Multiple sequence alignment - TraesCS5A01G398000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G398000 chr5A 100.000 3764 0 0 1 3764 592197184 592200947 0.000000e+00 6951
1 TraesCS5A01G398000 chr5A 91.323 945 68 5 1047 1984 592122417 592123354 0.000000e+00 1279
2 TraesCS5A01G398000 chr5A 92.408 843 45 8 2001 2843 592124391 592125214 0.000000e+00 1184
3 TraesCS5A01G398000 chr5A 87.117 947 103 11 1045 1989 592034051 592034980 0.000000e+00 1055
4 TraesCS5A01G398000 chr5D 92.849 2615 117 29 265 2843 472626041 472628621 0.000000e+00 3729
5 TraesCS5A01G398000 chr5D 92.178 946 68 1 1045 1984 472568530 472569475 0.000000e+00 1332
6 TraesCS5A01G398000 chr5D 91.392 848 56 11 2001 2843 472570486 472571321 0.000000e+00 1146
7 TraesCS5A01G398000 chr5D 93.499 723 42 4 3041 3762 112053769 112054487 0.000000e+00 1070
8 TraesCS5A01G398000 chr5D 86.961 951 112 6 1045 1989 472520403 472521347 0.000000e+00 1059
9 TraesCS5A01G398000 chr5D 88.830 188 16 3 2843 3030 30728816 30728634 3.780000e-55 226
10 TraesCS5A01G398000 chr5B 94.122 1344 62 11 647 1984 580072852 580074184 0.000000e+00 2028
11 TraesCS5A01G398000 chr5B 92.136 941 74 0 1044 1984 579590938 579591878 0.000000e+00 1328
12 TraesCS5A01G398000 chr5B 91.923 941 76 0 1044 1984 579807424 579808364 0.000000e+00 1317
13 TraesCS5A01G398000 chr5B 93.897 852 39 6 2001 2843 580074442 580075289 0.000000e+00 1273
14 TraesCS5A01G398000 chr5B 91.284 849 56 12 2001 2843 579809488 579810324 0.000000e+00 1142
15 TraesCS5A01G398000 chr5B 93.218 752 34 6 2001 2749 579593654 579594391 0.000000e+00 1090
16 TraesCS5A01G398000 chr5B 86.715 956 108 10 1045 1989 579520137 579521084 0.000000e+00 1044
17 TraesCS5A01G398000 chr5B 84.202 633 99 1 2075 2707 579521509 579522140 6.910000e-172 614
18 TraesCS5A01G398000 chr5B 85.646 209 21 6 2825 3029 462123115 462123318 1.060000e-50 211
19 TraesCS5A01G398000 chr1A 93.251 726 42 4 3036 3759 202083730 202084450 0.000000e+00 1062
20 TraesCS5A01G398000 chr1A 88.421 190 14 5 2840 3025 544732078 544732263 4.890000e-54 222
21 TraesCS5A01G398000 chr2D 92.254 723 50 3 3041 3762 325763509 325762792 0.000000e+00 1020
22 TraesCS5A01G398000 chr2D 92.011 726 51 5 3039 3762 395264690 395263970 0.000000e+00 1013
23 TraesCS5A01G398000 chr1D 91.621 728 52 7 3037 3762 70749160 70748440 0.000000e+00 998
24 TraesCS5A01G398000 chr1D 88.889 189 16 3 2843 3030 373113906 373113722 1.050000e-55 228
25 TraesCS5A01G398000 chr3D 91.551 722 55 4 3042 3762 294349578 294348862 0.000000e+00 990
26 TraesCS5A01G398000 chr3D 91.425 723 54 6 3042 3762 298982372 298983088 0.000000e+00 985
27 TraesCS5A01G398000 chr4A 91.425 723 56 4 3041 3762 519579845 519580562 0.000000e+00 987
28 TraesCS5A01G398000 chr2A 91.413 722 56 4 3042 3762 393191958 393192674 0.000000e+00 985
29 TraesCS5A01G398000 chr4B 78.471 497 102 3 2166 2658 658978363 658978858 1.690000e-83 320
30 TraesCS5A01G398000 chr7A 90.270 185 14 2 2844 3027 707996288 707996107 4.860000e-59 239
31 TraesCS5A01G398000 chr7A 89.840 187 14 4 2843 3027 685223458 685223275 6.290000e-58 235
32 TraesCS5A01G398000 chr7A 89.785 186 14 3 2843 3026 730830675 730830857 2.260000e-57 233
33 TraesCS5A01G398000 chr7A 88.830 188 13 5 2843 3027 702614057 702613875 1.360000e-54 224
34 TraesCS5A01G398000 chr7A 88.298 188 15 4 2844 3029 444984062 444983880 6.330000e-53 219


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G398000 chr5A 592197184 592200947 3763 False 6951.0 6951 100.0000 1 3764 1 chr5A.!!$F2 3763
1 TraesCS5A01G398000 chr5A 592122417 592125214 2797 False 1231.5 1279 91.8655 1047 2843 2 chr5A.!!$F3 1796
2 TraesCS5A01G398000 chr5A 592034051 592034980 929 False 1055.0 1055 87.1170 1045 1989 1 chr5A.!!$F1 944
3 TraesCS5A01G398000 chr5D 472626041 472628621 2580 False 3729.0 3729 92.8490 265 2843 1 chr5D.!!$F3 2578
4 TraesCS5A01G398000 chr5D 472568530 472571321 2791 False 1239.0 1332 91.7850 1045 2843 2 chr5D.!!$F4 1798
5 TraesCS5A01G398000 chr5D 112053769 112054487 718 False 1070.0 1070 93.4990 3041 3762 1 chr5D.!!$F1 721
6 TraesCS5A01G398000 chr5D 472520403 472521347 944 False 1059.0 1059 86.9610 1045 1989 1 chr5D.!!$F2 944
7 TraesCS5A01G398000 chr5B 580072852 580075289 2437 False 1650.5 2028 94.0095 647 2843 2 chr5B.!!$F5 2196
8 TraesCS5A01G398000 chr5B 579807424 579810324 2900 False 1229.5 1317 91.6035 1044 2843 2 chr5B.!!$F4 1799
9 TraesCS5A01G398000 chr5B 579590938 579594391 3453 False 1209.0 1328 92.6770 1044 2749 2 chr5B.!!$F3 1705
10 TraesCS5A01G398000 chr5B 579520137 579522140 2003 False 829.0 1044 85.4585 1045 2707 2 chr5B.!!$F2 1662
11 TraesCS5A01G398000 chr1A 202083730 202084450 720 False 1062.0 1062 93.2510 3036 3759 1 chr1A.!!$F1 723
12 TraesCS5A01G398000 chr2D 325762792 325763509 717 True 1020.0 1020 92.2540 3041 3762 1 chr2D.!!$R1 721
13 TraesCS5A01G398000 chr2D 395263970 395264690 720 True 1013.0 1013 92.0110 3039 3762 1 chr2D.!!$R2 723
14 TraesCS5A01G398000 chr1D 70748440 70749160 720 True 998.0 998 91.6210 3037 3762 1 chr1D.!!$R1 725
15 TraesCS5A01G398000 chr3D 294348862 294349578 716 True 990.0 990 91.5510 3042 3762 1 chr3D.!!$R1 720
16 TraesCS5A01G398000 chr3D 298982372 298983088 716 False 985.0 985 91.4250 3042 3762 1 chr3D.!!$F1 720
17 TraesCS5A01G398000 chr4A 519579845 519580562 717 False 987.0 987 91.4250 3041 3762 1 chr4A.!!$F1 721
18 TraesCS5A01G398000 chr2A 393191958 393192674 716 False 985.0 985 91.4130 3042 3762 1 chr2A.!!$F1 720

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
167 168 0.107268 TCATCCGGCATCAGTGATGG 59.893 55.0 29.66 16.59 40.10 3.51 F
172 173 0.250424 CGGCATCAGTGATGGGCATA 60.250 55.0 29.66 0.00 40.10 3.14 F
374 390 0.391661 CACGTAGGGTGCTGCTTCAT 60.392 55.0 0.00 0.00 40.33 2.57 F
850 878 0.395173 AACAAGGCAAACCACGACCT 60.395 50.0 0.00 0.00 39.06 3.85 F
976 1013 0.459585 ACGCAATATATAGGCCGCCG 60.460 55.0 3.05 0.00 0.00 6.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2072 5016 1.070445 CAGCCCCAAACAAATTCTGCA 59.930 47.619 0.00 0.00 0.0 4.41 R
2073 5017 1.608801 CCAGCCCCAAACAAATTCTGC 60.609 52.381 0.00 0.00 0.0 4.26 R
2181 5125 4.028490 GTCCCCACGGCCACATCA 62.028 66.667 2.24 0.00 0.0 3.07 R
2451 5395 1.227973 GATCATGAACCGCCCCTCC 60.228 63.158 0.00 0.00 0.0 4.30 R
2880 5840 3.378512 TGGGAGCTTAGATGTGACATCT 58.621 45.455 28.69 28.69 0.0 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.200838 TGTATGTATGTGTGTGGAGGTG 57.799 45.455 0.00 0.00 0.00 4.00
22 23 3.580895 TGTATGTATGTGTGTGGAGGTGT 59.419 43.478 0.00 0.00 0.00 4.16
23 24 2.542020 TGTATGTGTGTGGAGGTGTG 57.458 50.000 0.00 0.00 0.00 3.82
24 25 1.765904 TGTATGTGTGTGGAGGTGTGT 59.234 47.619 0.00 0.00 0.00 3.72
25 26 2.143122 GTATGTGTGTGGAGGTGTGTG 58.857 52.381 0.00 0.00 0.00 3.82
26 27 0.546122 ATGTGTGTGGAGGTGTGTGT 59.454 50.000 0.00 0.00 0.00 3.72
27 28 0.392327 TGTGTGTGGAGGTGTGTGTG 60.392 55.000 0.00 0.00 0.00 3.82
28 29 0.392461 GTGTGTGGAGGTGTGTGTGT 60.392 55.000 0.00 0.00 0.00 3.72
29 30 0.392327 TGTGTGGAGGTGTGTGTGTG 60.392 55.000 0.00 0.00 0.00 3.82
30 31 0.392461 GTGTGGAGGTGTGTGTGTGT 60.392 55.000 0.00 0.00 0.00 3.72
31 32 0.392327 TGTGGAGGTGTGTGTGTGTG 60.392 55.000 0.00 0.00 0.00 3.82
32 33 1.095228 GTGGAGGTGTGTGTGTGTGG 61.095 60.000 0.00 0.00 0.00 4.17
33 34 1.525995 GGAGGTGTGTGTGTGTGGG 60.526 63.158 0.00 0.00 0.00 4.61
34 35 1.525995 GAGGTGTGTGTGTGTGGGG 60.526 63.158 0.00 0.00 0.00 4.96
35 36 2.518349 GGTGTGTGTGTGTGGGGG 60.518 66.667 0.00 0.00 0.00 5.40
59 60 9.787435 GGGGGTGTCTTTTATTTTAAGATTTTT 57.213 29.630 0.00 0.00 34.42 1.94
76 77 1.577468 TTTTTGCTTCTCTCGCGTCA 58.423 45.000 5.77 0.00 0.00 4.35
77 78 1.795768 TTTTGCTTCTCTCGCGTCAT 58.204 45.000 5.77 0.00 0.00 3.06
78 79 1.795768 TTTGCTTCTCTCGCGTCATT 58.204 45.000 5.77 0.00 0.00 2.57
79 80 1.070821 TTGCTTCTCTCGCGTCATTG 58.929 50.000 5.77 0.00 0.00 2.82
80 81 0.243636 TGCTTCTCTCGCGTCATTGA 59.756 50.000 5.77 0.00 0.00 2.57
81 82 1.134995 TGCTTCTCTCGCGTCATTGAT 60.135 47.619 5.77 0.00 0.00 2.57
82 83 1.257415 GCTTCTCTCGCGTCATTGATG 59.743 52.381 5.77 1.28 0.00 3.07
83 84 2.802256 CTTCTCTCGCGTCATTGATGA 58.198 47.619 5.77 0.00 0.00 2.92
84 85 2.481903 TCTCTCGCGTCATTGATGAG 57.518 50.000 5.77 6.67 37.51 2.90
85 86 1.745653 TCTCTCGCGTCATTGATGAGT 59.254 47.619 5.77 0.00 37.51 3.41
86 87 2.164422 TCTCTCGCGTCATTGATGAGTT 59.836 45.455 5.77 0.00 37.51 3.01
87 88 2.262211 TCTCGCGTCATTGATGAGTTG 58.738 47.619 5.77 4.94 37.51 3.16
88 89 2.094752 TCTCGCGTCATTGATGAGTTGA 60.095 45.455 5.77 6.93 37.51 3.18
89 90 2.862536 CTCGCGTCATTGATGAGTTGAT 59.137 45.455 5.77 0.00 37.51 2.57
90 91 2.604462 TCGCGTCATTGATGAGTTGATG 59.396 45.455 5.77 0.00 37.51 3.07
91 92 2.286008 CGCGTCATTGATGAGTTGATGG 60.286 50.000 10.09 0.00 37.51 3.51
92 93 2.540361 GCGTCATTGATGAGTTGATGGC 60.540 50.000 10.09 0.00 37.51 4.40
93 94 2.286008 CGTCATTGATGAGTTGATGGCG 60.286 50.000 0.00 0.00 40.53 5.69
94 95 2.938451 GTCATTGATGAGTTGATGGCGA 59.062 45.455 0.00 0.00 37.51 5.54
95 96 2.938451 TCATTGATGAGTTGATGGCGAC 59.062 45.455 0.00 0.00 32.11 5.19
96 97 3.619487 TCATTGATGAGTTGATGGCGACA 60.619 43.478 0.00 0.00 37.19 4.35
97 98 5.102130 TCATTGATGAGTTGATGGCGACAA 61.102 41.667 0.00 0.00 36.64 3.18
98 99 6.377450 TCATTGATGAGTTGATGGCGACAAT 61.377 40.000 0.00 0.00 36.64 2.71
99 100 7.130014 TCATTGATGAGTTGATGGCGACAATA 61.130 38.462 0.00 0.00 36.64 1.90
100 101 8.849236 TCATTGATGAGTTGATGGCGACAATAG 61.849 40.741 0.00 0.00 36.64 1.73
109 110 3.535280 TGGCGACAATAGCATGTTAGA 57.465 42.857 0.00 0.00 37.44 2.10
110 111 3.867857 TGGCGACAATAGCATGTTAGAA 58.132 40.909 0.00 0.00 37.44 2.10
111 112 4.450976 TGGCGACAATAGCATGTTAGAAT 58.549 39.130 0.00 0.00 37.44 2.40
112 113 5.606505 TGGCGACAATAGCATGTTAGAATA 58.393 37.500 0.00 0.00 37.44 1.75
113 114 6.052360 TGGCGACAATAGCATGTTAGAATAA 58.948 36.000 0.00 0.00 37.44 1.40
114 115 6.710295 TGGCGACAATAGCATGTTAGAATAAT 59.290 34.615 0.00 0.00 37.44 1.28
115 116 7.017645 GGCGACAATAGCATGTTAGAATAATG 58.982 38.462 0.00 0.00 36.08 1.90
116 117 7.307989 GGCGACAATAGCATGTTAGAATAATGT 60.308 37.037 0.00 0.00 36.08 2.71
117 118 7.742089 GCGACAATAGCATGTTAGAATAATGTC 59.258 37.037 0.00 0.00 32.57 3.06
118 119 8.982685 CGACAATAGCATGTTAGAATAATGTCT 58.017 33.333 0.00 0.00 32.57 3.41
124 125 8.659925 AGCATGTTAGAATAATGTCTCTTCTG 57.340 34.615 0.00 0.00 31.89 3.02
125 126 8.263640 AGCATGTTAGAATAATGTCTCTTCTGT 58.736 33.333 0.00 0.00 31.89 3.41
126 127 8.547069 GCATGTTAGAATAATGTCTCTTCTGTC 58.453 37.037 0.00 0.00 31.89 3.51
127 128 9.814899 CATGTTAGAATAATGTCTCTTCTGTCT 57.185 33.333 0.00 0.00 31.89 3.41
129 130 9.249053 TGTTAGAATAATGTCTCTTCTGTCTCT 57.751 33.333 0.00 0.00 31.89 3.10
132 133 7.781056 AGAATAATGTCTCTTCTGTCTCTTCC 58.219 38.462 0.00 0.00 0.00 3.46
133 134 7.619302 AGAATAATGTCTCTTCTGTCTCTTCCT 59.381 37.037 0.00 0.00 0.00 3.36
134 135 8.830915 AATAATGTCTCTTCTGTCTCTTCCTA 57.169 34.615 0.00 0.00 0.00 2.94
135 136 6.524101 AATGTCTCTTCTGTCTCTTCCTAC 57.476 41.667 0.00 0.00 0.00 3.18
136 137 4.337145 TGTCTCTTCTGTCTCTTCCTACC 58.663 47.826 0.00 0.00 0.00 3.18
137 138 4.043561 TGTCTCTTCTGTCTCTTCCTACCT 59.956 45.833 0.00 0.00 0.00 3.08
138 139 5.014202 GTCTCTTCTGTCTCTTCCTACCTT 58.986 45.833 0.00 0.00 0.00 3.50
139 140 5.013547 TCTCTTCTGTCTCTTCCTACCTTG 58.986 45.833 0.00 0.00 0.00 3.61
140 141 4.999310 TCTTCTGTCTCTTCCTACCTTGA 58.001 43.478 0.00 0.00 0.00 3.02
141 142 4.767928 TCTTCTGTCTCTTCCTACCTTGAC 59.232 45.833 0.00 0.00 0.00 3.18
142 143 3.082548 TCTGTCTCTTCCTACCTTGACG 58.917 50.000 0.00 0.00 0.00 4.35
143 144 3.082548 CTGTCTCTTCCTACCTTGACGA 58.917 50.000 0.00 0.00 0.00 4.20
144 145 3.697045 CTGTCTCTTCCTACCTTGACGAT 59.303 47.826 0.00 0.00 0.00 3.73
145 146 3.444034 TGTCTCTTCCTACCTTGACGATG 59.556 47.826 0.00 0.00 0.00 3.84
146 147 3.444388 GTCTCTTCCTACCTTGACGATGT 59.556 47.826 0.00 0.00 0.00 3.06
147 148 4.639310 GTCTCTTCCTACCTTGACGATGTA 59.361 45.833 0.00 0.00 0.00 2.29
148 149 5.299782 GTCTCTTCCTACCTTGACGATGTAT 59.700 44.000 0.00 0.00 0.00 2.29
149 150 5.531659 TCTCTTCCTACCTTGACGATGTATC 59.468 44.000 0.00 0.00 0.00 2.24
150 151 5.198207 TCTTCCTACCTTGACGATGTATCA 58.802 41.667 0.00 0.00 0.00 2.15
151 152 5.833667 TCTTCCTACCTTGACGATGTATCAT 59.166 40.000 0.00 0.00 0.00 2.45
152 153 5.707242 TCCTACCTTGACGATGTATCATC 57.293 43.478 0.00 0.25 0.00 2.92
153 154 4.523173 TCCTACCTTGACGATGTATCATCC 59.477 45.833 0.00 0.00 0.00 3.51
154 155 3.371102 ACCTTGACGATGTATCATCCG 57.629 47.619 0.00 0.00 0.00 4.18
155 156 2.035961 ACCTTGACGATGTATCATCCGG 59.964 50.000 0.00 0.00 0.00 5.14
156 157 2.061773 CTTGACGATGTATCATCCGGC 58.938 52.381 0.00 0.00 0.00 6.13
157 158 1.036707 TGACGATGTATCATCCGGCA 58.963 50.000 0.00 0.00 37.75 5.69
158 159 1.618343 TGACGATGTATCATCCGGCAT 59.382 47.619 0.00 0.00 34.86 4.40
159 160 2.263077 GACGATGTATCATCCGGCATC 58.737 52.381 0.00 1.56 35.63 3.91
160 161 1.618343 ACGATGTATCATCCGGCATCA 59.382 47.619 15.07 2.28 38.01 3.07
161 162 2.265683 CGATGTATCATCCGGCATCAG 58.734 52.381 15.07 6.61 38.01 2.90
162 163 2.353109 CGATGTATCATCCGGCATCAGT 60.353 50.000 15.07 0.00 38.01 3.41
163 164 2.531522 TGTATCATCCGGCATCAGTG 57.468 50.000 0.00 0.00 0.00 3.66
164 165 2.038659 TGTATCATCCGGCATCAGTGA 58.961 47.619 0.00 0.00 0.00 3.41
165 166 2.634453 TGTATCATCCGGCATCAGTGAT 59.366 45.455 0.00 0.00 0.00 3.06
166 167 2.180432 ATCATCCGGCATCAGTGATG 57.820 50.000 25.91 25.91 42.37 3.07
167 168 0.107268 TCATCCGGCATCAGTGATGG 59.893 55.000 29.66 16.59 40.10 3.51
168 169 0.887836 CATCCGGCATCAGTGATGGG 60.888 60.000 29.66 23.42 40.10 4.00
169 170 2.687418 ATCCGGCATCAGTGATGGGC 62.687 60.000 29.66 21.52 40.10 5.36
170 171 2.124612 CGGCATCAGTGATGGGCA 60.125 61.111 29.66 0.00 40.10 5.36
171 172 1.527611 CGGCATCAGTGATGGGCAT 60.528 57.895 29.66 0.00 40.10 4.40
172 173 0.250424 CGGCATCAGTGATGGGCATA 60.250 55.000 29.66 0.00 40.10 3.14
173 174 1.612462 CGGCATCAGTGATGGGCATAT 60.612 52.381 29.66 0.00 40.10 1.78
174 175 1.816835 GGCATCAGTGATGGGCATATG 59.183 52.381 29.66 8.32 40.10 1.78
175 176 2.553685 GGCATCAGTGATGGGCATATGA 60.554 50.000 29.66 0.00 40.10 2.15
176 177 2.747989 GCATCAGTGATGGGCATATGAG 59.252 50.000 29.66 5.47 40.10 2.90
177 178 3.558533 GCATCAGTGATGGGCATATGAGA 60.559 47.826 29.66 0.00 40.10 3.27
178 179 4.254492 CATCAGTGATGGGCATATGAGAG 58.746 47.826 23.17 0.00 36.51 3.20
179 180 3.311990 TCAGTGATGGGCATATGAGAGT 58.688 45.455 6.97 0.00 0.00 3.24
180 181 3.713248 TCAGTGATGGGCATATGAGAGTT 59.287 43.478 6.97 0.00 0.00 3.01
181 182 3.813724 CAGTGATGGGCATATGAGAGTTG 59.186 47.826 6.97 0.00 0.00 3.16
182 183 3.144506 GTGATGGGCATATGAGAGTTGG 58.855 50.000 6.97 0.00 0.00 3.77
183 184 2.779430 TGATGGGCATATGAGAGTTGGT 59.221 45.455 6.97 0.00 0.00 3.67
184 185 3.181451 TGATGGGCATATGAGAGTTGGTC 60.181 47.826 6.97 0.00 0.00 4.02
185 186 1.490490 TGGGCATATGAGAGTTGGTCC 59.510 52.381 6.97 0.00 0.00 4.46
186 187 1.202818 GGGCATATGAGAGTTGGTCCC 60.203 57.143 6.97 0.00 0.00 4.46
187 188 1.771255 GGCATATGAGAGTTGGTCCCT 59.229 52.381 6.97 0.00 0.00 4.20
188 189 2.972713 GGCATATGAGAGTTGGTCCCTA 59.027 50.000 6.97 0.00 0.00 3.53
189 190 3.007398 GGCATATGAGAGTTGGTCCCTAG 59.993 52.174 6.97 0.00 0.00 3.02
190 191 3.898123 GCATATGAGAGTTGGTCCCTAGA 59.102 47.826 6.97 0.00 0.00 2.43
191 192 4.530161 GCATATGAGAGTTGGTCCCTAGAT 59.470 45.833 6.97 0.00 0.00 1.98
192 193 5.012561 GCATATGAGAGTTGGTCCCTAGATT 59.987 44.000 6.97 0.00 0.00 2.40
193 194 6.465035 GCATATGAGAGTTGGTCCCTAGATTT 60.465 42.308 6.97 0.00 0.00 2.17
194 195 4.826274 TGAGAGTTGGTCCCTAGATTTG 57.174 45.455 0.00 0.00 0.00 2.32
195 196 4.168101 TGAGAGTTGGTCCCTAGATTTGT 58.832 43.478 0.00 0.00 0.00 2.83
196 197 4.223032 TGAGAGTTGGTCCCTAGATTTGTC 59.777 45.833 0.00 0.00 0.00 3.18
197 198 3.195825 AGAGTTGGTCCCTAGATTTGTCG 59.804 47.826 0.00 0.00 0.00 4.35
198 199 2.236395 AGTTGGTCCCTAGATTTGTCGG 59.764 50.000 0.00 0.00 0.00 4.79
199 200 1.946984 TGGTCCCTAGATTTGTCGGT 58.053 50.000 0.00 0.00 0.00 4.69
200 201 2.262637 TGGTCCCTAGATTTGTCGGTT 58.737 47.619 0.00 0.00 0.00 4.44
201 202 2.235402 TGGTCCCTAGATTTGTCGGTTC 59.765 50.000 0.00 0.00 0.00 3.62
202 203 2.419713 GGTCCCTAGATTTGTCGGTTCC 60.420 54.545 0.00 0.00 0.00 3.62
203 204 1.835531 TCCCTAGATTTGTCGGTTCCC 59.164 52.381 0.00 0.00 0.00 3.97
204 205 1.838077 CCCTAGATTTGTCGGTTCCCT 59.162 52.381 0.00 0.00 0.00 4.20
205 206 2.238898 CCCTAGATTTGTCGGTTCCCTT 59.761 50.000 0.00 0.00 0.00 3.95
206 207 3.532542 CCTAGATTTGTCGGTTCCCTTC 58.467 50.000 0.00 0.00 0.00 3.46
207 208 3.055385 CCTAGATTTGTCGGTTCCCTTCA 60.055 47.826 0.00 0.00 0.00 3.02
208 209 3.059352 AGATTTGTCGGTTCCCTTCAG 57.941 47.619 0.00 0.00 0.00 3.02
209 210 2.637872 AGATTTGTCGGTTCCCTTCAGA 59.362 45.455 0.00 0.00 0.00 3.27
210 211 3.264450 AGATTTGTCGGTTCCCTTCAGAT 59.736 43.478 0.00 0.00 0.00 2.90
211 212 2.762535 TTGTCGGTTCCCTTCAGATC 57.237 50.000 0.00 0.00 0.00 2.75
212 213 1.938585 TGTCGGTTCCCTTCAGATCT 58.061 50.000 0.00 0.00 0.00 2.75
213 214 2.257207 TGTCGGTTCCCTTCAGATCTT 58.743 47.619 0.00 0.00 0.00 2.40
214 215 2.028112 TGTCGGTTCCCTTCAGATCTTG 60.028 50.000 0.00 0.00 0.00 3.02
215 216 1.066143 TCGGTTCCCTTCAGATCTTGC 60.066 52.381 0.00 0.00 0.00 4.01
216 217 1.065854 CGGTTCCCTTCAGATCTTGCT 60.066 52.381 0.00 0.00 0.00 3.91
217 218 2.168521 CGGTTCCCTTCAGATCTTGCTA 59.831 50.000 0.00 0.00 0.00 3.49
218 219 3.739519 CGGTTCCCTTCAGATCTTGCTAG 60.740 52.174 0.00 0.00 0.00 3.42
219 220 3.202097 GTTCCCTTCAGATCTTGCTAGC 58.798 50.000 8.10 8.10 0.00 3.42
220 221 2.756907 TCCCTTCAGATCTTGCTAGCT 58.243 47.619 17.23 0.00 0.00 3.32
221 222 2.697751 TCCCTTCAGATCTTGCTAGCTC 59.302 50.000 17.23 4.84 0.00 4.09
222 223 2.545532 CCCTTCAGATCTTGCTAGCTCG 60.546 54.545 17.23 6.89 0.00 5.03
223 224 2.100584 CCTTCAGATCTTGCTAGCTCGT 59.899 50.000 17.23 0.00 0.00 4.18
224 225 2.859526 TCAGATCTTGCTAGCTCGTG 57.140 50.000 17.23 5.15 0.00 4.35
225 226 2.095461 TCAGATCTTGCTAGCTCGTGT 58.905 47.619 17.23 0.00 0.00 4.49
226 227 2.159324 TCAGATCTTGCTAGCTCGTGTG 60.159 50.000 17.23 8.29 0.00 3.82
227 228 1.821753 AGATCTTGCTAGCTCGTGTGT 59.178 47.619 17.23 0.00 0.00 3.72
228 229 2.159310 AGATCTTGCTAGCTCGTGTGTC 60.159 50.000 17.23 5.25 0.00 3.67
229 230 1.248486 TCTTGCTAGCTCGTGTGTCT 58.752 50.000 17.23 0.00 0.00 3.41
230 231 1.613925 TCTTGCTAGCTCGTGTGTCTT 59.386 47.619 17.23 0.00 0.00 3.01
231 232 2.035961 TCTTGCTAGCTCGTGTGTCTTT 59.964 45.455 17.23 0.00 0.00 2.52
232 233 2.526304 TGCTAGCTCGTGTGTCTTTT 57.474 45.000 17.23 0.00 0.00 2.27
233 234 2.404215 TGCTAGCTCGTGTGTCTTTTC 58.596 47.619 17.23 0.00 0.00 2.29
234 235 2.223947 TGCTAGCTCGTGTGTCTTTTCA 60.224 45.455 17.23 0.00 0.00 2.69
235 236 2.800544 GCTAGCTCGTGTGTCTTTTCAA 59.199 45.455 7.70 0.00 0.00 2.69
236 237 3.120854 GCTAGCTCGTGTGTCTTTTCAAG 60.121 47.826 7.70 0.00 0.00 3.02
237 238 3.179443 AGCTCGTGTGTCTTTTCAAGA 57.821 42.857 0.00 0.00 34.51 3.02
238 239 3.531538 AGCTCGTGTGTCTTTTCAAGAA 58.468 40.909 0.00 0.00 39.67 2.52
239 240 3.557595 AGCTCGTGTGTCTTTTCAAGAAG 59.442 43.478 0.00 0.00 39.67 2.85
240 241 3.555956 GCTCGTGTGTCTTTTCAAGAAGA 59.444 43.478 0.00 0.00 39.67 2.87
241 242 4.318404 GCTCGTGTGTCTTTTCAAGAAGAG 60.318 45.833 0.00 0.00 39.67 2.85
242 243 3.555956 TCGTGTGTCTTTTCAAGAAGAGC 59.444 43.478 0.00 0.00 39.67 4.09
243 244 3.557595 CGTGTGTCTTTTCAAGAAGAGCT 59.442 43.478 0.00 0.00 39.67 4.09
244 245 4.034510 CGTGTGTCTTTTCAAGAAGAGCTT 59.965 41.667 0.00 0.00 39.67 3.74
245 246 5.447818 CGTGTGTCTTTTCAAGAAGAGCTTT 60.448 40.000 0.00 0.00 39.67 3.51
246 247 6.325596 GTGTGTCTTTTCAAGAAGAGCTTTT 58.674 36.000 0.00 0.00 39.67 2.27
247 248 6.252228 GTGTGTCTTTTCAAGAAGAGCTTTTG 59.748 38.462 0.00 0.00 39.67 2.44
248 249 5.745769 GTGTCTTTTCAAGAAGAGCTTTTGG 59.254 40.000 0.00 0.00 39.67 3.28
249 250 4.742167 GTCTTTTCAAGAAGAGCTTTTGGC 59.258 41.667 0.00 0.00 39.67 4.52
250 251 4.646492 TCTTTTCAAGAAGAGCTTTTGGCT 59.354 37.500 0.00 0.00 44.11 4.75
251 252 5.450965 TCTTTTCAAGAAGAGCTTTTGGCTG 60.451 40.000 0.00 0.00 42.54 4.85
252 253 7.581571 TCTTTTCAAGAAGAGCTTTTGGCTGA 61.582 38.462 0.00 0.00 42.54 4.26
253 254 9.491442 TCTTTTCAAGAAGAGCTTTTGGCTGAC 62.491 40.741 0.00 0.00 42.54 3.51
263 264 4.974591 GCTTTTGGCTGACTATTAGTGTG 58.025 43.478 0.00 0.00 38.06 3.82
271 272 4.495422 CTGACTATTAGTGTGGCGACTTT 58.505 43.478 0.00 0.00 0.00 2.66
280 281 2.290641 GTGTGGCGACTTTGACATCTTT 59.709 45.455 0.00 0.00 0.00 2.52
291 292 8.070171 CGACTTTGACATCTTTTTCTATGTTGT 58.930 33.333 0.00 0.00 36.48 3.32
297 298 9.515020 TGACATCTTTTTCTATGTTGTTTTGTC 57.485 29.630 0.00 0.00 36.48 3.18
302 303 8.399425 TCTTTTTCTATGTTGTTTTGTCGCTTA 58.601 29.630 0.00 0.00 0.00 3.09
307 308 3.271729 TGTTGTTTTGTCGCTTAGTCCA 58.728 40.909 0.00 0.00 0.00 4.02
318 319 3.260884 TCGCTTAGTCCAGTTTCTCCAAT 59.739 43.478 0.00 0.00 0.00 3.16
328 329 4.263243 CCAGTTTCTCCAATCCTCTGAACT 60.263 45.833 0.00 0.00 0.00 3.01
329 330 5.046304 CCAGTTTCTCCAATCCTCTGAACTA 60.046 44.000 0.00 0.00 0.00 2.24
330 331 6.467677 CAGTTTCTCCAATCCTCTGAACTAA 58.532 40.000 0.00 0.00 0.00 2.24
344 345 6.065976 TCTGAACTAATGGTGATGGATTGT 57.934 37.500 0.00 0.00 0.00 2.71
346 347 7.805163 TCTGAACTAATGGTGATGGATTGTAT 58.195 34.615 0.00 0.00 0.00 2.29
349 350 5.693961 ACTAATGGTGATGGATTGTATGCA 58.306 37.500 0.00 0.00 34.26 3.96
351 352 7.460910 ACTAATGGTGATGGATTGTATGCATA 58.539 34.615 1.16 1.16 41.66 3.14
353 354 7.786046 AATGGTGATGGATTGTATGCATATT 57.214 32.000 10.16 0.00 41.66 1.28
355 356 5.711506 TGGTGATGGATTGTATGCATATTCC 59.288 40.000 19.06 19.06 41.66 3.01
366 367 1.226746 GCATATTCCACGTAGGGTGC 58.773 55.000 0.00 0.00 45.62 5.01
374 390 0.391661 CACGTAGGGTGCTGCTTCAT 60.392 55.000 0.00 0.00 40.33 2.57
390 406 6.020758 GCTGCTTCATCGATTTATAGATCTCG 60.021 42.308 0.00 0.00 0.00 4.04
399 415 6.935208 TCGATTTATAGATCTCGTCTCAAGGA 59.065 38.462 0.00 0.00 38.42 3.36
425 441 3.492313 CAACTATTGCGGTCTTCAAAGC 58.508 45.455 0.00 0.00 0.00 3.51
426 442 3.059352 ACTATTGCGGTCTTCAAAGCT 57.941 42.857 0.00 0.00 0.00 3.74
428 444 4.575885 ACTATTGCGGTCTTCAAAGCTTA 58.424 39.130 0.00 0.00 0.00 3.09
429 445 4.631813 ACTATTGCGGTCTTCAAAGCTTAG 59.368 41.667 0.00 0.00 0.00 2.18
436 452 5.168569 CGGTCTTCAAAGCTTAGTATGACA 58.831 41.667 0.00 0.00 0.00 3.58
438 454 6.183360 CGGTCTTCAAAGCTTAGTATGACAAG 60.183 42.308 0.00 0.00 0.00 3.16
461 477 1.797348 CGTTTGCAGGTGTCGCTTTTT 60.797 47.619 0.00 0.00 0.00 1.94
476 492 2.388121 CTTTTTCTTGCTGTTGGCTCG 58.612 47.619 0.00 0.00 42.39 5.03
481 497 4.560743 TGCTGTTGGCTCGGTGCA 62.561 61.111 4.30 0.00 45.15 4.57
493 509 3.578688 GCTCGGTGCAATTTTCAATCTT 58.421 40.909 0.00 0.00 42.31 2.40
497 513 4.981674 TCGGTGCAATTTTCAATCTTCAAC 59.018 37.500 0.00 0.00 0.00 3.18
499 515 4.981674 GGTGCAATTTTCAATCTTCAACGA 59.018 37.500 0.00 0.00 0.00 3.85
501 517 5.914635 GTGCAATTTTCAATCTTCAACGAGA 59.085 36.000 0.00 0.00 0.00 4.04
504 520 6.672147 CAATTTTCAATCTTCAACGAGAGGT 58.328 36.000 0.00 0.00 0.00 3.85
515 531 3.172050 CAACGAGAGGTGTACAATCGAG 58.828 50.000 20.91 13.27 45.84 4.04
516 532 2.708051 ACGAGAGGTGTACAATCGAGA 58.292 47.619 20.91 0.00 37.16 4.04
577 597 4.453478 TGACTGTTCTACGTCTGTATTCGT 59.547 41.667 0.00 0.00 42.82 3.85
591 611 7.835066 CGTCTGTATTCGTCTTTATTTTTCTCG 59.165 37.037 0.00 0.00 0.00 4.04
607 635 6.453643 TTTTCTCGATATTAAGCAGATCGC 57.546 37.500 0.00 1.92 41.69 4.58
608 636 4.766404 TCTCGATATTAAGCAGATCGCA 57.234 40.909 11.20 0.00 46.13 5.10
614 642 5.119125 CGATATTAAGCAGATCGCATGTCAA 59.881 40.000 11.20 0.39 46.13 3.18
622 650 7.263100 AGCAGATCGCATGTCAATATTAAAA 57.737 32.000 11.20 0.00 46.13 1.52
623 651 7.706159 AGCAGATCGCATGTCAATATTAAAAA 58.294 30.769 11.20 0.00 46.13 1.94
687 715 3.191162 TGGTGCACATGCTTACTTTCATC 59.809 43.478 20.43 0.00 42.66 2.92
698 726 2.029838 ACTTTCATCGACATGGCTCC 57.970 50.000 0.00 0.00 0.00 4.70
735 763 2.331194 CTTCCAAAGCAAAATGCCTCG 58.669 47.619 0.00 0.00 46.52 4.63
775 803 2.223112 CGGATGCGAATCTCCAGTTTTG 60.223 50.000 0.00 0.00 0.00 2.44
778 806 4.096984 GGATGCGAATCTCCAGTTTTGAAT 59.903 41.667 2.72 0.00 0.00 2.57
841 869 1.435515 GCACGGACAACAAGGCAAA 59.564 52.632 0.00 0.00 0.00 3.68
850 878 0.395173 AACAAGGCAAACCACGACCT 60.395 50.000 0.00 0.00 39.06 3.85
851 879 0.470766 ACAAGGCAAACCACGACCTA 59.529 50.000 0.00 0.00 39.06 3.08
879 907 7.120579 TGCTGTACGAACCAATAATTCTTTCAT 59.879 33.333 0.00 0.00 0.00 2.57
916 944 2.298158 GATCGCCATGGACGTCAGGT 62.298 60.000 18.40 0.00 0.00 4.00
922 950 0.532862 CATGGACGTCAGGTATGGCC 60.533 60.000 18.91 0.00 43.60 5.36
976 1013 0.459585 ACGCAATATATAGGCCGCCG 60.460 55.000 3.05 0.00 0.00 6.46
1036 1076 4.576463 GCACATCACTTCCCCTTATAACAG 59.424 45.833 0.00 0.00 0.00 3.16
1041 1081 7.402071 ACATCACTTCCCCTTATAACAGAGTTA 59.598 37.037 0.00 0.00 0.00 2.24
1051 1091 7.499232 CCCTTATAACAGAGTTAAACCATGGAG 59.501 40.741 21.47 0.00 0.00 3.86
1503 1543 2.104132 CATGTCGGGCGTGATCGA 59.896 61.111 0.00 0.00 39.71 3.59
1762 1808 1.918293 CCTGTGGGACTACCTGCCA 60.918 63.158 0.00 0.00 38.26 4.92
2072 5016 4.142138 ACTCGTTTTCTCACTGAACTCTGT 60.142 41.667 0.00 0.00 33.88 3.41
2073 5017 4.112634 TCGTTTTCTCACTGAACTCTGTG 58.887 43.478 9.72 9.72 44.10 3.66
2184 5128 2.590007 GCGCAGGCCGAGATTGAT 60.590 61.111 0.30 0.00 40.02 2.57
2186 5130 1.522355 CGCAGGCCGAGATTGATGT 60.522 57.895 0.00 0.00 40.02 3.06
2451 5395 3.755628 TTCGAGGACGGGAAGGCG 61.756 66.667 0.00 0.00 40.21 5.52
2755 5705 2.357952 TGGCGTGCTGATGTAGTAGTAG 59.642 50.000 0.00 0.00 0.00 2.57
2756 5706 2.358267 GGCGTGCTGATGTAGTAGTAGT 59.642 50.000 0.00 0.00 0.00 2.73
2757 5707 3.562973 GGCGTGCTGATGTAGTAGTAGTA 59.437 47.826 0.00 0.00 0.00 1.82
2835 5795 2.318908 ACAGGTACGTGTCAGGGTTTA 58.681 47.619 15.24 0.00 0.00 2.01
2836 5796 2.901839 ACAGGTACGTGTCAGGGTTTAT 59.098 45.455 15.24 0.00 0.00 1.40
2837 5797 3.259064 CAGGTACGTGTCAGGGTTTATG 58.741 50.000 7.41 0.00 0.00 1.90
2838 5798 2.901839 AGGTACGTGTCAGGGTTTATGT 59.098 45.455 0.00 0.00 0.00 2.29
2840 5800 4.527816 AGGTACGTGTCAGGGTTTATGTAA 59.472 41.667 0.00 0.00 0.00 2.41
2841 5801 4.866486 GGTACGTGTCAGGGTTTATGTAAG 59.134 45.833 0.00 0.00 0.00 2.34
2842 5802 4.877378 ACGTGTCAGGGTTTATGTAAGA 57.123 40.909 0.00 0.00 0.00 2.10
2843 5803 4.563061 ACGTGTCAGGGTTTATGTAAGAC 58.437 43.478 0.00 0.00 0.00 3.01
2844 5804 4.039488 ACGTGTCAGGGTTTATGTAAGACA 59.961 41.667 0.00 0.00 32.70 3.41
2845 5805 4.625742 CGTGTCAGGGTTTATGTAAGACAG 59.374 45.833 0.00 0.00 35.48 3.51
2846 5806 5.548406 GTGTCAGGGTTTATGTAAGACAGT 58.452 41.667 0.00 0.00 35.48 3.55
2847 5807 5.995897 GTGTCAGGGTTTATGTAAGACAGTT 59.004 40.000 0.00 0.00 35.48 3.16
2848 5808 6.485648 GTGTCAGGGTTTATGTAAGACAGTTT 59.514 38.462 0.00 0.00 35.48 2.66
2849 5809 6.485313 TGTCAGGGTTTATGTAAGACAGTTTG 59.515 38.462 0.00 0.00 31.63 2.93
2850 5810 6.485648 GTCAGGGTTTATGTAAGACAGTTTGT 59.514 38.462 0.00 0.00 0.00 2.83
2866 5826 8.764524 GACAGTTTGTCTAATTCACATCTACT 57.235 34.615 2.08 0.00 43.73 2.57
2867 5827 9.856488 GACAGTTTGTCTAATTCACATCTACTA 57.144 33.333 2.08 0.00 43.73 1.82
2868 5828 9.862371 ACAGTTTGTCTAATTCACATCTACTAG 57.138 33.333 0.00 0.00 0.00 2.57
2887 5847 9.475620 TCTACTAGATGTTTCCTAAAGATGTCA 57.524 33.333 0.00 0.00 0.00 3.58
2888 5848 9.522804 CTACTAGATGTTTCCTAAAGATGTCAC 57.477 37.037 0.00 0.00 0.00 3.67
2889 5849 7.907389 ACTAGATGTTTCCTAAAGATGTCACA 58.093 34.615 0.00 0.00 0.00 3.58
2890 5850 8.543774 ACTAGATGTTTCCTAAAGATGTCACAT 58.456 33.333 0.00 0.00 0.00 3.21
2891 5851 7.856145 AGATGTTTCCTAAAGATGTCACATC 57.144 36.000 10.05 10.05 39.62 3.06
2892 5852 7.628234 AGATGTTTCCTAAAGATGTCACATCT 58.372 34.615 15.05 15.05 42.98 2.90
2893 5853 8.762645 AGATGTTTCCTAAAGATGTCACATCTA 58.237 33.333 20.94 5.41 44.89 1.98
2894 5854 9.383519 GATGTTTCCTAAAGATGTCACATCTAA 57.616 33.333 20.94 11.13 37.41 2.10
2895 5855 8.777865 TGTTTCCTAAAGATGTCACATCTAAG 57.222 34.615 20.94 18.98 0.00 2.18
2896 5856 7.334421 TGTTTCCTAAAGATGTCACATCTAAGC 59.666 37.037 20.94 12.80 0.00 3.09
2897 5857 6.798427 TCCTAAAGATGTCACATCTAAGCT 57.202 37.500 20.94 8.49 0.00 3.74
2898 5858 6.810911 TCCTAAAGATGTCACATCTAAGCTC 58.189 40.000 20.94 0.00 0.00 4.09
2899 5859 5.988561 CCTAAAGATGTCACATCTAAGCTCC 59.011 44.000 20.94 0.00 0.00 4.70
2900 5860 4.414337 AAGATGTCACATCTAAGCTCCC 57.586 45.455 20.94 0.00 0.00 4.30
2901 5861 3.378512 AGATGTCACATCTAAGCTCCCA 58.621 45.455 19.29 0.00 0.00 4.37
2902 5862 3.972638 AGATGTCACATCTAAGCTCCCAT 59.027 43.478 19.29 0.00 0.00 4.00
2903 5863 5.150715 AGATGTCACATCTAAGCTCCCATA 58.849 41.667 19.29 0.00 0.00 2.74
2904 5864 5.604231 AGATGTCACATCTAAGCTCCCATAA 59.396 40.000 19.29 0.00 0.00 1.90
2905 5865 5.692115 TGTCACATCTAAGCTCCCATAAA 57.308 39.130 0.00 0.00 0.00 1.40
2906 5866 6.252599 TGTCACATCTAAGCTCCCATAAAT 57.747 37.500 0.00 0.00 0.00 1.40
2907 5867 7.373617 TGTCACATCTAAGCTCCCATAAATA 57.626 36.000 0.00 0.00 0.00 1.40
2908 5868 7.801104 TGTCACATCTAAGCTCCCATAAATAA 58.199 34.615 0.00 0.00 0.00 1.40
2909 5869 8.271458 TGTCACATCTAAGCTCCCATAAATAAA 58.729 33.333 0.00 0.00 0.00 1.40
2910 5870 8.778358 GTCACATCTAAGCTCCCATAAATAAAG 58.222 37.037 0.00 0.00 0.00 1.85
2911 5871 7.445402 TCACATCTAAGCTCCCATAAATAAAGC 59.555 37.037 0.00 0.00 0.00 3.51
2912 5872 7.229306 CACATCTAAGCTCCCATAAATAAAGCA 59.771 37.037 0.00 0.00 35.42 3.91
2913 5873 7.446625 ACATCTAAGCTCCCATAAATAAAGCAG 59.553 37.037 0.00 0.00 35.42 4.24
2914 5874 4.926140 AAGCTCCCATAAATAAAGCAGC 57.074 40.909 0.00 0.00 35.42 5.25
2915 5875 3.902218 AGCTCCCATAAATAAAGCAGCA 58.098 40.909 0.00 0.00 35.42 4.41
2916 5876 4.280819 AGCTCCCATAAATAAAGCAGCAA 58.719 39.130 0.00 0.00 35.42 3.91
2917 5877 4.098501 AGCTCCCATAAATAAAGCAGCAAC 59.901 41.667 0.00 0.00 35.42 4.17
2918 5878 4.142182 GCTCCCATAAATAAAGCAGCAACA 60.142 41.667 0.00 0.00 33.21 3.33
2919 5879 5.624281 GCTCCCATAAATAAAGCAGCAACAA 60.624 40.000 0.00 0.00 33.21 2.83
2920 5880 6.352016 TCCCATAAATAAAGCAGCAACAAA 57.648 33.333 0.00 0.00 0.00 2.83
2921 5881 6.763355 TCCCATAAATAAAGCAGCAACAAAA 58.237 32.000 0.00 0.00 0.00 2.44
2922 5882 7.220030 TCCCATAAATAAAGCAGCAACAAAAA 58.780 30.769 0.00 0.00 0.00 1.94
2978 5938 9.830186 AGACTATAAACATAGTGGATATCAGGT 57.170 33.333 4.83 0.00 37.48 4.00
2983 5943 7.691993 AAACATAGTGGATATCAGGTTAGGT 57.308 36.000 4.83 0.00 0.00 3.08
2984 5944 6.672266 ACATAGTGGATATCAGGTTAGGTG 57.328 41.667 4.83 0.00 0.00 4.00
2985 5945 6.143915 ACATAGTGGATATCAGGTTAGGTGT 58.856 40.000 4.83 0.00 0.00 4.16
2986 5946 6.042093 ACATAGTGGATATCAGGTTAGGTGTG 59.958 42.308 4.83 0.00 0.00 3.82
2987 5947 4.620723 AGTGGATATCAGGTTAGGTGTGA 58.379 43.478 4.83 0.00 0.00 3.58
2988 5948 4.406003 AGTGGATATCAGGTTAGGTGTGAC 59.594 45.833 4.83 0.00 0.00 3.67
2989 5949 4.161565 GTGGATATCAGGTTAGGTGTGACA 59.838 45.833 4.83 0.00 0.00 3.58
2990 5950 4.968719 TGGATATCAGGTTAGGTGTGACAT 59.031 41.667 4.83 0.00 0.00 3.06
2991 5951 6.041637 GTGGATATCAGGTTAGGTGTGACATA 59.958 42.308 4.83 0.00 0.00 2.29
2992 5952 6.613679 TGGATATCAGGTTAGGTGTGACATAA 59.386 38.462 4.83 0.00 0.00 1.90
2993 5953 6.929606 GGATATCAGGTTAGGTGTGACATAAC 59.070 42.308 4.83 3.30 42.61 1.89
2994 5954 7.202011 GGATATCAGGTTAGGTGTGACATAACT 60.202 40.741 4.83 0.00 42.84 2.24
2995 5955 8.777578 ATATCAGGTTAGGTGTGACATAACTA 57.222 34.615 10.17 0.00 42.84 2.24
2996 5956 7.676683 ATCAGGTTAGGTGTGACATAACTAT 57.323 36.000 10.17 1.84 42.84 2.12
2997 5957 6.873997 TCAGGTTAGGTGTGACATAACTATG 58.126 40.000 10.17 9.54 42.84 2.23
3025 5985 5.916661 TCTAGATGTGTCCTAAACAGACC 57.083 43.478 0.00 0.00 38.97 3.85
3026 5986 3.983044 AGATGTGTCCTAAACAGACCC 57.017 47.619 0.00 0.00 38.97 4.46
3027 5987 3.521727 AGATGTGTCCTAAACAGACCCT 58.478 45.455 0.00 0.00 38.97 4.34
3028 5988 3.910627 AGATGTGTCCTAAACAGACCCTT 59.089 43.478 0.00 0.00 38.97 3.95
3029 5989 4.351111 AGATGTGTCCTAAACAGACCCTTT 59.649 41.667 0.00 0.00 38.97 3.11
3030 5990 3.815809 TGTGTCCTAAACAGACCCTTTG 58.184 45.455 0.00 0.00 38.97 2.77
3031 5991 3.201266 TGTGTCCTAAACAGACCCTTTGT 59.799 43.478 0.00 0.00 38.97 2.83
3032 5992 4.409574 TGTGTCCTAAACAGACCCTTTGTA 59.590 41.667 0.00 0.00 38.97 2.41
3033 5993 5.104444 TGTGTCCTAAACAGACCCTTTGTAA 60.104 40.000 0.00 0.00 38.97 2.41
3034 5994 5.469084 GTGTCCTAAACAGACCCTTTGTAAG 59.531 44.000 0.00 0.00 38.97 2.34
3035 5995 5.367352 TGTCCTAAACAGACCCTTTGTAAGA 59.633 40.000 0.00 0.00 33.09 2.10
3036 5996 6.126710 TGTCCTAAACAGACCCTTTGTAAGAA 60.127 38.462 0.00 0.00 33.09 2.52
3037 5997 6.204301 GTCCTAAACAGACCCTTTGTAAGAAC 59.796 42.308 0.00 0.00 0.00 3.01
3119 6080 2.298446 TCATGGAAAAATGCCTTTGCGA 59.702 40.909 0.00 0.00 41.78 5.10
3151 6112 4.641645 CCGCAGTTGCAGACCCCA 62.642 66.667 4.84 0.00 42.21 4.96
3249 6211 0.673956 GCTCCTCCTGACCCGAAAAC 60.674 60.000 0.00 0.00 0.00 2.43
3285 6247 9.632638 ACACCTTAATTTGATCTAGCATAATGT 57.367 29.630 0.00 0.00 0.00 2.71
3463 6426 4.157472 TGCATTCATTGTTTATCTGCGGAA 59.843 37.500 0.00 0.00 0.00 4.30
3471 6434 5.991328 TGTTTATCTGCGGAATCTTGATC 57.009 39.130 0.00 0.00 0.00 2.92
3496 6459 8.295288 TCTTGCATTCTTCTTTCTTCATCTTTC 58.705 33.333 0.00 0.00 0.00 2.62
3646 6609 7.173735 GGTCTTCCAAAAATCAAAATGAGCATT 59.826 33.333 0.00 0.00 0.00 3.56
3678 6641 5.518848 ACACAAAAGAATGAGCATGTTCA 57.481 34.783 15.01 15.01 0.00 3.18
3693 6656 7.094075 TGAGCATGTTCAAAGAAATGAGCTATT 60.094 33.333 10.10 0.00 30.15 1.73
3711 6674 6.523840 AGCTATTGCAATTGAACCAAAGAAA 58.476 32.000 22.55 0.00 42.74 2.52
3762 6726 1.664333 TACCCCGTCGTTTTCGCAC 60.664 57.895 0.00 0.00 43.73 5.34
3763 6727 2.086251 TACCCCGTCGTTTTCGCACT 62.086 55.000 0.00 0.00 43.73 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.580895 ACACCTCCACACACATACATACA 59.419 43.478 0.00 0.00 0.00 2.29
1 2 3.932710 CACACCTCCACACACATACATAC 59.067 47.826 0.00 0.00 0.00 2.39
3 4 2.371841 ACACACCTCCACACACATACAT 59.628 45.455 0.00 0.00 0.00 2.29
4 5 1.765904 ACACACCTCCACACACATACA 59.234 47.619 0.00 0.00 0.00 2.29
6 7 1.765904 ACACACACCTCCACACACATA 59.234 47.619 0.00 0.00 0.00 2.29
7 8 0.546122 ACACACACCTCCACACACAT 59.454 50.000 0.00 0.00 0.00 3.21
8 9 0.392327 CACACACACCTCCACACACA 60.392 55.000 0.00 0.00 0.00 3.72
9 10 0.392461 ACACACACACCTCCACACAC 60.392 55.000 0.00 0.00 0.00 3.82
10 11 0.392327 CACACACACACCTCCACACA 60.392 55.000 0.00 0.00 0.00 3.72
11 12 0.392461 ACACACACACACCTCCACAC 60.392 55.000 0.00 0.00 0.00 3.82
12 13 0.392327 CACACACACACACCTCCACA 60.392 55.000 0.00 0.00 0.00 4.17
13 14 1.095228 CCACACACACACACCTCCAC 61.095 60.000 0.00 0.00 0.00 4.02
14 15 1.223211 CCACACACACACACCTCCA 59.777 57.895 0.00 0.00 0.00 3.86
15 16 1.525995 CCCACACACACACACCTCC 60.526 63.158 0.00 0.00 0.00 4.30
16 17 1.525995 CCCCACACACACACACCTC 60.526 63.158 0.00 0.00 0.00 3.85
17 18 2.595095 CCCCACACACACACACCT 59.405 61.111 0.00 0.00 0.00 4.00
18 19 2.518349 CCCCCACACACACACACC 60.518 66.667 0.00 0.00 0.00 4.16
33 34 9.787435 AAAAATCTTAAAATAAAAGACACCCCC 57.213 29.630 0.00 0.00 35.87 5.40
57 58 1.577468 TGACGCGAGAGAAGCAAAAA 58.423 45.000 15.93 0.00 34.19 1.94
58 59 1.795768 ATGACGCGAGAGAAGCAAAA 58.204 45.000 15.93 0.00 34.19 2.44
59 60 1.460743 CAATGACGCGAGAGAAGCAAA 59.539 47.619 15.93 0.00 34.19 3.68
60 61 1.070821 CAATGACGCGAGAGAAGCAA 58.929 50.000 15.93 0.00 34.19 3.91
61 62 0.243636 TCAATGACGCGAGAGAAGCA 59.756 50.000 15.93 0.00 34.19 3.91
62 63 1.257415 CATCAATGACGCGAGAGAAGC 59.743 52.381 15.93 0.00 0.00 3.86
63 64 2.788233 CTCATCAATGACGCGAGAGAAG 59.212 50.000 15.93 0.29 32.50 2.85
64 65 2.164422 ACTCATCAATGACGCGAGAGAA 59.836 45.455 15.93 0.00 32.50 2.87
65 66 1.745653 ACTCATCAATGACGCGAGAGA 59.254 47.619 15.93 3.29 32.50 3.10
66 67 2.200792 ACTCATCAATGACGCGAGAG 57.799 50.000 15.93 8.83 32.50 3.20
67 68 2.094752 TCAACTCATCAATGACGCGAGA 60.095 45.455 15.93 2.47 32.50 4.04
68 69 2.262211 TCAACTCATCAATGACGCGAG 58.738 47.619 15.93 0.00 32.50 5.03
69 70 2.362169 TCAACTCATCAATGACGCGA 57.638 45.000 15.93 0.00 32.50 5.87
70 71 2.286008 CCATCAACTCATCAATGACGCG 60.286 50.000 3.53 3.53 32.50 6.01
71 72 2.540361 GCCATCAACTCATCAATGACGC 60.540 50.000 0.00 0.00 32.50 5.19
72 73 2.286008 CGCCATCAACTCATCAATGACG 60.286 50.000 0.00 0.00 32.50 4.35
73 74 2.938451 TCGCCATCAACTCATCAATGAC 59.062 45.455 0.00 0.00 32.50 3.06
74 75 2.938451 GTCGCCATCAACTCATCAATGA 59.062 45.455 0.00 0.00 35.16 2.57
75 76 2.679336 TGTCGCCATCAACTCATCAATG 59.321 45.455 0.00 0.00 0.00 2.82
76 77 2.989909 TGTCGCCATCAACTCATCAAT 58.010 42.857 0.00 0.00 0.00 2.57
77 78 2.470983 TGTCGCCATCAACTCATCAA 57.529 45.000 0.00 0.00 0.00 2.57
78 79 2.470983 TTGTCGCCATCAACTCATCA 57.529 45.000 0.00 0.00 0.00 3.07
79 80 3.059325 GCTATTGTCGCCATCAACTCATC 60.059 47.826 0.00 0.00 0.00 2.92
80 81 2.874701 GCTATTGTCGCCATCAACTCAT 59.125 45.455 0.00 0.00 0.00 2.90
81 82 2.279741 GCTATTGTCGCCATCAACTCA 58.720 47.619 0.00 0.00 0.00 3.41
82 83 2.279741 TGCTATTGTCGCCATCAACTC 58.720 47.619 0.00 0.00 0.00 3.01
83 84 2.401583 TGCTATTGTCGCCATCAACT 57.598 45.000 0.00 0.00 0.00 3.16
84 85 2.355756 ACATGCTATTGTCGCCATCAAC 59.644 45.455 0.00 0.00 0.00 3.18
85 86 2.642427 ACATGCTATTGTCGCCATCAA 58.358 42.857 0.00 0.00 0.00 2.57
86 87 2.330440 ACATGCTATTGTCGCCATCA 57.670 45.000 0.00 0.00 0.00 3.07
87 88 4.058124 TCTAACATGCTATTGTCGCCATC 58.942 43.478 0.00 0.00 0.00 3.51
88 89 4.071961 TCTAACATGCTATTGTCGCCAT 57.928 40.909 0.00 0.00 0.00 4.40
89 90 3.535280 TCTAACATGCTATTGTCGCCA 57.465 42.857 0.00 0.00 0.00 5.69
90 91 6.539649 TTATTCTAACATGCTATTGTCGCC 57.460 37.500 0.00 0.00 0.00 5.54
91 92 7.576236 ACATTATTCTAACATGCTATTGTCGC 58.424 34.615 0.00 0.00 0.00 5.19
92 93 8.982685 AGACATTATTCTAACATGCTATTGTCG 58.017 33.333 0.00 0.00 35.10 4.35
98 99 9.755804 CAGAAGAGACATTATTCTAACATGCTA 57.244 33.333 0.00 0.00 32.16 3.49
99 100 8.263640 ACAGAAGAGACATTATTCTAACATGCT 58.736 33.333 0.00 0.00 32.16 3.79
100 101 8.430801 ACAGAAGAGACATTATTCTAACATGC 57.569 34.615 0.00 0.00 32.16 4.06
101 102 9.814899 AGACAGAAGAGACATTATTCTAACATG 57.185 33.333 0.00 0.00 32.16 3.21
103 104 9.249053 AGAGACAGAAGAGACATTATTCTAACA 57.751 33.333 0.00 0.00 32.16 2.41
106 107 8.908903 GGAAGAGACAGAAGAGACATTATTCTA 58.091 37.037 0.00 0.00 32.16 2.10
107 108 7.619302 AGGAAGAGACAGAAGAGACATTATTCT 59.381 37.037 0.00 0.00 33.62 2.40
108 109 7.781056 AGGAAGAGACAGAAGAGACATTATTC 58.219 38.462 0.00 0.00 0.00 1.75
109 110 7.732222 AGGAAGAGACAGAAGAGACATTATT 57.268 36.000 0.00 0.00 0.00 1.40
110 111 7.286775 GGTAGGAAGAGACAGAAGAGACATTAT 59.713 40.741 0.00 0.00 0.00 1.28
111 112 6.603997 GGTAGGAAGAGACAGAAGAGACATTA 59.396 42.308 0.00 0.00 0.00 1.90
112 113 5.420739 GGTAGGAAGAGACAGAAGAGACATT 59.579 44.000 0.00 0.00 0.00 2.71
113 114 4.953579 GGTAGGAAGAGACAGAAGAGACAT 59.046 45.833 0.00 0.00 0.00 3.06
114 115 4.043561 AGGTAGGAAGAGACAGAAGAGACA 59.956 45.833 0.00 0.00 0.00 3.41
115 116 4.595986 AGGTAGGAAGAGACAGAAGAGAC 58.404 47.826 0.00 0.00 0.00 3.36
116 117 4.938575 AGGTAGGAAGAGACAGAAGAGA 57.061 45.455 0.00 0.00 0.00 3.10
117 118 5.013547 TCAAGGTAGGAAGAGACAGAAGAG 58.986 45.833 0.00 0.00 0.00 2.85
118 119 4.767928 GTCAAGGTAGGAAGAGACAGAAGA 59.232 45.833 0.00 0.00 0.00 2.87
119 120 4.380023 CGTCAAGGTAGGAAGAGACAGAAG 60.380 50.000 0.00 0.00 0.00 2.85
120 121 3.506455 CGTCAAGGTAGGAAGAGACAGAA 59.494 47.826 0.00 0.00 0.00 3.02
121 122 3.082548 CGTCAAGGTAGGAAGAGACAGA 58.917 50.000 0.00 0.00 0.00 3.41
122 123 3.082548 TCGTCAAGGTAGGAAGAGACAG 58.917 50.000 0.00 0.00 0.00 3.51
123 124 3.150458 TCGTCAAGGTAGGAAGAGACA 57.850 47.619 0.00 0.00 0.00 3.41
124 125 3.444388 ACATCGTCAAGGTAGGAAGAGAC 59.556 47.826 0.00 0.00 0.00 3.36
125 126 3.698289 ACATCGTCAAGGTAGGAAGAGA 58.302 45.455 0.00 0.00 0.00 3.10
126 127 5.299531 TGATACATCGTCAAGGTAGGAAGAG 59.700 44.000 0.00 0.00 0.00 2.85
127 128 5.198207 TGATACATCGTCAAGGTAGGAAGA 58.802 41.667 0.00 0.00 0.00 2.87
128 129 5.515797 TGATACATCGTCAAGGTAGGAAG 57.484 43.478 0.00 0.00 0.00 3.46
129 130 5.010719 GGATGATACATCGTCAAGGTAGGAA 59.989 44.000 12.32 0.00 43.08 3.36
130 131 4.523173 GGATGATACATCGTCAAGGTAGGA 59.477 45.833 12.32 0.00 43.08 2.94
131 132 4.616143 CGGATGATACATCGTCAAGGTAGG 60.616 50.000 12.32 0.00 43.08 3.18
132 133 4.476862 CGGATGATACATCGTCAAGGTAG 58.523 47.826 12.32 0.00 43.08 3.18
133 134 3.254903 CCGGATGATACATCGTCAAGGTA 59.745 47.826 12.32 0.00 43.08 3.08
134 135 2.035961 CCGGATGATACATCGTCAAGGT 59.964 50.000 12.32 0.00 43.08 3.50
135 136 2.677199 CCGGATGATACATCGTCAAGG 58.323 52.381 12.32 10.71 43.08 3.61
136 137 2.061773 GCCGGATGATACATCGTCAAG 58.938 52.381 5.05 6.50 43.08 3.02
137 138 1.410882 TGCCGGATGATACATCGTCAA 59.589 47.619 5.05 0.00 43.08 3.18
138 139 1.036707 TGCCGGATGATACATCGTCA 58.963 50.000 5.05 0.00 43.08 4.35
139 140 2.263077 GATGCCGGATGATACATCGTC 58.737 52.381 5.05 3.26 41.10 4.20
140 141 1.618343 TGATGCCGGATGATACATCGT 59.382 47.619 5.05 0.00 41.43 3.73
141 142 2.265683 CTGATGCCGGATGATACATCG 58.734 52.381 5.05 0.61 41.43 3.84
142 143 2.998670 CACTGATGCCGGATGATACATC 59.001 50.000 5.05 8.18 39.47 3.06
143 144 2.634453 TCACTGATGCCGGATGATACAT 59.366 45.455 5.05 0.00 0.00 2.29
144 145 2.038659 TCACTGATGCCGGATGATACA 58.961 47.619 5.05 0.00 0.00 2.29
145 146 2.820059 TCACTGATGCCGGATGATAC 57.180 50.000 5.05 0.00 0.00 2.24
146 147 2.027837 CCATCACTGATGCCGGATGATA 60.028 50.000 5.05 0.00 39.52 2.15
147 148 1.271217 CCATCACTGATGCCGGATGAT 60.271 52.381 5.05 0.48 39.52 2.45
148 149 0.107268 CCATCACTGATGCCGGATGA 59.893 55.000 5.05 0.00 39.52 2.92
149 150 0.887836 CCCATCACTGATGCCGGATG 60.888 60.000 5.05 0.00 38.59 3.51
150 151 1.453235 CCCATCACTGATGCCGGAT 59.547 57.895 5.05 0.00 38.59 4.18
151 152 2.910360 CCCATCACTGATGCCGGA 59.090 61.111 5.05 0.00 38.59 5.14
152 153 2.903855 GCCCATCACTGATGCCGG 60.904 66.667 12.92 10.78 38.59 6.13
153 154 0.250424 TATGCCCATCACTGATGCCG 60.250 55.000 12.92 6.71 38.59 5.69
154 155 1.816835 CATATGCCCATCACTGATGCC 59.183 52.381 12.92 7.11 38.59 4.40
155 156 2.747989 CTCATATGCCCATCACTGATGC 59.252 50.000 12.92 4.23 38.59 3.91
156 157 4.254492 CTCTCATATGCCCATCACTGATG 58.746 47.826 11.59 11.59 39.52 3.07
157 158 3.908733 ACTCTCATATGCCCATCACTGAT 59.091 43.478 0.00 0.00 0.00 2.90
158 159 3.311990 ACTCTCATATGCCCATCACTGA 58.688 45.455 0.00 0.00 0.00 3.41
159 160 3.766068 ACTCTCATATGCCCATCACTG 57.234 47.619 0.00 0.00 0.00 3.66
160 161 3.181447 CCAACTCTCATATGCCCATCACT 60.181 47.826 0.00 0.00 0.00 3.41
161 162 3.144506 CCAACTCTCATATGCCCATCAC 58.855 50.000 0.00 0.00 0.00 3.06
162 163 2.779430 ACCAACTCTCATATGCCCATCA 59.221 45.455 0.00 0.00 0.00 3.07
163 164 3.406764 GACCAACTCTCATATGCCCATC 58.593 50.000 0.00 0.00 0.00 3.51
164 165 2.107204 GGACCAACTCTCATATGCCCAT 59.893 50.000 0.00 0.00 0.00 4.00
165 166 1.490490 GGACCAACTCTCATATGCCCA 59.510 52.381 0.00 0.00 0.00 5.36
166 167 1.202818 GGGACCAACTCTCATATGCCC 60.203 57.143 0.00 0.00 0.00 5.36
167 168 1.771255 AGGGACCAACTCTCATATGCC 59.229 52.381 0.00 0.00 0.00 4.40
168 169 3.898123 TCTAGGGACCAACTCTCATATGC 59.102 47.826 0.00 0.00 0.00 3.14
169 170 6.678568 AATCTAGGGACCAACTCTCATATG 57.321 41.667 0.00 0.00 0.00 1.78
170 171 6.617371 ACAAATCTAGGGACCAACTCTCATAT 59.383 38.462 0.00 0.00 0.00 1.78
171 172 5.964477 ACAAATCTAGGGACCAACTCTCATA 59.036 40.000 0.00 0.00 0.00 2.15
172 173 4.785376 ACAAATCTAGGGACCAACTCTCAT 59.215 41.667 0.00 0.00 0.00 2.90
173 174 4.168101 ACAAATCTAGGGACCAACTCTCA 58.832 43.478 0.00 0.00 0.00 3.27
174 175 4.678309 CGACAAATCTAGGGACCAACTCTC 60.678 50.000 0.00 0.00 0.00 3.20
175 176 3.195825 CGACAAATCTAGGGACCAACTCT 59.804 47.826 0.00 0.00 0.00 3.24
176 177 3.522553 CGACAAATCTAGGGACCAACTC 58.477 50.000 0.00 0.00 0.00 3.01
177 178 2.236395 CCGACAAATCTAGGGACCAACT 59.764 50.000 0.00 0.00 0.00 3.16
178 179 2.027469 ACCGACAAATCTAGGGACCAAC 60.027 50.000 0.00 0.00 0.00 3.77
179 180 2.262637 ACCGACAAATCTAGGGACCAA 58.737 47.619 0.00 0.00 0.00 3.67
180 181 1.946984 ACCGACAAATCTAGGGACCA 58.053 50.000 0.00 0.00 0.00 4.02
181 182 2.419713 GGAACCGACAAATCTAGGGACC 60.420 54.545 0.00 0.00 0.00 4.46
182 183 2.419713 GGGAACCGACAAATCTAGGGAC 60.420 54.545 0.00 0.00 40.86 4.46
183 184 1.835531 GGGAACCGACAAATCTAGGGA 59.164 52.381 0.00 0.00 40.86 4.20
184 185 2.327200 GGGAACCGACAAATCTAGGG 57.673 55.000 0.00 0.00 40.86 3.53
197 198 7.925392 GAGCTAGCAAGATCTGAAGGGAACC 62.925 52.000 18.83 0.00 41.68 3.62
198 199 3.118445 AGCTAGCAAGATCTGAAGGGAAC 60.118 47.826 18.83 0.00 0.00 3.62
199 200 3.110705 AGCTAGCAAGATCTGAAGGGAA 58.889 45.455 18.83 0.00 0.00 3.97
200 201 2.697751 GAGCTAGCAAGATCTGAAGGGA 59.302 50.000 18.83 0.00 35.20 4.20
201 202 2.545532 CGAGCTAGCAAGATCTGAAGGG 60.546 54.545 18.83 0.00 35.94 3.95
202 203 2.100584 ACGAGCTAGCAAGATCTGAAGG 59.899 50.000 18.83 0.00 35.94 3.46
203 204 3.114809 CACGAGCTAGCAAGATCTGAAG 58.885 50.000 18.83 0.00 35.94 3.02
204 205 2.493675 ACACGAGCTAGCAAGATCTGAA 59.506 45.455 18.83 0.00 35.94 3.02
205 206 2.095461 ACACGAGCTAGCAAGATCTGA 58.905 47.619 18.83 0.00 35.94 3.27
206 207 2.191802 CACACGAGCTAGCAAGATCTG 58.808 52.381 18.83 7.17 35.94 2.90
207 208 1.821753 ACACACGAGCTAGCAAGATCT 59.178 47.619 18.83 0.00 35.94 2.75
208 209 2.159310 AGACACACGAGCTAGCAAGATC 60.159 50.000 18.83 4.44 34.70 2.75
209 210 1.821753 AGACACACGAGCTAGCAAGAT 59.178 47.619 18.83 0.00 0.00 2.40
210 211 1.248486 AGACACACGAGCTAGCAAGA 58.752 50.000 18.83 0.00 0.00 3.02
211 212 2.071688 AAGACACACGAGCTAGCAAG 57.928 50.000 18.83 12.62 0.00 4.01
212 213 2.526304 AAAGACACACGAGCTAGCAA 57.474 45.000 18.83 0.00 0.00 3.91
213 214 2.223947 TGAAAAGACACACGAGCTAGCA 60.224 45.455 18.83 0.00 0.00 3.49
214 215 2.404215 TGAAAAGACACACGAGCTAGC 58.596 47.619 6.62 6.62 0.00 3.42
223 224 9.909177 GCCAAAAGCTCTTCTTGAAAAGACACA 62.909 40.741 0.00 0.00 46.34 3.72
224 225 7.655391 GCCAAAAGCTCTTCTTGAAAAGACAC 61.655 42.308 0.00 0.00 46.34 3.67
225 226 5.679638 GCCAAAAGCTCTTCTTGAAAAGACA 60.680 40.000 0.00 0.00 46.34 3.41
226 227 4.742167 GCCAAAAGCTCTTCTTGAAAAGAC 59.258 41.667 0.00 0.00 46.34 3.01
227 228 4.936891 GCCAAAAGCTCTTCTTGAAAAGA 58.063 39.130 0.00 0.00 45.49 2.52
241 242 4.142600 CCACACTAATAGTCAGCCAAAAGC 60.143 45.833 0.00 0.00 44.25 3.51
242 243 4.142600 GCCACACTAATAGTCAGCCAAAAG 60.143 45.833 0.00 0.00 0.00 2.27
243 244 3.756434 GCCACACTAATAGTCAGCCAAAA 59.244 43.478 0.00 0.00 0.00 2.44
244 245 3.343617 GCCACACTAATAGTCAGCCAAA 58.656 45.455 0.00 0.00 0.00 3.28
245 246 2.676750 CGCCACACTAATAGTCAGCCAA 60.677 50.000 0.00 0.00 0.00 4.52
246 247 1.134818 CGCCACACTAATAGTCAGCCA 60.135 52.381 0.00 0.00 0.00 4.75
247 248 1.136305 TCGCCACACTAATAGTCAGCC 59.864 52.381 0.00 0.00 0.00 4.85
248 249 2.159226 AGTCGCCACACTAATAGTCAGC 60.159 50.000 0.00 0.00 0.00 4.26
249 250 3.784701 AGTCGCCACACTAATAGTCAG 57.215 47.619 0.00 0.00 0.00 3.51
250 251 4.021807 TCAAAGTCGCCACACTAATAGTCA 60.022 41.667 0.00 0.00 0.00 3.41
251 252 4.326548 GTCAAAGTCGCCACACTAATAGTC 59.673 45.833 0.00 0.00 0.00 2.59
252 253 4.243270 GTCAAAGTCGCCACACTAATAGT 58.757 43.478 0.00 0.00 0.00 2.12
253 254 4.242475 TGTCAAAGTCGCCACACTAATAG 58.758 43.478 0.00 0.00 0.00 1.73
254 255 4.260139 TGTCAAAGTCGCCACACTAATA 57.740 40.909 0.00 0.00 0.00 0.98
255 256 3.120321 TGTCAAAGTCGCCACACTAAT 57.880 42.857 0.00 0.00 0.00 1.73
256 257 2.605837 TGTCAAAGTCGCCACACTAA 57.394 45.000 0.00 0.00 0.00 2.24
257 258 2.299013 AGATGTCAAAGTCGCCACACTA 59.701 45.455 0.00 0.00 0.00 2.74
258 259 1.070758 AGATGTCAAAGTCGCCACACT 59.929 47.619 0.00 0.00 0.00 3.55
259 260 1.512926 AGATGTCAAAGTCGCCACAC 58.487 50.000 0.00 0.00 0.00 3.82
260 261 2.254546 AAGATGTCAAAGTCGCCACA 57.745 45.000 0.00 0.00 0.00 4.17
261 262 3.626028 AAAAGATGTCAAAGTCGCCAC 57.374 42.857 0.00 0.00 0.00 5.01
262 263 3.882888 AGAAAAAGATGTCAAAGTCGCCA 59.117 39.130 0.00 0.00 0.00 5.69
263 264 4.489679 AGAAAAAGATGTCAAAGTCGCC 57.510 40.909 0.00 0.00 0.00 5.54
271 272 9.515020 GACAAAACAACATAGAAAAAGATGTCA 57.485 29.630 0.00 0.00 35.21 3.58
280 281 7.254227 ACTAAGCGACAAAACAACATAGAAA 57.746 32.000 0.00 0.00 0.00 2.52
291 292 4.448210 AGAAACTGGACTAAGCGACAAAA 58.552 39.130 0.00 0.00 0.00 2.44
293 294 3.554337 GGAGAAACTGGACTAAGCGACAA 60.554 47.826 0.00 0.00 0.00 3.18
297 298 2.743636 TGGAGAAACTGGACTAAGCG 57.256 50.000 0.00 0.00 0.00 4.68
302 303 3.262915 CAGAGGATTGGAGAAACTGGACT 59.737 47.826 0.00 0.00 0.00 3.85
307 308 6.688073 TTAGTTCAGAGGATTGGAGAAACT 57.312 37.500 0.00 0.00 0.00 2.66
318 319 4.361783 TCCATCACCATTAGTTCAGAGGA 58.638 43.478 0.00 0.00 0.00 3.71
328 329 8.882557 AATATGCATACAATCCATCACCATTA 57.117 30.769 8.99 0.00 0.00 1.90
329 330 7.093640 GGAATATGCATACAATCCATCACCATT 60.094 37.037 21.58 5.91 31.09 3.16
330 331 6.379133 GGAATATGCATACAATCCATCACCAT 59.621 38.462 21.58 0.00 31.09 3.55
344 345 3.556213 GCACCCTACGTGGAATATGCATA 60.556 47.826 9.27 9.27 43.24 3.14
346 347 1.474320 GCACCCTACGTGGAATATGCA 60.474 52.381 0.00 0.00 43.24 3.96
349 350 1.202651 GCAGCACCCTACGTGGAATAT 60.203 52.381 0.00 0.00 43.24 1.28
351 352 1.078426 GCAGCACCCTACGTGGAAT 60.078 57.895 0.00 0.00 43.24 3.01
353 354 2.167398 GAAGCAGCACCCTACGTGGA 62.167 60.000 0.00 0.00 43.24 4.02
355 356 0.391661 ATGAAGCAGCACCCTACGTG 60.392 55.000 0.00 0.00 46.03 4.49
366 367 7.026562 ACGAGATCTATAAATCGATGAAGCAG 58.973 38.462 0.00 0.00 38.50 4.24
374 390 6.935208 TCCTTGAGACGAGATCTATAAATCGA 59.065 38.462 6.78 0.00 38.00 3.59
390 406 3.512033 ATAGTTGCTCGTCCTTGAGAC 57.488 47.619 0.00 0.00 42.54 3.36
425 441 3.181510 GCAAACGCCCTTGTCATACTAAG 60.182 47.826 0.00 0.00 0.00 2.18
426 442 2.745281 GCAAACGCCCTTGTCATACTAA 59.255 45.455 0.00 0.00 0.00 2.24
428 444 1.165270 GCAAACGCCCTTGTCATACT 58.835 50.000 0.00 0.00 0.00 2.12
429 445 0.878416 TGCAAACGCCCTTGTCATAC 59.122 50.000 0.00 0.00 0.00 2.39
436 452 2.123897 ACACCTGCAAACGCCCTT 60.124 55.556 0.00 0.00 0.00 3.95
438 454 4.025401 CGACACCTGCAAACGCCC 62.025 66.667 0.00 0.00 0.00 6.13
476 492 4.981674 TCGTTGAAGATTGAAAATTGCACC 59.018 37.500 0.00 0.00 0.00 5.01
481 497 6.263168 ACACCTCTCGTTGAAGATTGAAAATT 59.737 34.615 0.00 0.00 0.00 1.82
493 509 2.815503 TCGATTGTACACCTCTCGTTGA 59.184 45.455 0.00 0.00 0.00 3.18
497 513 3.759527 TTCTCGATTGTACACCTCTCG 57.240 47.619 0.00 2.55 0.00 4.04
499 515 5.470047 AGTTTTCTCGATTGTACACCTCT 57.530 39.130 0.00 0.00 0.00 3.69
501 517 6.342338 ACTAGTTTTCTCGATTGTACACCT 57.658 37.500 0.00 0.00 0.00 4.00
554 574 4.453478 ACGAATACAGACGTAGAACAGTCA 59.547 41.667 0.00 0.00 40.92 3.41
556 576 4.694509 AGACGAATACAGACGTAGAACAGT 59.305 41.667 0.00 0.00 42.74 3.55
591 611 6.471976 TTGACATGCGATCTGCTTAATATC 57.528 37.500 10.16 0.00 46.63 1.63
599 627 7.912949 TTTTTAATATTGACATGCGATCTGC 57.087 32.000 0.00 3.07 46.70 4.26
623 651 5.824097 AGATGCAGCCATTTTTGTTCTTTTT 59.176 32.000 0.00 0.00 0.00 1.94
624 652 5.237779 CAGATGCAGCCATTTTTGTTCTTTT 59.762 36.000 0.00 0.00 0.00 2.27
625 653 4.753107 CAGATGCAGCCATTTTTGTTCTTT 59.247 37.500 0.00 0.00 0.00 2.52
626 654 4.312443 CAGATGCAGCCATTTTTGTTCTT 58.688 39.130 0.00 0.00 0.00 2.52
627 655 3.863400 GCAGATGCAGCCATTTTTGTTCT 60.863 43.478 0.00 0.00 41.59 3.01
628 656 2.414138 GCAGATGCAGCCATTTTTGTTC 59.586 45.455 0.00 0.00 41.59 3.18
629 657 2.419667 GCAGATGCAGCCATTTTTGTT 58.580 42.857 0.00 0.00 41.59 2.83
630 658 2.088950 GCAGATGCAGCCATTTTTGT 57.911 45.000 0.00 0.00 41.59 2.83
687 715 3.144120 CTCGAGGGGAGCCATGTCG 62.144 68.421 3.91 0.00 35.63 4.35
698 726 0.610687 AAGCAAGGAACTCTCGAGGG 59.389 55.000 11.78 11.78 38.49 4.30
729 757 3.740832 CGCATGATTAGTATTTCGAGGCA 59.259 43.478 0.00 0.00 0.00 4.75
735 763 6.669977 GCATCCGTACGCATGATTAGTATTTC 60.670 42.308 23.01 0.00 0.00 2.17
841 869 1.135199 CGTACAGCAATAGGTCGTGGT 60.135 52.381 0.00 0.00 0.00 4.16
850 878 8.500753 AAGAATTATTGGTTCGTACAGCAATA 57.499 30.769 11.67 11.67 41.90 1.90
851 879 7.391148 AAGAATTATTGGTTCGTACAGCAAT 57.609 32.000 13.25 13.25 44.91 3.56
976 1013 2.282391 TGTGGCACCATCCTGCAC 60.282 61.111 16.26 0.00 39.08 4.57
1036 1076 3.686016 TGCCTTCTCCATGGTTTAACTC 58.314 45.455 12.58 0.00 0.00 3.01
1041 1081 3.737559 TGTATGCCTTCTCCATGGTTT 57.262 42.857 12.58 0.00 0.00 3.27
1177 1217 2.285368 TGGAGGTGGCCGAGGAAT 60.285 61.111 0.00 0.00 0.00 3.01
1597 1643 2.036414 ACGCTGAGGGAGAGCTCA 59.964 61.111 17.77 0.00 34.03 4.26
1762 1808 3.923864 TCGAACCACCGCAGCACT 61.924 61.111 0.00 0.00 0.00 4.40
2072 5016 1.070445 CAGCCCCAAACAAATTCTGCA 59.930 47.619 0.00 0.00 0.00 4.41
2073 5017 1.608801 CCAGCCCCAAACAAATTCTGC 60.609 52.381 0.00 0.00 0.00 4.26
2181 5125 4.028490 GTCCCCACGGCCACATCA 62.028 66.667 2.24 0.00 0.00 3.07
2209 5153 4.986587 CACGTCGTCGGCGGTCAA 62.987 66.667 24.46 0.00 41.85 3.18
2310 5254 4.681978 ACCTTGCAGTCCGCGGAC 62.682 66.667 43.92 43.92 46.97 4.79
2451 5395 1.227973 GATCATGAACCGCCCCTCC 60.228 63.158 0.00 0.00 0.00 4.30
2755 5705 7.699566 TCACACAAGGTCACAAGTTTATTTAC 58.300 34.615 0.00 0.00 0.00 2.01
2756 5706 7.468084 GCTCACACAAGGTCACAAGTTTATTTA 60.468 37.037 0.00 0.00 0.00 1.40
2757 5707 6.680378 GCTCACACAAGGTCACAAGTTTATTT 60.680 38.462 0.00 0.00 0.00 1.40
2842 5802 9.862371 CTAGTAGATGTGAATTAGACAAACTGT 57.138 33.333 0.00 0.00 0.00 3.55
2861 5821 9.475620 TGACATCTTTAGGAAACATCTAGTAGA 57.524 33.333 1.45 1.45 0.00 2.59
2862 5822 9.522804 GTGACATCTTTAGGAAACATCTAGTAG 57.477 37.037 0.00 0.00 0.00 2.57
2863 5823 9.031537 TGTGACATCTTTAGGAAACATCTAGTA 57.968 33.333 0.00 0.00 0.00 1.82
2864 5824 7.907389 TGTGACATCTTTAGGAAACATCTAGT 58.093 34.615 0.00 0.00 0.00 2.57
2865 5825 8.954950 ATGTGACATCTTTAGGAAACATCTAG 57.045 34.615 0.00 0.00 0.00 2.43
2866 5826 8.762645 AGATGTGACATCTTTAGGAAACATCTA 58.237 33.333 21.66 0.00 46.74 1.98
2867 5827 7.628234 AGATGTGACATCTTTAGGAAACATCT 58.372 34.615 21.66 8.71 44.92 2.90
2868 5828 7.856145 AGATGTGACATCTTTAGGAAACATC 57.144 36.000 21.66 0.00 41.77 3.06
2869 5829 9.388506 CTTAGATGTGACATCTTTAGGAAACAT 57.611 33.333 30.49 7.04 0.00 2.71
2870 5830 7.334421 GCTTAGATGTGACATCTTTAGGAAACA 59.666 37.037 30.49 8.92 0.00 2.83
2871 5831 7.550906 AGCTTAGATGTGACATCTTTAGGAAAC 59.449 37.037 30.49 14.89 0.00 2.78
2872 5832 7.624549 AGCTTAGATGTGACATCTTTAGGAAA 58.375 34.615 30.49 17.31 0.00 3.13
2873 5833 7.187824 AGCTTAGATGTGACATCTTTAGGAA 57.812 36.000 30.49 17.95 0.00 3.36
2874 5834 6.183360 GGAGCTTAGATGTGACATCTTTAGGA 60.183 42.308 30.49 11.78 0.00 2.94
2875 5835 5.988561 GGAGCTTAGATGTGACATCTTTAGG 59.011 44.000 30.49 16.42 0.00 2.69
2876 5836 5.988561 GGGAGCTTAGATGTGACATCTTTAG 59.011 44.000 30.49 25.79 0.00 1.85
2877 5837 5.425217 TGGGAGCTTAGATGTGACATCTTTA 59.575 40.000 30.49 18.53 0.00 1.85
2878 5838 4.225942 TGGGAGCTTAGATGTGACATCTTT 59.774 41.667 30.49 15.32 0.00 2.52
2879 5839 3.776969 TGGGAGCTTAGATGTGACATCTT 59.223 43.478 30.49 14.69 0.00 2.40
2880 5840 3.378512 TGGGAGCTTAGATGTGACATCT 58.621 45.455 28.69 28.69 0.00 2.90
2881 5841 3.827008 TGGGAGCTTAGATGTGACATC 57.173 47.619 17.46 17.46 0.00 3.06
2882 5842 5.894298 TTATGGGAGCTTAGATGTGACAT 57.106 39.130 0.00 0.00 0.00 3.06
2883 5843 5.692115 TTTATGGGAGCTTAGATGTGACA 57.308 39.130 0.00 0.00 0.00 3.58
2884 5844 8.677148 TTTATTTATGGGAGCTTAGATGTGAC 57.323 34.615 0.00 0.00 0.00 3.67
2885 5845 7.445402 GCTTTATTTATGGGAGCTTAGATGTGA 59.555 37.037 0.00 0.00 0.00 3.58
2886 5846 7.229306 TGCTTTATTTATGGGAGCTTAGATGTG 59.771 37.037 0.00 0.00 34.56 3.21
2887 5847 7.290061 TGCTTTATTTATGGGAGCTTAGATGT 58.710 34.615 0.00 0.00 34.56 3.06
2888 5848 7.574592 GCTGCTTTATTTATGGGAGCTTAGATG 60.575 40.741 0.00 0.00 39.45 2.90
2889 5849 6.432472 GCTGCTTTATTTATGGGAGCTTAGAT 59.568 38.462 0.00 0.00 39.45 1.98
2890 5850 5.765182 GCTGCTTTATTTATGGGAGCTTAGA 59.235 40.000 0.00 0.00 39.45 2.10
2891 5851 5.532406 TGCTGCTTTATTTATGGGAGCTTAG 59.468 40.000 0.00 0.00 42.23 2.18
2892 5852 5.445069 TGCTGCTTTATTTATGGGAGCTTA 58.555 37.500 0.00 0.00 42.23 3.09
2893 5853 4.280819 TGCTGCTTTATTTATGGGAGCTT 58.719 39.130 0.00 0.00 42.23 3.74
2894 5854 3.902218 TGCTGCTTTATTTATGGGAGCT 58.098 40.909 0.00 0.00 42.23 4.09
2895 5855 4.142182 TGTTGCTGCTTTATTTATGGGAGC 60.142 41.667 0.00 0.00 42.11 4.70
2896 5856 5.581126 TGTTGCTGCTTTATTTATGGGAG 57.419 39.130 0.00 0.00 0.00 4.30
2897 5857 5.991933 TTGTTGCTGCTTTATTTATGGGA 57.008 34.783 0.00 0.00 0.00 4.37
2898 5858 7.432350 TTTTTGTTGCTGCTTTATTTATGGG 57.568 32.000 0.00 0.00 0.00 4.00
2952 5912 9.830186 ACCTGATATCCACTATGTTTATAGTCT 57.170 33.333 0.00 0.00 44.83 3.24
2957 5917 9.393786 ACCTAACCTGATATCCACTATGTTTAT 57.606 33.333 0.00 0.00 0.00 1.40
2958 5918 8.647796 CACCTAACCTGATATCCACTATGTTTA 58.352 37.037 0.00 0.00 0.00 2.01
2959 5919 7.127339 ACACCTAACCTGATATCCACTATGTTT 59.873 37.037 0.00 0.00 0.00 2.83
2960 5920 6.615726 ACACCTAACCTGATATCCACTATGTT 59.384 38.462 0.00 0.00 0.00 2.71
2961 5921 6.042093 CACACCTAACCTGATATCCACTATGT 59.958 42.308 0.00 0.00 0.00 2.29
2962 5922 6.267699 TCACACCTAACCTGATATCCACTATG 59.732 42.308 0.00 0.00 0.00 2.23
2963 5923 6.267928 GTCACACCTAACCTGATATCCACTAT 59.732 42.308 0.00 0.00 0.00 2.12
2964 5924 5.597182 GTCACACCTAACCTGATATCCACTA 59.403 44.000 0.00 0.00 0.00 2.74
2965 5925 4.406003 GTCACACCTAACCTGATATCCACT 59.594 45.833 0.00 0.00 0.00 4.00
2966 5926 4.161565 TGTCACACCTAACCTGATATCCAC 59.838 45.833 0.00 0.00 0.00 4.02
2967 5927 4.358214 TGTCACACCTAACCTGATATCCA 58.642 43.478 0.00 0.00 0.00 3.41
2968 5928 5.552870 ATGTCACACCTAACCTGATATCC 57.447 43.478 0.00 0.00 0.00 2.59
2969 5929 7.727181 AGTTATGTCACACCTAACCTGATATC 58.273 38.462 0.00 0.00 32.06 1.63
2970 5930 7.676683 AGTTATGTCACACCTAACCTGATAT 57.323 36.000 0.00 0.00 32.06 1.63
2971 5931 8.638873 CATAGTTATGTCACACCTAACCTGATA 58.361 37.037 0.00 0.00 32.06 2.15
2972 5932 7.125811 ACATAGTTATGTCACACCTAACCTGAT 59.874 37.037 0.00 0.00 42.96 2.90
2973 5933 6.439375 ACATAGTTATGTCACACCTAACCTGA 59.561 38.462 0.00 0.00 42.96 3.86
2974 5934 6.640518 ACATAGTTATGTCACACCTAACCTG 58.359 40.000 0.00 0.72 42.96 4.00
2975 5935 6.869206 ACATAGTTATGTCACACCTAACCT 57.131 37.500 0.00 0.00 42.96 3.50
3001 5961 6.276847 GGTCTGTTTAGGACACATCTAGATG 58.723 44.000 27.63 27.63 44.15 2.90
3002 5962 5.364157 GGGTCTGTTTAGGACACATCTAGAT 59.636 44.000 0.00 0.00 37.11 1.98
3003 5963 4.710375 GGGTCTGTTTAGGACACATCTAGA 59.290 45.833 0.00 0.00 37.11 2.43
3004 5964 4.712337 AGGGTCTGTTTAGGACACATCTAG 59.288 45.833 0.00 0.00 39.36 2.43
3005 5965 4.684724 AGGGTCTGTTTAGGACACATCTA 58.315 43.478 0.00 0.00 39.36 1.98
3006 5966 3.521727 AGGGTCTGTTTAGGACACATCT 58.478 45.455 0.00 0.00 39.36 2.90
3007 5967 3.983044 AGGGTCTGTTTAGGACACATC 57.017 47.619 0.00 0.00 39.36 3.06
3008 5968 4.141251 ACAAAGGGTCTGTTTAGGACACAT 60.141 41.667 0.00 0.00 39.36 3.21
3009 5969 3.201266 ACAAAGGGTCTGTTTAGGACACA 59.799 43.478 0.00 0.00 39.36 3.72
3010 5970 3.816994 ACAAAGGGTCTGTTTAGGACAC 58.183 45.455 0.00 0.00 37.38 3.67
3011 5971 5.367352 TCTTACAAAGGGTCTGTTTAGGACA 59.633 40.000 0.00 0.00 35.61 4.02
3012 5972 5.861727 TCTTACAAAGGGTCTGTTTAGGAC 58.138 41.667 0.00 0.00 0.00 3.85
3013 5973 6.100714 AGTTCTTACAAAGGGTCTGTTTAGGA 59.899 38.462 0.00 0.00 0.00 2.94
3014 5974 6.296803 AGTTCTTACAAAGGGTCTGTTTAGG 58.703 40.000 0.00 0.00 0.00 2.69
3015 5975 7.117956 GCTAGTTCTTACAAAGGGTCTGTTTAG 59.882 40.741 0.00 0.00 0.00 1.85
3016 5976 6.932960 GCTAGTTCTTACAAAGGGTCTGTTTA 59.067 38.462 0.00 0.00 0.00 2.01
3017 5977 5.763698 GCTAGTTCTTACAAAGGGTCTGTTT 59.236 40.000 0.00 0.00 0.00 2.83
3018 5978 5.071923 AGCTAGTTCTTACAAAGGGTCTGTT 59.928 40.000 0.00 0.00 0.00 3.16
3019 5979 4.593634 AGCTAGTTCTTACAAAGGGTCTGT 59.406 41.667 0.00 0.00 0.00 3.41
3020 5980 5.153950 AGCTAGTTCTTACAAAGGGTCTG 57.846 43.478 0.00 0.00 0.00 3.51
3021 5981 6.724905 TCTTAGCTAGTTCTTACAAAGGGTCT 59.275 38.462 0.00 0.00 0.00 3.85
3022 5982 6.932947 TCTTAGCTAGTTCTTACAAAGGGTC 58.067 40.000 0.00 0.00 0.00 4.46
3023 5983 6.574662 GCTCTTAGCTAGTTCTTACAAAGGGT 60.575 42.308 0.00 0.00 38.45 4.34
3024 5984 5.813157 GCTCTTAGCTAGTTCTTACAAAGGG 59.187 44.000 0.00 0.00 38.45 3.95
3025 5985 6.398918 TGCTCTTAGCTAGTTCTTACAAAGG 58.601 40.000 0.03 0.00 42.97 3.11
3026 5986 7.600752 AGTTGCTCTTAGCTAGTTCTTACAAAG 59.399 37.037 0.03 0.00 42.97 2.77
3027 5987 7.442656 AGTTGCTCTTAGCTAGTTCTTACAAA 58.557 34.615 0.03 0.00 42.97 2.83
3028 5988 6.994221 AGTTGCTCTTAGCTAGTTCTTACAA 58.006 36.000 0.03 0.00 42.97 2.41
3029 5989 6.434652 AGAGTTGCTCTTAGCTAGTTCTTACA 59.565 38.462 0.03 0.00 42.97 2.41
3030 5990 6.859017 AGAGTTGCTCTTAGCTAGTTCTTAC 58.141 40.000 0.03 0.00 42.97 2.34
3031 5991 7.201750 GCTAGAGTTGCTCTTAGCTAGTTCTTA 60.202 40.741 3.87 0.00 42.97 2.10
3032 5992 5.993748 AGAGTTGCTCTTAGCTAGTTCTT 57.006 39.130 0.03 0.00 42.97 2.52
3033 5993 5.067283 GCTAGAGTTGCTCTTAGCTAGTTCT 59.933 44.000 3.87 2.45 42.97 3.01
3034 5994 5.163602 TGCTAGAGTTGCTCTTAGCTAGTTC 60.164 44.000 18.66 0.00 42.97 3.01
3035 5995 4.707448 TGCTAGAGTTGCTCTTAGCTAGTT 59.293 41.667 18.66 0.00 42.97 2.24
3036 5996 4.274147 TGCTAGAGTTGCTCTTAGCTAGT 58.726 43.478 18.66 0.00 42.97 2.57
3037 5997 4.578516 TCTGCTAGAGTTGCTCTTAGCTAG 59.421 45.833 18.66 15.59 42.97 3.42
3101 6061 1.605202 GCTCGCAAAGGCATTTTTCCA 60.605 47.619 0.00 0.00 41.24 3.53
3151 6112 4.018233 TCCCTTTTTACGGGTCCATTATGT 60.018 41.667 0.00 0.00 42.56 2.29
3202 6164 2.826777 ATCAGACCCTGCAAAGCCGG 62.827 60.000 0.00 0.00 32.67 6.13
3240 6202 4.523943 GGTGTAAATTTAGGGTTTTCGGGT 59.476 41.667 0.00 0.00 0.00 5.28
3463 6426 7.941431 AGAAAGAAGAATGCAAGATCAAGAT 57.059 32.000 0.00 0.00 0.00 2.40
3471 6434 7.270793 CGAAAGATGAAGAAAGAAGAATGCAAG 59.729 37.037 0.00 0.00 0.00 4.01
3496 6459 1.694639 ACGCCTACTTCTTTCGAACG 58.305 50.000 0.00 0.00 0.00 3.95
3512 6475 0.036294 AACTAGAGGGGAAGCAACGC 60.036 55.000 0.00 0.00 0.00 4.84
3622 6585 7.932491 TGAATGCTCATTTTGATTTTTGGAAGA 59.068 29.630 0.00 0.00 0.00 2.87
3633 6596 6.885918 TGTAGGAAGATGAATGCTCATTTTGA 59.114 34.615 0.00 0.00 42.60 2.69
3646 6609 6.372659 GCTCATTCTTTTGTGTAGGAAGATGA 59.627 38.462 0.00 0.00 30.26 2.92
3678 6641 7.332678 GGTTCAATTGCAATAGCTCATTTCTTT 59.667 33.333 13.39 0.00 42.74 2.52
3693 6656 4.099881 AGCTCTTTCTTTGGTTCAATTGCA 59.900 37.500 0.00 0.00 0.00 4.08
3711 6674 4.626042 CGGTAGCTCATTTTGATAGCTCT 58.374 43.478 0.00 0.00 42.89 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.