Multiple sequence alignment - TraesCS5A01G396100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G396100 chr5A 100.000 7339 0 0 1 7339 591095745 591088407 0.000000e+00 13553.0
1 TraesCS5A01G396100 chr5D 95.701 1977 65 9 667 2636 470390172 470388209 0.000000e+00 3162.0
2 TraesCS5A01G396100 chr5D 94.997 1859 74 12 4085 5939 470386874 470385031 0.000000e+00 2900.0
3 TraesCS5A01G396100 chr5D 95.745 752 30 2 3378 4129 470387623 470386874 0.000000e+00 1210.0
4 TraesCS5A01G396100 chr5D 92.580 593 33 5 83 669 470390681 470390094 0.000000e+00 841.0
5 TraesCS5A01G396100 chr5D 92.644 571 23 8 5977 6547 470385021 470384470 0.000000e+00 804.0
6 TraesCS5A01G396100 chr5D 88.856 341 16 6 2738 3056 470388205 470387865 4.120000e-107 399.0
7 TraesCS5A01G396100 chr5D 83.333 426 22 21 6905 7292 470380143 470379729 1.520000e-91 348.0
8 TraesCS5A01G396100 chr5D 83.805 389 16 25 6544 6903 470384422 470384052 7.100000e-85 326.0
9 TraesCS5A01G396100 chr5D 92.147 191 13 2 3048 3236 470387845 470387655 1.210000e-67 268.0
10 TraesCS5A01G396100 chr5D 87.421 159 14 3 5665 5821 470385379 470385225 2.100000e-40 178.0
11 TraesCS5A01G396100 chr5D 93.651 63 1 1 3 62 470390808 470390746 2.820000e-14 91.6
12 TraesCS5A01G396100 chr5B 95.241 1975 75 9 667 2636 577698440 577696480 0.000000e+00 3109.0
13 TraesCS5A01G396100 chr5B 96.215 1453 49 5 4087 5537 577695277 577693829 0.000000e+00 2374.0
14 TraesCS5A01G396100 chr5B 89.964 1116 74 22 5530 6640 577693775 577692693 0.000000e+00 1406.0
15 TraesCS5A01G396100 chr5B 95.430 744 31 3 3387 4129 577696020 577695279 0.000000e+00 1182.0
16 TraesCS5A01G396100 chr5B 92.206 603 37 3 76 669 577698963 577698362 0.000000e+00 845.0
17 TraesCS5A01G396100 chr5B 94.081 321 17 1 2738 3056 577696476 577696156 3.080000e-133 486.0
18 TraesCS5A01G396100 chr5B 84.548 343 29 12 6901 7228 577663724 577663391 1.190000e-82 318.0
19 TraesCS5A01G396100 chr5B 84.615 286 19 15 6629 6904 577664960 577664690 2.030000e-65 261.0
20 TraesCS5A01G396100 chr5B 93.506 77 3 2 3048 3122 577696136 577696060 6.020000e-21 113.0
21 TraesCS5A01G396100 chr5B 98.333 60 1 0 3 62 577699079 577699020 1.010000e-18 106.0
22 TraesCS5A01G396100 chr5B 91.228 57 3 2 7227 7282 577663374 577663319 7.900000e-10 76.8
23 TraesCS5A01G396100 chr6B 80.302 2051 301 55 3447 5454 129273982 129271992 0.000000e+00 1454.0
24 TraesCS5A01G396100 chr6B 81.117 609 90 15 1019 1609 129276086 129275485 1.440000e-126 464.0
25 TraesCS5A01G396100 chr6D 79.932 2058 311 63 3447 5458 57220669 57218668 0.000000e+00 1419.0
26 TraesCS5A01G396100 chr6D 80.035 571 89 17 1057 1609 57222689 57222126 4.120000e-107 399.0
27 TraesCS5A01G396100 chr6A 79.747 2059 317 61 3438 5453 72434731 72432730 0.000000e+00 1400.0
28 TraesCS5A01G396100 chr6A 79.445 613 97 19 1017 1609 72436813 72436210 2.470000e-109 407.0
29 TraesCS5A01G396100 chr3A 97.674 43 1 0 7297 7339 36140504 36140462 2.840000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G396100 chr5A 591088407 591095745 7338 True 13553.000000 13553 100.000000 1 7339 1 chr5A.!!$R1 7338
1 TraesCS5A01G396100 chr5D 470379729 470390808 11079 True 957.054545 3162 90.989091 3 7292 11 chr5D.!!$R1 7289
2 TraesCS5A01G396100 chr5B 577692693 577699079 6386 True 1202.625000 3109 94.372000 3 6640 8 chr5B.!!$R2 6637
3 TraesCS5A01G396100 chr5B 577663319 577664960 1641 True 218.600000 318 86.797000 6629 7282 3 chr5B.!!$R1 653
4 TraesCS5A01G396100 chr6B 129271992 129276086 4094 True 959.000000 1454 80.709500 1019 5454 2 chr6B.!!$R1 4435
5 TraesCS5A01G396100 chr6D 57218668 57222689 4021 True 909.000000 1419 79.983500 1057 5458 2 chr6D.!!$R1 4401
6 TraesCS5A01G396100 chr6A 72432730 72436813 4083 True 903.500000 1400 79.596000 1017 5453 2 chr6A.!!$R1 4436

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
419 489 0.028505 CGAATGCAGCTACCACATGC 59.971 55.0 0.00 0.00 40.40 4.06 F
665 735 0.036732 CAGCAACCAGAGGCACCTAA 59.963 55.0 0.00 0.00 0.00 2.69 F
666 736 0.036875 AGCAACCAGAGGCACCTAAC 59.963 55.0 0.00 0.00 0.00 2.34 F
2347 2520 0.711670 CGTTGTCCATGGTCGTAACG 59.288 55.0 21.28 21.28 35.62 3.18 F
3156 3481 2.189594 TCAGTTTGCTCCTCCACATG 57.810 50.0 0.00 0.00 0.00 3.21 F
3282 3607 0.550914 TTCAGAAACTGTGCACCCCT 59.449 50.0 15.69 1.06 32.61 4.79 F
3285 3610 0.550914 AGAAACTGTGCACCCCTTCA 59.449 50.0 15.69 0.00 0.00 3.02 F
3290 3615 0.896940 CTGTGCACCCCTTCAGCAAT 60.897 55.0 15.69 0.00 40.35 3.56 F
4434 4825 0.900421 TCAGGGAGATGCAGTCTGTG 59.100 55.0 0.93 0.00 37.29 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1800 1951 0.804989 GCCAACAAACCTCAGGATCG 59.195 55.000 0.00 0.0 0.00 3.69 R
2302 2475 2.486203 TCGTCATACCACATGCCAAAAC 59.514 45.455 0.00 0.0 0.00 2.43 R
2374 2547 2.544486 GCTTCCAGCAAGGTCAACAAAG 60.544 50.000 0.00 0.0 41.89 2.77 R
3263 3588 0.550914 AGGGGTGCACAGTTTCTGAA 59.449 50.000 20.43 0.0 35.18 3.02 R
4962 5353 0.735632 GCTCCTTCAGCTCTGTCACG 60.736 60.000 0.00 0.0 45.83 4.35 R
5229 5639 1.069432 GGATAATGTGCTGCATCTGCG 60.069 52.381 5.27 0.0 45.83 5.18 R
5269 5679 3.366070 GGGTCCTGTGTATGATCGATACG 60.366 52.174 0.00 0.0 40.07 3.06 R
5424 5834 0.610174 TGAGGCTCGAGAAACTGCAT 59.390 50.000 18.75 0.0 0.00 3.96 R
6391 6865 0.101399 GAGCATGGACACGACGAGAT 59.899 55.000 0.00 0.0 0.00 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 66 2.511452 CCTCCGAGATTGGCCCGAT 61.511 63.158 0.00 0.00 0.00 4.18
102 163 1.458445 GTTTCGTTTACGCTGACCCTC 59.542 52.381 0.00 0.00 39.60 4.30
189 250 0.973632 TAGCAGCTTCTGTTTCCGGA 59.026 50.000 0.00 0.00 33.43 5.14
205 266 0.811616 CGGAGGAATTGAGGGCTTCG 60.812 60.000 0.00 0.00 0.00 3.79
217 278 2.029221 GCTTCGGCCGAGTATCCC 59.971 66.667 29.20 10.19 34.32 3.85
218 279 2.735237 CTTCGGCCGAGTATCCCC 59.265 66.667 29.20 0.00 0.00 4.81
236 297 4.770874 GCTCGCCAGCCCGGTTTA 62.771 66.667 0.00 0.00 40.14 2.01
291 352 3.926527 CACTTACTAGCGTTTGAGATGCA 59.073 43.478 0.00 0.00 42.96 3.96
419 489 0.028505 CGAATGCAGCTACCACATGC 59.971 55.000 0.00 0.00 40.40 4.06
473 543 2.094417 GCTCGTATTGTTCAGTGGAAGC 59.906 50.000 0.00 0.00 32.62 3.86
513 583 4.767578 AATCAGCTAGAGGAAATGCAGA 57.232 40.909 0.00 0.00 0.00 4.26
556 626 1.153289 CGTTGCTGGCCTGATAGCT 60.153 57.895 14.77 0.00 40.52 3.32
565 635 4.743651 GCTGGCCTGATAGCTGTGTAATAA 60.744 45.833 14.77 0.00 36.99 1.40
649 719 6.441093 TGACTGTTTATTGGATTGATCAGC 57.559 37.500 0.00 0.00 0.00 4.26
650 720 5.945191 TGACTGTTTATTGGATTGATCAGCA 59.055 36.000 0.00 0.00 0.00 4.41
651 721 6.433716 TGACTGTTTATTGGATTGATCAGCAA 59.566 34.615 0.00 0.00 41.53 3.91
652 722 6.624423 ACTGTTTATTGGATTGATCAGCAAC 58.376 36.000 0.00 0.00 39.78 4.17
653 723 5.964758 TGTTTATTGGATTGATCAGCAACC 58.035 37.500 0.00 0.00 39.78 3.77
654 724 5.479724 TGTTTATTGGATTGATCAGCAACCA 59.520 36.000 0.00 2.04 39.78 3.67
655 725 5.840243 TTATTGGATTGATCAGCAACCAG 57.160 39.130 0.00 0.00 39.78 4.00
656 726 3.438216 TTGGATTGATCAGCAACCAGA 57.562 42.857 0.00 0.00 39.78 3.86
657 727 2.995283 TGGATTGATCAGCAACCAGAG 58.005 47.619 0.00 0.00 39.78 3.35
658 728 2.295885 GGATTGATCAGCAACCAGAGG 58.704 52.381 0.00 0.00 39.78 3.69
659 729 1.674962 GATTGATCAGCAACCAGAGGC 59.325 52.381 0.00 0.00 39.78 4.70
660 730 0.401356 TTGATCAGCAACCAGAGGCA 59.599 50.000 0.00 0.00 0.00 4.75
661 731 0.321919 TGATCAGCAACCAGAGGCAC 60.322 55.000 0.00 0.00 0.00 5.01
662 732 1.001641 ATCAGCAACCAGAGGCACC 60.002 57.895 0.00 0.00 0.00 5.01
663 733 1.495579 ATCAGCAACCAGAGGCACCT 61.496 55.000 0.00 0.00 0.00 4.00
664 734 0.835971 TCAGCAACCAGAGGCACCTA 60.836 55.000 0.00 0.00 0.00 3.08
665 735 0.036732 CAGCAACCAGAGGCACCTAA 59.963 55.000 0.00 0.00 0.00 2.69
666 736 0.036875 AGCAACCAGAGGCACCTAAC 59.963 55.000 0.00 0.00 0.00 2.34
667 737 0.036875 GCAACCAGAGGCACCTAACT 59.963 55.000 0.00 0.00 0.00 2.24
668 738 1.813513 CAACCAGAGGCACCTAACTG 58.186 55.000 0.00 0.00 0.00 3.16
669 739 1.347707 CAACCAGAGGCACCTAACTGA 59.652 52.381 6.91 0.00 32.90 3.41
670 740 1.958288 ACCAGAGGCACCTAACTGAT 58.042 50.000 6.91 0.00 32.90 2.90
671 741 3.116096 ACCAGAGGCACCTAACTGATA 57.884 47.619 6.91 0.00 32.90 2.15
672 742 2.766828 ACCAGAGGCACCTAACTGATAC 59.233 50.000 6.91 0.00 32.90 2.24
673 743 2.223829 CCAGAGGCACCTAACTGATACG 60.224 54.545 6.91 0.00 32.90 3.06
674 744 2.688446 CAGAGGCACCTAACTGATACGA 59.312 50.000 0.12 0.00 32.90 3.43
675 745 2.688958 AGAGGCACCTAACTGATACGAC 59.311 50.000 0.00 0.00 0.00 4.34
676 746 2.688958 GAGGCACCTAACTGATACGACT 59.311 50.000 0.00 0.00 0.00 4.18
677 747 3.097614 AGGCACCTAACTGATACGACTT 58.902 45.455 0.00 0.00 0.00 3.01
678 748 4.275810 AGGCACCTAACTGATACGACTTA 58.724 43.478 0.00 0.00 0.00 2.24
679 749 4.894114 AGGCACCTAACTGATACGACTTAT 59.106 41.667 0.00 0.00 0.00 1.73
680 750 5.363005 AGGCACCTAACTGATACGACTTATT 59.637 40.000 0.00 0.00 0.00 1.40
681 751 6.047231 GGCACCTAACTGATACGACTTATTT 58.953 40.000 0.00 0.00 0.00 1.40
682 752 7.069085 AGGCACCTAACTGATACGACTTATTTA 59.931 37.037 0.00 0.00 0.00 1.40
683 753 7.871463 GGCACCTAACTGATACGACTTATTTAT 59.129 37.037 0.00 0.00 0.00 1.40
684 754 9.257651 GCACCTAACTGATACGACTTATTTATT 57.742 33.333 0.00 0.00 0.00 1.40
709 779 8.958119 TTCTGTTGTTAGAACTTAATGACTGT 57.042 30.769 0.00 0.00 32.02 3.55
710 780 8.958119 TCTGTTGTTAGAACTTAATGACTGTT 57.042 30.769 0.00 0.00 0.00 3.16
711 781 9.391006 TCTGTTGTTAGAACTTAATGACTGTTT 57.609 29.630 0.00 0.00 0.00 2.83
720 790 9.630098 AGAACTTAATGACTGTTTATTGCATTG 57.370 29.630 0.00 0.00 32.13 2.82
721 791 9.624697 GAACTTAATGACTGTTTATTGCATTGA 57.375 29.630 0.00 0.00 32.13 2.57
763 834 4.743057 ACTGTGCAGATCATAGTAGCAA 57.257 40.909 6.17 0.00 43.99 3.91
799 870 7.784633 TTCTTTGAAATTGTTTCCCACATTC 57.215 32.000 0.47 0.00 38.90 2.67
800 871 7.123355 TCTTTGAAATTGTTTCCCACATTCT 57.877 32.000 0.47 0.00 38.90 2.40
801 872 7.209475 TCTTTGAAATTGTTTCCCACATTCTC 58.791 34.615 0.47 0.00 38.90 2.87
802 873 6.477053 TTGAAATTGTTTCCCACATTCTCA 57.523 33.333 0.47 0.00 38.90 3.27
803 874 5.841810 TGAAATTGTTTCCCACATTCTCAC 58.158 37.500 0.47 0.00 38.90 3.51
804 875 5.598005 TGAAATTGTTTCCCACATTCTCACT 59.402 36.000 0.47 0.00 38.90 3.41
805 876 6.098124 TGAAATTGTTTCCCACATTCTCACTT 59.902 34.615 0.47 0.00 38.90 3.16
806 877 6.484364 AATTGTTTCCCACATTCTCACTTT 57.516 33.333 0.00 0.00 34.43 2.66
807 878 5.514274 TTGTTTCCCACATTCTCACTTTC 57.486 39.130 0.00 0.00 34.43 2.62
840 913 5.100259 GTGTTTTTGATGGCTGATGATGAG 58.900 41.667 0.00 0.00 0.00 2.90
904 977 1.609208 ACCTGACAATTGCCACTGTC 58.391 50.000 5.05 0.00 41.93 3.51
913 986 1.990160 TTGCCACTGTCCCTTTCCGT 61.990 55.000 0.00 0.00 0.00 4.69
916 989 1.339727 GCCACTGTCCCTTTCCGTAAT 60.340 52.381 0.00 0.00 0.00 1.89
1199 1275 4.455606 AGCCAGACAATTCTATACAAGGC 58.544 43.478 0.00 0.00 34.88 4.35
1245 1321 4.202430 CCCACCTCTTACACTTTTGGTACT 60.202 45.833 0.00 0.00 0.00 2.73
1322 1411 9.555727 TCTTTGACTAATTAATGCCTATGTACC 57.444 33.333 0.00 0.00 0.00 3.34
1361 1450 1.374758 GGCAGAGTTGTCAGACGGG 60.375 63.158 0.00 0.00 0.00 5.28
1456 1545 6.659745 TTACTTTCAAGACTGGTGCTAGTA 57.340 37.500 0.00 0.00 0.00 1.82
1462 1551 3.810310 AGACTGGTGCTAGTAGAATGC 57.190 47.619 0.00 0.00 0.00 3.56
1467 1556 4.163078 ACTGGTGCTAGTAGAATGCTCATT 59.837 41.667 0.00 0.00 29.76 2.57
1470 1559 4.260948 GGTGCTAGTAGAATGCTCATTTGC 60.261 45.833 0.00 0.00 29.76 3.68
1471 1560 3.879295 TGCTAGTAGAATGCTCATTTGCC 59.121 43.478 0.00 0.00 29.76 4.52
1557 1646 3.065925 GCAAGACATTTACCATGAGAGGC 59.934 47.826 0.00 0.00 0.00 4.70
1589 1678 8.194104 AGAGAGTGCTGTTAGTGATTTATACAG 58.806 37.037 0.00 0.00 39.29 2.74
1643 1732 7.606456 TCTTCTGAAACAACAAGTCTGTAAAGT 59.394 33.333 0.00 0.00 33.45 2.66
1800 1951 1.675116 GGTTCCCTTCGGCTGTTAGAC 60.675 57.143 0.00 0.00 0.00 2.59
1822 1973 0.843309 TCCTGAGGTTTGTTGGCTCA 59.157 50.000 0.00 0.00 0.00 4.26
1823 1974 1.214175 TCCTGAGGTTTGTTGGCTCAA 59.786 47.619 0.00 0.00 0.00 3.02
2302 2475 9.953697 CTAGTAAGCATACTGTCCTACTTTTAG 57.046 37.037 11.79 0.00 42.37 1.85
2312 2485 6.016276 ACTGTCCTACTTTTAGTTTTGGCATG 60.016 38.462 0.00 0.00 0.00 4.06
2347 2520 0.711670 CGTTGTCCATGGTCGTAACG 59.288 55.000 21.28 21.28 35.62 3.18
2349 2522 2.613691 GTTGTCCATGGTCGTAACGAT 58.386 47.619 12.58 0.00 38.42 3.73
2374 2547 6.713792 TGGTTTTTGCTTTGTTTGTAGAAC 57.286 33.333 0.00 0.00 0.00 3.01
2507 2680 4.010349 CCGGAAGCTAAGGTCTGATTTTT 58.990 43.478 0.00 0.00 0.00 1.94
2545 2723 6.884836 ACTTCTACATAGGAAATTTGGTCCAC 59.115 38.462 0.00 0.00 37.65 4.02
2580 2764 4.040706 AGCTTTTTCCCTGCATTCATTTGA 59.959 37.500 0.00 0.00 0.00 2.69
2617 2801 8.299570 CCAAATTACTTAGATGCACTGTTTCTT 58.700 33.333 0.00 0.00 0.00 2.52
2653 2837 9.764363 CTCTAGCTATTTGTTGGATATGTAACA 57.236 33.333 0.00 0.00 35.20 2.41
2657 2841 9.632638 AGCTATTTGTTGGATATGTAACAATCT 57.367 29.630 12.38 7.84 43.76 2.40
2658 2842 9.884465 GCTATTTGTTGGATATGTAACAATCTC 57.116 33.333 12.38 3.30 43.76 2.75
2661 2845 9.685276 ATTTGTTGGATATGTAACAATCTCTCA 57.315 29.630 12.38 1.54 43.76 3.27
2662 2846 9.513906 TTTGTTGGATATGTAACAATCTCTCAA 57.486 29.630 12.38 0.00 43.76 3.02
2663 2847 8.722480 TGTTGGATATGTAACAATCTCTCAAG 57.278 34.615 0.00 0.00 34.17 3.02
2664 2848 8.321353 TGTTGGATATGTAACAATCTCTCAAGT 58.679 33.333 0.00 0.00 34.17 3.16
2665 2849 9.167311 GTTGGATATGTAACAATCTCTCAAGTT 57.833 33.333 0.00 0.00 0.00 2.66
2673 2857 4.319177 ACAATCTCTCAAGTTAGTGTGGC 58.681 43.478 0.00 0.00 0.00 5.01
2674 2858 4.202357 ACAATCTCTCAAGTTAGTGTGGCA 60.202 41.667 0.00 0.00 0.00 4.92
2679 2863 5.069914 TCTCTCAAGTTAGTGTGGCAACTTA 59.930 40.000 1.48 0.00 41.78 2.24
2680 2864 5.297547 TCTCAAGTTAGTGTGGCAACTTAG 58.702 41.667 1.48 1.82 41.78 2.18
2683 2867 4.884668 AGTTAGTGTGGCAACTTAGCTA 57.115 40.909 7.46 0.00 30.89 3.32
2697 2881 8.624776 GGCAACTTAGCTACTAATGAATTTCAT 58.375 33.333 6.06 6.06 34.94 2.57
2708 2893 8.798859 ACTAATGAATTTCATACAGAAGTGCT 57.201 30.769 19.92 4.01 35.76 4.40
2711 2896 7.692460 ATGAATTTCATACAGAAGTGCTCAA 57.308 32.000 10.16 0.00 34.88 3.02
2713 2898 6.712095 TGAATTTCATACAGAAGTGCTCAACT 59.288 34.615 0.00 0.00 42.60 3.16
2720 2905 3.201290 CAGAAGTGCTCAACTGAAGTGT 58.799 45.455 6.43 0.00 39.81 3.55
2721 2906 4.141937 ACAGAAGTGCTCAACTGAAGTGTA 60.142 41.667 15.38 0.00 39.81 2.90
2722 2907 4.811024 CAGAAGTGCTCAACTGAAGTGTAA 59.189 41.667 6.43 0.00 39.81 2.41
2728 2913 6.318648 AGTGCTCAACTGAAGTGTAAATGAAA 59.681 34.615 0.00 0.00 37.88 2.69
2804 2993 9.338622 GTTATTATGCACCTAGTTAGTCCAATT 57.661 33.333 0.00 0.00 0.00 2.32
2824 3013 4.647424 TTCCAACAATTTTGAGCGAGTT 57.353 36.364 0.00 0.00 0.00 3.01
2958 3233 7.498900 CAGTAGTTTTATCATATTGCAGGGTGA 59.501 37.037 0.00 0.00 0.00 4.02
3109 3434 9.623000 AACCATGGTAAATACTTAGATAACCAC 57.377 33.333 20.12 0.00 38.28 4.16
3110 3435 8.999895 ACCATGGTAAATACTTAGATAACCACT 58.000 33.333 18.10 0.00 38.28 4.00
3146 3471 6.438763 GTTACTGCATTAAGTTCAGTTTGCT 58.561 36.000 10.86 0.00 40.96 3.91
3153 3478 2.262423 AGTTCAGTTTGCTCCTCCAC 57.738 50.000 0.00 0.00 0.00 4.02
3156 3481 2.189594 TCAGTTTGCTCCTCCACATG 57.810 50.000 0.00 0.00 0.00 3.21
3165 3490 4.724399 TGCTCCTCCACATGTTTTTCTAA 58.276 39.130 0.00 0.00 0.00 2.10
3174 3499 6.775142 TCCACATGTTTTTCTAATGAACCTGA 59.225 34.615 0.00 0.00 31.02 3.86
3194 3519 9.905713 AACCTGACAAATATCTAAAAGATGCTA 57.094 29.630 0.00 0.00 35.37 3.49
3263 3588 9.686683 AAAGATGCTACAAATTATACCTGAGTT 57.313 29.630 0.00 0.00 0.00 3.01
3264 3589 9.686683 AAGATGCTACAAATTATACCTGAGTTT 57.313 29.630 0.00 0.00 0.00 2.66
3265 3590 9.331282 AGATGCTACAAATTATACCTGAGTTTC 57.669 33.333 0.00 0.00 0.00 2.78
3267 3592 8.492673 TGCTACAAATTATACCTGAGTTTCAG 57.507 34.615 0.00 0.00 43.91 3.02
3280 3605 2.492019 GTTTCAGAAACTGTGCACCC 57.508 50.000 15.69 0.00 38.35 4.61
3281 3606 1.067060 GTTTCAGAAACTGTGCACCCC 59.933 52.381 15.69 0.00 38.35 4.95
3282 3607 0.550914 TTCAGAAACTGTGCACCCCT 59.449 50.000 15.69 1.06 32.61 4.79
3283 3608 0.550914 TCAGAAACTGTGCACCCCTT 59.449 50.000 15.69 4.13 32.61 3.95
3284 3609 0.954452 CAGAAACTGTGCACCCCTTC 59.046 55.000 15.69 13.30 0.00 3.46
3285 3610 0.550914 AGAAACTGTGCACCCCTTCA 59.449 50.000 15.69 0.00 0.00 3.02
3286 3611 0.954452 GAAACTGTGCACCCCTTCAG 59.046 55.000 15.69 6.28 0.00 3.02
3287 3612 1.109323 AAACTGTGCACCCCTTCAGC 61.109 55.000 15.69 0.00 0.00 4.26
3288 3613 2.113774 CTGTGCACCCCTTCAGCA 59.886 61.111 15.69 0.00 35.63 4.41
3289 3614 1.529010 CTGTGCACCCCTTCAGCAA 60.529 57.895 15.69 0.00 40.35 3.91
3290 3615 0.896940 CTGTGCACCCCTTCAGCAAT 60.897 55.000 15.69 0.00 40.35 3.56
3291 3616 1.180456 TGTGCACCCCTTCAGCAATG 61.180 55.000 15.69 0.00 40.35 2.82
3292 3617 2.277591 TGCACCCCTTCAGCAATGC 61.278 57.895 0.00 0.00 34.97 3.56
3293 3618 1.980772 GCACCCCTTCAGCAATGCT 60.981 57.895 0.00 0.00 40.77 3.79
3294 3619 1.538687 GCACCCCTTCAGCAATGCTT 61.539 55.000 4.36 0.00 36.40 3.91
3295 3620 1.838112 CACCCCTTCAGCAATGCTTA 58.162 50.000 4.36 0.00 36.40 3.09
3296 3621 2.381911 CACCCCTTCAGCAATGCTTAT 58.618 47.619 4.36 0.00 36.40 1.73
3297 3622 3.554934 CACCCCTTCAGCAATGCTTATA 58.445 45.455 4.36 0.00 36.40 0.98
3298 3623 3.953612 CACCCCTTCAGCAATGCTTATAA 59.046 43.478 4.36 0.00 36.40 0.98
3299 3624 4.586001 CACCCCTTCAGCAATGCTTATAAT 59.414 41.667 4.36 0.00 36.40 1.28
3300 3625 5.069516 CACCCCTTCAGCAATGCTTATAATT 59.930 40.000 4.36 0.00 36.40 1.40
3301 3626 6.265196 CACCCCTTCAGCAATGCTTATAATTA 59.735 38.462 4.36 0.00 36.40 1.40
3302 3627 6.491403 ACCCCTTCAGCAATGCTTATAATTAG 59.509 38.462 4.36 0.00 36.40 1.73
3303 3628 6.716628 CCCCTTCAGCAATGCTTATAATTAGA 59.283 38.462 4.36 0.00 36.40 2.10
3304 3629 7.231317 CCCCTTCAGCAATGCTTATAATTAGAA 59.769 37.037 4.36 2.53 36.40 2.10
3305 3630 8.632679 CCCTTCAGCAATGCTTATAATTAGAAA 58.367 33.333 4.36 0.00 36.40 2.52
3306 3631 9.674824 CCTTCAGCAATGCTTATAATTAGAAAG 57.325 33.333 4.36 6.15 36.40 2.62
3307 3632 9.674824 CTTCAGCAATGCTTATAATTAGAAAGG 57.325 33.333 4.36 0.00 36.40 3.11
3308 3633 8.752005 TCAGCAATGCTTATAATTAGAAAGGT 57.248 30.769 4.36 0.00 36.40 3.50
3309 3634 9.189156 TCAGCAATGCTTATAATTAGAAAGGTT 57.811 29.630 4.36 0.00 36.40 3.50
3321 3646 9.780186 ATAATTAGAAAGGTTATGTGGACTAGC 57.220 33.333 0.00 0.00 0.00 3.42
3322 3647 6.614694 TTAGAAAGGTTATGTGGACTAGCA 57.385 37.500 0.00 0.00 0.00 3.49
3323 3648 5.091261 AGAAAGGTTATGTGGACTAGCAG 57.909 43.478 0.00 0.00 0.00 4.24
3324 3649 4.532521 AGAAAGGTTATGTGGACTAGCAGT 59.467 41.667 0.00 0.00 0.00 4.40
3325 3650 4.910458 AAGGTTATGTGGACTAGCAGTT 57.090 40.909 0.00 0.00 0.00 3.16
3326 3651 6.212791 AGAAAGGTTATGTGGACTAGCAGTTA 59.787 38.462 0.00 0.00 0.00 2.24
3327 3652 5.599999 AGGTTATGTGGACTAGCAGTTAG 57.400 43.478 0.00 0.00 35.39 2.34
3328 3653 4.120589 GGTTATGTGGACTAGCAGTTAGC 58.879 47.826 0.00 0.00 46.19 3.09
3343 3668 5.415415 CAGTTAGCATCTGCATAGGTTTC 57.585 43.478 4.79 0.00 45.16 2.78
3344 3669 5.121811 CAGTTAGCATCTGCATAGGTTTCT 58.878 41.667 4.79 0.00 45.16 2.52
3345 3670 5.587844 CAGTTAGCATCTGCATAGGTTTCTT 59.412 40.000 4.79 0.00 45.16 2.52
3346 3671 6.763135 CAGTTAGCATCTGCATAGGTTTCTTA 59.237 38.462 4.79 0.00 45.16 2.10
3347 3672 7.280876 CAGTTAGCATCTGCATAGGTTTCTTAA 59.719 37.037 4.79 0.00 45.16 1.85
3348 3673 7.995488 AGTTAGCATCTGCATAGGTTTCTTAAT 59.005 33.333 4.79 0.00 45.16 1.40
3349 3674 8.624776 GTTAGCATCTGCATAGGTTTCTTAATT 58.375 33.333 4.79 0.00 45.16 1.40
3350 3675 7.651027 AGCATCTGCATAGGTTTCTTAATTT 57.349 32.000 4.79 0.00 45.16 1.82
3351 3676 8.071177 AGCATCTGCATAGGTTTCTTAATTTT 57.929 30.769 4.79 0.00 45.16 1.82
3352 3677 9.189156 AGCATCTGCATAGGTTTCTTAATTTTA 57.811 29.630 4.79 0.00 45.16 1.52
3353 3678 9.801873 GCATCTGCATAGGTTTCTTAATTTTAA 57.198 29.630 0.00 0.00 41.59 1.52
3357 3682 8.980143 TGCATAGGTTTCTTAATTTTAACAGC 57.020 30.769 0.00 0.00 0.00 4.40
3358 3683 8.802267 TGCATAGGTTTCTTAATTTTAACAGCT 58.198 29.630 0.00 0.00 0.00 4.24
3368 3693 9.383519 TCTTAATTTTAACAGCTATGTCTGAGG 57.616 33.333 3.46 0.00 39.29 3.86
3369 3694 9.383519 CTTAATTTTAACAGCTATGTCTGAGGA 57.616 33.333 3.46 0.00 39.29 3.71
3370 3695 9.733556 TTAATTTTAACAGCTATGTCTGAGGAA 57.266 29.630 3.46 0.00 39.29 3.36
3371 3696 8.635765 AATTTTAACAGCTATGTCTGAGGAAA 57.364 30.769 3.46 2.36 39.29 3.13
3372 3697 8.635765 ATTTTAACAGCTATGTCTGAGGAAAA 57.364 30.769 3.46 6.54 39.29 2.29
3373 3698 7.672983 TTTAACAGCTATGTCTGAGGAAAAG 57.327 36.000 3.46 0.00 39.29 2.27
3374 3699 5.489792 AACAGCTATGTCTGAGGAAAAGA 57.510 39.130 3.46 0.00 39.29 2.52
3375 3700 5.083533 ACAGCTATGTCTGAGGAAAAGAG 57.916 43.478 3.46 0.00 32.99 2.85
3376 3701 4.530161 ACAGCTATGTCTGAGGAAAAGAGT 59.470 41.667 3.46 0.00 32.99 3.24
3456 3781 7.935338 AAATATAAATTTGGATTGCAGCTCG 57.065 32.000 0.00 0.00 33.97 5.03
3546 3871 1.551883 GGGAATGCAAGAACAGCCATT 59.448 47.619 0.00 0.00 0.00 3.16
3649 3974 7.867403 AGGTCACAAATACTGCAAAAGTTAATG 59.133 33.333 0.00 0.00 40.56 1.90
3675 4003 4.464069 AAGAGCTGTGACTATGAGGTTC 57.536 45.455 0.00 0.00 0.00 3.62
3679 4007 4.573900 AGCTGTGACTATGAGGTTCTTTG 58.426 43.478 0.00 0.00 0.00 2.77
3680 4008 4.040952 AGCTGTGACTATGAGGTTCTTTGT 59.959 41.667 0.00 0.00 0.00 2.83
3681 4009 4.390297 GCTGTGACTATGAGGTTCTTTGTC 59.610 45.833 0.00 0.00 30.93 3.18
3682 4010 5.541845 CTGTGACTATGAGGTTCTTTGTCA 58.458 41.667 5.58 5.58 35.33 3.58
3683 4011 5.297547 TGTGACTATGAGGTTCTTTGTCAC 58.702 41.667 21.20 21.20 46.56 3.67
3684 4012 5.297547 GTGACTATGAGGTTCTTTGTCACA 58.702 41.667 22.16 0.00 46.14 3.58
3685 4013 5.177696 GTGACTATGAGGTTCTTTGTCACAC 59.822 44.000 22.16 7.88 46.14 3.82
3687 4015 3.864789 ATGAGGTTCTTTGTCACACCT 57.135 42.857 0.00 0.00 42.66 4.00
3878 4209 2.530701 ACAGGTAAGGTGGTCTCTGAG 58.469 52.381 0.00 0.00 0.00 3.35
4029 4374 2.596807 GCACGTTCACAACTCGAAGAAC 60.597 50.000 0.00 0.00 37.57 3.01
4248 4639 4.277672 AGGAATTCAATCAGGCAATCATCG 59.722 41.667 7.93 0.00 0.00 3.84
4434 4825 0.900421 TCAGGGAGATGCAGTCTGTG 59.100 55.000 0.93 0.00 37.29 3.66
5040 5448 2.743718 CAGGTCCTGGTCTTGCGT 59.256 61.111 11.46 0.00 0.00 5.24
5041 5449 1.071471 CAGGTCCTGGTCTTGCGTT 59.929 57.895 11.46 0.00 0.00 4.84
5066 5475 5.458041 AATTCACTTGTTGGTCATTCTGG 57.542 39.130 0.00 0.00 0.00 3.86
5068 5477 3.743521 TCACTTGTTGGTCATTCTGGAG 58.256 45.455 0.00 0.00 0.00 3.86
5084 5493 8.700051 TCATTCTGGAGTTATTTTGTTTTTCCA 58.300 29.630 0.00 0.00 0.00 3.53
5229 5639 6.538263 AGTCATGGGAGAGATTATTTAAGGC 58.462 40.000 0.00 0.00 0.00 4.35
5269 5679 5.036117 TCCAGCTTTGGGATATCTGTTAC 57.964 43.478 2.05 0.00 0.00 2.50
5299 5709 4.620723 TCATACACAGGACCCAGTTCTAT 58.379 43.478 0.00 0.00 0.00 1.98
5344 5754 5.157781 GCAGACCAGATATACATCGAAGTC 58.842 45.833 0.00 0.00 36.20 3.01
5424 5834 3.519973 CTGCACCTGGTGACGAGCA 62.520 63.158 30.23 18.52 35.23 4.26
5455 5865 4.649674 TCTCGAGCCTCAAGGTAAATATGT 59.350 41.667 7.81 0.00 37.57 2.29
5469 5879 6.891908 AGGTAAATATGTTGCCTGTCATCTTT 59.108 34.615 6.51 0.00 0.00 2.52
5523 5933 8.305317 GGTTAACTCTAGAAGCAAGAAAGTAGA 58.695 37.037 5.42 0.00 0.00 2.59
5526 5936 6.919721 ACTCTAGAAGCAAGAAAGTAGAGTG 58.080 40.000 8.64 0.00 43.14 3.51
5548 6019 9.398538 GAGTGGAATAGTACTAGAAAAGAGAGA 57.601 37.037 8.85 0.00 0.00 3.10
5551 6022 9.702253 TGGAATAGTACTAGAAAAGAGAGATGT 57.298 33.333 8.85 0.00 0.00 3.06
5606 6077 8.668353 GTCATTTCAGTTAGCTATCATTCAACA 58.332 33.333 4.67 0.00 0.00 3.33
5611 6082 7.112122 TCAGTTAGCTATCATTCAACAACCAT 58.888 34.615 4.67 0.00 0.00 3.55
5626 6097 7.402054 TCAACAACCATAACCTTGTCTATGAT 58.598 34.615 0.00 0.00 30.11 2.45
5730 6201 5.484085 CACAGATTTCGTCATGTTCATACG 58.516 41.667 0.00 0.00 37.96 3.06
5767 6239 3.321682 CCATCATTCAACAACCACAACCT 59.678 43.478 0.00 0.00 0.00 3.50
5780 6252 6.777580 ACAACCACAACCTTTTCTCTGATTAT 59.222 34.615 0.00 0.00 0.00 1.28
5782 6254 6.542821 ACCACAACCTTTTCTCTGATTATGA 58.457 36.000 0.00 0.00 0.00 2.15
5808 6280 4.755191 ATTTCGTCGTCATGTTCATACG 57.245 40.909 0.00 0.00 37.96 3.06
5812 6284 2.776765 CGTCGTCATGTTCATACGTCTC 59.223 50.000 0.00 0.00 37.83 3.36
5814 6286 3.786576 GTCGTCATGTTCATACGTCTCTG 59.213 47.826 0.00 0.00 37.83 3.35
5823 6295 5.066117 TGTTCATACGTCTCTGCTAGTTAGG 59.934 44.000 0.00 0.00 0.00 2.69
5861 6335 8.685838 TTTTAAGTTGTAGTTAGCCATGAGTT 57.314 30.769 0.00 0.00 0.00 3.01
5871 6345 5.466728 AGTTAGCCATGAGTTAATATGCACG 59.533 40.000 0.00 0.00 0.00 5.34
5881 6355 4.870426 AGTTAATATGCACGTCCTTGTCTG 59.130 41.667 0.00 0.00 0.00 3.51
5891 6365 4.056050 ACGTCCTTGTCTGTGATGTAAAC 58.944 43.478 0.00 0.00 0.00 2.01
5892 6366 4.055360 CGTCCTTGTCTGTGATGTAAACA 58.945 43.478 0.00 0.00 0.00 2.83
5894 6368 4.055360 TCCTTGTCTGTGATGTAAACACG 58.945 43.478 0.00 0.00 43.28 4.49
5896 6370 4.690748 CCTTGTCTGTGATGTAAACACGAT 59.309 41.667 0.00 0.00 43.28 3.73
5897 6371 5.163953 CCTTGTCTGTGATGTAAACACGATC 60.164 44.000 0.00 0.00 43.28 3.69
5900 6374 4.923871 GTCTGTGATGTAAACACGATCAGT 59.076 41.667 0.00 0.00 43.28 3.41
5918 6392 6.513230 CGATCAGTCCAAGTCAAAATGTTTCA 60.513 38.462 0.00 0.00 0.00 2.69
5927 6401 5.990408 AGTCAAAATGTTTCATCAGTCGTC 58.010 37.500 0.00 0.00 0.00 4.20
5941 6415 3.452755 AGTCGTCACTGAATGTCACAA 57.547 42.857 0.00 0.00 0.00 3.33
5942 6416 3.792401 AGTCGTCACTGAATGTCACAAA 58.208 40.909 0.00 0.00 0.00 2.83
5943 6417 3.555956 AGTCGTCACTGAATGTCACAAAC 59.444 43.478 0.00 0.00 0.00 2.93
5944 6418 2.869801 TCGTCACTGAATGTCACAAACC 59.130 45.455 0.00 0.00 0.00 3.27
5945 6419 2.611751 CGTCACTGAATGTCACAAACCA 59.388 45.455 0.00 0.00 0.00 3.67
5946 6420 3.250762 CGTCACTGAATGTCACAAACCAT 59.749 43.478 0.00 0.00 0.00 3.55
5948 6422 5.591099 GTCACTGAATGTCACAAACCATTT 58.409 37.500 0.00 0.00 31.67 2.32
5950 6424 6.857964 GTCACTGAATGTCACAAACCATTTAG 59.142 38.462 0.00 0.00 39.34 1.85
5951 6425 5.630680 CACTGAATGTCACAAACCATTTAGC 59.369 40.000 0.00 0.00 37.88 3.09
5952 6426 5.536161 ACTGAATGTCACAAACCATTTAGCT 59.464 36.000 0.00 0.00 37.88 3.32
5953 6427 6.012658 TGAATGTCACAAACCATTTAGCTC 57.987 37.500 0.00 0.00 31.67 4.09
5954 6428 5.048083 TGAATGTCACAAACCATTTAGCTCC 60.048 40.000 0.00 0.00 31.67 4.70
5955 6429 3.826524 TGTCACAAACCATTTAGCTCCA 58.173 40.909 0.00 0.00 0.00 3.86
5956 6430 4.211125 TGTCACAAACCATTTAGCTCCAA 58.789 39.130 0.00 0.00 0.00 3.53
5957 6431 4.646945 TGTCACAAACCATTTAGCTCCAAA 59.353 37.500 0.00 0.00 0.00 3.28
5958 6432 5.304101 TGTCACAAACCATTTAGCTCCAAAT 59.696 36.000 0.00 0.00 0.00 2.32
5959 6433 5.634859 GTCACAAACCATTTAGCTCCAAATG 59.365 40.000 13.01 13.01 42.85 2.32
5965 6439 4.303086 CATTTAGCTCCAAATGGCTCAG 57.697 45.455 12.36 0.00 40.62 3.35
5966 6440 1.755179 TTAGCTCCAAATGGCTCAGC 58.245 50.000 0.00 3.99 39.65 4.26
5967 6441 0.914644 TAGCTCCAAATGGCTCAGCT 59.085 50.000 15.79 15.79 43.00 4.24
5968 6442 0.039326 AGCTCCAAATGGCTCAGCTT 59.961 50.000 8.01 0.00 39.11 3.74
5969 6443 0.893447 GCTCCAAATGGCTCAGCTTT 59.107 50.000 0.00 0.00 31.88 3.51
5970 6444 1.135170 GCTCCAAATGGCTCAGCTTTC 60.135 52.381 0.00 0.00 31.88 2.62
5971 6445 1.131883 CTCCAAATGGCTCAGCTTTCG 59.868 52.381 0.00 0.00 34.44 3.46
5972 6446 0.883833 CCAAATGGCTCAGCTTTCGT 59.116 50.000 0.00 0.00 0.00 3.85
5973 6447 1.270550 CCAAATGGCTCAGCTTTCGTT 59.729 47.619 0.00 0.00 0.00 3.85
5974 6448 2.589014 CAAATGGCTCAGCTTTCGTTC 58.411 47.619 0.00 0.00 0.00 3.95
5975 6449 1.896220 AATGGCTCAGCTTTCGTTCA 58.104 45.000 0.00 0.00 0.00 3.18
6316 6790 3.099141 ACCCCATTTCCAACATGATCAC 58.901 45.455 0.00 0.00 0.00 3.06
6340 6814 2.125753 GGCTCAGCTCTGGTGACG 60.126 66.667 0.00 0.00 35.04 4.35
6341 6815 2.640302 GGCTCAGCTCTGGTGACGA 61.640 63.158 0.00 0.00 35.04 4.20
6391 6865 2.284112 AGGGGAAACGGGCGTAGA 60.284 61.111 0.00 0.00 0.00 2.59
6393 6867 1.227468 GGGGAAACGGGCGTAGATC 60.227 63.158 0.00 0.00 0.00 2.75
6424 6900 2.592861 GCTCCGGACATGATGGCC 60.593 66.667 7.42 7.42 44.03 5.36
6471 6948 6.157645 GGATGGAGGATGGTGTAGATATTGAT 59.842 42.308 0.00 0.00 0.00 2.57
6472 6949 6.364568 TGGAGGATGGTGTAGATATTGATG 57.635 41.667 0.00 0.00 0.00 3.07
6473 6950 6.084060 TGGAGGATGGTGTAGATATTGATGA 58.916 40.000 0.00 0.00 0.00 2.92
6524 7002 4.163552 GCAAAAGTATTCGTTTGGCTACC 58.836 43.478 11.45 0.00 41.10 3.18
6528 7006 5.927281 AAGTATTCGTTTGGCTACCTCTA 57.073 39.130 0.00 0.00 0.00 2.43
6626 7157 9.198837 GACCTTTTGCCTCGAAAATAAATAAAA 57.801 29.630 0.00 0.00 0.00 1.52
6631 7162 7.532682 TGCCTCGAAAATAAATAAAATTGGC 57.467 32.000 0.00 0.00 35.22 4.52
6632 7163 7.099764 TGCCTCGAAAATAAATAAAATTGGCA 58.900 30.769 0.00 0.00 41.23 4.92
6633 7164 7.768120 TGCCTCGAAAATAAATAAAATTGGCAT 59.232 29.630 0.00 0.00 39.07 4.40
6635 7166 8.550376 CCTCGAAAATAAATAAAATTGGCATGG 58.450 33.333 0.00 0.00 0.00 3.66
6636 7167 9.311916 CTCGAAAATAAATAAAATTGGCATGGA 57.688 29.630 0.00 0.00 0.00 3.41
6638 7169 8.334632 CGAAAATAAATAAAATTGGCATGGACC 58.665 33.333 0.00 0.00 0.00 4.46
6640 7171 8.962884 AAATAAATAAAATTGGCATGGACCTC 57.037 30.769 0.00 0.00 0.00 3.85
6641 7172 5.357742 AAATAAAATTGGCATGGACCTCC 57.642 39.130 0.00 0.00 0.00 4.30
6677 7234 2.809601 GCTGTGCGACCGGTACTG 60.810 66.667 7.34 7.87 34.18 2.74
6678 7235 2.809601 CTGTGCGACCGGTACTGC 60.810 66.667 7.34 13.46 31.78 4.40
6679 7236 4.367023 TGTGCGACCGGTACTGCC 62.367 66.667 19.66 12.93 31.78 4.85
6680 7237 4.065281 GTGCGACCGGTACTGCCT 62.065 66.667 19.66 0.00 34.25 4.75
6703 7260 1.388065 CCTGCCCGTCTCTTCTCGAT 61.388 60.000 0.00 0.00 0.00 3.59
6705 7262 1.066587 GCCCGTCTCTTCTCGATGG 59.933 63.158 0.00 0.00 37.32 3.51
6706 7263 1.384989 GCCCGTCTCTTCTCGATGGA 61.385 60.000 0.00 0.00 39.43 3.41
6758 7315 5.278169 CCTGTAATTAGCAGTGATCATTGCC 60.278 44.000 32.27 19.60 43.95 4.52
6808 7365 2.983592 CTTTGTGGCACCGGACCC 60.984 66.667 16.26 8.53 0.00 4.46
6809 7366 4.589675 TTTGTGGCACCGGACCCC 62.590 66.667 16.26 5.55 0.00 4.95
6849 7410 3.772572 TCCACTTCTTCCCAATACATCGA 59.227 43.478 0.00 0.00 0.00 3.59
6852 7413 3.517901 ACTTCTTCCCAATACATCGACCA 59.482 43.478 0.00 0.00 0.00 4.02
6862 7423 1.160137 ACATCGACCAGCAAAGCTTC 58.840 50.000 0.00 0.00 36.40 3.86
6869 7430 3.715854 CAGCAAAGCTTCTGGATGC 57.284 52.632 11.32 11.32 36.40 3.91
6910 8525 1.546029 CGTCTGATTGAGAGGGTGACA 59.454 52.381 0.00 0.00 33.61 3.58
6916 11465 0.106708 TTGAGAGGGTGACACTGTGC 59.893 55.000 7.90 1.49 0.00 4.57
6922 11472 3.009473 AGAGGGTGACACTGTGCATATTT 59.991 43.478 7.90 0.00 0.00 1.40
6925 11475 3.758554 GGGTGACACTGTGCATATTTCTT 59.241 43.478 7.90 0.00 0.00 2.52
6937 11487 7.366513 TGTGCATATTTCTTCGATGAACAAAA 58.633 30.769 12.85 0.00 36.41 2.44
6948 11498 6.287107 TCGATGAACAAAAGAAAGAGACAC 57.713 37.500 0.00 0.00 0.00 3.67
6974 11525 5.836821 TGACTAAGCTCGTCATCAGTTAT 57.163 39.130 13.11 0.00 36.54 1.89
6975 11526 6.208988 TGACTAAGCTCGTCATCAGTTATT 57.791 37.500 13.11 0.00 36.54 1.40
6978 11529 7.915923 TGACTAAGCTCGTCATCAGTTATTAAG 59.084 37.037 13.11 0.00 36.54 1.85
6980 11531 8.467598 ACTAAGCTCGTCATCAGTTATTAAGAA 58.532 33.333 0.00 0.00 0.00 2.52
6983 11534 8.190888 AGCTCGTCATCAGTTATTAAGAAAAG 57.809 34.615 0.00 0.00 0.00 2.27
6985 11536 8.324567 GCTCGTCATCAGTTATTAAGAAAAGAG 58.675 37.037 0.00 0.00 0.00 2.85
6987 11538 9.923143 TCGTCATCAGTTATTAAGAAAAGAGAA 57.077 29.630 0.00 0.00 0.00 2.87
7008 11559 6.721318 AGAAATACAGCCAACCAAGATAAGA 58.279 36.000 0.00 0.00 0.00 2.10
7026 11584 8.304202 AGATAAGACAGCAGCTTAAAATATCG 57.696 34.615 0.00 0.00 32.16 2.92
7062 11620 3.555547 GCACCATTTTGCGGATATTTTCC 59.444 43.478 0.00 0.00 41.59 3.13
7063 11621 4.680440 GCACCATTTTGCGGATATTTTCCT 60.680 41.667 0.00 0.00 42.99 3.36
7066 11624 4.370917 CATTTTGCGGATATTTTCCTGGG 58.629 43.478 0.00 0.00 42.99 4.45
7067 11625 3.374042 TTTGCGGATATTTTCCTGGGA 57.626 42.857 0.00 0.00 42.99 4.37
7068 11626 3.593442 TTGCGGATATTTTCCTGGGAT 57.407 42.857 0.00 0.00 42.99 3.85
7069 11627 2.862541 TGCGGATATTTTCCTGGGATG 58.137 47.619 0.00 0.00 42.99 3.51
7070 11628 2.441375 TGCGGATATTTTCCTGGGATGA 59.559 45.455 0.00 0.00 42.99 2.92
7071 11629 3.117701 TGCGGATATTTTCCTGGGATGAA 60.118 43.478 0.00 0.00 42.99 2.57
7072 11630 4.082125 GCGGATATTTTCCTGGGATGAAT 58.918 43.478 0.00 0.00 42.99 2.57
7073 11631 4.082571 GCGGATATTTTCCTGGGATGAATG 60.083 45.833 0.00 0.00 42.99 2.67
7074 11632 4.460382 CGGATATTTTCCTGGGATGAATGG 59.540 45.833 0.00 0.00 42.99 3.16
7075 11633 4.774200 GGATATTTTCCTGGGATGAATGGG 59.226 45.833 0.00 0.00 41.78 4.00
7076 11634 1.864669 TTTTCCTGGGATGAATGGGC 58.135 50.000 0.00 0.00 0.00 5.36
7101 11662 7.574592 GCAAAAGAAAGAGACATGCTTGACTAT 60.575 37.037 6.60 0.00 0.00 2.12
7109 11670 0.179100 ATGCTTGACTATGCGCGTCT 60.179 50.000 4.79 0.00 32.70 4.18
7112 11673 0.917259 CTTGACTATGCGCGTCTGTC 59.083 55.000 21.49 21.49 32.70 3.51
7114 11675 0.456142 TGACTATGCGCGTCTGTCAC 60.456 55.000 24.94 9.61 33.45 3.67
7115 11676 0.179161 GACTATGCGCGTCTGTCACT 60.179 55.000 22.64 0.00 0.00 3.41
7116 11677 0.243907 ACTATGCGCGTCTGTCACTT 59.756 50.000 4.79 0.00 0.00 3.16
7117 11678 1.471287 ACTATGCGCGTCTGTCACTTA 59.529 47.619 4.79 0.00 0.00 2.24
7118 11679 2.094906 ACTATGCGCGTCTGTCACTTAA 60.095 45.455 4.79 0.00 0.00 1.85
7119 11680 1.350193 ATGCGCGTCTGTCACTTAAG 58.650 50.000 8.43 0.00 0.00 1.85
7170 11735 1.359848 CTCAGTCGCCGCTACAAAAT 58.640 50.000 0.00 0.00 0.00 1.82
7229 11794 0.333312 AAGGCGAGAGAGAGGGAGAA 59.667 55.000 0.00 0.00 0.00 2.87
7284 11869 4.039092 GAAGCAGCCAGGCAGGGA 62.039 66.667 15.80 0.00 38.09 4.20
7285 11870 3.574074 GAAGCAGCCAGGCAGGGAA 62.574 63.158 15.80 0.00 38.09 3.97
7286 11871 3.150903 AAGCAGCCAGGCAGGGAAA 62.151 57.895 15.80 0.00 38.09 3.13
7287 11872 3.376918 GCAGCCAGGCAGGGAAAC 61.377 66.667 15.80 0.00 38.09 2.78
7289 11874 1.975407 CAGCCAGGCAGGGAAACAG 60.975 63.158 15.80 0.00 38.09 3.16
7290 11875 2.116125 GCCAGGCAGGGAAACAGT 59.884 61.111 6.55 0.00 38.09 3.55
7292 11877 0.034089 GCCAGGCAGGGAAACAGTAT 60.034 55.000 6.55 0.00 38.09 2.12
7295 11880 3.688414 GCCAGGCAGGGAAACAGTATTAT 60.688 47.826 6.55 0.00 38.09 1.28
7296 11881 4.445735 GCCAGGCAGGGAAACAGTATTATA 60.446 45.833 6.55 0.00 38.09 0.98
7297 11882 5.690865 CCAGGCAGGGAAACAGTATTATAA 58.309 41.667 0.00 0.00 0.00 0.98
7298 11883 5.765182 CCAGGCAGGGAAACAGTATTATAAG 59.235 44.000 0.00 0.00 0.00 1.73
7299 11884 6.409234 CCAGGCAGGGAAACAGTATTATAAGA 60.409 42.308 0.00 0.00 0.00 2.10
7300 11885 7.054124 CAGGCAGGGAAACAGTATTATAAGAA 58.946 38.462 0.00 0.00 0.00 2.52
7301 11886 7.227512 CAGGCAGGGAAACAGTATTATAAGAAG 59.772 40.741 0.00 0.00 0.00 2.85
7302 11887 7.127339 AGGCAGGGAAACAGTATTATAAGAAGA 59.873 37.037 0.00 0.00 0.00 2.87
7303 11888 7.773690 GGCAGGGAAACAGTATTATAAGAAGAA 59.226 37.037 0.00 0.00 0.00 2.52
7304 11889 8.831550 GCAGGGAAACAGTATTATAAGAAGAAG 58.168 37.037 0.00 0.00 0.00 2.85
7305 11890 9.331282 CAGGGAAACAGTATTATAAGAAGAAGG 57.669 37.037 0.00 0.00 0.00 3.46
7306 11891 8.495260 AGGGAAACAGTATTATAAGAAGAAGGG 58.505 37.037 0.00 0.00 0.00 3.95
7307 11892 8.491958 GGGAAACAGTATTATAAGAAGAAGGGA 58.508 37.037 0.00 0.00 0.00 4.20
7308 11893 9.327628 GGAAACAGTATTATAAGAAGAAGGGAC 57.672 37.037 0.00 0.00 0.00 4.46
7309 11894 9.886132 GAAACAGTATTATAAGAAGAAGGGACA 57.114 33.333 0.00 0.00 0.00 4.02
7317 11902 9.853177 ATTATAAGAAGAAGGGACAATTGTAGG 57.147 33.333 11.95 0.00 0.00 3.18
7318 11903 4.576330 AGAAGAAGGGACAATTGTAGGG 57.424 45.455 11.95 0.00 0.00 3.53
7319 11904 2.808906 AGAAGGGACAATTGTAGGGC 57.191 50.000 11.95 0.00 0.00 5.19
7320 11905 1.992557 AGAAGGGACAATTGTAGGGCA 59.007 47.619 11.95 0.00 0.00 5.36
7321 11906 2.025887 AGAAGGGACAATTGTAGGGCAG 60.026 50.000 11.95 0.00 0.00 4.85
7322 11907 0.625849 AGGGACAATTGTAGGGCAGG 59.374 55.000 11.95 0.00 0.00 4.85
7323 11908 0.623723 GGGACAATTGTAGGGCAGGA 59.376 55.000 11.95 0.00 0.00 3.86
7324 11909 1.005450 GGGACAATTGTAGGGCAGGAA 59.995 52.381 11.95 0.00 0.00 3.36
7325 11910 2.556559 GGGACAATTGTAGGGCAGGAAA 60.557 50.000 11.95 0.00 0.00 3.13
7326 11911 3.161866 GGACAATTGTAGGGCAGGAAAA 58.838 45.455 11.95 0.00 0.00 2.29
7327 11912 3.769300 GGACAATTGTAGGGCAGGAAAAT 59.231 43.478 11.95 0.00 0.00 1.82
7328 11913 4.222810 GGACAATTGTAGGGCAGGAAAATT 59.777 41.667 11.95 0.00 0.00 1.82
7329 11914 5.279960 GGACAATTGTAGGGCAGGAAAATTT 60.280 40.000 11.95 0.00 0.00 1.82
7330 11915 6.071051 GGACAATTGTAGGGCAGGAAAATTTA 60.071 38.462 11.95 0.00 0.00 1.40
7331 11916 7.309770 ACAATTGTAGGGCAGGAAAATTTAA 57.690 32.000 9.97 0.00 0.00 1.52
7332 11917 7.740805 ACAATTGTAGGGCAGGAAAATTTAAA 58.259 30.769 9.97 0.00 0.00 1.52
7333 11918 8.214364 ACAATTGTAGGGCAGGAAAATTTAAAA 58.786 29.630 9.97 0.00 0.00 1.52
7334 11919 8.720562 CAATTGTAGGGCAGGAAAATTTAAAAG 58.279 33.333 0.00 0.00 0.00 2.27
7335 11920 6.987403 TGTAGGGCAGGAAAATTTAAAAGT 57.013 33.333 0.00 0.00 0.00 2.66
7336 11921 7.368198 TGTAGGGCAGGAAAATTTAAAAGTT 57.632 32.000 0.00 0.00 0.00 2.66
7337 11922 7.797062 TGTAGGGCAGGAAAATTTAAAAGTTT 58.203 30.769 0.00 0.00 0.00 2.66
7338 11923 8.925338 TGTAGGGCAGGAAAATTTAAAAGTTTA 58.075 29.630 0.00 0.00 0.00 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 66 1.679977 GCAGGAGCAATCCAGGCAA 60.680 57.895 6.20 0.00 41.58 4.52
102 163 4.232905 TGGAGACAGGGAAGGGTG 57.767 61.111 0.00 0.00 35.01 4.61
162 223 3.969287 ACAGAAGCTGCTATCAGTCAA 57.031 42.857 0.90 0.00 42.29 3.18
163 224 3.969287 AACAGAAGCTGCTATCAGTCA 57.031 42.857 0.90 0.00 42.29 3.41
189 250 1.077429 GCCGAAGCCCTCAATTCCT 60.077 57.895 0.00 0.00 0.00 3.36
210 271 3.227276 CTGGCGAGCGGGGATACT 61.227 66.667 0.00 0.00 0.00 2.12
211 272 4.971125 GCTGGCGAGCGGGGATAC 62.971 72.222 4.51 0.00 34.87 2.24
251 312 2.732619 GGGTTACCCGAGAGCCCAG 61.733 68.421 3.99 0.00 39.13 4.45
291 352 3.000727 CCGAACTCTCGTAAAGCCAAAT 58.999 45.455 0.00 0.00 43.87 2.32
419 489 7.387948 CCGGATGTTAACTAATTTCCTGATAGG 59.612 40.741 7.22 0.00 36.46 2.57
473 543 6.150140 GCTGATTAAATGGCCCTCTAATACAG 59.850 42.308 0.00 10.32 0.00 2.74
513 583 6.183360 GGTCCCAAATTTCGAATCATCAATCT 60.183 38.462 0.00 0.00 0.00 2.40
645 715 0.835971 TAGGTGCCTCTGGTTGCTGA 60.836 55.000 0.00 0.00 0.00 4.26
646 716 0.036732 TTAGGTGCCTCTGGTTGCTG 59.963 55.000 0.00 0.00 0.00 4.41
647 717 0.036875 GTTAGGTGCCTCTGGTTGCT 59.963 55.000 0.00 0.00 0.00 3.91
648 718 0.036875 AGTTAGGTGCCTCTGGTTGC 59.963 55.000 0.00 0.00 0.00 4.17
649 719 1.347707 TCAGTTAGGTGCCTCTGGTTG 59.652 52.381 0.00 0.00 0.00 3.77
650 720 1.729586 TCAGTTAGGTGCCTCTGGTT 58.270 50.000 0.00 0.00 0.00 3.67
651 721 1.958288 ATCAGTTAGGTGCCTCTGGT 58.042 50.000 0.00 0.00 0.00 4.00
652 722 2.223829 CGTATCAGTTAGGTGCCTCTGG 60.224 54.545 0.00 0.00 0.00 3.86
653 723 2.688446 TCGTATCAGTTAGGTGCCTCTG 59.312 50.000 0.00 0.00 0.00 3.35
654 724 2.688958 GTCGTATCAGTTAGGTGCCTCT 59.311 50.000 0.00 0.00 0.00 3.69
655 725 2.688958 AGTCGTATCAGTTAGGTGCCTC 59.311 50.000 0.00 0.00 0.00 4.70
656 726 2.736347 AGTCGTATCAGTTAGGTGCCT 58.264 47.619 0.00 0.00 0.00 4.75
657 727 3.521947 AAGTCGTATCAGTTAGGTGCC 57.478 47.619 0.00 0.00 0.00 5.01
658 728 8.813643 ATAAATAAGTCGTATCAGTTAGGTGC 57.186 34.615 0.00 0.00 0.00 5.01
683 753 9.391006 ACAGTCATTAAGTTCTAACAACAGAAA 57.609 29.630 0.00 0.00 36.34 2.52
684 754 8.958119 ACAGTCATTAAGTTCTAACAACAGAA 57.042 30.769 0.00 0.00 32.11 3.02
685 755 8.958119 AACAGTCATTAAGTTCTAACAACAGA 57.042 30.769 0.00 0.00 0.00 3.41
694 764 9.630098 CAATGCAATAAACAGTCATTAAGTTCT 57.370 29.630 0.00 0.00 0.00 3.01
695 765 9.624697 TCAATGCAATAAACAGTCATTAAGTTC 57.375 29.630 0.00 0.00 0.00 3.01
697 767 9.793252 GATCAATGCAATAAACAGTCATTAAGT 57.207 29.630 0.00 0.00 0.00 2.24
698 768 9.791820 TGATCAATGCAATAAACAGTCATTAAG 57.208 29.630 0.00 0.00 0.00 1.85
699 769 9.791820 CTGATCAATGCAATAAACAGTCATTAA 57.208 29.630 0.00 0.00 0.00 1.40
700 770 7.916977 GCTGATCAATGCAATAAACAGTCATTA 59.083 33.333 0.00 0.00 0.00 1.90
701 771 6.755141 GCTGATCAATGCAATAAACAGTCATT 59.245 34.615 0.00 0.00 0.00 2.57
702 772 6.127563 TGCTGATCAATGCAATAAACAGTCAT 60.128 34.615 7.14 0.00 36.15 3.06
703 773 5.183522 TGCTGATCAATGCAATAAACAGTCA 59.816 36.000 7.14 9.35 36.15 3.41
704 774 5.643664 TGCTGATCAATGCAATAAACAGTC 58.356 37.500 7.14 7.63 36.15 3.51
705 775 5.648178 TGCTGATCAATGCAATAAACAGT 57.352 34.783 7.14 0.00 36.15 3.55
713 783 0.527113 CCGGTTGCTGATCAATGCAA 59.473 50.000 16.09 16.09 45.40 4.08
714 784 0.322366 TCCGGTTGCTGATCAATGCA 60.322 50.000 5.58 5.58 36.99 3.96
715 785 0.379669 CTCCGGTTGCTGATCAATGC 59.620 55.000 0.00 0.00 36.99 3.56
716 786 1.019673 CCTCCGGTTGCTGATCAATG 58.980 55.000 0.00 0.00 36.99 2.82
717 787 0.749454 GCCTCCGGTTGCTGATCAAT 60.749 55.000 0.00 0.00 36.99 2.57
718 788 1.377202 GCCTCCGGTTGCTGATCAA 60.377 57.895 0.00 0.00 0.00 2.57
719 789 2.268920 GCCTCCGGTTGCTGATCA 59.731 61.111 0.00 0.00 0.00 2.92
720 790 2.109126 GTGCCTCCGGTTGCTGATC 61.109 63.158 16.71 0.00 0.00 2.92
721 791 2.045926 GTGCCTCCGGTTGCTGAT 60.046 61.111 16.71 0.00 0.00 2.90
722 792 4.329545 GGTGCCTCCGGTTGCTGA 62.330 66.667 16.71 0.00 0.00 4.26
754 824 7.013823 AGAATGCAGGATATGTTGCTACTAT 57.986 36.000 8.89 0.00 40.87 2.12
763 834 7.844009 ACAATTTCAAAGAATGCAGGATATGT 58.156 30.769 0.00 0.00 0.00 2.29
799 870 9.869844 CAAAAACACTAATACTGAGAAAGTGAG 57.130 33.333 7.70 0.00 40.26 3.51
800 871 9.607988 TCAAAAACACTAATACTGAGAAAGTGA 57.392 29.630 7.70 0.00 40.26 3.41
803 874 9.831737 CCATCAAAAACACTAATACTGAGAAAG 57.168 33.333 0.00 0.00 0.00 2.62
804 875 8.296713 GCCATCAAAAACACTAATACTGAGAAA 58.703 33.333 0.00 0.00 0.00 2.52
805 876 7.665559 AGCCATCAAAAACACTAATACTGAGAA 59.334 33.333 0.00 0.00 0.00 2.87
806 877 7.119699 CAGCCATCAAAAACACTAATACTGAGA 59.880 37.037 0.00 0.00 0.00 3.27
807 878 7.119699 TCAGCCATCAAAAACACTAATACTGAG 59.880 37.037 0.00 0.00 0.00 3.35
840 913 7.964604 ACGGATATAAAATGAAGTAAGAGCC 57.035 36.000 0.00 0.00 0.00 4.70
904 977 4.814771 CAGCCTTAACTATTACGGAAAGGG 59.185 45.833 0.00 0.00 35.17 3.95
913 986 9.216117 GAAACAAGAAGTCAGCCTTAACTATTA 57.784 33.333 0.00 0.00 32.03 0.98
916 989 5.995897 GGAAACAAGAAGTCAGCCTTAACTA 59.004 40.000 0.00 0.00 32.03 2.24
1245 1321 9.636789 AATTGATTGATTTGATCTCTGGACATA 57.363 29.630 0.00 0.00 0.00 2.29
1361 1450 4.775236 AGCTCCATCTTCATAAACCAGAC 58.225 43.478 0.00 0.00 0.00 3.51
1467 1556 6.916360 AGATAAGAAAAAGGTCATTGGCAA 57.084 33.333 0.68 0.68 0.00 4.52
1470 1559 9.546428 AAACAAAGATAAGAAAAAGGTCATTGG 57.454 29.630 0.00 0.00 0.00 3.16
1557 1646 2.030717 ACTAACAGCACTCTCTGTCACG 60.031 50.000 0.00 0.00 45.77 4.35
1589 1678 6.144402 CACAAAACTCACATTTTCTATGTGCC 59.856 38.462 11.92 0.00 46.49 5.01
1643 1732 7.333423 GGTTATGTCTTACAAACATGTAGCAGA 59.667 37.037 0.00 0.00 37.86 4.26
1800 1951 0.804989 GCCAACAAACCTCAGGATCG 59.195 55.000 0.00 0.00 0.00 3.69
1822 1973 8.793592 GGAATTTCTTAAGGACAGTGTATTGTT 58.206 33.333 1.85 0.00 0.00 2.83
1823 1974 7.393515 GGGAATTTCTTAAGGACAGTGTATTGT 59.606 37.037 1.85 0.00 0.00 2.71
2302 2475 2.486203 TCGTCATACCACATGCCAAAAC 59.514 45.455 0.00 0.00 0.00 2.43
2347 2520 7.969314 TCTACAAACAAAGCAAAAACCAAATC 58.031 30.769 0.00 0.00 0.00 2.17
2349 2522 7.442666 AGTTCTACAAACAAAGCAAAAACCAAA 59.557 29.630 0.00 0.00 0.00 3.28
2374 2547 2.544486 GCTTCCAGCAAGGTCAACAAAG 60.544 50.000 0.00 0.00 41.89 2.77
2507 2680 7.940137 TCCTATGTAGAAGTGCCTTTACAAAAA 59.060 33.333 10.65 0.00 30.64 1.94
2566 2750 6.587608 GGAACTAGTTTTCAAATGAATGCAGG 59.412 38.462 10.02 0.00 33.54 4.85
2617 2801 9.871238 CCAACAAATAGCTAGAGTTAAGACTAA 57.129 33.333 0.00 0.00 35.88 2.24
2651 2835 4.202357 TGCCACACTAACTTGAGAGATTGT 60.202 41.667 0.00 0.00 0.00 2.71
2653 2837 4.623932 TGCCACACTAACTTGAGAGATT 57.376 40.909 0.00 0.00 0.00 2.40
2654 2838 4.040952 AGTTGCCACACTAACTTGAGAGAT 59.959 41.667 0.00 0.00 33.59 2.75
2655 2839 3.388024 AGTTGCCACACTAACTTGAGAGA 59.612 43.478 0.00 0.00 33.59 3.10
2656 2840 3.733337 AGTTGCCACACTAACTTGAGAG 58.267 45.455 0.00 0.00 33.59 3.20
2657 2841 3.838244 AGTTGCCACACTAACTTGAGA 57.162 42.857 0.00 0.00 33.59 3.27
2658 2842 4.083802 GCTAAGTTGCCACACTAACTTGAG 60.084 45.833 11.40 7.07 44.36 3.02
2659 2843 3.813166 GCTAAGTTGCCACACTAACTTGA 59.187 43.478 11.40 0.00 44.36 3.02
2660 2844 3.815401 AGCTAAGTTGCCACACTAACTTG 59.185 43.478 11.40 4.58 44.36 3.16
2661 2845 4.086706 AGCTAAGTTGCCACACTAACTT 57.913 40.909 0.00 0.00 45.89 2.66
2662 2846 3.771577 AGCTAAGTTGCCACACTAACT 57.228 42.857 0.00 0.00 38.70 2.24
2663 2847 4.566987 AGTAGCTAAGTTGCCACACTAAC 58.433 43.478 0.00 0.00 0.00 2.34
2664 2848 4.884668 AGTAGCTAAGTTGCCACACTAA 57.115 40.909 0.00 0.00 0.00 2.24
2665 2849 5.988310 TTAGTAGCTAAGTTGCCACACTA 57.012 39.130 0.00 0.00 0.00 2.74
2666 2850 4.884668 TTAGTAGCTAAGTTGCCACACT 57.115 40.909 0.00 0.00 0.00 3.55
2667 2851 5.175859 TCATTAGTAGCTAAGTTGCCACAC 58.824 41.667 0.00 0.00 29.02 3.82
2668 2852 5.414789 TCATTAGTAGCTAAGTTGCCACA 57.585 39.130 0.00 0.00 29.02 4.17
2683 2867 8.798859 AGCACTTCTGTATGAAATTCATTAGT 57.201 30.769 14.15 7.46 38.26 2.24
2697 2881 4.141937 ACACTTCAGTTGAGCACTTCTGTA 60.142 41.667 0.00 0.00 30.92 2.74
2699 2883 3.201290 ACACTTCAGTTGAGCACTTCTG 58.799 45.455 0.00 0.00 30.92 3.02
2708 2893 7.036996 TGCATTTCATTTACACTTCAGTTGA 57.963 32.000 0.00 0.00 0.00 3.18
2711 2896 7.175467 TCTGATGCATTTCATTTACACTTCAGT 59.825 33.333 0.00 0.00 35.05 3.41
2713 2898 7.451501 TCTGATGCATTTCATTTACACTTCA 57.548 32.000 0.00 0.00 35.05 3.02
2804 2993 5.957842 ATAACTCGCTCAAAATTGTTGGA 57.042 34.783 0.00 0.00 0.00 3.53
2942 3217 7.062322 TGAGTTTTATCACCCTGCAATATGAT 58.938 34.615 10.20 10.20 35.91 2.45
2944 3219 6.698008 TGAGTTTTATCACCCTGCAATATG 57.302 37.500 0.00 0.00 0.00 1.78
3071 3396 2.094675 ACCATGGTTCATGCTGCTAAC 58.905 47.619 13.00 3.04 40.20 2.34
3124 3449 5.181245 GGAGCAAACTGAACTTAATGCAGTA 59.819 40.000 0.00 0.00 41.65 2.74
3146 3471 6.208599 GGTTCATTAGAAAAACATGTGGAGGA 59.791 38.462 0.00 0.00 35.08 3.71
3153 3478 8.870160 TTTGTCAGGTTCATTAGAAAAACATG 57.130 30.769 0.00 0.00 36.36 3.21
3237 3562 9.686683 AACTCAGGTATAATTTGTAGCATCTTT 57.313 29.630 5.37 0.00 0.00 2.52
3238 3563 9.686683 AAACTCAGGTATAATTTGTAGCATCTT 57.313 29.630 5.37 0.00 0.00 2.40
3239 3564 9.331282 GAAACTCAGGTATAATTTGTAGCATCT 57.669 33.333 5.37 0.00 0.00 2.90
3240 3565 9.109393 TGAAACTCAGGTATAATTTGTAGCATC 57.891 33.333 5.37 0.00 0.00 3.91
3241 3566 9.113838 CTGAAACTCAGGTATAATTTGTAGCAT 57.886 33.333 5.37 0.00 40.71 3.79
3242 3567 8.318412 TCTGAAACTCAGGTATAATTTGTAGCA 58.682 33.333 3.92 0.00 44.39 3.49
3243 3568 8.718102 TCTGAAACTCAGGTATAATTTGTAGC 57.282 34.615 3.92 0.00 44.39 3.58
3262 3587 1.064017 AGGGGTGCACAGTTTCTGAAA 60.064 47.619 20.43 0.00 35.18 2.69
3263 3588 0.550914 AGGGGTGCACAGTTTCTGAA 59.449 50.000 20.43 0.00 35.18 3.02
3264 3589 0.550914 AAGGGGTGCACAGTTTCTGA 59.449 50.000 20.43 0.00 35.18 3.27
3265 3590 0.954452 GAAGGGGTGCACAGTTTCTG 59.046 55.000 20.43 0.00 37.52 3.02
3267 3592 0.954452 CTGAAGGGGTGCACAGTTTC 59.046 55.000 20.43 17.34 0.00 2.78
3268 3593 1.109323 GCTGAAGGGGTGCACAGTTT 61.109 55.000 20.43 8.90 33.57 2.66
3269 3594 1.529244 GCTGAAGGGGTGCACAGTT 60.529 57.895 20.43 8.26 33.57 3.16
3270 3595 2.113986 GCTGAAGGGGTGCACAGT 59.886 61.111 20.43 0.00 33.57 3.55
3271 3596 0.896940 ATTGCTGAAGGGGTGCACAG 60.897 55.000 20.43 7.30 0.00 3.66
3272 3597 1.153524 ATTGCTGAAGGGGTGCACA 59.846 52.632 20.43 0.00 0.00 4.57
3273 3598 1.588082 CATTGCTGAAGGGGTGCAC 59.412 57.895 8.80 8.80 0.00 4.57
3274 3599 2.277591 GCATTGCTGAAGGGGTGCA 61.278 57.895 0.16 0.00 33.09 4.57
3275 3600 1.538687 AAGCATTGCTGAAGGGGTGC 61.539 55.000 12.82 0.00 39.62 5.01
3276 3601 1.838112 TAAGCATTGCTGAAGGGGTG 58.162 50.000 12.82 0.00 39.62 4.61
3277 3602 2.834638 ATAAGCATTGCTGAAGGGGT 57.165 45.000 12.82 0.00 39.62 4.95
3278 3603 5.796424 AATTATAAGCATTGCTGAAGGGG 57.204 39.130 12.82 0.00 39.62 4.79
3279 3604 7.750229 TCTAATTATAAGCATTGCTGAAGGG 57.250 36.000 12.82 0.00 39.62 3.95
3280 3605 9.674824 CTTTCTAATTATAAGCATTGCTGAAGG 57.325 33.333 12.82 5.50 39.62 3.46
3281 3606 9.674824 CCTTTCTAATTATAAGCATTGCTGAAG 57.325 33.333 12.82 0.00 39.62 3.02
3282 3607 9.189156 ACCTTTCTAATTATAAGCATTGCTGAA 57.811 29.630 12.82 7.58 39.62 3.02
3283 3608 8.752005 ACCTTTCTAATTATAAGCATTGCTGA 57.248 30.769 12.82 4.73 39.62 4.26
3295 3620 9.780186 GCTAGTCCACATAACCTTTCTAATTAT 57.220 33.333 0.00 0.00 0.00 1.28
3296 3621 8.764558 TGCTAGTCCACATAACCTTTCTAATTA 58.235 33.333 0.00 0.00 0.00 1.40
3297 3622 7.630082 TGCTAGTCCACATAACCTTTCTAATT 58.370 34.615 0.00 0.00 0.00 1.40
3298 3623 7.092846 ACTGCTAGTCCACATAACCTTTCTAAT 60.093 37.037 0.00 0.00 0.00 1.73
3299 3624 6.212791 ACTGCTAGTCCACATAACCTTTCTAA 59.787 38.462 0.00 0.00 0.00 2.10
3300 3625 5.720041 ACTGCTAGTCCACATAACCTTTCTA 59.280 40.000 0.00 0.00 0.00 2.10
3301 3626 4.532521 ACTGCTAGTCCACATAACCTTTCT 59.467 41.667 0.00 0.00 0.00 2.52
3302 3627 4.833390 ACTGCTAGTCCACATAACCTTTC 58.167 43.478 0.00 0.00 0.00 2.62
3303 3628 4.910458 ACTGCTAGTCCACATAACCTTT 57.090 40.909 0.00 0.00 0.00 3.11
3304 3629 4.910458 AACTGCTAGTCCACATAACCTT 57.090 40.909 0.00 0.00 0.00 3.50
3305 3630 4.141914 GCTAACTGCTAGTCCACATAACCT 60.142 45.833 0.00 0.00 38.95 3.50
3306 3631 4.120589 GCTAACTGCTAGTCCACATAACC 58.879 47.826 0.00 0.00 38.95 2.85
3307 3632 4.755411 TGCTAACTGCTAGTCCACATAAC 58.245 43.478 0.00 0.00 43.37 1.89
3308 3633 5.363868 AGATGCTAACTGCTAGTCCACATAA 59.636 40.000 0.00 0.00 43.37 1.90
3309 3634 4.895889 AGATGCTAACTGCTAGTCCACATA 59.104 41.667 0.00 0.00 43.37 2.29
3310 3635 3.708631 AGATGCTAACTGCTAGTCCACAT 59.291 43.478 0.00 0.00 43.37 3.21
3311 3636 3.099905 AGATGCTAACTGCTAGTCCACA 58.900 45.455 0.00 0.00 43.37 4.17
3312 3637 3.452474 CAGATGCTAACTGCTAGTCCAC 58.548 50.000 0.00 0.00 43.37 4.02
3313 3638 3.808466 CAGATGCTAACTGCTAGTCCA 57.192 47.619 0.00 0.00 43.37 4.02
3321 3646 5.121811 AGAAACCTATGCAGATGCTAACTG 58.878 41.667 6.35 0.00 42.66 3.16
3322 3647 5.365021 AGAAACCTATGCAGATGCTAACT 57.635 39.130 6.35 0.00 42.66 2.24
3323 3648 7.553881 TTAAGAAACCTATGCAGATGCTAAC 57.446 36.000 6.35 0.00 42.66 2.34
3324 3649 8.752005 AATTAAGAAACCTATGCAGATGCTAA 57.248 30.769 6.35 0.00 42.66 3.09
3325 3650 8.752005 AAATTAAGAAACCTATGCAGATGCTA 57.248 30.769 6.35 0.00 42.66 3.49
3326 3651 7.651027 AAATTAAGAAACCTATGCAGATGCT 57.349 32.000 6.35 0.00 42.66 3.79
3327 3652 9.801873 TTAAAATTAAGAAACCTATGCAGATGC 57.198 29.630 0.00 0.00 42.50 3.91
3331 3656 9.076596 GCTGTTAAAATTAAGAAACCTATGCAG 57.923 33.333 0.00 0.00 0.00 4.41
3332 3657 8.802267 AGCTGTTAAAATTAAGAAACCTATGCA 58.198 29.630 0.00 0.00 0.00 3.96
3342 3667 9.383519 CCTCAGACATAGCTGTTAAAATTAAGA 57.616 33.333 0.00 0.00 35.14 2.10
3343 3668 9.383519 TCCTCAGACATAGCTGTTAAAATTAAG 57.616 33.333 0.00 0.00 35.14 1.85
3344 3669 9.733556 TTCCTCAGACATAGCTGTTAAAATTAA 57.266 29.630 0.00 0.00 35.14 1.40
3345 3670 9.733556 TTTCCTCAGACATAGCTGTTAAAATTA 57.266 29.630 0.00 0.00 35.14 1.40
3346 3671 8.635765 TTTCCTCAGACATAGCTGTTAAAATT 57.364 30.769 0.00 0.00 35.14 1.82
3347 3672 8.635765 TTTTCCTCAGACATAGCTGTTAAAAT 57.364 30.769 0.00 0.00 35.14 1.82
3348 3673 7.936847 TCTTTTCCTCAGACATAGCTGTTAAAA 59.063 33.333 0.00 0.00 35.14 1.52
3349 3674 7.450074 TCTTTTCCTCAGACATAGCTGTTAAA 58.550 34.615 0.00 0.00 35.14 1.52
3350 3675 7.004555 TCTTTTCCTCAGACATAGCTGTTAA 57.995 36.000 0.00 0.00 35.14 2.01
3351 3676 6.211584 ACTCTTTTCCTCAGACATAGCTGTTA 59.788 38.462 0.00 0.00 35.14 2.41
3352 3677 5.012561 ACTCTTTTCCTCAGACATAGCTGTT 59.987 40.000 0.00 0.00 35.14 3.16
3353 3678 4.530161 ACTCTTTTCCTCAGACATAGCTGT 59.470 41.667 0.00 0.00 38.67 4.40
3354 3679 5.083533 ACTCTTTTCCTCAGACATAGCTG 57.916 43.478 0.00 0.00 37.24 4.24
3355 3680 5.753721 AACTCTTTTCCTCAGACATAGCT 57.246 39.130 0.00 0.00 0.00 3.32
3356 3681 6.428159 TGAAAACTCTTTTCCTCAGACATAGC 59.572 38.462 5.26 0.00 46.49 2.97
3357 3682 7.969536 TGAAAACTCTTTTCCTCAGACATAG 57.030 36.000 5.26 0.00 46.49 2.23
3358 3683 7.607991 GGATGAAAACTCTTTTCCTCAGACATA 59.392 37.037 12.10 0.00 46.49 2.29
3359 3684 6.432472 GGATGAAAACTCTTTTCCTCAGACAT 59.568 38.462 12.10 0.00 46.49 3.06
3360 3685 5.765182 GGATGAAAACTCTTTTCCTCAGACA 59.235 40.000 12.10 0.00 46.49 3.41
3361 3686 6.000840 AGGATGAAAACTCTTTTCCTCAGAC 58.999 40.000 12.10 0.40 46.49 3.51
3362 3687 6.192970 AGGATGAAAACTCTTTTCCTCAGA 57.807 37.500 12.10 0.00 46.49 3.27
3363 3688 6.264067 ACAAGGATGAAAACTCTTTTCCTCAG 59.736 38.462 12.10 6.42 46.49 3.35
3364 3689 6.129179 ACAAGGATGAAAACTCTTTTCCTCA 58.871 36.000 12.10 0.00 46.49 3.86
3365 3690 6.566753 CGACAAGGATGAAAACTCTTTTCCTC 60.567 42.308 5.26 5.06 46.49 3.71
3366 3691 5.239525 CGACAAGGATGAAAACTCTTTTCCT 59.760 40.000 5.26 0.00 46.49 3.36
3367 3692 5.452777 CGACAAGGATGAAAACTCTTTTCC 58.547 41.667 5.26 0.00 46.49 3.13
3368 3693 5.238650 TCCGACAAGGATGAAAACTCTTTTC 59.761 40.000 1.24 1.24 45.98 2.29
3369 3694 5.130350 TCCGACAAGGATGAAAACTCTTTT 58.870 37.500 0.00 0.00 45.98 2.27
3370 3695 4.714632 TCCGACAAGGATGAAAACTCTTT 58.285 39.130 0.00 0.00 45.98 2.52
3371 3696 4.351874 TCCGACAAGGATGAAAACTCTT 57.648 40.909 0.00 0.00 45.98 2.85
3389 3714 4.568152 AATTGGTCTGTTTGAAGTTCCG 57.432 40.909 0.00 0.00 0.00 4.30
3431 3756 8.081633 CCGAGCTGCAATCCAAATTTATATTTA 58.918 33.333 1.02 0.00 32.75 1.40
3456 3781 4.695928 GGTATGTGTCCACTTCTTTTCTCC 59.304 45.833 0.00 0.00 0.00 3.71
3649 3974 4.440802 CCTCATAGTCACAGCTCTTACCAC 60.441 50.000 0.00 0.00 0.00 4.16
3675 4003 4.186856 ACAACCAAAAGGTGTGACAAAG 57.813 40.909 0.00 0.00 0.00 2.77
3679 4007 3.859411 TCAACAACCAAAAGGTGTGAC 57.141 42.857 0.00 0.00 0.00 3.67
3680 4008 4.561105 GTTTCAACAACCAAAAGGTGTGA 58.439 39.130 0.00 0.00 0.00 3.58
3681 4009 3.682377 GGTTTCAACAACCAAAAGGTGTG 59.318 43.478 0.00 0.00 40.03 3.82
3682 4010 3.325135 TGGTTTCAACAACCAAAAGGTGT 59.675 39.130 3.90 0.00 46.44 4.16
3683 4011 3.931578 TGGTTTCAACAACCAAAAGGTG 58.068 40.909 3.90 0.00 46.44 4.00
3781 4109 3.476552 CAGTCCTTTGTCCTGCTTGTAA 58.523 45.455 0.00 0.00 0.00 2.41
3935 4279 9.710818 AAGGTTCACTCTATTATACTAGACCAA 57.289 33.333 0.00 0.00 0.00 3.67
3943 4288 7.386299 CCATCTGCAAGGTTCACTCTATTATAC 59.614 40.741 0.00 0.00 0.00 1.47
3953 4298 4.943705 TCTATTTCCATCTGCAAGGTTCAC 59.056 41.667 0.00 0.00 0.00 3.18
4015 4360 4.974275 TCTTTCGTAGTTCTTCGAGTTGTG 59.026 41.667 2.36 0.00 37.38 3.33
4029 4374 4.188247 TGTCACCCATCTTCTTTCGTAG 57.812 45.455 0.00 0.00 0.00 3.51
4248 4639 4.853268 GCTTTAGCATAAATGGAGCAGTC 58.147 43.478 0.00 0.00 41.59 3.51
4434 4825 7.201848 ATCTCAACATCTCTGTTCTGAGATCTC 60.202 40.741 16.21 16.21 46.97 2.75
4575 4966 4.466828 GAAGTGACATGACCAATTTGTCG 58.533 43.478 0.00 0.00 42.07 4.35
4962 5353 0.735632 GCTCCTTCAGCTCTGTCACG 60.736 60.000 0.00 0.00 45.83 4.35
5040 5448 6.979817 CAGAATGACCAACAAGTGAATTTGAA 59.020 34.615 0.00 0.00 39.69 2.69
5041 5449 6.461370 CCAGAATGACCAACAAGTGAATTTGA 60.461 38.462 0.00 0.00 39.69 2.69
5097 5507 4.762251 AGACCTGTAAGAACATTTCAAGGC 59.238 41.667 0.00 0.00 34.07 4.35
5229 5639 1.069432 GGATAATGTGCTGCATCTGCG 60.069 52.381 5.27 0.00 45.83 5.18
5269 5679 3.366070 GGGTCCTGTGTATGATCGATACG 60.366 52.174 0.00 0.00 40.07 3.06
5424 5834 0.610174 TGAGGCTCGAGAAACTGCAT 59.390 50.000 18.75 0.00 0.00 3.96
5523 5933 9.930158 ATCTCTCTTTTCTAGTACTATTCCACT 57.070 33.333 2.33 0.00 0.00 4.00
5548 6019 2.423577 GCAGTAGGGTTTCGACAACAT 58.576 47.619 10.99 0.00 0.00 2.71
5551 6022 0.675083 TCGCAGTAGGGTTTCGACAA 59.325 50.000 0.00 0.00 0.00 3.18
5555 6026 1.560923 CTCATCGCAGTAGGGTTTCG 58.439 55.000 0.00 0.00 0.00 3.46
5606 6077 8.850156 GCATAAATCATAGACAAGGTTATGGTT 58.150 33.333 0.00 0.00 33.25 3.67
5611 6082 8.978874 ATGTGCATAAATCATAGACAAGGTTA 57.021 30.769 0.00 0.00 0.00 2.85
5626 6097 7.756558 TGAACATGACGAAATATGTGCATAAA 58.243 30.769 0.00 0.00 37.80 1.40
5730 6201 3.319137 TGATGGTGAACTAGCACAGAC 57.681 47.619 0.00 0.00 40.04 3.51
5782 6254 6.662414 ATGAACATGACGACGAAATATGTT 57.338 33.333 16.88 16.88 42.68 2.71
5789 6261 3.120095 AGACGTATGAACATGACGACGAA 60.120 43.478 10.46 0.00 39.81 3.85
5790 6262 2.417586 AGACGTATGAACATGACGACGA 59.582 45.455 10.46 0.00 39.81 4.20
5791 6263 2.776765 GAGACGTATGAACATGACGACG 59.223 50.000 10.46 12.93 39.81 5.12
5808 6280 3.383185 ACTGATGCCTAACTAGCAGAGAC 59.617 47.826 0.00 0.00 44.90 3.36
5812 6284 4.399004 AAGACTGATGCCTAACTAGCAG 57.601 45.455 0.00 0.00 44.90 4.24
5857 6331 5.005779 CAGACAAGGACGTGCATATTAACTC 59.994 44.000 10.52 0.00 0.00 3.01
5861 6335 4.081917 TCACAGACAAGGACGTGCATATTA 60.082 41.667 10.52 0.00 0.00 0.98
5871 6345 4.084537 CGTGTTTACATCACAGACAAGGAC 60.085 45.833 0.00 0.00 35.79 3.85
5881 6355 4.242475 TGGACTGATCGTGTTTACATCAC 58.758 43.478 0.00 0.00 0.00 3.06
5891 6365 4.214119 ACATTTTGACTTGGACTGATCGTG 59.786 41.667 0.00 0.00 0.00 4.35
5892 6366 4.389374 ACATTTTGACTTGGACTGATCGT 58.611 39.130 0.00 0.00 0.00 3.73
5894 6368 6.738114 TGAAACATTTTGACTTGGACTGATC 58.262 36.000 0.00 0.00 0.00 2.92
5896 6370 6.320926 TGATGAAACATTTTGACTTGGACTGA 59.679 34.615 0.00 0.00 0.00 3.41
5897 6371 6.506147 TGATGAAACATTTTGACTTGGACTG 58.494 36.000 0.00 0.00 0.00 3.51
5900 6374 6.513230 CGACTGATGAAACATTTTGACTTGGA 60.513 38.462 0.00 0.00 0.00 3.53
5927 6401 5.630680 GCTAAATGGTTTGTGACATTCAGTG 59.369 40.000 0.00 0.00 36.36 3.66
5944 6418 3.490419 GCTGAGCCATTTGGAGCTAAATG 60.490 47.826 13.01 13.01 44.01 2.32
5945 6419 2.692041 GCTGAGCCATTTGGAGCTAAAT 59.308 45.455 0.00 0.00 40.11 1.40
5946 6420 2.094675 GCTGAGCCATTTGGAGCTAAA 58.905 47.619 0.00 0.00 40.11 1.85
5948 6422 0.914644 AGCTGAGCCATTTGGAGCTA 59.085 50.000 0.00 0.00 40.01 3.32
5950 6424 0.893447 AAAGCTGAGCCATTTGGAGC 59.107 50.000 0.00 0.66 37.39 4.70
5951 6425 1.131883 CGAAAGCTGAGCCATTTGGAG 59.868 52.381 0.00 0.00 37.39 3.86
5952 6426 1.167851 CGAAAGCTGAGCCATTTGGA 58.832 50.000 0.00 0.00 37.39 3.53
5953 6427 0.883833 ACGAAAGCTGAGCCATTTGG 59.116 50.000 0.00 0.00 38.53 3.28
5954 6428 2.030893 TGAACGAAAGCTGAGCCATTTG 60.031 45.455 0.00 3.46 0.00 2.32
5955 6429 2.229792 TGAACGAAAGCTGAGCCATTT 58.770 42.857 0.00 0.00 0.00 2.32
5956 6430 1.896220 TGAACGAAAGCTGAGCCATT 58.104 45.000 0.00 0.00 0.00 3.16
5957 6431 2.119801 ATGAACGAAAGCTGAGCCAT 57.880 45.000 0.00 0.00 0.00 4.40
5958 6432 1.896220 AATGAACGAAAGCTGAGCCA 58.104 45.000 0.00 0.00 0.00 4.75
5959 6433 2.997485 AAATGAACGAAAGCTGAGCC 57.003 45.000 0.00 0.00 0.00 4.70
5960 6434 3.121227 GCAAAAATGAACGAAAGCTGAGC 60.121 43.478 0.00 0.00 0.00 4.26
5961 6435 4.043750 TGCAAAAATGAACGAAAGCTGAG 58.956 39.130 0.00 0.00 0.00 3.35
5962 6436 3.796178 GTGCAAAAATGAACGAAAGCTGA 59.204 39.130 0.00 0.00 0.00 4.26
5963 6437 3.551082 TGTGCAAAAATGAACGAAAGCTG 59.449 39.130 0.00 0.00 0.00 4.24
5964 6438 3.779759 TGTGCAAAAATGAACGAAAGCT 58.220 36.364 0.00 0.00 0.00 3.74
5965 6439 4.513000 TTGTGCAAAAATGAACGAAAGC 57.487 36.364 0.00 0.00 0.00 3.51
5966 6440 6.939953 CAATTGTGCAAAAATGAACGAAAG 57.060 33.333 0.00 0.00 0.00 2.62
6165 6639 3.587933 GTCGGCGCTCTCCTCGAT 61.588 66.667 7.64 0.00 34.13 3.59
6224 6698 1.134848 AGCTCGAACATCTCCTTGCTC 60.135 52.381 0.00 0.00 0.00 4.26
6316 6790 2.441901 AGAGCTGAGCCCTCTCCG 60.442 66.667 0.00 0.00 38.58 4.63
6391 6865 0.101399 GAGCATGGACACGACGAGAT 59.899 55.000 0.00 0.00 0.00 2.75
6393 6867 1.517257 GGAGCATGGACACGACGAG 60.517 63.158 0.00 0.00 0.00 4.18
6424 6900 3.577649 TCCTTACTCGAACAAGAGCAG 57.422 47.619 7.14 0.00 41.77 4.24
6471 6948 8.638629 TTTTTATAACCTCTCCCGAAAATTCA 57.361 30.769 0.00 0.00 0.00 2.57
6472 6949 8.737175 ACTTTTTATAACCTCTCCCGAAAATTC 58.263 33.333 0.00 0.00 0.00 2.17
6473 6950 8.520351 CACTTTTTATAACCTCTCCCGAAAATT 58.480 33.333 0.00 0.00 0.00 1.82
6479 6957 5.007724 GCATCACTTTTTATAACCTCTCCCG 59.992 44.000 0.00 0.00 0.00 5.14
6514 6992 5.346181 AAGACAGATAGAGGTAGCCAAAC 57.654 43.478 0.00 0.00 0.00 2.93
6524 7002 3.129462 TGGCAGAACGAAGACAGATAGAG 59.871 47.826 0.00 0.00 0.00 2.43
6528 7006 2.808543 GTTTGGCAGAACGAAGACAGAT 59.191 45.455 0.00 0.00 0.00 2.90
6633 7164 1.486310 GCAGTATGTGATGGAGGTCCA 59.514 52.381 0.00 0.00 45.35 4.02
6635 7166 1.765314 AGGCAGTATGTGATGGAGGTC 59.235 52.381 0.00 0.00 39.31 3.85
6636 7167 1.487976 CAGGCAGTATGTGATGGAGGT 59.512 52.381 0.00 0.00 39.31 3.85
6638 7169 1.590932 GCAGGCAGTATGTGATGGAG 58.409 55.000 0.00 0.00 39.31 3.86
6640 7171 0.820891 GGGCAGGCAGTATGTGATGG 60.821 60.000 0.00 0.00 39.31 3.51
6641 7172 1.162181 CGGGCAGGCAGTATGTGATG 61.162 60.000 0.00 0.00 39.31 3.07
6642 7173 1.146930 CGGGCAGGCAGTATGTGAT 59.853 57.895 0.00 0.00 39.31 3.06
6645 7201 3.402681 AGCGGGCAGGCAGTATGT 61.403 61.111 0.00 0.00 39.31 2.29
6671 7228 2.124942 GCAGGCAGAGGCAGTACC 60.125 66.667 0.00 0.00 43.71 3.34
6678 7235 4.154347 GAGACGGGCAGGCAGAGG 62.154 72.222 0.00 0.00 0.00 3.69
6679 7236 2.570582 GAAGAGACGGGCAGGCAGAG 62.571 65.000 0.00 0.00 0.00 3.35
6680 7237 2.604686 AAGAGACGGGCAGGCAGA 60.605 61.111 0.00 0.00 0.00 4.26
6703 7260 2.122729 CAGTCCAGACCCCCTCCA 59.877 66.667 0.00 0.00 0.00 3.86
6705 7262 0.836400 TTGACAGTCCAGACCCCCTC 60.836 60.000 0.00 0.00 0.00 4.30
6706 7263 0.838122 CTTGACAGTCCAGACCCCCT 60.838 60.000 0.00 0.00 0.00 4.79
6733 7290 5.528690 GCAATGATCACTGCTAATTACAGGA 59.471 40.000 21.32 11.18 39.55 3.86
6808 7365 2.609002 GGAAAAGCAAACAAGCACAAGG 59.391 45.455 0.00 0.00 36.85 3.61
6809 7366 3.062504 GTGGAAAAGCAAACAAGCACAAG 59.937 43.478 0.00 0.00 36.85 3.16
6810 7367 2.999355 GTGGAAAAGCAAACAAGCACAA 59.001 40.909 0.00 0.00 36.85 3.33
6812 7369 2.892374 AGTGGAAAAGCAAACAAGCAC 58.108 42.857 0.00 0.00 36.85 4.40
6813 7370 3.195396 AGAAGTGGAAAAGCAAACAAGCA 59.805 39.130 0.00 0.00 36.85 3.91
6814 7371 3.785486 AGAAGTGGAAAAGCAAACAAGC 58.215 40.909 0.00 0.00 0.00 4.01
6815 7372 4.805719 GGAAGAAGTGGAAAAGCAAACAAG 59.194 41.667 0.00 0.00 0.00 3.16
6852 7413 1.174783 CAGCATCCAGAAGCTTTGCT 58.825 50.000 15.25 15.25 44.05 3.91
6899 7461 0.322975 ATGCACAGTGTCACCCTCTC 59.677 55.000 1.61 0.00 0.00 3.20
6910 8525 5.643348 TGTTCATCGAAGAAATATGCACAGT 59.357 36.000 4.40 0.00 43.58 3.55
6922 11472 6.761242 TGTCTCTTTCTTTTGTTCATCGAAGA 59.239 34.615 0.00 0.00 45.75 2.87
6925 11475 5.051039 CGTGTCTCTTTCTTTTGTTCATCGA 60.051 40.000 0.00 0.00 0.00 3.59
6937 11487 4.551388 CTTAGTCAAGCGTGTCTCTTTCT 58.449 43.478 2.40 0.00 0.00 2.52
6961 11512 9.923143 TTCTCTTTTCTTAATAACTGATGACGA 57.077 29.630 0.00 0.00 0.00 4.20
6974 11525 7.504238 TGGTTGGCTGTATTTCTCTTTTCTTAA 59.496 33.333 0.00 0.00 0.00 1.85
6975 11526 7.001674 TGGTTGGCTGTATTTCTCTTTTCTTA 58.998 34.615 0.00 0.00 0.00 2.10
6978 11529 5.705609 TGGTTGGCTGTATTTCTCTTTTC 57.294 39.130 0.00 0.00 0.00 2.29
6980 11531 5.385198 TCTTGGTTGGCTGTATTTCTCTTT 58.615 37.500 0.00 0.00 0.00 2.52
6983 11534 6.823689 TCTTATCTTGGTTGGCTGTATTTCTC 59.176 38.462 0.00 0.00 0.00 2.87
6985 11536 6.374333 TGTCTTATCTTGGTTGGCTGTATTTC 59.626 38.462 0.00 0.00 0.00 2.17
6987 11538 5.815581 TGTCTTATCTTGGTTGGCTGTATT 58.184 37.500 0.00 0.00 0.00 1.89
6989 11540 4.832248 CTGTCTTATCTTGGTTGGCTGTA 58.168 43.478 0.00 0.00 0.00 2.74
6990 11541 3.679389 CTGTCTTATCTTGGTTGGCTGT 58.321 45.455 0.00 0.00 0.00 4.40
6991 11542 2.421424 GCTGTCTTATCTTGGTTGGCTG 59.579 50.000 0.00 0.00 0.00 4.85
6993 11544 2.421424 CTGCTGTCTTATCTTGGTTGGC 59.579 50.000 0.00 0.00 0.00 4.52
6994 11545 2.421424 GCTGCTGTCTTATCTTGGTTGG 59.579 50.000 0.00 0.00 0.00 3.77
6995 11546 3.341823 AGCTGCTGTCTTATCTTGGTTG 58.658 45.455 0.00 0.00 0.00 3.77
6996 11547 3.710209 AGCTGCTGTCTTATCTTGGTT 57.290 42.857 0.00 0.00 0.00 3.67
6997 11548 3.710209 AAGCTGCTGTCTTATCTTGGT 57.290 42.857 1.35 0.00 0.00 3.67
6998 11549 6.500684 TTTTAAGCTGCTGTCTTATCTTGG 57.499 37.500 1.35 0.00 0.00 3.61
7008 11559 6.494893 TCAAACGATATTTTAAGCTGCTGT 57.505 33.333 1.35 0.00 0.00 4.40
7026 11584 6.089954 GCAAAATGGTGCTCTCTTAATCAAAC 59.910 38.462 0.00 0.00 41.51 2.93
7060 11618 0.709397 TTTGCCCATTCATCCCAGGA 59.291 50.000 0.00 0.00 0.00 3.86
7062 11620 2.459644 TCTTTTGCCCATTCATCCCAG 58.540 47.619 0.00 0.00 0.00 4.45
7063 11621 2.619697 TCTTTTGCCCATTCATCCCA 57.380 45.000 0.00 0.00 0.00 4.37
7066 11624 5.047802 TGTCTCTTTCTTTTGCCCATTCATC 60.048 40.000 0.00 0.00 0.00 2.92
7067 11625 4.834496 TGTCTCTTTCTTTTGCCCATTCAT 59.166 37.500 0.00 0.00 0.00 2.57
7068 11626 4.214310 TGTCTCTTTCTTTTGCCCATTCA 58.786 39.130 0.00 0.00 0.00 2.57
7069 11627 4.853924 TGTCTCTTTCTTTTGCCCATTC 57.146 40.909 0.00 0.00 0.00 2.67
7070 11628 4.562143 GCATGTCTCTTTCTTTTGCCCATT 60.562 41.667 0.00 0.00 0.00 3.16
7071 11629 3.056322 GCATGTCTCTTTCTTTTGCCCAT 60.056 43.478 0.00 0.00 0.00 4.00
7072 11630 2.297033 GCATGTCTCTTTCTTTTGCCCA 59.703 45.455 0.00 0.00 0.00 5.36
7073 11631 2.560105 AGCATGTCTCTTTCTTTTGCCC 59.440 45.455 0.00 0.00 0.00 5.36
7074 11632 3.930634 AGCATGTCTCTTTCTTTTGCC 57.069 42.857 0.00 0.00 0.00 4.52
7075 11633 4.678742 GTCAAGCATGTCTCTTTCTTTTGC 59.321 41.667 0.00 0.00 0.00 3.68
7076 11634 6.069684 AGTCAAGCATGTCTCTTTCTTTTG 57.930 37.500 0.00 0.00 0.00 2.44
7101 11662 0.312729 TCTTAAGTGACAGACGCGCA 59.687 50.000 5.73 0.00 0.00 6.09
7150 11711 1.289109 TTTTGTAGCGGCGACTGAGC 61.289 55.000 12.98 3.59 0.00 4.26
7170 11735 3.233980 AGCCTGTGCGAGGTGTGA 61.234 61.111 3.67 0.00 44.97 3.58
7229 11794 5.696270 GGCGAAATGATTCCTGTTTTCTTTT 59.304 36.000 0.00 0.00 31.52 2.27
7282 11867 9.327628 GTCCCTTCTTCTTATAATACTGTTTCC 57.672 37.037 0.00 0.00 0.00 3.13
7283 11868 9.886132 TGTCCCTTCTTCTTATAATACTGTTTC 57.114 33.333 0.00 0.00 0.00 2.78
7292 11877 8.272173 CCCTACAATTGTCCCTTCTTCTTATAA 58.728 37.037 15.85 0.00 0.00 0.98
7295 11880 5.572885 GCCCTACAATTGTCCCTTCTTCTTA 60.573 44.000 15.85 0.00 0.00 2.10
7296 11881 4.811063 GCCCTACAATTGTCCCTTCTTCTT 60.811 45.833 15.85 0.00 0.00 2.52
7297 11882 3.308473 GCCCTACAATTGTCCCTTCTTCT 60.308 47.826 15.85 0.00 0.00 2.85
7298 11883 3.017442 GCCCTACAATTGTCCCTTCTTC 58.983 50.000 15.85 0.00 0.00 2.87
7299 11884 2.378547 TGCCCTACAATTGTCCCTTCTT 59.621 45.455 15.85 0.00 0.00 2.52
7300 11885 1.992557 TGCCCTACAATTGTCCCTTCT 59.007 47.619 15.85 0.00 0.00 2.85
7301 11886 2.369394 CTGCCCTACAATTGTCCCTTC 58.631 52.381 15.85 2.83 0.00 3.46
7302 11887 1.005924 CCTGCCCTACAATTGTCCCTT 59.994 52.381 15.85 0.00 0.00 3.95
7303 11888 0.625849 CCTGCCCTACAATTGTCCCT 59.374 55.000 15.85 0.00 0.00 4.20
7304 11889 0.623723 TCCTGCCCTACAATTGTCCC 59.376 55.000 15.85 2.74 0.00 4.46
7305 11890 2.507407 TTCCTGCCCTACAATTGTCC 57.493 50.000 15.85 3.10 0.00 4.02
7306 11891 5.405935 AATTTTCCTGCCCTACAATTGTC 57.594 39.130 15.85 0.75 0.00 3.18
7307 11892 5.823861 AAATTTTCCTGCCCTACAATTGT 57.176 34.783 16.68 16.68 0.00 2.71
7308 11893 8.614469 TTTTAAATTTTCCTGCCCTACAATTG 57.386 30.769 3.24 3.24 0.00 2.32
7309 11894 8.436778 ACTTTTAAATTTTCCTGCCCTACAATT 58.563 29.630 0.00 0.00 0.00 2.32
7310 11895 7.973402 ACTTTTAAATTTTCCTGCCCTACAAT 58.027 30.769 0.00 0.00 0.00 2.71
7311 11896 7.368198 ACTTTTAAATTTTCCTGCCCTACAA 57.632 32.000 0.00 0.00 0.00 2.41
7312 11897 6.987403 ACTTTTAAATTTTCCTGCCCTACA 57.013 33.333 0.00 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.