAATGGG 60.442 66.667 12.06 0.00 0.00 4.00
4154 4618 4.674662 TGAAAACAAACGCATCAATTCGAG 59.325 37.500 0.00 0.00 0.00 4.04
4162 4626 3.175152 TGTGTGTGAAAACAAACGCATC 58.825 40.909 0.00 0.00 38.89 3.91
4249 4713 2.725221 AGCTGGATCCCACATCTTTC 57.275 50.000 9.90 0.00 0.00 2.62
4282 4746 0.389757 GTACCGGCAGGAGGAGAATC 59.610 60.000 10.86 0.00 41.02 2.52
4286 4750 0.323629 TTTTGTACCGGCAGGAGGAG 59.676 55.000 10.86 0.00 41.02 3.69
4356 4820 6.478673 GCAGCCATTTAACATTATACCAAACC 59.521 38.462 0.00 0.00 0.00 3.27
4358 4822 6.578023 GGCAGCCATTTAACATTATACCAAA 58.422 36.000 6.55 0.00 0.00 3.28
4375 4839 4.641645 CCCAGTGAACGGCAGCCA 62.642 66.667 13.30 0.00 0.00 4.75
4381 4845 2.612221 GGACTTTACTCCCAGTGAACGG 60.612 54.545 0.00 0.00 0.00 4.44
4426 4896 3.314080 TGAAAACCGACACTGTTTGATCC 59.686 43.478 0.00 0.00 36.14 3.36
4439 4909 6.702716 AGGTATTCTTTTTGTGAAAACCGA 57.297 33.333 0.00 0.00 31.72 4.69
4440 4910 6.975772 TGAAGGTATTCTTTTTGTGAAAACCG 59.024 34.615 0.00 0.00 35.50 4.44
4536 5006 2.178273 GGGACGGCATTTGCGAAC 59.822 61.111 0.00 0.00 43.26 3.95
4549 5019 4.285260 TGTTTTAGTTGTAGAGGAGGGGAC 59.715 45.833 0.00 0.00 0.00 4.46
4575 5045 9.176181 CGTGTAACTTTTTGTATGTTTAGCATT 57.824 29.630 0.00 0.00 35.02 3.56
4577 5047 6.633634 GCGTGTAACTTTTTGTATGTTTAGCA 59.366 34.615 0.00 0.00 31.75 3.49
4578 5048 6.633634 TGCGTGTAACTTTTTGTATGTTTAGC 59.366 34.615 0.00 0.00 31.75 3.09
4580 5050 9.517609 AATTGCGTGTAACTTTTTGTATGTTTA 57.482 25.926 0.00 0.00 31.75 2.01
4585 5055 9.480538 CGTATAATTGCGTGTAACTTTTTGTAT 57.519 29.630 0.00 0.00 31.75 2.29
4587 5057 6.303733 GCGTATAATTGCGTGTAACTTTTTGT 59.696 34.615 0.00 0.00 33.09 2.83
4588 5058 6.521821 AGCGTATAATTGCGTGTAACTTTTTG 59.478 34.615 0.00 0.00 35.87 2.44
4589 5059 6.521821 CAGCGTATAATTGCGTGTAACTTTTT 59.478 34.615 0.00 0.00 35.87 1.94
4590 5060 6.019152 CAGCGTATAATTGCGTGTAACTTTT 58.981 36.000 0.00 0.00 35.87 2.27
4594 5064 4.266976 AGTCAGCGTATAATTGCGTGTAAC 59.733 41.667 0.00 0.00 35.87 2.50
4595 5065 4.426416 AGTCAGCGTATAATTGCGTGTAA 58.574 39.130 0.00 0.00 35.87 2.41
4597 5067 2.888594 AGTCAGCGTATAATTGCGTGT 58.111 42.857 0.00 0.00 35.87 4.49
4598 5068 3.425525 CCTAGTCAGCGTATAATTGCGTG 59.574 47.826 0.00 0.00 35.87 5.34
4599 5069 3.317149 TCCTAGTCAGCGTATAATTGCGT 59.683 43.478 0.00 0.00 35.87 5.24
4601 5071 6.787085 AAATCCTAGTCAGCGTATAATTGC 57.213 37.500 0.00 0.00 0.00 3.56
4623 5093 8.698973 TTGTGATTGGTTAGTAGATGGAAAAA 57.301 30.769 0.00 0.00 0.00 1.94
4624 5094 8.573035 GTTTGTGATTGGTTAGTAGATGGAAAA 58.427 33.333 0.00 0.00 0.00 2.29
4625 5095 7.942341 AGTTTGTGATTGGTTAGTAGATGGAAA 59.058 33.333 0.00 0.00 0.00 3.13
4626 5096 7.458397 AGTTTGTGATTGGTTAGTAGATGGAA 58.542 34.615 0.00 0.00 0.00 3.53
4627 5097 7.016153 AGTTTGTGATTGGTTAGTAGATGGA 57.984 36.000 0.00 0.00 0.00 3.41
4628 5098 7.530010 CAAGTTTGTGATTGGTTAGTAGATGG 58.470 38.462 0.00 0.00 0.00 3.51
4629 5099 7.023575 GCAAGTTTGTGATTGGTTAGTAGATG 58.976 38.462 0.00 0.00 0.00 2.90
4630 5100 6.151144 GGCAAGTTTGTGATTGGTTAGTAGAT 59.849 38.462 0.00 0.00 0.00 1.98
4631 5101 5.472137 GGCAAGTTTGTGATTGGTTAGTAGA 59.528 40.000 0.00 0.00 0.00 2.59
4632 5102 5.473504 AGGCAAGTTTGTGATTGGTTAGTAG 59.526 40.000 0.00 0.00 0.00 2.57
4633 5103 5.381757 AGGCAAGTTTGTGATTGGTTAGTA 58.618 37.500 0.00 0.00 0.00 1.82
4634 5104 4.215109 AGGCAAGTTTGTGATTGGTTAGT 58.785 39.130 0.00 0.00 0.00 2.24
4635 5105 4.321230 GGAGGCAAGTTTGTGATTGGTTAG 60.321 45.833 0.00 0.00 0.00 2.34
4636 5106 3.572255 GGAGGCAAGTTTGTGATTGGTTA 59.428 43.478 0.00 0.00 0.00 2.85
4637 5107 2.365293 GGAGGCAAGTTTGTGATTGGTT 59.635 45.455 0.00 0.00 0.00 3.67
4638 5108 1.963515 GGAGGCAAGTTTGTGATTGGT 59.036 47.619 0.00 0.00 0.00 3.67
4639 5109 1.273327 GGGAGGCAAGTTTGTGATTGG 59.727 52.381 0.00 0.00 0.00 3.16
4640 5110 1.273327 GGGGAGGCAAGTTTGTGATTG 59.727 52.381 0.00 0.00 0.00 2.67
4641 5111 1.632589 GGGGAGGCAAGTTTGTGATT 58.367 50.000 0.00 0.00 0.00 2.57
4642 5112 0.251787 GGGGGAGGCAAGTTTGTGAT 60.252 55.000 0.00 0.00 0.00 3.06
4643 5113 1.152830 GGGGGAGGCAAGTTTGTGA 59.847 57.895 0.00 0.00 0.00 3.58
4644 5114 3.777556 GGGGGAGGCAAGTTTGTG 58.222 61.111 0.00 0.00 0.00 3.33
4662 5132 2.031097 GCCCATCCCCCTGAAAATCAG 61.031 57.143 0.32 0.32 43.91 2.90
4663 5133 0.032217 GCCCATCCCCCTGAAAATCA 60.032 55.000 0.00 0.00 0.00 2.57
4664 5134 0.760567 GGCCCATCCCCCTGAAAATC 60.761 60.000 0.00 0.00 0.00 2.17
4665 5135 1.314518 GGCCCATCCCCCTGAAAAT 59.685 57.895 0.00 0.00 0.00 1.82
4666 5136 2.777146 GGCCCATCCCCCTGAAAA 59.223 61.111 0.00 0.00 0.00 2.29
4667 5137 3.738481 CGGCCCATCCCCCTGAAA 61.738 66.667 0.00 0.00 0.00 2.69
4680 5150 2.529744 AATAGATGGGGAGGCGGCC 61.530 63.158 12.11 12.11 0.00 6.13
4681 5151 1.302832 CAATAGATGGGGAGGCGGC 60.303 63.158 0.00 0.00 0.00 6.53
4682 5152 0.035458 GTCAATAGATGGGGAGGCGG 59.965 60.000 0.00 0.00 0.00 6.13
4683 5153 0.035458 GGTCAATAGATGGGGAGGCG 59.965 60.000 0.00 0.00 0.00 5.52
4684 5154 1.140312 TGGTCAATAGATGGGGAGGC 58.860 55.000 0.00 0.00 0.00 4.70
4685 5155 3.395607 TGATTGGTCAATAGATGGGGAGG 59.604 47.826 0.00 0.00 0.00 4.30
4686 5156 4.712051 TGATTGGTCAATAGATGGGGAG 57.288 45.455 0.00 0.00 0.00 4.30
4687 5157 5.464588 TTTGATTGGTCAATAGATGGGGA 57.535 39.130 0.00 0.00 43.49 4.81
4688 5158 6.736110 AATTTGATTGGTCAATAGATGGGG 57.264 37.500 0.00 0.00 43.49 4.96
4689 5159 8.143835 GGTTAATTTGATTGGTCAATAGATGGG 58.856 37.037 0.00 0.00 43.49 4.00
4690 5160 8.143835 GGGTTAATTTGATTGGTCAATAGATGG 58.856 37.037 0.00 0.00 43.49 3.51
4691 5161 8.917088 AGGGTTAATTTGATTGGTCAATAGATG 58.083 33.333 0.00 0.00 43.49 2.90
4692 5162 9.492730 AAGGGTTAATTTGATTGGTCAATAGAT 57.507 29.630 0.00 0.00 43.49 1.98
4693 5163 8.893563 AAGGGTTAATTTGATTGGTCAATAGA 57.106 30.769 0.00 0.00 43.49 1.98
4694 5164 9.942850 AAAAGGGTTAATTTGATTGGTCAATAG 57.057 29.630 0.00 0.00 43.49 1.73
4696 5166 9.065798 CAAAAAGGGTTAATTTGATTGGTCAAT 57.934 29.630 0.00 0.00 43.49 2.57
4697 5167 8.049721 ACAAAAAGGGTTAATTTGATTGGTCAA 58.950 29.630 5.68 0.00 42.41 3.18
4698 5168 7.569240 ACAAAAAGGGTTAATTTGATTGGTCA 58.431 30.769 5.68 0.00 37.46 4.02
4699 5169 9.549078 TTACAAAAAGGGTTAATTTGATTGGTC 57.451 29.630 5.68 0.00 37.46 4.02
4700 5170 9.907229 TTTACAAAAAGGGTTAATTTGATTGGT 57.093 25.926 5.68 0.00 37.46 3.67
4705 5175 9.961264 AAGGTTTTACAAAAAGGGTTAATTTGA 57.039 25.926 5.68 0.00 37.46 2.69
4706 5176 9.995957 CAAGGTTTTACAAAAAGGGTTAATTTG 57.004 29.630 0.00 0.00 39.38 2.32
4707 5177 9.742144 ACAAGGTTTTACAAAAAGGGTTAATTT 57.258 25.926 0.00 0.00 0.00 1.82
4710 5180 9.650539 GTTACAAGGTTTTACAAAAAGGGTTAA 57.349 29.630 0.00 0.00 0.00 2.01
4711 5181 9.033711 AGTTACAAGGTTTTACAAAAAGGGTTA 57.966 29.630 0.00 0.00 0.00 2.85
4712 5182 7.909518 AGTTACAAGGTTTTACAAAAAGGGTT 58.090 30.769 0.00 0.00 0.00 4.11
4713 5183 7.484993 AGTTACAAGGTTTTACAAAAAGGGT 57.515 32.000 0.00 0.00 0.00 4.34
4714 5184 6.693978 CGAGTTACAAGGTTTTACAAAAAGGG 59.306 38.462 0.00 0.00 0.00 3.95
4715 5185 7.252708 ACGAGTTACAAGGTTTTACAAAAAGG 58.747 34.615 0.00 0.00 0.00 3.11
4716 5186 8.677871 AACGAGTTACAAGGTTTTACAAAAAG 57.322 30.769 0.00 0.00 0.00 2.27
4739 5209 7.490402 AGTTGGAGTAATGCTACACGTATAAAC 59.510 37.037 0.00 0.00 37.88 2.01
4740 5210 7.549839 AGTTGGAGTAATGCTACACGTATAAA 58.450 34.615 0.00 0.00 37.88 1.40
4741 5211 7.104043 AGTTGGAGTAATGCTACACGTATAA 57.896 36.000 0.00 0.00 37.88 0.98
4742 5212 6.704289 AGTTGGAGTAATGCTACACGTATA 57.296 37.500 0.00 0.00 37.88 1.47
4743 5213 5.593679 AGTTGGAGTAATGCTACACGTAT 57.406 39.130 0.00 0.00 37.88 3.06
4745 5215 3.955650 AGTTGGAGTAATGCTACACGT 57.044 42.857 0.00 0.00 37.88 4.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.