Multiple sequence alignment - TraesCS5A01G394400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G394400 chr5A 100.000 3663 0 0 1 3663 589578105 589581767 0.000000e+00 6765.0
1 TraesCS5A01G394400 chr5A 98.527 747 11 0 2917 3663 43498404 43497658 0.000000e+00 1319.0
2 TraesCS5A01G394400 chr5A 86.254 662 74 9 1 649 54731842 54732499 0.000000e+00 702.0
3 TraesCS5A01G394400 chr5A 83.579 542 77 7 1664 2200 589337426 589337960 7.060000e-137 497.0
4 TraesCS5A01G394400 chr5A 82.667 525 80 6 1668 2188 589372693 589373210 4.310000e-124 455.0
5 TraesCS5A01G394400 chr5A 82.308 520 56 10 995 1494 589315603 589316106 5.660000e-113 418.0
6 TraesCS5A01G394400 chr5A 85.965 342 41 5 2305 2644 589373275 589373611 3.480000e-95 359.0
7 TraesCS5A01G394400 chr5A 86.942 291 31 5 2305 2593 589338013 589338298 1.640000e-83 320.0
8 TraesCS5A01G394400 chr5A 82.849 344 57 2 2308 2650 589316348 589316690 1.280000e-79 307.0
9 TraesCS5A01G394400 chr5A 91.579 190 16 0 659 848 94093634 94093823 2.810000e-66 263.0
10 TraesCS5A01G394400 chr5B 92.065 1424 98 11 1505 2918 576257096 576258514 0.000000e+00 1989.0
11 TraesCS5A01G394400 chr5B 94.925 670 22 4 1 659 63252265 63251597 0.000000e+00 1038.0
12 TraesCS5A01G394400 chr5B 94.469 669 23 6 1 658 462905307 462905972 0.000000e+00 1018.0
13 TraesCS5A01G394400 chr5B 95.077 650 20 3 1 639 594230129 594229481 0.000000e+00 1013.0
14 TraesCS5A01G394400 chr5B 88.712 691 47 21 840 1517 576256389 576257061 0.000000e+00 815.0
15 TraesCS5A01G394400 chr5B 84.981 526 66 8 1668 2188 576245117 576245634 4.190000e-144 521.0
16 TraesCS5A01G394400 chr5B 82.445 638 65 15 2 627 246949559 246948957 7.010000e-142 514.0
17 TraesCS5A01G394400 chr5B 83.237 519 61 9 997 1494 576213456 576213969 1.550000e-123 453.0
18 TraesCS5A01G394400 chr5B 80.435 552 100 4 1638 2188 576223120 576223664 7.320000e-112 414.0
19 TraesCS5A01G394400 chr5B 81.532 509 79 11 1683 2188 576161361 576161857 4.400000e-109 405.0
20 TraesCS5A01G394400 chr5B 84.211 342 47 5 2305 2644 576245710 576246046 3.530000e-85 326.0
21 TraesCS5A01G394400 chr5B 78.293 539 71 25 993 1511 576242866 576243378 4.600000e-79 305.0
22 TraesCS5A01G394400 chr5B 78.969 485 60 12 997 1461 576221454 576221916 3.580000e-75 292.0
23 TraesCS5A01G394400 chr5B 93.011 186 13 0 662 847 67902100 67901915 4.660000e-69 272.0
24 TraesCS5A01G394400 chr5B 84.211 209 31 2 2312 2519 576055517 576055724 6.200000e-48 202.0
25 TraesCS5A01G394400 chr5B 76.966 356 76 6 2312 2664 576161943 576162295 8.020000e-47 198.0
26 TraesCS5A01G394400 chr5D 91.254 1372 92 12 1553 2918 469285202 469286551 0.000000e+00 1844.0
27 TraesCS5A01G394400 chr5D 92.374 577 25 10 941 1511 469284636 469285199 0.000000e+00 804.0
28 TraesCS5A01G394400 chr5D 84.981 526 66 8 1668 2188 469271655 469272172 4.190000e-144 521.0
29 TraesCS5A01G394400 chr5D 84.749 518 58 9 997 1494 469235387 469235903 1.960000e-137 499.0
30 TraesCS5A01G394400 chr5D 83.840 526 73 6 1666 2188 469236122 469236638 1.180000e-134 490.0
31 TraesCS5A01G394400 chr5D 79.065 535 66 22 993 1507 469269532 469270040 3.530000e-85 326.0
32 TraesCS5A01G394400 chr5D 79.264 516 65 14 997 1492 469241884 469242377 4.560000e-84 322.0
33 TraesCS5A01G394400 chr5D 83.526 346 51 5 2308 2650 469243330 469243672 5.900000e-83 318.0
34 TraesCS5A01G394400 chr5D 82.006 339 57 4 2308 2644 469236726 469237062 5.990000e-73 285.0
35 TraesCS5A01G394400 chr5D 91.935 186 15 0 659 844 126262765 126262950 1.010000e-65 261.0
36 TraesCS5A01G394400 chr5D 85.577 208 30 0 2312 2519 469245807 469246014 6.160000e-53 219.0
37 TraesCS5A01G394400 chr5D 74.044 497 87 27 1019 1494 469228494 469228969 8.140000e-37 165.0
38 TraesCS5A01G394400 chr5D 100.000 43 0 0 840 882 469284185 469284227 3.030000e-11 80.5
39 TraesCS5A01G394400 chr5D 97.674 43 0 1 2773 2814 111788637 111788679 5.070000e-09 73.1
40 TraesCS5A01G394400 chr6B 98.525 746 10 1 2918 3663 18869616 18870360 0.000000e+00 1315.0
41 TraesCS5A01G394400 chr7A 98.391 746 12 0 2918 3663 149286477 149285732 0.000000e+00 1312.0
42 TraesCS5A01G394400 chr7A 97.858 747 15 1 2917 3663 44741637 44742382 0.000000e+00 1290.0
43 TraesCS5A01G394400 chr7A 97.051 746 22 0 2918 3663 6951710 6950965 0.000000e+00 1256.0
44 TraesCS5A01G394400 chr6A 97.992 747 15 0 2917 3663 13967978 13968724 0.000000e+00 1297.0
45 TraesCS5A01G394400 chr6A 94.753 667 24 3 1 658 337216417 337217081 0.000000e+00 1027.0
46 TraesCS5A01G394400 chr6A 83.607 61 8 2 1032 1091 409796557 409796616 5.110000e-04 56.5
47 TraesCS5A01G394400 chr1A 97.597 749 16 2 2915 3663 380319066 380319812 0.000000e+00 1282.0
48 TraesCS5A01G394400 chr1A 97.718 745 16 1 2919 3663 521846365 521847108 0.000000e+00 1280.0
49 TraesCS5A01G394400 chr1A 91.005 189 17 0 662 850 482795829 482795641 4.690000e-64 255.0
50 TraesCS5A01G394400 chr1A 91.005 189 17 0 662 850 482800141 482799953 4.690000e-64 255.0
51 TraesCS5A01G394400 chr1A 83.893 149 22 2 2316 2463 29788588 29788735 1.370000e-29 141.0
52 TraesCS5A01G394400 chr3B 97.590 747 18 0 2917 3663 41154842 41154096 0.000000e+00 1280.0
53 TraesCS5A01G394400 chr3B 91.690 710 41 5 1 697 466633809 466634513 0.000000e+00 968.0
54 TraesCS5A01G394400 chr3B 87.481 655 69 12 1 649 14711653 14712300 0.000000e+00 743.0
55 TraesCS5A01G394400 chr3A 94.963 675 19 7 1 664 522043545 522044215 0.000000e+00 1044.0
56 TraesCS5A01G394400 chr3A 94.256 679 29 6 1 669 378337650 378336972 0.000000e+00 1029.0
57 TraesCS5A01G394400 chr3A 90.741 54 4 1 2780 2832 584446825 584446772 1.820000e-08 71.3
58 TraesCS5A01G394400 chr1B 94.109 679 26 4 1 667 614505943 614506619 0.000000e+00 1020.0
59 TraesCS5A01G394400 chr1B 94.003 667 27 8 1 659 614584459 614583798 0.000000e+00 998.0
60 TraesCS5A01G394400 chr1B 91.979 187 14 1 662 847 653281779 653281965 1.010000e-65 261.0
61 TraesCS5A01G394400 chr7B 93.953 678 29 4 1 667 678974337 678975013 0.000000e+00 1014.0
62 TraesCS5A01G394400 chr7B 82.341 504 59 18 997 1494 120792100 120791621 9.470000e-111 411.0
63 TraesCS5A01G394400 chr7B 91.848 184 14 1 662 845 741362227 741362045 4.690000e-64 255.0
64 TraesCS5A01G394400 chr2B 95.069 649 20 3 1 639 122923479 122924125 0.000000e+00 1011.0
65 TraesCS5A01G394400 chr2A 93.363 678 30 5 1 668 157450812 157450140 0.000000e+00 989.0
66 TraesCS5A01G394400 chr2A 79.063 683 120 18 1 675 151251094 151250427 7.220000e-122 448.0
67 TraesCS5A01G394400 chr1D 81.548 672 81 28 2 665 11761902 11761266 7.010000e-142 514.0
68 TraesCS5A01G394400 chr1D 92.442 172 13 0 662 833 418715141 418715312 2.830000e-61 246.0
69 TraesCS5A01G394400 chr1D 90.000 190 18 1 662 850 353130452 353130263 1.020000e-60 244.0
70 TraesCS5A01G394400 chr1D 84.397 141 20 2 2316 2455 28565965 28566104 1.770000e-28 137.0
71 TraesCS5A01G394400 chr4A 86.393 463 54 7 1 458 111086237 111086695 7.060000e-137 497.0
72 TraesCS5A01G394400 chr4A 92.432 185 14 0 662 846 111436185 111436369 7.800000e-67 265.0
73 TraesCS5A01G394400 chr4A 92.896 183 12 1 662 844 159363539 159363720 7.800000e-67 265.0
74 TraesCS5A01G394400 chr4A 92.432 185 14 0 662 846 683963607 683963423 7.800000e-67 265.0
75 TraesCS5A01G394400 chr7D 81.462 561 87 9 1632 2188 160014975 160014428 9.330000e-121 444.0
76 TraesCS5A01G394400 chr7D 83.004 506 52 22 997 1494 160015642 160015163 9.400000e-116 427.0
77 TraesCS5A01G394400 chr7D 92.513 187 13 1 659 845 326788382 326788567 2.170000e-67 267.0
78 TraesCS5A01G394400 chr6D 92.973 185 12 1 662 846 26354160 26353977 6.030000e-68 268.0
79 TraesCS5A01G394400 chr6D 90.722 194 16 2 662 855 926231 926040 1.310000e-64 257.0
80 TraesCS5A01G394400 chr6D 91.848 184 14 1 662 845 388990701 388990883 4.690000e-64 255.0
81 TraesCS5A01G394400 chr6D 92.614 176 13 0 662 837 80113677 80113852 1.690000e-63 254.0
82 TraesCS5A01G394400 chr6D 90.811 185 17 0 662 846 454127208 454127024 7.850000e-62 248.0
83 TraesCS5A01G394400 chr6D 90.659 182 17 0 662 843 293858679 293858498 3.650000e-60 243.0
84 TraesCS5A01G394400 chr6D 91.329 173 15 0 665 837 106456999 106457171 1.700000e-58 237.0
85 TraesCS5A01G394400 chr6D 85.714 63 5 4 2779 2837 242634287 242634225 3.050000e-06 63.9
86 TraesCS5A01G394400 chr6D 83.607 61 8 2 1032 1091 305075719 305075660 5.110000e-04 56.5
87 TraesCS5A01G394400 chr3D 92.473 186 14 0 660 845 586579012 586579197 2.170000e-67 267.0
88 TraesCS5A01G394400 chr3D 89.950 199 18 2 659 855 282527718 282527520 4.690000e-64 255.0
89 TraesCS5A01G394400 chr3D 83.916 143 23 0 1943 2085 22291444 22291302 1.770000e-28 137.0
90 TraesCS5A01G394400 chr3D 89.231 65 7 0 2314 2378 75963202 75963266 8.430000e-12 82.4
91 TraesCS5A01G394400 chr3D 90.196 51 3 2 2765 2814 507962497 507962448 8.490000e-07 65.8
92 TraesCS5A01G394400 chr3D 81.818 77 7 7 2780 2853 386297048 386297120 1.420000e-04 58.4
93 TraesCS5A01G394400 chrUn 91.579 190 15 1 662 850 108799316 108799505 1.010000e-65 261.0
94 TraesCS5A01G394400 chrUn 90.957 188 15 2 662 849 68758158 68758343 6.070000e-63 252.0
95 TraesCS5A01G394400 chrUn 90.909 176 14 2 662 837 460548469 460548642 6.120000e-58 235.0
96 TraesCS5A01G394400 chrUn 90.361 166 16 0 663 828 74554872 74555037 6.160000e-53 219.0
97 TraesCS5A01G394400 chrUn 94.937 79 4 0 662 740 460548332 460548410 1.380000e-24 124.0
98 TraesCS5A01G394400 chr4B 92.308 182 14 0 662 843 529704324 529704143 3.630000e-65 259.0
99 TraesCS5A01G394400 chr4B 88.889 54 3 3 2780 2831 12057753 12057805 3.050000e-06 63.9
100 TraesCS5A01G394400 chr4D 90.625 192 18 0 659 850 493132093 493131902 4.690000e-64 255.0
101 TraesCS5A01G394400 chr4D 89.091 55 1 5 2780 2833 134127022 134127072 3.050000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G394400 chr5A 589578105 589581767 3662 False 6765.000000 6765 100.000000 1 3663 1 chr5A.!!$F3 3662
1 TraesCS5A01G394400 chr5A 43497658 43498404 746 True 1319.000000 1319 98.527000 2917 3663 1 chr5A.!!$R1 746
2 TraesCS5A01G394400 chr5A 54731842 54732499 657 False 702.000000 702 86.254000 1 649 1 chr5A.!!$F1 648
3 TraesCS5A01G394400 chr5A 589337426 589338298 872 False 408.500000 497 85.260500 1664 2593 2 chr5A.!!$F5 929
4 TraesCS5A01G394400 chr5A 589372693 589373611 918 False 407.000000 455 84.316000 1668 2644 2 chr5A.!!$F6 976
5 TraesCS5A01G394400 chr5A 589315603 589316690 1087 False 362.500000 418 82.578500 995 2650 2 chr5A.!!$F4 1655
6 TraesCS5A01G394400 chr5B 576256389 576258514 2125 False 1402.000000 1989 90.388500 840 2918 2 chr5B.!!$F7 2078
7 TraesCS5A01G394400 chr5B 63251597 63252265 668 True 1038.000000 1038 94.925000 1 659 1 chr5B.!!$R1 658
8 TraesCS5A01G394400 chr5B 462905307 462905972 665 False 1018.000000 1018 94.469000 1 658 1 chr5B.!!$F1 657
9 TraesCS5A01G394400 chr5B 594229481 594230129 648 True 1013.000000 1013 95.077000 1 639 1 chr5B.!!$R4 638
10 TraesCS5A01G394400 chr5B 246948957 246949559 602 True 514.000000 514 82.445000 2 627 1 chr5B.!!$R3 625
11 TraesCS5A01G394400 chr5B 576213456 576213969 513 False 453.000000 453 83.237000 997 1494 1 chr5B.!!$F3 497
12 TraesCS5A01G394400 chr5B 576242866 576246046 3180 False 384.000000 521 82.495000 993 2644 3 chr5B.!!$F6 1651
13 TraesCS5A01G394400 chr5B 576221454 576223664 2210 False 353.000000 414 79.702000 997 2188 2 chr5B.!!$F5 1191
14 TraesCS5A01G394400 chr5B 576161361 576162295 934 False 301.500000 405 79.249000 1683 2664 2 chr5B.!!$F4 981
15 TraesCS5A01G394400 chr5D 469284185 469286551 2366 False 909.500000 1844 94.542667 840 2918 3 chr5D.!!$F7 2078
16 TraesCS5A01G394400 chr5D 469235387 469237062 1675 False 424.666667 499 83.531667 997 2644 3 chr5D.!!$F4 1647
17 TraesCS5A01G394400 chr5D 469269532 469272172 2640 False 423.500000 521 82.023000 993 2188 2 chr5D.!!$F6 1195
18 TraesCS5A01G394400 chr5D 469241884 469246014 4130 False 286.333333 322 82.789000 997 2650 3 chr5D.!!$F5 1653
19 TraesCS5A01G394400 chr6B 18869616 18870360 744 False 1315.000000 1315 98.525000 2918 3663 1 chr6B.!!$F1 745
20 TraesCS5A01G394400 chr7A 149285732 149286477 745 True 1312.000000 1312 98.391000 2918 3663 1 chr7A.!!$R2 745
21 TraesCS5A01G394400 chr7A 44741637 44742382 745 False 1290.000000 1290 97.858000 2917 3663 1 chr7A.!!$F1 746
22 TraesCS5A01G394400 chr7A 6950965 6951710 745 True 1256.000000 1256 97.051000 2918 3663 1 chr7A.!!$R1 745
23 TraesCS5A01G394400 chr6A 13967978 13968724 746 False 1297.000000 1297 97.992000 2917 3663 1 chr6A.!!$F1 746
24 TraesCS5A01G394400 chr6A 337216417 337217081 664 False 1027.000000 1027 94.753000 1 658 1 chr6A.!!$F2 657
25 TraesCS5A01G394400 chr1A 380319066 380319812 746 False 1282.000000 1282 97.597000 2915 3663 1 chr1A.!!$F2 748
26 TraesCS5A01G394400 chr1A 521846365 521847108 743 False 1280.000000 1280 97.718000 2919 3663 1 chr1A.!!$F3 744
27 TraesCS5A01G394400 chr3B 41154096 41154842 746 True 1280.000000 1280 97.590000 2917 3663 1 chr3B.!!$R1 746
28 TraesCS5A01G394400 chr3B 466633809 466634513 704 False 968.000000 968 91.690000 1 697 1 chr3B.!!$F2 696
29 TraesCS5A01G394400 chr3B 14711653 14712300 647 False 743.000000 743 87.481000 1 649 1 chr3B.!!$F1 648
30 TraesCS5A01G394400 chr3A 522043545 522044215 670 False 1044.000000 1044 94.963000 1 664 1 chr3A.!!$F1 663
31 TraesCS5A01G394400 chr3A 378336972 378337650 678 True 1029.000000 1029 94.256000 1 669 1 chr3A.!!$R1 668
32 TraesCS5A01G394400 chr1B 614505943 614506619 676 False 1020.000000 1020 94.109000 1 667 1 chr1B.!!$F1 666
33 TraesCS5A01G394400 chr1B 614583798 614584459 661 True 998.000000 998 94.003000 1 659 1 chr1B.!!$R1 658
34 TraesCS5A01G394400 chr7B 678974337 678975013 676 False 1014.000000 1014 93.953000 1 667 1 chr7B.!!$F1 666
35 TraesCS5A01G394400 chr2B 122923479 122924125 646 False 1011.000000 1011 95.069000 1 639 1 chr2B.!!$F1 638
36 TraesCS5A01G394400 chr2A 157450140 157450812 672 True 989.000000 989 93.363000 1 668 1 chr2A.!!$R2 667
37 TraesCS5A01G394400 chr2A 151250427 151251094 667 True 448.000000 448 79.063000 1 675 1 chr2A.!!$R1 674
38 TraesCS5A01G394400 chr1D 11761266 11761902 636 True 514.000000 514 81.548000 2 665 1 chr1D.!!$R1 663
39 TraesCS5A01G394400 chr7D 160014428 160015642 1214 True 435.500000 444 82.233000 997 2188 2 chr7D.!!$R1 1191

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
933 982 0.103208 ATTGTGATCTCGACGCTCCC 59.897 55.0 0.0 0.0 0.0 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2684 8385 0.179171 AATCGTAGCGACCGTCACAG 60.179 55.0 0.0 0.0 39.18 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 5.067936 TGAGATCTTCGAAACTAGATCCCAC 59.932 44.000 17.33 11.62 45.05 4.61
64 65 4.640201 AGATCCCACGTTGATATGTTTTGG 59.360 41.667 0.00 0.00 0.00 3.28
67 68 3.504134 CCCACGTTGATATGTTTTGGTGA 59.496 43.478 0.00 0.00 0.00 4.02
129 142 7.601130 GCATATGAATTGCCATGATGTTTACAT 59.399 33.333 6.97 0.00 35.17 2.29
202 217 9.961266 GTAAATTTTGACATTTATAAAACGGGC 57.039 29.630 1.21 0.00 32.49 6.13
427 447 0.396435 ACATCGTGGCAACTTCTGGA 59.604 50.000 0.00 0.00 37.61 3.86
456 495 7.429636 AAAAATTCGTCGAAACAGGATCTAA 57.570 32.000 12.40 0.00 0.00 2.10
794 838 8.840833 AAACTTGGTCAAATTTTGTGTAGTTT 57.159 26.923 17.83 17.83 31.43 2.66
795 839 7.826260 ACTTGGTCAAATTTTGTGTAGTTTG 57.174 32.000 8.89 0.00 33.91 2.93
796 840 7.607250 ACTTGGTCAAATTTTGTGTAGTTTGA 58.393 30.769 8.89 0.00 38.01 2.69
797 841 8.257306 ACTTGGTCAAATTTTGTGTAGTTTGAT 58.743 29.630 8.89 0.00 41.11 2.57
798 842 9.097257 CTTGGTCAAATTTTGTGTAGTTTGATT 57.903 29.630 8.89 0.00 41.11 2.57
799 843 9.442047 TTGGTCAAATTTTGTGTAGTTTGATTT 57.558 25.926 8.89 0.00 41.11 2.17
800 844 9.442047 TGGTCAAATTTTGTGTAGTTTGATTTT 57.558 25.926 8.89 0.00 41.11 1.82
801 845 9.701355 GGTCAAATTTTGTGTAGTTTGATTTTG 57.299 29.630 8.89 0.00 41.11 2.44
819 863 7.766723 GATTTTGATCAAATCTTATACGCGG 57.233 36.000 21.10 0.00 45.30 6.46
820 864 6.912203 TTTTGATCAAATCTTATACGCGGA 57.088 33.333 21.10 0.00 0.00 5.54
821 865 6.525121 TTTGATCAAATCTTATACGCGGAG 57.475 37.500 16.91 2.64 0.00 4.63
822 866 5.196341 TGATCAAATCTTATACGCGGAGT 57.804 39.130 12.47 0.00 0.00 3.85
823 867 6.321848 TGATCAAATCTTATACGCGGAGTA 57.678 37.500 12.47 0.00 40.03 2.59
824 868 6.741109 TGATCAAATCTTATACGCGGAGTAA 58.259 36.000 12.47 5.50 39.04 2.24
825 869 7.204604 TGATCAAATCTTATACGCGGAGTAAA 58.795 34.615 12.47 0.00 39.04 2.01
826 870 7.707464 TGATCAAATCTTATACGCGGAGTAAAA 59.293 33.333 12.47 0.00 39.04 1.52
827 871 7.830940 TCAAATCTTATACGCGGAGTAAAAA 57.169 32.000 12.47 0.00 39.04 1.94
828 872 7.902032 TCAAATCTTATACGCGGAGTAAAAAG 58.098 34.615 12.47 2.41 39.04 2.27
829 873 7.760794 TCAAATCTTATACGCGGAGTAAAAAGA 59.239 33.333 12.47 16.46 41.47 2.52
830 874 8.385111 CAAATCTTATACGCGGAGTAAAAAGAA 58.615 33.333 12.47 7.47 41.03 2.52
831 875 8.483307 AATCTTATACGCGGAGTAAAAAGAAA 57.517 30.769 12.47 4.05 41.03 2.52
832 876 7.281991 TCTTATACGCGGAGTAAAAAGAAAC 57.718 36.000 12.47 0.00 37.91 2.78
833 877 2.936050 ACGCGGAGTAAAAAGAAACG 57.064 45.000 12.47 0.00 0.00 3.60
834 878 1.528161 ACGCGGAGTAAAAAGAAACGG 59.472 47.619 12.47 0.00 0.00 4.44
835 879 1.794116 CGCGGAGTAAAAAGAAACGGA 59.206 47.619 0.00 0.00 0.00 4.69
836 880 2.159881 CGCGGAGTAAAAAGAAACGGAG 60.160 50.000 0.00 0.00 0.00 4.63
837 881 2.412455 GCGGAGTAAAAAGAAACGGAGC 60.412 50.000 0.00 0.00 0.00 4.70
838 882 2.803956 CGGAGTAAAAAGAAACGGAGCA 59.196 45.455 0.00 0.00 0.00 4.26
882 927 2.558378 CAATCATCAGCCGACATCTGT 58.442 47.619 0.00 0.00 33.48 3.41
883 928 2.522836 ATCATCAGCCGACATCTGTC 57.477 50.000 0.07 0.07 41.47 3.51
884 929 1.478631 TCATCAGCCGACATCTGTCT 58.521 50.000 8.57 0.00 42.66 3.41
885 930 1.406898 TCATCAGCCGACATCTGTCTC 59.593 52.381 8.57 1.05 42.66 3.36
886 931 1.135721 CATCAGCCGACATCTGTCTCA 59.864 52.381 8.57 0.00 42.66 3.27
887 932 1.256812 TCAGCCGACATCTGTCTCAA 58.743 50.000 8.57 0.00 42.66 3.02
888 933 1.203287 TCAGCCGACATCTGTCTCAAG 59.797 52.381 8.57 0.00 42.66 3.02
889 934 0.108424 AGCCGACATCTGTCTCAAGC 60.108 55.000 8.57 6.20 42.66 4.01
890 935 0.390340 GCCGACATCTGTCTCAAGCA 60.390 55.000 8.57 0.00 42.66 3.91
891 936 1.741732 GCCGACATCTGTCTCAAGCAT 60.742 52.381 8.57 0.00 42.66 3.79
892 937 2.200067 CCGACATCTGTCTCAAGCATC 58.800 52.381 8.57 0.00 42.66 3.91
893 938 2.159128 CCGACATCTGTCTCAAGCATCT 60.159 50.000 8.57 0.00 42.66 2.90
894 939 2.858941 CGACATCTGTCTCAAGCATCTG 59.141 50.000 8.57 0.00 42.66 2.90
895 940 3.428589 CGACATCTGTCTCAAGCATCTGA 60.429 47.826 8.57 0.00 42.66 3.27
896 941 4.502016 GACATCTGTCTCAAGCATCTGAA 58.498 43.478 3.07 0.00 41.65 3.02
897 942 4.252073 ACATCTGTCTCAAGCATCTGAAC 58.748 43.478 0.00 0.00 0.00 3.18
898 943 4.020396 ACATCTGTCTCAAGCATCTGAACT 60.020 41.667 0.00 0.00 0.00 3.01
899 944 3.922910 TCTGTCTCAAGCATCTGAACTG 58.077 45.455 0.00 0.00 0.00 3.16
900 945 3.575687 TCTGTCTCAAGCATCTGAACTGA 59.424 43.478 0.00 0.00 0.00 3.41
901 946 3.922910 TGTCTCAAGCATCTGAACTGAG 58.077 45.455 0.00 0.00 0.00 3.35
902 947 3.323115 TGTCTCAAGCATCTGAACTGAGT 59.677 43.478 0.00 0.00 0.00 3.41
930 979 0.733150 TCGATTGTGATCTCGACGCT 59.267 50.000 1.03 0.00 38.86 5.07
931 980 1.116436 CGATTGTGATCTCGACGCTC 58.884 55.000 0.00 0.00 37.05 5.03
932 981 1.482278 GATTGTGATCTCGACGCTCC 58.518 55.000 0.00 0.00 0.00 4.70
933 982 0.103208 ATTGTGATCTCGACGCTCCC 59.897 55.000 0.00 0.00 0.00 4.30
934 983 1.945354 TTGTGATCTCGACGCTCCCC 61.945 60.000 0.00 0.00 0.00 4.81
935 984 2.044352 TGATCTCGACGCTCCCCA 60.044 61.111 0.00 0.00 0.00 4.96
936 985 2.413765 GATCTCGACGCTCCCCAC 59.586 66.667 0.00 0.00 0.00 4.61
953 1366 1.594293 ACTTCGACCGCCACACAAG 60.594 57.895 0.00 0.00 0.00 3.16
991 1404 0.389948 GGACGCGATATCCATCCCAC 60.390 60.000 15.93 0.00 36.15 4.61
1125 1544 2.022129 CACCTTCGTCTGCACCGAC 61.022 63.158 3.35 0.00 33.41 4.79
1159 1578 1.172180 CCTTCTTGACGCCCTGCAAA 61.172 55.000 0.00 0.00 0.00 3.68
1161 1580 1.795170 TTCTTGACGCCCTGCAAAGC 61.795 55.000 0.00 0.00 0.00 3.51
1162 1581 2.518112 TTGACGCCCTGCAAAGCA 60.518 55.556 8.23 0.00 36.92 3.91
1314 1745 0.179089 CAGGCTATGTCGAGCAGCTT 60.179 55.000 0.00 2.91 44.76 3.74
1587 4622 4.460382 TCTGAACAGAGGATTGCCATTTTC 59.540 41.667 0.00 0.00 36.29 2.29
1588 4623 4.410099 TGAACAGAGGATTGCCATTTTCT 58.590 39.130 0.00 0.00 36.29 2.52
1592 4627 4.461781 ACAGAGGATTGCCATTTTCTTCTG 59.538 41.667 9.02 9.02 44.58 3.02
1593 4628 4.021916 AGAGGATTGCCATTTTCTTCTGG 58.978 43.478 0.00 0.00 36.29 3.86
1711 4800 2.433491 TACACGTCGCACATGCCC 60.433 61.111 0.00 0.00 37.91 5.36
1919 5011 2.742372 CCGTCGGGCAGTTCTTGG 60.742 66.667 2.34 0.00 0.00 3.61
2129 5224 1.659335 TGGTTCGACGAGTTCACGC 60.659 57.895 0.00 0.00 36.70 5.34
2158 5259 3.134127 GTCAACGGCAGGGGCATC 61.134 66.667 0.00 0.00 43.71 3.91
2221 5333 5.584253 TCATCAACTTACCTAGCTCTCAC 57.416 43.478 0.00 0.00 0.00 3.51
2235 5347 4.045104 AGCTCTCACGCTATGTTTAATCG 58.955 43.478 0.00 0.00 38.76 3.34
2259 5371 0.035630 GCCTCAGACCTCAGTGCATT 60.036 55.000 0.00 0.00 0.00 3.56
2280 5403 3.291809 TTGTAAGCGTCAGATCGTGAA 57.708 42.857 0.00 0.00 36.74 3.18
2284 5407 2.086426 GCGTCAGATCGTGAACGCA 61.086 57.895 22.92 0.00 46.27 5.24
2296 5419 6.748198 AGATCGTGAACGCAAACTTTTTAAAA 59.252 30.769 0.00 0.00 39.60 1.52
2505 8202 1.404181 CGGTGAAGATGGTGTCGTGAT 60.404 52.381 0.00 0.00 0.00 3.06
2606 8303 2.048222 CTCGCAAGTGCCTCGGAA 60.048 61.111 0.00 0.00 37.91 4.30
2632 8329 3.134458 GGGCTCCTCGTATGAGAATTTG 58.866 50.000 13.79 0.00 45.57 2.32
2644 8341 8.659491 TCGTATGAGAATTTGAAGAGATTTGTG 58.341 33.333 0.00 0.00 0.00 3.33
2667 8364 1.762957 TCTTCTAAGCGAATGAGGGGG 59.237 52.381 0.00 0.00 0.00 5.40
2668 8365 0.180406 TTCTAAGCGAATGAGGGGGC 59.820 55.000 0.00 0.00 0.00 5.80
2669 8366 0.980754 TCTAAGCGAATGAGGGGGCA 60.981 55.000 0.00 0.00 0.00 5.36
2670 8367 0.815615 CTAAGCGAATGAGGGGGCAC 60.816 60.000 0.00 0.00 0.00 5.01
2676 8377 1.067635 CGAATGAGGGGGCACTTTTTG 60.068 52.381 0.00 0.00 0.00 2.44
2690 8391 4.787598 CACTTTTTGCTACATCCTGTGAC 58.212 43.478 0.00 0.00 0.00 3.67
2703 8404 0.179171 CTGTGACGGTCGCTACGATT 60.179 55.000 21.05 0.00 38.42 3.34
2769 8474 8.549338 AAGGAGTGTAGTTAATTTAGAGTTGC 57.451 34.615 0.00 0.00 0.00 4.17
2814 8520 8.784043 GTCCCATAATATAAGAGCGTTTTTGAT 58.216 33.333 0.00 0.00 0.00 2.57
2874 8580 6.184580 TCACTCGTTGTATGTTGTTTTTGT 57.815 33.333 0.00 0.00 0.00 2.83
2899 8609 7.169140 GTCAAAAAGTTGTGTAATCATTGGACC 59.831 37.037 0.00 0.00 36.07 4.46
2909 8619 3.769739 ATCATTGGACCGCATAGCTAA 57.230 42.857 0.00 0.00 0.00 3.09
2971 8681 6.597562 TGACATTTTTGACACTACTTACCCT 58.402 36.000 0.00 0.00 0.00 4.34
3155 8865 1.077625 AGTCCTCACGGCTTCTCCT 59.922 57.895 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
129 142 6.587206 TGAAACATATCATGGCAACTTCAA 57.413 33.333 0.00 0.00 37.61 2.69
202 217 8.044060 TCATGGCAAGTCTAGTTTCTTAATTG 57.956 34.615 0.00 0.00 0.00 2.32
639 683 3.907894 AACGGAAATGTTAACGCACAT 57.092 38.095 0.26 0.00 39.17 3.21
768 812 9.930693 AAACTACACAAAATTTGACCAAGTTTA 57.069 25.926 13.19 0.00 34.53 2.01
769 813 8.716909 CAAACTACACAAAATTTGACCAAGTTT 58.283 29.630 13.19 16.32 35.50 2.66
770 814 8.091449 TCAAACTACACAAAATTTGACCAAGTT 58.909 29.630 13.19 12.11 36.42 2.66
771 815 7.607250 TCAAACTACACAAAATTTGACCAAGT 58.393 30.769 13.19 7.22 36.42 3.16
772 816 8.647143 ATCAAACTACACAAAATTTGACCAAG 57.353 30.769 13.19 6.64 42.22 3.61
773 817 9.442047 AAATCAAACTACACAAAATTTGACCAA 57.558 25.926 13.19 0.00 42.22 3.67
774 818 9.442047 AAAATCAAACTACACAAAATTTGACCA 57.558 25.926 13.19 0.00 42.22 4.02
775 819 9.701355 CAAAATCAAACTACACAAAATTTGACC 57.299 29.630 13.19 0.00 42.22 4.02
796 840 7.226720 ACTCCGCGTATAAGATTTGATCAAAAT 59.773 33.333 23.91 15.07 41.33 1.82
797 841 6.537301 ACTCCGCGTATAAGATTTGATCAAAA 59.463 34.615 23.91 8.76 33.56 2.44
798 842 6.046593 ACTCCGCGTATAAGATTTGATCAAA 58.953 36.000 22.52 22.52 34.46 2.69
799 843 5.597806 ACTCCGCGTATAAGATTTGATCAA 58.402 37.500 3.38 3.38 0.00 2.57
800 844 5.196341 ACTCCGCGTATAAGATTTGATCA 57.804 39.130 4.92 0.00 0.00 2.92
801 845 7.633361 TTTACTCCGCGTATAAGATTTGATC 57.367 36.000 4.92 0.00 0.00 2.92
802 846 8.428186 TTTTTACTCCGCGTATAAGATTTGAT 57.572 30.769 4.92 0.00 0.00 2.57
803 847 7.760794 TCTTTTTACTCCGCGTATAAGATTTGA 59.239 33.333 4.92 0.00 30.53 2.69
804 848 7.902032 TCTTTTTACTCCGCGTATAAGATTTG 58.098 34.615 4.92 0.00 30.53 2.32
805 849 8.483307 TTCTTTTTACTCCGCGTATAAGATTT 57.517 30.769 4.92 0.00 33.18 2.17
806 850 8.385858 GTTTCTTTTTACTCCGCGTATAAGATT 58.614 33.333 4.92 0.00 33.18 2.40
807 851 7.253883 CGTTTCTTTTTACTCCGCGTATAAGAT 60.254 37.037 4.92 0.00 33.18 2.40
808 852 6.033831 CGTTTCTTTTTACTCCGCGTATAAGA 59.966 38.462 4.92 1.37 32.15 2.10
809 853 6.173724 CGTTTCTTTTTACTCCGCGTATAAG 58.826 40.000 4.92 0.00 0.00 1.73
810 854 5.062058 CCGTTTCTTTTTACTCCGCGTATAA 59.938 40.000 4.92 0.00 0.00 0.98
811 855 4.562394 CCGTTTCTTTTTACTCCGCGTATA 59.438 41.667 4.92 0.00 0.00 1.47
812 856 3.368843 CCGTTTCTTTTTACTCCGCGTAT 59.631 43.478 4.92 0.00 0.00 3.06
813 857 2.730928 CCGTTTCTTTTTACTCCGCGTA 59.269 45.455 4.92 0.00 0.00 4.42
814 858 1.528161 CCGTTTCTTTTTACTCCGCGT 59.472 47.619 4.92 0.00 0.00 6.01
815 859 1.794116 TCCGTTTCTTTTTACTCCGCG 59.206 47.619 0.00 0.00 0.00 6.46
816 860 2.412455 GCTCCGTTTCTTTTTACTCCGC 60.412 50.000 0.00 0.00 0.00 5.54
817 861 2.803956 TGCTCCGTTTCTTTTTACTCCG 59.196 45.455 0.00 0.00 0.00 4.63
818 862 4.275196 ACTTGCTCCGTTTCTTTTTACTCC 59.725 41.667 0.00 0.00 0.00 3.85
819 863 5.419760 ACTTGCTCCGTTTCTTTTTACTC 57.580 39.130 0.00 0.00 0.00 2.59
820 864 6.053650 AGTACTTGCTCCGTTTCTTTTTACT 58.946 36.000 0.00 0.00 0.00 2.24
821 865 6.296365 AGTACTTGCTCCGTTTCTTTTTAC 57.704 37.500 0.00 0.00 0.00 2.01
822 866 6.647895 CCTAGTACTTGCTCCGTTTCTTTTTA 59.352 38.462 0.00 0.00 0.00 1.52
823 867 5.469084 CCTAGTACTTGCTCCGTTTCTTTTT 59.531 40.000 0.00 0.00 0.00 1.94
824 868 4.995487 CCTAGTACTTGCTCCGTTTCTTTT 59.005 41.667 0.00 0.00 0.00 2.27
825 869 4.282703 TCCTAGTACTTGCTCCGTTTCTTT 59.717 41.667 0.00 0.00 0.00 2.52
826 870 3.830755 TCCTAGTACTTGCTCCGTTTCTT 59.169 43.478 0.00 0.00 0.00 2.52
827 871 3.428532 TCCTAGTACTTGCTCCGTTTCT 58.571 45.455 0.00 0.00 0.00 2.52
828 872 3.863142 TCCTAGTACTTGCTCCGTTTC 57.137 47.619 0.00 0.00 0.00 2.78
829 873 4.820894 ATTCCTAGTACTTGCTCCGTTT 57.179 40.909 0.00 0.00 0.00 3.60
830 874 5.186409 TGTTATTCCTAGTACTTGCTCCGTT 59.814 40.000 0.00 0.00 0.00 4.44
831 875 4.708421 TGTTATTCCTAGTACTTGCTCCGT 59.292 41.667 0.00 0.00 0.00 4.69
832 876 5.041940 GTGTTATTCCTAGTACTTGCTCCG 58.958 45.833 0.00 0.00 0.00 4.63
833 877 5.105064 TGGTGTTATTCCTAGTACTTGCTCC 60.105 44.000 0.00 0.00 0.00 4.70
834 878 5.974108 TGGTGTTATTCCTAGTACTTGCTC 58.026 41.667 0.00 0.00 0.00 4.26
835 879 6.384305 AGATGGTGTTATTCCTAGTACTTGCT 59.616 38.462 0.00 0.00 0.00 3.91
836 880 6.583562 AGATGGTGTTATTCCTAGTACTTGC 58.416 40.000 0.00 0.00 0.00 4.01
837 881 7.147724 TGGAGATGGTGTTATTCCTAGTACTTG 60.148 40.741 0.00 0.00 0.00 3.16
838 882 6.901300 TGGAGATGGTGTTATTCCTAGTACTT 59.099 38.462 0.00 0.00 0.00 2.24
882 927 4.282957 AGAACTCAGTTCAGATGCTTGAGA 59.717 41.667 19.89 0.00 44.11 3.27
883 928 4.567971 AGAACTCAGTTCAGATGCTTGAG 58.432 43.478 19.89 0.00 44.11 3.02
884 929 4.282957 AGAGAACTCAGTTCAGATGCTTGA 59.717 41.667 19.89 0.00 44.11 3.02
885 930 4.567971 AGAGAACTCAGTTCAGATGCTTG 58.432 43.478 19.89 0.00 44.11 4.01
886 931 4.527816 AGAGAGAACTCAGTTCAGATGCTT 59.472 41.667 19.89 0.00 44.11 3.91
887 932 4.088634 AGAGAGAACTCAGTTCAGATGCT 58.911 43.478 19.89 8.20 44.11 3.79
888 933 4.158394 AGAGAGAGAACTCAGTTCAGATGC 59.842 45.833 19.89 6.04 44.11 3.91
889 934 5.447683 CGAGAGAGAGAACTCAGTTCAGATG 60.448 48.000 19.89 0.00 44.11 2.90
890 935 4.635765 CGAGAGAGAGAACTCAGTTCAGAT 59.364 45.833 19.89 4.66 44.11 2.90
891 936 4.000325 CGAGAGAGAGAACTCAGTTCAGA 59.000 47.826 19.89 0.00 44.11 3.27
892 937 4.000325 TCGAGAGAGAGAACTCAGTTCAG 59.000 47.826 19.89 1.10 44.79 3.02
893 938 4.009370 TCGAGAGAGAGAACTCAGTTCA 57.991 45.455 19.89 0.00 44.79 3.18
932 981 4.308458 TGTGGCGGTCGAAGTGGG 62.308 66.667 0.00 0.00 0.00 4.61
933 982 3.041940 GTGTGGCGGTCGAAGTGG 61.042 66.667 0.00 0.00 0.00 4.00
934 983 1.831389 CTTGTGTGGCGGTCGAAGTG 61.831 60.000 0.00 0.00 0.00 3.16
935 984 1.594293 CTTGTGTGGCGGTCGAAGT 60.594 57.895 0.00 0.00 0.00 3.01
936 985 1.284982 CTCTTGTGTGGCGGTCGAAG 61.285 60.000 0.00 0.00 0.00 3.79
953 1366 2.257067 GAGCCTCGCGGATAGCTC 59.743 66.667 19.29 19.29 44.36 4.09
980 1393 1.835267 CCGGTCGGTGGGATGGATA 60.835 63.158 0.55 0.00 0.00 2.59
1125 1544 0.394899 GAAGGAGCTTGTGGATGGGG 60.395 60.000 0.00 0.00 0.00 4.96
1314 1745 1.204146 GCACCTTGGTCTCCCTGATA 58.796 55.000 0.00 0.00 0.00 2.15
1360 1827 1.302033 CAACCTCGAAGCACAGCCT 60.302 57.895 0.00 0.00 0.00 4.58
1534 2901 6.721321 AGGTGTGTTAACAAAACAGTAATCG 58.279 36.000 16.18 0.00 38.27 3.34
1588 4623 2.301296 CCAGTGCTTCTTCTCTCCAGAA 59.699 50.000 0.00 0.00 37.11 3.02
1592 4627 1.899142 AGTCCAGTGCTTCTTCTCTCC 59.101 52.381 0.00 0.00 0.00 3.71
1593 4628 2.560542 TCAGTCCAGTGCTTCTTCTCTC 59.439 50.000 0.00 0.00 0.00 3.20
1849 4941 0.180171 CGATGGGCACTATGTTGGGA 59.820 55.000 0.00 0.00 0.00 4.37
1878 4970 2.107141 GGAACTCCTGATCGGCGG 59.893 66.667 7.21 0.00 0.00 6.13
2158 5259 0.462047 GGGGACACCAGCTAACGATG 60.462 60.000 0.00 0.00 39.85 3.84
2221 5333 1.656429 GCGCACCGATTAAACATAGCG 60.656 52.381 0.30 0.00 45.89 4.26
2235 5347 3.655810 CTGAGGTCTGAGGCGCACC 62.656 68.421 10.83 7.91 0.00 5.01
2259 5371 3.291809 TCACGATCTGACGCTTACAAA 57.708 42.857 0.00 0.00 36.70 2.83
2280 5403 8.221766 TGAAAACGAATTTTAAAAAGTTTGCGT 58.778 25.926 21.93 13.37 38.17 5.24
2482 8179 1.884075 CGACACCATCTTCACCGGGA 61.884 60.000 6.32 0.00 0.00 5.14
2505 8202 3.003173 CGGCCACCTCCTCCTTCA 61.003 66.667 2.24 0.00 0.00 3.02
2605 8302 1.688187 ATACGAGGAGCCCCCGTTT 60.688 57.895 6.14 0.00 39.15 3.60
2606 8303 2.042230 ATACGAGGAGCCCCCGTT 60.042 61.111 6.14 0.00 39.15 4.44
2611 8308 3.134458 CAAATTCTCATACGAGGAGCCC 58.866 50.000 0.00 0.00 39.95 5.19
2632 8329 6.019156 CGCTTAGAAGATCCACAAATCTCTTC 60.019 42.308 3.54 3.54 42.44 2.87
2644 8341 3.556004 CCCCTCATTCGCTTAGAAGATCC 60.556 52.174 0.00 0.00 42.92 3.36
2681 8382 1.807886 GTAGCGACCGTCACAGGAT 59.192 57.895 0.00 0.00 34.73 3.24
2684 8385 0.179171 AATCGTAGCGACCGTCACAG 60.179 55.000 0.00 0.00 39.18 3.66
2690 8391 3.060740 GGATAAACAAATCGTAGCGACCG 60.061 47.826 0.00 0.00 39.18 4.79
2703 8404 7.449086 ACGATTTAAACTCCCTTGGATAAACAA 59.551 33.333 0.00 0.00 0.00 2.83
2769 8474 1.753073 ACGGGGGAGTATTTGTCTACG 59.247 52.381 0.00 0.00 0.00 3.51
2835 8541 8.677300 ACAACGAGTGAAAATCATGCTATAAAT 58.323 29.630 0.00 0.00 0.00 1.40
2841 8547 5.412594 ACATACAACGAGTGAAAATCATGCT 59.587 36.000 0.00 0.00 0.00 3.79
2852 8558 6.024664 TGACAAAAACAACATACAACGAGTG 58.975 36.000 0.00 0.00 0.00 3.51
2874 8580 7.206687 GGTCCAATGATTACACAACTTTTTGA 58.793 34.615 0.00 0.00 36.48 2.69
2899 8609 7.234187 TCACTCTACAAAATTTAGCTATGCG 57.766 36.000 0.00 0.00 0.00 4.73
2909 8619 6.894339 AACCGGAATTCACTCTACAAAATT 57.106 33.333 9.46 0.00 0.00 1.82
3121 8831 1.470890 GGACTGGTTCACGAGAGAGAG 59.529 57.143 0.00 0.00 30.88 3.20
3588 9298 2.486636 TACGACGTGAGGGCTTGCTG 62.487 60.000 11.56 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.