Multiple sequence alignment - TraesCS5A01G392800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G392800 chr5A 100.000 6362 0 0 1 6362 588843824 588850185 0.000000e+00 11749.0
1 TraesCS5A01G392800 chr5A 88.277 853 100 0 3158 4010 588846840 588847692 0.000000e+00 1022.0
2 TraesCS5A01G392800 chr5A 88.277 853 100 0 3017 3869 588846981 588847833 0.000000e+00 1022.0
3 TraesCS5A01G392800 chr5A 87.376 705 89 0 3306 4010 588846847 588847551 0.000000e+00 809.0
4 TraesCS5A01G392800 chr5A 87.376 705 89 0 3024 3728 588847129 588847833 0.000000e+00 809.0
5 TraesCS5A01G392800 chr5A 86.195 565 78 0 3023 3587 588847269 588847833 4.220000e-171 612.0
6 TraesCS5A01G392800 chr5A 96.296 81 2 1 6283 6362 617205674 617205754 1.440000e-26 132.0
7 TraesCS5A01G392800 chr5A 94.118 85 5 0 6278 6362 622371605 622371689 5.180000e-26 130.0
8 TraesCS5A01G392800 chr5B 96.270 2654 82 9 3641 6290 575250029 575252669 0.000000e+00 4337.0
9 TraesCS5A01G392800 chr5B 93.611 1753 94 9 1706 3452 575248042 575249782 0.000000e+00 2601.0
10 TraesCS5A01G392800 chr5B 95.402 696 8 1 1 672 425386401 425387096 0.000000e+00 1086.0
11 TraesCS5A01G392800 chr5B 91.691 698 34 8 1 674 507643064 507643761 0.000000e+00 946.0
12 TraesCS5A01G392800 chr5B 84.350 492 31 11 1197 1665 575247574 575248042 2.110000e-119 440.0
13 TraesCS5A01G392800 chr5B 84.767 407 28 11 774 1150 575247167 575247569 1.670000e-100 377.0
14 TraesCS5A01G392800 chr5B 92.140 229 18 0 3782 4010 575250029 575250257 2.210000e-84 324.0
15 TraesCS5A01G392800 chr5B 96.154 52 1 1 1654 1704 581145013 581145064 4.090000e-12 84.2
16 TraesCS5A01G392800 chr5B 100.000 28 0 0 1073 1100 508798131 508798158 1.200000e-02 52.8
17 TraesCS5A01G392800 chr5D 95.487 2659 96 11 3636 6289 468648737 468651376 0.000000e+00 4224.0
18 TraesCS5A01G392800 chr5D 92.816 2102 125 9 1769 3869 468646178 468648254 0.000000e+00 3022.0
19 TraesCS5A01G392800 chr5D 89.024 902 97 2 3158 4058 468647402 468648302 0.000000e+00 1116.0
20 TraesCS5A01G392800 chr5D 87.518 705 88 0 3306 4010 468647409 468648113 0.000000e+00 815.0
21 TraesCS5A01G392800 chr5D 86.853 715 94 0 3014 3728 468647540 468648254 0.000000e+00 800.0
22 TraesCS5A01G392800 chr5D 85.993 564 79 0 3024 3587 468647691 468648254 7.060000e-169 604.0
23 TraesCS5A01G392800 chr5D 87.500 400 19 9 673 1049 468645220 468645611 3.520000e-117 433.0
24 TraesCS5A01G392800 chr5D 90.171 234 23 0 3777 4010 468648737 468648970 8.010000e-79 305.0
25 TraesCS5A01G392800 chr6A 95.396 695 8 1 1 671 77156971 77157665 0.000000e+00 1085.0
26 TraesCS5A01G392800 chr6A 96.104 77 3 0 6286 6362 84047080 84047156 6.700000e-25 126.0
27 TraesCS5A01G392800 chr3B 93.050 705 13 7 1 673 684913897 684914597 0.000000e+00 998.0
28 TraesCS5A01G392800 chr3B 97.403 77 2 0 6286 6362 494075585 494075661 1.440000e-26 132.0
29 TraesCS5A01G392800 chr2B 98.810 168 2 0 506 673 789287105 789286938 3.730000e-77 300.0
30 TraesCS5A01G392800 chr2B 95.455 44 1 1 1662 1704 726689048 726689005 1.140000e-07 69.4
31 TraesCS5A01G392800 chr2B 90.385 52 3 2 1651 1701 726693361 726693311 4.120000e-07 67.6
32 TraesCS5A01G392800 chr4B 95.349 86 4 0 6277 6362 13406450 13406365 3.090000e-28 137.0
33 TraesCS5A01G392800 chr4B 90.385 52 4 1 1663 1714 670388396 670388346 4.120000e-07 67.6
34 TraesCS5A01G392800 chr4A 97.403 77 2 0 6286 6362 638172429 638172353 1.440000e-26 132.0
35 TraesCS5A01G392800 chr4A 95.181 83 3 1 6280 6362 60677557 60677476 5.180000e-26 130.0
36 TraesCS5A01G392800 chr2A 97.403 77 2 0 6286 6362 361945817 361945893 1.440000e-26 132.0
37 TraesCS5A01G392800 chr2A 97.333 75 2 0 6288 6362 632925272 632925198 1.860000e-25 128.0
38 TraesCS5A01G392800 chr4D 97.619 42 1 0 1660 1701 494787185 494787226 8.850000e-09 73.1
39 TraesCS5A01G392800 chr3D 97.561 41 1 0 1670 1710 425566663 425566623 3.180000e-08 71.3
40 TraesCS5A01G392800 chr3D 90.196 51 2 2 1651 1701 464128376 464128329 5.320000e-06 63.9
41 TraesCS5A01G392800 chr7A 97.500 40 1 0 1671 1710 81863938 81863977 1.140000e-07 69.4
42 TraesCS5A01G392800 chr1A 84.286 70 6 5 606 673 153337056 153337122 5.320000e-06 63.9
43 TraesCS5A01G392800 chr7B 84.615 65 5 5 1639 1701 740996125 740996186 6.890000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G392800 chr5A 588843824 588850185 6361 False 2670.500 11749 89.58350 1 6362 6 chr5A.!!$F3 6361
1 TraesCS5A01G392800 chr5B 575247167 575252669 5502 False 1615.800 4337 90.22760 774 6290 5 chr5B.!!$F5 5516
2 TraesCS5A01G392800 chr5B 425386401 425387096 695 False 1086.000 1086 95.40200 1 672 1 chr5B.!!$F1 671
3 TraesCS5A01G392800 chr5B 507643064 507643761 697 False 946.000 946 91.69100 1 674 1 chr5B.!!$F2 673
4 TraesCS5A01G392800 chr5D 468645220 468651376 6156 False 1414.875 4224 89.42025 673 6289 8 chr5D.!!$F1 5616
5 TraesCS5A01G392800 chr6A 77156971 77157665 694 False 1085.000 1085 95.39600 1 671 1 chr6A.!!$F1 670
6 TraesCS5A01G392800 chr3B 684913897 684914597 700 False 998.000 998 93.05000 1 673 1 chr3B.!!$F2 672

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
975 1035 0.103937 CATCTCTGTCCCGCTTCTCC 59.896 60.0 0.00 0.00 0.00 3.71 F
1180 1280 0.163788 CCATTGCCGTCGCGATAATC 59.836 55.0 14.06 0.00 36.95 1.75 F
1181 1281 0.179275 CATTGCCGTCGCGATAATCG 60.179 55.0 14.06 11.39 43.89 3.34 F
1966 2141 0.323957 TCCACTTCGACTCGAGGAGA 59.676 55.0 18.41 12.54 36.48 3.71 F
3515 3691 0.119358 AGGAAGGCCAGACCCTAACT 59.881 55.0 5.01 0.00 40.58 2.24 F
4702 5795 0.106519 GGTAGGTGGGCATGCTCAAT 60.107 55.0 24.75 16.81 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1943 2118 0.169230 CTCGAGTCGAAGTGGAGGTG 59.831 60.000 17.27 0.00 34.74 4.00 R
2279 2454 1.134580 ACATGCTGGATCCTCGTTCTG 60.135 52.381 14.23 5.77 0.00 3.02 R
2484 2660 1.156736 CAAACAAGAGGTACCAGCGG 58.843 55.000 15.94 3.32 0.00 5.52 R
3560 3736 0.119155 TCCTCTGAGTTCCCCATGGT 59.881 55.000 11.73 0.00 0.00 3.55 R
4780 5873 0.582005 GCACGTTCTCCAGTGTGTTC 59.418 55.000 0.00 0.00 40.26 3.18 R
5833 6927 1.266718 CAGTTCAAACACATGGGACGG 59.733 52.381 0.00 0.00 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 109 2.169789 CAGTCGCAGGCATTCCTCG 61.170 63.158 0.00 0.00 41.93 4.63
674 707 5.854338 CGCGCACTTTTTAGAATTTAGGAAA 59.146 36.000 8.75 0.00 0.00 3.13
675 708 6.361214 CGCGCACTTTTTAGAATTTAGGAAAA 59.639 34.615 8.75 0.00 0.00 2.29
676 709 7.096394 CGCGCACTTTTTAGAATTTAGGAAAAA 60.096 33.333 8.75 0.00 31.76 1.94
677 710 8.002107 GCGCACTTTTTAGAATTTAGGAAAAAC 58.998 33.333 0.30 0.00 30.03 2.43
678 711 9.026074 CGCACTTTTTAGAATTTAGGAAAAACA 57.974 29.630 0.00 0.00 30.03 2.83
687 720 8.262601 AGAATTTAGGAAAAACATGTCCCTTT 57.737 30.769 0.00 0.00 34.13 3.11
709 742 2.099141 TCTGAAATTCCTGGCACGAG 57.901 50.000 0.00 0.00 0.00 4.18
710 743 1.623311 TCTGAAATTCCTGGCACGAGA 59.377 47.619 0.00 0.00 0.00 4.04
711 744 2.038426 TCTGAAATTCCTGGCACGAGAA 59.962 45.455 0.00 0.00 0.00 2.87
712 745 2.151202 TGAAATTCCTGGCACGAGAAC 58.849 47.619 0.00 0.00 0.00 3.01
714 747 0.673644 AATTCCTGGCACGAGAACGG 60.674 55.000 0.00 0.00 44.46 4.44
715 748 1.827399 ATTCCTGGCACGAGAACGGT 61.827 55.000 0.00 0.00 44.46 4.83
716 749 2.030562 CCTGGCACGAGAACGGTT 59.969 61.111 0.00 0.00 44.46 4.44
717 750 2.027625 CCTGGCACGAGAACGGTTC 61.028 63.158 12.91 12.91 44.46 3.62
787 827 0.888619 AGACGAGAGCGGTCAATTCA 59.111 50.000 18.15 0.00 43.17 2.57
868 921 0.249573 CCAAGGCTGCACACCAAAAG 60.250 55.000 0.50 0.00 0.00 2.27
869 922 0.746063 CAAGGCTGCACACCAAAAGA 59.254 50.000 0.50 0.00 0.00 2.52
960 1020 4.458829 TCCCGTCCCCTCGCATCT 62.459 66.667 0.00 0.00 0.00 2.90
975 1035 0.103937 CATCTCTGTCCCGCTTCTCC 59.896 60.000 0.00 0.00 0.00 3.71
1121 1220 1.505353 CCGTCACAGGTACGACTCC 59.495 63.158 0.00 0.00 42.90 3.85
1153 1253 0.961753 GGAGGAGGGTTTTGTGCTTG 59.038 55.000 0.00 0.00 0.00 4.01
1155 1255 1.115326 AGGAGGGTTTTGTGCTTGCC 61.115 55.000 0.00 0.00 0.00 4.52
1159 1259 1.007387 GGTTTTGTGCTTGCCTCCG 60.007 57.895 0.00 0.00 0.00 4.63
1168 1268 2.361104 TTGCCTCCGACCATTGCC 60.361 61.111 0.00 0.00 0.00 4.52
1170 1270 4.778143 GCCTCCGACCATTGCCGT 62.778 66.667 0.00 0.00 0.00 5.68
1176 1276 2.890474 GACCATTGCCGTCGCGAT 60.890 61.111 14.06 0.00 39.93 4.58
1177 1277 1.590525 GACCATTGCCGTCGCGATA 60.591 57.895 14.06 0.00 36.95 2.92
1178 1278 1.149361 GACCATTGCCGTCGCGATAA 61.149 55.000 14.06 6.30 36.95 1.75
1179 1279 0.531974 ACCATTGCCGTCGCGATAAT 60.532 50.000 14.06 8.49 36.95 1.28
1180 1280 0.163788 CCATTGCCGTCGCGATAATC 59.836 55.000 14.06 0.00 36.95 1.75
1181 1281 0.179275 CATTGCCGTCGCGATAATCG 60.179 55.000 14.06 11.39 43.89 3.34
1195 1295 5.817117 CGATAATCGCAGAAAAAGTTTCG 57.183 39.130 0.00 0.00 43.58 3.46
1199 1329 5.866503 AATCGCAGAAAAAGTTTCGTTTC 57.133 34.783 0.00 0.00 43.58 2.78
1209 1339 3.668596 AGTTTCGTTTCCGTTTCACAG 57.331 42.857 0.00 0.00 35.01 3.66
1227 1357 1.808390 GGACGCCGCGTTAATCTGT 60.808 57.895 21.18 0.00 41.37 3.41
1228 1358 1.629504 GACGCCGCGTTAATCTGTC 59.370 57.895 21.18 0.05 41.37 3.51
1229 1359 0.801067 GACGCCGCGTTAATCTGTCT 60.801 55.000 21.18 0.00 41.37 3.41
1230 1360 1.076533 ACGCCGCGTTAATCTGTCTG 61.077 55.000 13.85 0.00 36.35 3.51
1231 1361 1.348594 GCCGCGTTAATCTGTCTGC 59.651 57.895 4.92 0.00 0.00 4.26
1233 1363 1.631072 CGCGTTAATCTGTCTGCGG 59.369 57.895 0.00 0.00 41.69 5.69
1234 1364 1.076533 CGCGTTAATCTGTCTGCGGT 61.077 55.000 0.00 0.00 41.69 5.68
1235 1365 1.796253 CGCGTTAATCTGTCTGCGGTA 60.796 52.381 0.00 0.00 41.69 4.02
1240 1370 2.698855 AATCTGTCTGCGGTATTGCT 57.301 45.000 0.00 0.00 35.36 3.91
1255 1385 0.975556 TTGCTGCTCCCGGTCTCATA 60.976 55.000 0.00 0.00 0.00 2.15
1269 1399 5.413213 CCGGTCTCATAGTTGTCCTAGATAG 59.587 48.000 0.00 0.00 0.00 2.08
1307 1444 2.254546 TCGAACAAGTCAGCCAACAT 57.745 45.000 0.00 0.00 0.00 2.71
1328 1465 2.823924 TTGTGAAGCCGTGTAAGCTA 57.176 45.000 0.00 0.00 40.49 3.32
1333 1470 2.297880 TGAAGCCGTGTAAGCTACTGAA 59.702 45.455 0.00 0.00 40.49 3.02
1334 1471 2.656560 AGCCGTGTAAGCTACTGAAG 57.343 50.000 0.00 0.00 39.29 3.02
1344 1500 0.889306 GCTACTGAAGTGGGACGAGT 59.111 55.000 0.00 0.00 0.00 4.18
1352 1508 1.211190 GTGGGACGAGTGTACGGTC 59.789 63.158 0.00 0.00 37.61 4.79
1356 1512 0.731855 GGACGAGTGTACGGTCTTGC 60.732 60.000 0.00 0.00 37.61 4.01
1369 1535 3.181490 ACGGTCTTGCTTTTTCCTGTTTC 60.181 43.478 0.00 0.00 0.00 2.78
1408 1577 5.570320 AGGATAGCCTTTCTGTTTTTGCTA 58.430 37.500 0.00 0.00 43.90 3.49
1489 1658 3.005554 CAGTTATCAGCCACAACCAGAG 58.994 50.000 0.00 0.00 0.00 3.35
1536 1705 4.204978 ACTTAACAACGTTACACGACTTCG 59.795 41.667 0.00 0.00 46.05 3.79
1589 1758 0.462789 AGCGGTACCCCTGATTAACG 59.537 55.000 6.25 0.00 0.00 3.18
1591 1760 0.872881 CGGTACCCCTGATTAACGCG 60.873 60.000 3.53 3.53 0.00 6.01
1592 1761 1.156034 GGTACCCCTGATTAACGCGC 61.156 60.000 5.73 0.00 0.00 6.86
1606 1776 2.498887 GCGCGTGCTGTAAAACGG 60.499 61.111 15.02 0.00 40.12 4.44
1624 1794 2.233922 ACGGAAGTGGTAAGACATGAGG 59.766 50.000 0.00 0.00 46.97 3.86
1641 1811 6.381801 ACATGAGGCGAGAACTTTTATTTTG 58.618 36.000 0.00 0.00 0.00 2.44
1649 1819 6.623767 GCGAGAACTTTTATTTTGATCCAGCT 60.624 38.462 0.00 0.00 0.00 4.24
1653 1823 9.914131 AGAACTTTTATTTTGATCCAGCTTAAC 57.086 29.630 0.00 0.00 0.00 2.01
1666 1836 9.935241 TGATCCAGCTTAACATCTTCTAATATC 57.065 33.333 0.00 0.00 0.00 1.63
1680 1850 9.635404 ATCTTCTAATATCTAATACTCCCTCCG 57.365 37.037 0.00 0.00 0.00 4.63
1681 1851 8.613034 TCTTCTAATATCTAATACTCCCTCCGT 58.387 37.037 0.00 0.00 0.00 4.69
1682 1852 9.902684 CTTCTAATATCTAATACTCCCTCCGTA 57.097 37.037 0.00 0.00 0.00 4.02
1687 1857 9.597681 AATATCTAATACTCCCTCCGTAAAGAA 57.402 33.333 0.00 0.00 0.00 2.52
1688 1858 7.909485 ATCTAATACTCCCTCCGTAAAGAAA 57.091 36.000 0.00 0.00 0.00 2.52
1689 1859 7.909485 TCTAATACTCCCTCCGTAAAGAAAT 57.091 36.000 0.00 0.00 0.00 2.17
1690 1860 9.597681 ATCTAATACTCCCTCCGTAAAGAAATA 57.402 33.333 0.00 0.00 0.00 1.40
1691 1861 9.597681 TCTAATACTCCCTCCGTAAAGAAATAT 57.402 33.333 0.00 0.00 0.00 1.28
1695 1865 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
1696 1866 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
1697 1867 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
1698 1868 5.634020 CCCTCCGTAAAGAAATATAAGAGCG 59.366 44.000 0.00 0.00 0.00 5.03
1699 1869 6.214399 CCTCCGTAAAGAAATATAAGAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
1700 1870 6.700520 CCTCCGTAAAGAAATATAAGAGCGTT 59.299 38.462 0.00 0.00 0.00 4.84
1701 1871 7.864379 CCTCCGTAAAGAAATATAAGAGCGTTA 59.136 37.037 0.00 0.00 0.00 3.18
1702 1872 8.792831 TCCGTAAAGAAATATAAGAGCGTTAG 57.207 34.615 0.00 0.00 0.00 2.34
1703 1873 7.864379 TCCGTAAAGAAATATAAGAGCGTTAGG 59.136 37.037 0.00 0.00 0.00 2.69
1704 1874 7.115947 CCGTAAAGAAATATAAGAGCGTTAGGG 59.884 40.741 0.00 0.00 0.00 3.53
1705 1875 7.864379 CGTAAAGAAATATAAGAGCGTTAGGGA 59.136 37.037 0.00 0.00 0.00 4.20
1719 1889 3.426525 CGTTAGGGAGTACAAAACGACAC 59.573 47.826 5.73 0.00 44.11 3.67
1722 1892 2.140717 GGGAGTACAAAACGACACAGG 58.859 52.381 0.00 0.00 0.00 4.00
1755 1927 3.296628 GCATGTCGGTTGTTTACTTGTG 58.703 45.455 0.00 0.00 0.00 3.33
1764 1936 6.018588 TCGGTTGTTTACTTGTGTTGTGATAG 60.019 38.462 0.00 0.00 0.00 2.08
1767 1942 8.066000 GGTTGTTTACTTGTGTTGTGATAGTAC 58.934 37.037 0.00 0.00 0.00 2.73
1805 1980 2.024176 ACCTTGGGTTGGGGAATTTC 57.976 50.000 0.00 0.00 27.29 2.17
1837 2012 8.910351 AATAATAGTTGAATAAGGACAGGCTC 57.090 34.615 0.00 0.00 0.00 4.70
1838 2013 5.957771 ATAGTTGAATAAGGACAGGCTCA 57.042 39.130 0.00 0.00 0.00 4.26
1845 2020 5.104402 TGAATAAGGACAGGCTCATCATTCA 60.104 40.000 0.00 3.07 0.00 2.57
1868 2043 5.972107 ATTGCTCTTAATTTGCAGACACT 57.028 34.783 0.00 0.00 38.01 3.55
1935 2110 5.246203 ACAGCTATTAGCAATCCGGAGAATA 59.754 40.000 17.59 7.67 45.56 1.75
1936 2111 6.166279 CAGCTATTAGCAATCCGGAGAATAA 58.834 40.000 17.59 6.97 45.56 1.40
1940 2115 7.119846 GCTATTAGCAATCCGGAGAATAACAAT 59.880 37.037 11.34 6.07 41.89 2.71
1943 2118 4.576463 AGCAATCCGGAGAATAACAATGAC 59.424 41.667 11.34 0.00 0.00 3.06
1944 2119 4.335315 GCAATCCGGAGAATAACAATGACA 59.665 41.667 11.34 0.00 0.00 3.58
1947 2122 3.517901 TCCGGAGAATAACAATGACACCT 59.482 43.478 0.00 0.00 0.00 4.00
1949 2124 3.871594 CGGAGAATAACAATGACACCTCC 59.128 47.826 0.00 0.00 36.50 4.30
1951 2126 4.636206 GGAGAATAACAATGACACCTCCAC 59.364 45.833 0.00 0.00 38.91 4.02
1955 2130 2.169832 ACAATGACACCTCCACTTCG 57.830 50.000 0.00 0.00 0.00 3.79
1963 2138 0.961358 ACCTCCACTTCGACTCGAGG 60.961 60.000 18.41 8.90 44.74 4.63
1966 2141 0.323957 TCCACTTCGACTCGAGGAGA 59.676 55.000 18.41 12.54 36.48 3.71
1967 2142 1.065345 TCCACTTCGACTCGAGGAGAT 60.065 52.381 18.41 0.00 36.48 2.75
1968 2143 1.746220 CCACTTCGACTCGAGGAGATT 59.254 52.381 18.41 0.00 36.48 2.40
1969 2144 2.223386 CCACTTCGACTCGAGGAGATTC 60.223 54.545 18.41 3.52 36.48 2.52
1970 2145 2.420372 CACTTCGACTCGAGGAGATTCA 59.580 50.000 18.41 0.18 36.48 2.57
1971 2146 2.420722 ACTTCGACTCGAGGAGATTCAC 59.579 50.000 18.41 0.00 36.48 3.18
1980 2155 2.169352 CGAGGAGATTCACATTCACCCT 59.831 50.000 0.00 0.00 0.00 4.34
1984 2159 3.117738 GGAGATTCACATTCACCCTGGAT 60.118 47.826 0.00 0.00 0.00 3.41
1988 2163 2.710377 TCACATTCACCCTGGATTTCG 58.290 47.619 0.00 0.00 0.00 3.46
1993 2168 1.651737 TCACCCTGGATTTCGGAAGA 58.348 50.000 0.00 0.00 39.20 2.87
2006 2181 3.216187 TCGGAAGAACATTTGGGTGAA 57.784 42.857 0.00 0.00 37.03 3.18
2011 2186 5.670485 GGAAGAACATTTGGGTGAAAGTTT 58.330 37.500 0.00 0.00 0.00 2.66
2021 2196 3.118038 TGGGTGAAAGTTTAGTGCAGACT 60.118 43.478 0.00 0.00 36.07 3.24
2144 2319 1.422388 CACGTGACATCTCTGTGGTG 58.578 55.000 10.90 0.00 35.14 4.17
2150 2325 2.705658 TGACATCTCTGTGGTGGAAACT 59.294 45.455 0.00 0.00 35.14 2.66
2205 2380 5.640357 TCCGATGTAAGTTGCTTTCGTAATT 59.360 36.000 12.85 0.00 0.00 1.40
2273 2448 7.860872 CCCCTTTGAAACGCTAATGTTAATATC 59.139 37.037 0.00 0.00 0.00 1.63
2279 2454 9.858247 TGAAACGCTAATGTTAATATCGATTTC 57.142 29.630 1.71 0.00 0.00 2.17
2460 2636 6.389830 TCATGTTCATAACACAAGCACTTT 57.610 33.333 0.00 0.00 45.50 2.66
2486 2662 5.811399 TGATATTTCTTTGCCAACTACCG 57.189 39.130 0.00 0.00 0.00 4.02
2528 2704 4.031765 CGTCGATGGTTACTGAGAACAATG 59.968 45.833 0.00 0.00 0.00 2.82
2557 2733 3.364549 TCCTAAATGCATGGGTTTGAGG 58.635 45.455 0.00 0.00 0.00 3.86
2578 2754 7.121382 TGAGGCTAAAGAAAAATCCAGATGAT 58.879 34.615 0.00 0.00 34.22 2.45
2611 2787 8.138365 TGACAAACTCATTCACAGTAGTTAAC 57.862 34.615 0.00 0.00 32.09 2.01
2623 2799 2.095364 AGTAGTTAACGCAGAGACCACG 60.095 50.000 0.00 0.00 0.00 4.94
2667 2843 7.990886 TGTAGACAGTACCATTCAAAAGAACTT 59.009 33.333 0.00 0.00 0.00 2.66
2736 2912 2.170166 TGCAACATCCTTGGGTTCATC 58.830 47.619 0.00 0.00 0.00 2.92
2744 2920 0.804989 CTTGGGTTCATCCGTGCTTC 59.195 55.000 0.00 0.00 37.00 3.86
2751 2927 0.247460 TCATCCGTGCTTCACTCCAG 59.753 55.000 0.00 0.00 31.34 3.86
2859 3035 9.663904 TTCATCAACTGAAGAAAAAGTTTATCG 57.336 29.630 0.00 0.00 38.97 2.92
2898 3074 6.126863 AGATGTTACCAAACCTTCTGATCA 57.873 37.500 0.00 0.00 34.49 2.92
2944 3120 1.468914 GAGCACAAGAATTTCGGGTCC 59.531 52.381 0.00 0.00 0.00 4.46
3080 3256 5.742446 CAAACTTCTTTCAGAGAGGAAACG 58.258 41.667 0.00 0.00 35.19 3.60
3197 3373 4.532126 AGTCACATCCATTCAGTGAAGGTA 59.468 41.667 15.78 0.70 43.16 3.08
3290 3466 1.146566 GATCAGGAGGCATGGGGAATT 59.853 52.381 0.00 0.00 0.00 2.17
3354 3530 1.419387 AGGTGCAGACTTCTTTCAGCT 59.581 47.619 0.00 4.84 33.06 4.24
3426 3602 1.126948 TATGGATCAGGCGCCATGGA 61.127 55.000 31.54 22.91 44.30 3.41
3456 3632 1.672881 GCATGGATTTCAGAGGAACCG 59.327 52.381 0.00 0.00 31.35 4.44
3460 3636 1.555533 GGATTTCAGAGGAACCGGTCT 59.444 52.381 8.04 0.00 31.35 3.85
3469 3645 3.780850 AGAGGAACCGGTCTTATCCATTT 59.219 43.478 22.18 4.63 34.30 2.32
3495 3671 2.659428 AGGTGCAAACTTCTTTCAGCT 58.341 42.857 0.00 0.00 0.00 4.24
3496 3672 3.820557 AGGTGCAAACTTCTTTCAGCTA 58.179 40.909 0.00 0.00 34.26 3.32
3497 3673 3.817647 AGGTGCAAACTTCTTTCAGCTAG 59.182 43.478 0.00 0.00 34.26 3.42
3498 3674 3.057946 GGTGCAAACTTCTTTCAGCTAGG 60.058 47.826 0.00 0.00 0.00 3.02
3499 3675 3.815401 GTGCAAACTTCTTTCAGCTAGGA 59.185 43.478 0.00 0.00 0.00 2.94
3500 3676 4.275936 GTGCAAACTTCTTTCAGCTAGGAA 59.724 41.667 0.00 0.00 0.00 3.36
3501 3677 4.516698 TGCAAACTTCTTTCAGCTAGGAAG 59.483 41.667 6.78 6.78 40.41 3.46
3502 3678 4.083057 GCAAACTTCTTTCAGCTAGGAAGG 60.083 45.833 11.72 2.21 39.33 3.46
3503 3679 3.342377 ACTTCTTTCAGCTAGGAAGGC 57.658 47.619 11.72 0.00 39.33 4.35
3504 3680 2.026729 ACTTCTTTCAGCTAGGAAGGCC 60.027 50.000 11.72 0.00 39.33 5.19
3505 3681 1.656587 TCTTTCAGCTAGGAAGGCCA 58.343 50.000 5.01 0.00 36.29 5.36
3506 3682 1.556911 TCTTTCAGCTAGGAAGGCCAG 59.443 52.381 5.01 0.00 36.29 4.85
3507 3683 1.556911 CTTTCAGCTAGGAAGGCCAGA 59.443 52.381 5.01 0.00 36.29 3.86
3508 3684 0.905357 TTCAGCTAGGAAGGCCAGAC 59.095 55.000 5.01 0.00 36.29 3.51
3509 3685 0.978146 TCAGCTAGGAAGGCCAGACC 60.978 60.000 5.01 4.98 36.29 3.85
3510 3686 1.690985 AGCTAGGAAGGCCAGACCC 60.691 63.158 5.01 0.00 40.58 4.46
3511 3687 1.690985 GCTAGGAAGGCCAGACCCT 60.691 63.158 5.01 8.03 40.58 4.34
3512 3688 0.398664 GCTAGGAAGGCCAGACCCTA 60.399 60.000 5.01 8.81 40.58 3.53
3513 3689 1.970226 GCTAGGAAGGCCAGACCCTAA 60.970 57.143 5.01 0.00 40.58 2.69
3514 3690 1.763545 CTAGGAAGGCCAGACCCTAAC 59.236 57.143 5.01 0.00 40.58 2.34
3515 3691 0.119358 AGGAAGGCCAGACCCTAACT 59.881 55.000 5.01 0.00 40.58 2.24
3516 3692 0.992695 GGAAGGCCAGACCCTAACTT 59.007 55.000 5.01 0.00 40.58 2.66
3517 3693 1.065345 GGAAGGCCAGACCCTAACTTC 60.065 57.143 5.01 0.00 40.58 3.01
3518 3694 1.628846 GAAGGCCAGACCCTAACTTCA 59.371 52.381 5.01 0.00 40.58 3.02
3519 3695 1.280457 AGGCCAGACCCTAACTTCAG 58.720 55.000 5.01 0.00 40.58 3.02
3520 3696 0.253327 GGCCAGACCCTAACTTCAGG 59.747 60.000 0.00 0.00 35.26 3.86
3527 3703 3.558674 CCTAACTTCAGGGCAGGTG 57.441 57.895 0.00 0.00 31.47 4.00
3528 3704 0.693049 CCTAACTTCAGGGCAGGTGT 59.307 55.000 0.00 0.00 31.47 4.16
3529 3705 1.073923 CCTAACTTCAGGGCAGGTGTT 59.926 52.381 0.00 0.00 31.47 3.32
3530 3706 2.427506 CTAACTTCAGGGCAGGTGTTC 58.572 52.381 0.00 0.00 0.00 3.18
3531 3707 0.535102 AACTTCAGGGCAGGTGTTCG 60.535 55.000 0.00 0.00 0.00 3.95
3532 3708 1.071471 CTTCAGGGCAGGTGTTCGT 59.929 57.895 0.00 0.00 0.00 3.85
3533 3709 0.951040 CTTCAGGGCAGGTGTTCGTC 60.951 60.000 0.00 0.00 0.00 4.20
3534 3710 1.691195 TTCAGGGCAGGTGTTCGTCA 61.691 55.000 0.00 0.00 0.00 4.35
3535 3711 1.961277 CAGGGCAGGTGTTCGTCAC 60.961 63.158 5.28 5.28 45.47 3.67
3552 3728 9.423061 TGTTCGTCACAATATGAATATCTATGG 57.577 33.333 0.00 0.00 39.72 2.74
3553 3729 9.639601 GTTCGTCACAATATGAATATCTATGGA 57.360 33.333 0.00 0.00 39.72 3.41
3556 3732 9.807649 CGTCACAATATGAATATCTATGGATCA 57.192 33.333 0.00 0.00 39.72 2.92
3559 3735 9.053840 CACAATATGAATATCTATGGATCAGGC 57.946 37.037 0.00 0.00 33.71 4.85
3560 3736 8.775151 ACAATATGAATATCTATGGATCAGGCA 58.225 33.333 0.00 0.00 33.71 4.75
3561 3737 9.053840 CAATATGAATATCTATGGATCAGGCAC 57.946 37.037 0.00 0.00 33.71 5.01
3562 3738 5.426689 TGAATATCTATGGATCAGGCACC 57.573 43.478 0.00 0.00 33.71 5.01
3563 3739 4.845796 TGAATATCTATGGATCAGGCACCA 59.154 41.667 0.00 0.00 40.57 4.17
3564 3740 5.489997 TGAATATCTATGGATCAGGCACCAT 59.510 40.000 0.00 0.00 46.73 3.55
3565 3741 3.715638 ATCTATGGATCAGGCACCATG 57.284 47.619 0.00 0.00 45.08 3.66
3566 3742 1.701292 TCTATGGATCAGGCACCATGG 59.299 52.381 11.19 11.19 45.08 3.66
3567 3743 0.773014 TATGGATCAGGCACCATGGG 59.227 55.000 18.09 6.26 45.08 4.00
3568 3744 2.015243 ATGGATCAGGCACCATGGGG 62.015 60.000 18.09 14.63 44.01 4.96
3569 3745 2.386100 GGATCAGGCACCATGGGGA 61.386 63.158 21.28 6.48 38.05 4.81
3570 3746 1.614711 GATCAGGCACCATGGGGAA 59.385 57.895 21.28 0.00 38.05 3.97
3571 3747 0.753111 GATCAGGCACCATGGGGAAC 60.753 60.000 21.28 9.92 38.05 3.62
3572 3748 1.217057 ATCAGGCACCATGGGGAACT 61.217 55.000 21.28 12.46 38.05 3.01
3573 3749 1.379044 CAGGCACCATGGGGAACTC 60.379 63.158 21.28 3.38 38.05 3.01
3574 3750 1.852157 AGGCACCATGGGGAACTCA 60.852 57.895 21.28 0.00 38.05 3.41
3575 3751 1.379044 GGCACCATGGGGAACTCAG 60.379 63.158 21.28 0.00 38.05 3.35
3576 3752 1.685224 GCACCATGGGGAACTCAGA 59.315 57.895 21.28 0.00 38.05 3.27
3577 3753 0.393537 GCACCATGGGGAACTCAGAG 60.394 60.000 21.28 0.00 38.05 3.35
3578 3754 0.254178 CACCATGGGGAACTCAGAGG 59.746 60.000 18.09 0.00 38.05 3.69
3579 3755 0.119155 ACCATGGGGAACTCAGAGGA 59.881 55.000 18.09 0.00 38.05 3.71
3580 3756 1.274650 ACCATGGGGAACTCAGAGGAT 60.275 52.381 18.09 0.00 38.05 3.24
3581 3757 1.142465 CCATGGGGAACTCAGAGGATG 59.858 57.143 2.85 0.00 35.59 3.51
3582 3758 1.142465 CATGGGGAACTCAGAGGATGG 59.858 57.143 1.53 0.00 0.00 3.51
3583 3759 0.417437 TGGGGAACTCAGAGGATGGA 59.583 55.000 1.53 0.00 0.00 3.41
3584 3760 1.010046 TGGGGAACTCAGAGGATGGAT 59.990 52.381 1.53 0.00 0.00 3.41
3585 3761 2.131023 GGGGAACTCAGAGGATGGATT 58.869 52.381 1.53 0.00 0.00 3.01
3586 3762 2.511637 GGGGAACTCAGAGGATGGATTT 59.488 50.000 1.53 0.00 0.00 2.17
3587 3763 3.434310 GGGGAACTCAGAGGATGGATTTC 60.434 52.174 1.53 0.00 0.00 2.17
3588 3764 3.200825 GGGAACTCAGAGGATGGATTTCA 59.799 47.826 1.53 0.00 0.00 2.69
3589 3765 4.450053 GGAACTCAGAGGATGGATTTCAG 58.550 47.826 1.53 0.00 0.00 3.02
3590 3766 4.163078 GGAACTCAGAGGATGGATTTCAGA 59.837 45.833 1.53 0.00 0.00 3.27
3591 3767 5.356291 AACTCAGAGGATGGATTTCAGAG 57.644 43.478 1.53 0.00 32.63 3.35
3592 3768 3.710677 ACTCAGAGGATGGATTTCAGAGG 59.289 47.826 1.53 0.00 31.18 3.69
3593 3769 3.966006 CTCAGAGGATGGATTTCAGAGGA 59.034 47.826 0.00 0.00 0.00 3.71
3594 3770 4.365368 TCAGAGGATGGATTTCAGAGGAA 58.635 43.478 0.00 0.00 0.00 3.36
3595 3771 4.163078 TCAGAGGATGGATTTCAGAGGAAC 59.837 45.833 0.00 0.00 31.35 3.62
3596 3772 3.457749 AGAGGATGGATTTCAGAGGAACC 59.542 47.826 0.00 0.00 31.35 3.62
3597 3773 3.192944 AGGATGGATTTCAGAGGAACCA 58.807 45.455 0.00 0.00 34.70 3.67
3598 3774 3.201708 AGGATGGATTTCAGAGGAACCAG 59.798 47.826 0.00 0.00 33.97 4.00
3599 3775 3.054065 GGATGGATTTCAGAGGAACCAGT 60.054 47.826 0.00 0.00 33.97 4.00
3600 3776 3.703001 TGGATTTCAGAGGAACCAGTC 57.297 47.619 0.00 0.00 31.35 3.51
3601 3777 2.028112 TGGATTTCAGAGGAACCAGTCG 60.028 50.000 0.00 0.00 31.35 4.18
3602 3778 2.028020 GGATTTCAGAGGAACCAGTCGT 60.028 50.000 0.00 0.00 31.35 4.34
3603 3779 3.194968 GGATTTCAGAGGAACCAGTCGTA 59.805 47.826 0.00 0.00 31.35 3.43
3604 3780 4.141914 GGATTTCAGAGGAACCAGTCGTAT 60.142 45.833 0.00 0.00 31.35 3.06
3605 3781 4.451629 TTTCAGAGGAACCAGTCGTATC 57.548 45.455 0.00 0.00 31.35 2.24
3606 3782 2.376109 TCAGAGGAACCAGTCGTATCC 58.624 52.381 0.00 0.00 0.00 2.59
3607 3783 2.100197 CAGAGGAACCAGTCGTATCCA 58.900 52.381 0.00 0.00 34.30 3.41
3608 3784 2.695666 CAGAGGAACCAGTCGTATCCAT 59.304 50.000 0.00 0.00 34.30 3.41
3609 3785 3.133003 CAGAGGAACCAGTCGTATCCATT 59.867 47.826 0.00 0.00 34.30 3.16
3610 3786 3.385111 AGAGGAACCAGTCGTATCCATTC 59.615 47.826 0.00 0.00 34.30 2.67
3611 3787 3.375699 AGGAACCAGTCGTATCCATTCT 58.624 45.455 0.00 0.00 34.30 2.40
3612 3788 4.543689 AGGAACCAGTCGTATCCATTCTA 58.456 43.478 0.00 0.00 34.30 2.10
3613 3789 5.148502 AGGAACCAGTCGTATCCATTCTAT 58.851 41.667 0.00 0.00 34.30 1.98
3614 3790 5.011125 AGGAACCAGTCGTATCCATTCTATG 59.989 44.000 0.00 0.00 34.30 2.23
3615 3791 5.010719 GGAACCAGTCGTATCCATTCTATGA 59.989 44.000 0.00 0.00 32.08 2.15
3616 3792 6.462487 GGAACCAGTCGTATCCATTCTATGAA 60.462 42.308 0.00 0.00 32.08 2.57
3617 3793 6.090483 ACCAGTCGTATCCATTCTATGAAG 57.910 41.667 0.00 0.00 0.00 3.02
3618 3794 5.011125 ACCAGTCGTATCCATTCTATGAAGG 59.989 44.000 0.00 0.00 0.00 3.46
3619 3795 5.011125 CCAGTCGTATCCATTCTATGAAGGT 59.989 44.000 0.00 0.00 0.00 3.50
3620 3796 5.923114 CAGTCGTATCCATTCTATGAAGGTG 59.077 44.000 0.00 0.00 0.00 4.00
3621 3797 5.833667 AGTCGTATCCATTCTATGAAGGTGA 59.166 40.000 0.00 0.00 0.00 4.02
3622 3798 6.323996 AGTCGTATCCATTCTATGAAGGTGAA 59.676 38.462 0.00 0.00 0.00 3.18
3623 3799 6.984474 GTCGTATCCATTCTATGAAGGTGAAA 59.016 38.462 0.00 0.00 0.00 2.69
3624 3800 7.494625 GTCGTATCCATTCTATGAAGGTGAAAA 59.505 37.037 0.00 0.00 0.00 2.29
3625 3801 7.494625 TCGTATCCATTCTATGAAGGTGAAAAC 59.505 37.037 0.00 0.00 0.00 2.43
3626 3802 7.495934 CGTATCCATTCTATGAAGGTGAAAACT 59.504 37.037 0.00 0.00 0.00 2.66
3627 3803 9.178758 GTATCCATTCTATGAAGGTGAAAACTT 57.821 33.333 0.00 0.00 0.00 2.66
3628 3804 7.687941 TCCATTCTATGAAGGTGAAAACTTC 57.312 36.000 0.00 0.00 43.52 3.01
3629 3805 7.461749 TCCATTCTATGAAGGTGAAAACTTCT 58.538 34.615 6.60 0.00 43.59 2.85
3630 3806 7.607991 TCCATTCTATGAAGGTGAAAACTTCTC 59.392 37.037 6.60 0.00 43.59 2.87
3631 3807 7.609532 CCATTCTATGAAGGTGAAAACTTCTCT 59.390 37.037 6.60 0.00 43.59 3.10
3632 3808 8.663911 CATTCTATGAAGGTGAAAACTTCTCTC 58.336 37.037 6.60 0.00 43.59 3.20
3633 3809 7.303182 TCTATGAAGGTGAAAACTTCTCTCA 57.697 36.000 6.60 0.00 43.59 3.27
3634 3810 7.382110 TCTATGAAGGTGAAAACTTCTCTCAG 58.618 38.462 6.60 0.00 43.59 3.35
3635 3811 4.130118 TGAAGGTGAAAACTTCTCTCAGC 58.870 43.478 6.60 0.00 43.59 4.26
3636 3812 4.141620 TGAAGGTGAAAACTTCTCTCAGCT 60.142 41.667 6.60 0.00 46.86 4.24
4041 5132 5.510861 GCTATTTGGATCATACCAGTACCGT 60.511 44.000 0.00 0.00 41.19 4.83
4044 5135 5.936187 TTGGATCATACCAGTACCGTAAA 57.064 39.130 0.00 0.00 41.19 2.01
4045 5136 5.524971 TGGATCATACCAGTACCGTAAAG 57.475 43.478 0.00 0.00 34.77 1.85
4610 5703 8.816640 TTTTCTAGGAAAAATGTTGATTCTGC 57.183 30.769 0.00 0.00 0.00 4.26
4663 5756 6.216868 ACCATACCTACTGTTTTCTTGGGTAT 59.783 38.462 0.00 0.00 38.57 2.73
4702 5795 0.106519 GGTAGGTGGGCATGCTCAAT 60.107 55.000 24.75 16.81 0.00 2.57
4780 5873 1.167851 AATGCACAATGACTGGACGG 58.832 50.000 0.00 0.00 0.00 4.79
4982 6075 8.999431 CATATACCAGTGTCTTGTTTAACTGTT 58.001 33.333 0.00 0.00 38.68 3.16
5031 6124 6.964807 ATTTTCATGCCTATGTTATGCAGA 57.035 33.333 0.00 0.00 38.58 4.26
5121 6214 5.794687 TTCACCATTTCATGTCGATGTAC 57.205 39.130 0.00 0.00 0.00 2.90
5131 6224 6.373186 TCATGTCGATGTACTTACCTAGTG 57.627 41.667 0.00 0.00 37.73 2.74
5144 6237 5.243283 ACTTACCTAGTGACCTGTTACACTG 59.757 44.000 0.00 0.00 45.20 3.66
5228 6321 2.541762 GCATGTATCTGGAGAAACTCGC 59.458 50.000 0.00 0.00 0.00 5.03
5520 6613 3.131046 GCATCGAAGATTGGATTTTGGGT 59.869 43.478 0.00 0.00 45.12 4.51
5549 6642 8.540492 CAACAGTTATAACTTGTACGGATGATC 58.460 37.037 15.60 0.00 37.08 2.92
5582 6675 4.764679 TGAATGAATTTTGAGACGGTGG 57.235 40.909 0.00 0.00 0.00 4.61
5585 6678 2.582052 TGAATTTTGAGACGGTGGCTT 58.418 42.857 0.00 0.00 0.00 4.35
5588 6681 4.215399 TGAATTTTGAGACGGTGGCTTAAG 59.785 41.667 0.00 0.00 0.00 1.85
5644 6737 9.765795 TTTGTTCAGTTTTTCTTCCAGTTTTTA 57.234 25.926 0.00 0.00 0.00 1.52
5645 6738 9.936759 TTGTTCAGTTTTTCTTCCAGTTTTTAT 57.063 25.926 0.00 0.00 0.00 1.40
5646 6739 9.364989 TGTTCAGTTTTTCTTCCAGTTTTTATG 57.635 29.630 0.00 0.00 0.00 1.90
5648 6741 8.073467 TCAGTTTTTCTTCCAGTTTTTATGGT 57.927 30.769 0.00 0.00 39.01 3.55
5687 6781 0.034574 TGCTGTGGGTCTGTGTTGTT 60.035 50.000 0.00 0.00 0.00 2.83
5856 6950 2.362077 GTCCCATGTGTTTGAACTGCTT 59.638 45.455 0.00 0.00 0.00 3.91
5905 7000 7.147976 TCTACAGAACATGTATGGATTCATCG 58.852 38.462 13.77 0.00 43.44 3.84
5917 7012 3.436359 TGGATTCATCGTTGTGACATGTG 59.564 43.478 1.15 0.00 0.00 3.21
5918 7013 2.967459 TTCATCGTTGTGACATGTGC 57.033 45.000 1.15 0.00 0.00 4.57
5989 7085 4.202233 TGCCAAACATGAAATCAAAGCTCA 60.202 37.500 0.00 0.00 0.00 4.26
6008 7104 5.422666 CTCACAAAGCTATGTTCACACAA 57.577 39.130 0.00 0.00 36.16 3.33
6136 7232 9.700831 AGCCTGTTTGTTTCTCCTAATATTATT 57.299 29.630 0.00 0.00 0.00 1.40
6182 7278 6.436843 AGCTTTGTACAAATAATTCCTCCG 57.563 37.500 20.83 6.96 0.00 4.63
6219 7315 7.652909 TGTTTTTCATTTCAGATGACATTGTCC 59.347 33.333 14.05 0.00 0.00 4.02
6296 7392 6.462552 GAGTATTTTTAGTACTCCCTCCGT 57.537 41.667 0.00 0.00 41.27 4.69
6297 7393 6.864151 AGTATTTTTAGTACTCCCTCCGTT 57.136 37.500 0.00 0.00 0.00 4.44
6298 7394 6.871844 AGTATTTTTAGTACTCCCTCCGTTC 58.128 40.000 0.00 0.00 0.00 3.95
6299 7395 5.750352 ATTTTTAGTACTCCCTCCGTTCA 57.250 39.130 0.00 0.00 0.00 3.18
6300 7396 4.525912 TTTTAGTACTCCCTCCGTTCAC 57.474 45.455 0.00 0.00 0.00 3.18
6301 7397 3.446442 TTAGTACTCCCTCCGTTCACT 57.554 47.619 0.00 0.00 0.00 3.41
6302 7398 2.305858 AGTACTCCCTCCGTTCACTT 57.694 50.000 0.00 0.00 0.00 3.16
6303 7399 2.606378 AGTACTCCCTCCGTTCACTTT 58.394 47.619 0.00 0.00 0.00 2.66
6304 7400 2.970640 AGTACTCCCTCCGTTCACTTTT 59.029 45.455 0.00 0.00 0.00 2.27
6305 7401 4.154942 AGTACTCCCTCCGTTCACTTTTA 58.845 43.478 0.00 0.00 0.00 1.52
6306 7402 4.776308 AGTACTCCCTCCGTTCACTTTTAT 59.224 41.667 0.00 0.00 0.00 1.40
6307 7403 5.954150 AGTACTCCCTCCGTTCACTTTTATA 59.046 40.000 0.00 0.00 0.00 0.98
6308 7404 5.750352 ACTCCCTCCGTTCACTTTTATAA 57.250 39.130 0.00 0.00 0.00 0.98
6309 7405 6.117975 ACTCCCTCCGTTCACTTTTATAAA 57.882 37.500 0.00 0.00 0.00 1.40
6310 7406 6.718294 ACTCCCTCCGTTCACTTTTATAAAT 58.282 36.000 0.00 0.00 0.00 1.40
6311 7407 6.822170 ACTCCCTCCGTTCACTTTTATAAATC 59.178 38.462 0.00 0.00 0.00 2.17
6312 7408 6.713276 TCCCTCCGTTCACTTTTATAAATCA 58.287 36.000 0.00 0.00 0.00 2.57
6313 7409 7.343357 TCCCTCCGTTCACTTTTATAAATCAT 58.657 34.615 0.00 0.00 0.00 2.45
6314 7410 7.832187 TCCCTCCGTTCACTTTTATAAATCATT 59.168 33.333 0.00 0.00 0.00 2.57
6315 7411 8.466798 CCCTCCGTTCACTTTTATAAATCATTT 58.533 33.333 0.00 0.00 0.00 2.32
6316 7412 9.503427 CCTCCGTTCACTTTTATAAATCATTTC 57.497 33.333 0.00 0.00 0.00 2.17
6341 7437 8.679288 CAGACAACTGAAAATAGGCTATTTTG 57.321 34.615 36.95 28.05 45.52 2.44
6342 7438 7.274250 CAGACAACTGAAAATAGGCTATTTTGC 59.726 37.037 36.95 28.47 45.52 3.68
6343 7439 6.991938 ACAACTGAAAATAGGCTATTTTGCA 58.008 32.000 36.95 30.38 45.52 4.08
6344 7440 6.868339 ACAACTGAAAATAGGCTATTTTGCAC 59.132 34.615 36.95 26.37 45.52 4.57
6345 7441 6.588719 ACTGAAAATAGGCTATTTTGCACA 57.411 33.333 36.95 28.54 45.52 4.57
6346 7442 7.174107 ACTGAAAATAGGCTATTTTGCACAT 57.826 32.000 36.95 20.38 45.52 3.21
6347 7443 7.614494 ACTGAAAATAGGCTATTTTGCACATT 58.386 30.769 36.95 23.92 45.52 2.71
6348 7444 7.546667 ACTGAAAATAGGCTATTTTGCACATTG 59.453 33.333 36.95 24.72 45.52 2.82
6349 7445 7.385267 TGAAAATAGGCTATTTTGCACATTGT 58.615 30.769 36.95 18.56 45.52 2.71
6350 7446 7.545265 TGAAAATAGGCTATTTTGCACATTGTC 59.455 33.333 36.95 24.11 45.52 3.18
6351 7447 6.780457 AATAGGCTATTTTGCACATTGTCT 57.220 33.333 13.96 0.00 34.04 3.41
6352 7448 4.445452 AGGCTATTTTGCACATTGTCTG 57.555 40.909 0.00 0.00 34.04 3.51
6353 7449 4.081406 AGGCTATTTTGCACATTGTCTGA 58.919 39.130 0.00 0.00 34.04 3.27
6354 7450 4.523943 AGGCTATTTTGCACATTGTCTGAA 59.476 37.500 0.00 0.00 34.04 3.02
6355 7451 5.010922 AGGCTATTTTGCACATTGTCTGAAA 59.989 36.000 0.00 0.00 34.04 2.69
6356 7452 5.870978 GGCTATTTTGCACATTGTCTGAAAT 59.129 36.000 0.00 0.00 34.04 2.17
6357 7453 7.035004 GGCTATTTTGCACATTGTCTGAAATA 58.965 34.615 0.00 0.00 34.04 1.40
6358 7454 7.707893 GGCTATTTTGCACATTGTCTGAAATAT 59.292 33.333 0.00 0.00 34.04 1.28
6359 7455 8.749499 GCTATTTTGCACATTGTCTGAAATATC 58.251 33.333 0.00 0.00 0.00 1.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 109 2.457366 AATCGTGTGACCTTGAGACC 57.543 50.000 0.00 0.00 0.00 3.85
687 720 3.218453 TCGTGCCAGGAATTTCAGAAAA 58.782 40.909 0.00 0.00 0.00 2.29
691 724 2.099141 TCTCGTGCCAGGAATTTCAG 57.901 50.000 0.00 0.00 0.00 3.02
706 739 2.499896 GTGTAGTACGAACCGTTCTCG 58.500 52.381 9.55 0.48 41.54 4.04
709 742 1.729149 CGGGTGTAGTACGAACCGTTC 60.729 57.143 16.44 0.76 41.54 3.95
710 743 0.240945 CGGGTGTAGTACGAACCGTT 59.759 55.000 16.44 0.00 41.54 4.44
711 744 0.605319 TCGGGTGTAGTACGAACCGT 60.605 55.000 21.02 0.00 44.35 4.83
712 745 0.097674 CTCGGGTGTAGTACGAACCG 59.902 60.000 17.83 17.83 42.45 4.44
714 747 1.201965 CGACTCGGGTGTAGTACGAAC 60.202 57.143 0.00 0.00 36.08 3.95
715 748 1.078709 CGACTCGGGTGTAGTACGAA 58.921 55.000 0.00 0.00 36.08 3.85
716 749 0.740868 CCGACTCGGGTGTAGTACGA 60.741 60.000 9.85 0.00 44.15 3.43
717 750 1.717937 CCGACTCGGGTGTAGTACG 59.282 63.158 9.85 0.00 44.15 3.67
758 798 2.045242 TCTCGTCTCTGGGTCCGG 60.045 66.667 0.00 0.00 0.00 5.14
772 812 2.902065 GGTTTGAATTGACCGCTCTC 57.098 50.000 0.00 0.00 0.00 3.20
787 827 2.898343 GTGTGTCGCCACCGGTTT 60.898 61.111 2.97 0.00 41.09 3.27
868 921 2.202324 GAGTGACGACGACGCCTC 60.202 66.667 7.30 6.81 43.96 4.70
869 922 3.735029 GGAGTGACGACGACGCCT 61.735 66.667 7.30 0.62 43.96 5.52
956 1016 0.103937 GGAGAAGCGGGACAGAGATG 59.896 60.000 0.00 0.00 0.00 2.90
957 1017 0.324738 TGGAGAAGCGGGACAGAGAT 60.325 55.000 0.00 0.00 0.00 2.75
960 1020 0.537188 GAATGGAGAAGCGGGACAGA 59.463 55.000 0.00 0.00 0.00 3.41
975 1035 1.874019 CTGACGTCGGAGCGGAATG 60.874 63.158 20.01 0.00 35.98 2.67
1159 1259 1.149361 TTATCGCGACGGCAATGGTC 61.149 55.000 12.93 0.00 39.92 4.02
1173 1273 5.313623 ACGAAACTTTTTCTGCGATTATCG 58.686 37.500 10.56 10.56 43.89 2.92
1174 1274 7.201240 GGAAACGAAACTTTTTCTGCGATTATC 60.201 37.037 0.00 0.00 33.10 1.75
1175 1275 6.581166 GGAAACGAAACTTTTTCTGCGATTAT 59.419 34.615 0.00 0.00 33.10 1.28
1176 1276 5.910723 GGAAACGAAACTTTTTCTGCGATTA 59.089 36.000 0.00 0.00 33.10 1.75
1177 1277 4.738252 GGAAACGAAACTTTTTCTGCGATT 59.262 37.500 0.00 0.00 33.10 3.34
1178 1278 4.287720 GGAAACGAAACTTTTTCTGCGAT 58.712 39.130 0.00 0.00 33.10 4.58
1179 1279 3.687200 GGAAACGAAACTTTTTCTGCGA 58.313 40.909 0.00 0.00 33.10 5.10
1199 1329 3.411351 CGGCGTCCTGTGAAACGG 61.411 66.667 0.00 0.00 44.86 4.44
1209 1339 1.749609 GACAGATTAACGCGGCGTCC 61.750 60.000 29.53 17.15 39.99 4.79
1227 1357 1.153369 GGAGCAGCAATACCGCAGA 60.153 57.895 0.00 0.00 0.00 4.26
1228 1358 2.182842 GGGAGCAGCAATACCGCAG 61.183 63.158 0.00 0.00 0.00 5.18
1229 1359 2.124736 GGGAGCAGCAATACCGCA 60.125 61.111 0.00 0.00 0.00 5.69
1230 1360 3.272334 CGGGAGCAGCAATACCGC 61.272 66.667 0.00 0.00 37.93 5.68
1231 1361 2.588877 CCGGGAGCAGCAATACCG 60.589 66.667 0.00 0.00 43.89 4.02
1233 1363 0.530870 GAGACCGGGAGCAGCAATAC 60.531 60.000 6.32 0.00 0.00 1.89
1234 1364 0.975556 TGAGACCGGGAGCAGCAATA 60.976 55.000 6.32 0.00 0.00 1.90
1235 1365 1.630126 ATGAGACCGGGAGCAGCAAT 61.630 55.000 6.32 0.00 0.00 3.56
1240 1370 0.824109 CAACTATGAGACCGGGAGCA 59.176 55.000 6.32 0.00 0.00 4.26
1255 1385 7.041916 CGAATTACTCGTCTATCTAGGACAACT 60.042 40.741 0.00 0.00 42.89 3.16
1285 1415 1.002792 GTTGGCTGACTTGTTCGAACC 60.003 52.381 24.78 10.31 0.00 3.62
1307 1444 2.294074 AGCTTACACGGCTTCACAAAA 58.706 42.857 0.00 0.00 36.56 2.44
1328 1465 1.612463 GTACACTCGTCCCACTTCAGT 59.388 52.381 0.00 0.00 0.00 3.41
1333 1470 1.228367 ACCGTACACTCGTCCCACT 60.228 57.895 0.00 0.00 0.00 4.00
1334 1471 1.211190 GACCGTACACTCGTCCCAC 59.789 63.158 0.00 0.00 0.00 4.61
1344 1500 2.875933 CAGGAAAAAGCAAGACCGTACA 59.124 45.455 0.00 0.00 0.00 2.90
1352 1508 4.406648 AAGGGAAACAGGAAAAAGCAAG 57.593 40.909 0.00 0.00 0.00 4.01
1356 1512 5.977635 ACAAGAAAGGGAAACAGGAAAAAG 58.022 37.500 0.00 0.00 0.00 2.27
1369 1535 4.571176 GCTATCCTACGAAACAAGAAAGGG 59.429 45.833 0.00 0.00 0.00 3.95
1425 1594 4.403453 GCCAACTATAACGCAACAGAAAG 58.597 43.478 0.00 0.00 0.00 2.62
1426 1595 3.120477 CGCCAACTATAACGCAACAGAAA 60.120 43.478 0.00 0.00 0.00 2.52
1427 1596 2.413796 CGCCAACTATAACGCAACAGAA 59.586 45.455 0.00 0.00 0.00 3.02
1428 1597 1.996898 CGCCAACTATAACGCAACAGA 59.003 47.619 0.00 0.00 0.00 3.41
1429 1598 1.996898 TCGCCAACTATAACGCAACAG 59.003 47.619 0.00 0.00 0.00 3.16
1430 1599 2.081725 TCGCCAACTATAACGCAACA 57.918 45.000 0.00 0.00 0.00 3.33
1431 1600 2.605818 TGATCGCCAACTATAACGCAAC 59.394 45.455 0.00 0.00 0.00 4.17
1432 1601 2.863740 CTGATCGCCAACTATAACGCAA 59.136 45.455 0.00 0.00 0.00 4.85
1433 1602 2.469826 CTGATCGCCAACTATAACGCA 58.530 47.619 0.00 0.00 0.00 5.24
1434 1603 1.192534 GCTGATCGCCAACTATAACGC 59.807 52.381 0.00 0.00 0.00 4.84
1435 1604 2.743938 AGCTGATCGCCAACTATAACG 58.256 47.619 6.02 0.00 40.39 3.18
1436 1605 5.522460 TGTTTAGCTGATCGCCAACTATAAC 59.478 40.000 0.00 0.00 40.39 1.89
1437 1606 5.666462 TGTTTAGCTGATCGCCAACTATAA 58.334 37.500 0.00 4.46 40.39 0.98
1438 1607 5.270893 TGTTTAGCTGATCGCCAACTATA 57.729 39.130 0.00 0.07 40.39 1.31
1439 1608 4.137116 TGTTTAGCTGATCGCCAACTAT 57.863 40.909 0.00 0.75 40.39 2.12
1440 1609 3.603158 TGTTTAGCTGATCGCCAACTA 57.397 42.857 0.00 1.89 40.39 2.24
1441 1610 2.472695 TGTTTAGCTGATCGCCAACT 57.527 45.000 0.00 2.61 40.39 3.16
1489 1658 7.873505 AGTTTCTGTATTTCTGTCAGTAGGTTC 59.126 37.037 0.00 0.00 0.00 3.62
1536 1705 5.545588 TCATTGATCCTAGCTAACATCTGC 58.454 41.667 11.21 0.00 0.00 4.26
1574 1743 1.485032 CGCGCGTTAATCAGGGGTAC 61.485 60.000 24.19 0.00 0.00 3.34
1581 1750 0.733223 TACAGCACGCGCGTTAATCA 60.733 50.000 35.90 16.09 45.49 2.57
1589 1758 2.432841 TTCCGTTTTACAGCACGCGC 62.433 55.000 5.73 0.00 34.98 6.86
1591 1760 0.584876 ACTTCCGTTTTACAGCACGC 59.415 50.000 0.00 0.00 34.98 5.34
1592 1761 1.070175 CCACTTCCGTTTTACAGCACG 60.070 52.381 0.00 0.00 36.12 5.34
1606 1776 2.094182 TCGCCTCATGTCTTACCACTTC 60.094 50.000 0.00 0.00 0.00 3.01
1614 1784 3.409026 AAAGTTCTCGCCTCATGTCTT 57.591 42.857 0.00 0.00 0.00 3.01
1624 1794 5.513141 GCTGGATCAAAATAAAAGTTCTCGC 59.487 40.000 0.00 0.00 0.00 5.03
1665 1835 7.909485 ATTTCTTTACGGAGGGAGTATTAGA 57.091 36.000 0.00 0.00 0.00 2.10
1669 1839 9.597681 TCTTATATTTCTTTACGGAGGGAGTAT 57.402 33.333 0.00 0.00 0.00 2.12
1670 1840 9.075678 CTCTTATATTTCTTTACGGAGGGAGTA 57.924 37.037 0.00 0.00 0.00 2.59
1671 1841 7.471679 GCTCTTATATTTCTTTACGGAGGGAGT 60.472 40.741 0.00 0.00 0.00 3.85
1672 1842 6.869388 GCTCTTATATTTCTTTACGGAGGGAG 59.131 42.308 0.00 0.00 0.00 4.30
1673 1843 6.516194 CGCTCTTATATTTCTTTACGGAGGGA 60.516 42.308 0.00 0.00 34.63 4.20
1674 1844 5.634020 CGCTCTTATATTTCTTTACGGAGGG 59.366 44.000 0.00 0.00 0.00 4.30
1675 1845 6.214399 ACGCTCTTATATTTCTTTACGGAGG 58.786 40.000 0.00 0.00 0.00 4.30
1676 1846 7.695869 AACGCTCTTATATTTCTTTACGGAG 57.304 36.000 0.00 0.00 0.00 4.63
1677 1847 7.864379 CCTAACGCTCTTATATTTCTTTACGGA 59.136 37.037 0.00 0.00 0.00 4.69
1678 1848 7.115947 CCCTAACGCTCTTATATTTCTTTACGG 59.884 40.741 0.00 0.00 0.00 4.02
1679 1849 7.864379 TCCCTAACGCTCTTATATTTCTTTACG 59.136 37.037 0.00 0.00 0.00 3.18
1680 1850 9.194271 CTCCCTAACGCTCTTATATTTCTTTAC 57.806 37.037 0.00 0.00 0.00 2.01
1681 1851 8.921205 ACTCCCTAACGCTCTTATATTTCTTTA 58.079 33.333 0.00 0.00 0.00 1.85
1682 1852 7.793036 ACTCCCTAACGCTCTTATATTTCTTT 58.207 34.615 0.00 0.00 0.00 2.52
1683 1853 7.362802 ACTCCCTAACGCTCTTATATTTCTT 57.637 36.000 0.00 0.00 0.00 2.52
1684 1854 6.980416 ACTCCCTAACGCTCTTATATTTCT 57.020 37.500 0.00 0.00 0.00 2.52
1685 1855 7.655490 TGTACTCCCTAACGCTCTTATATTTC 58.345 38.462 0.00 0.00 0.00 2.17
1686 1856 7.592885 TGTACTCCCTAACGCTCTTATATTT 57.407 36.000 0.00 0.00 0.00 1.40
1687 1857 7.592885 TTGTACTCCCTAACGCTCTTATATT 57.407 36.000 0.00 0.00 0.00 1.28
1688 1858 7.592885 TTTGTACTCCCTAACGCTCTTATAT 57.407 36.000 0.00 0.00 0.00 0.86
1689 1859 7.260603 GTTTTGTACTCCCTAACGCTCTTATA 58.739 38.462 0.00 0.00 0.00 0.98
1690 1860 5.927281 TTTGTACTCCCTAACGCTCTTAT 57.073 39.130 0.00 0.00 0.00 1.73
1691 1861 5.473039 GTTTTGTACTCCCTAACGCTCTTA 58.527 41.667 0.00 0.00 0.00 2.10
1692 1862 4.313282 GTTTTGTACTCCCTAACGCTCTT 58.687 43.478 0.00 0.00 0.00 2.85
1693 1863 3.613432 CGTTTTGTACTCCCTAACGCTCT 60.613 47.826 0.00 0.00 35.76 4.09
1694 1864 2.665052 CGTTTTGTACTCCCTAACGCTC 59.335 50.000 0.00 0.00 35.76 5.03
1695 1865 2.297033 TCGTTTTGTACTCCCTAACGCT 59.703 45.455 0.00 0.00 40.79 5.07
1696 1866 2.409715 GTCGTTTTGTACTCCCTAACGC 59.590 50.000 0.00 0.00 40.79 4.84
1697 1867 3.426525 GTGTCGTTTTGTACTCCCTAACG 59.573 47.826 0.00 0.00 41.95 3.18
1698 1868 4.370917 TGTGTCGTTTTGTACTCCCTAAC 58.629 43.478 0.00 0.00 0.00 2.34
1699 1869 4.501915 CCTGTGTCGTTTTGTACTCCCTAA 60.502 45.833 0.00 0.00 0.00 2.69
1700 1870 3.006110 CCTGTGTCGTTTTGTACTCCCTA 59.994 47.826 0.00 0.00 0.00 3.53
1701 1871 2.224209 CCTGTGTCGTTTTGTACTCCCT 60.224 50.000 0.00 0.00 0.00 4.20
1702 1872 2.140717 CCTGTGTCGTTTTGTACTCCC 58.859 52.381 0.00 0.00 0.00 4.30
1703 1873 2.798847 GTCCTGTGTCGTTTTGTACTCC 59.201 50.000 0.00 0.00 0.00 3.85
1704 1874 3.450578 TGTCCTGTGTCGTTTTGTACTC 58.549 45.455 0.00 0.00 0.00 2.59
1705 1875 3.530265 TGTCCTGTGTCGTTTTGTACT 57.470 42.857 0.00 0.00 0.00 2.73
1731 1901 0.524414 GTAAACAACCGACATGCCCC 59.476 55.000 0.00 0.00 0.00 5.80
1776 1951 2.364972 AACCCAAGGTTGAAGGTCAG 57.635 50.000 0.00 0.00 45.07 3.51
1790 1965 3.558608 AATCTGAAATTCCCCAACCCA 57.441 42.857 0.00 0.00 0.00 4.51
1829 2004 3.380637 AGCAATTGAATGATGAGCCTGTC 59.619 43.478 10.34 0.00 0.00 3.51
1836 2011 8.035984 TGCAAATTAAGAGCAATTGAATGATGA 58.964 29.630 10.34 0.00 34.97 2.92
1837 2012 8.192068 TGCAAATTAAGAGCAATTGAATGATG 57.808 30.769 10.34 4.50 34.97 3.07
1838 2013 8.255206 TCTGCAAATTAAGAGCAATTGAATGAT 58.745 29.630 10.34 0.00 37.89 2.45
1845 2020 6.336842 AGTGTCTGCAAATTAAGAGCAATT 57.663 33.333 0.00 0.00 37.89 2.32
1868 2043 4.809673 CATCAGCTTGTGTACTGTCAGTA 58.190 43.478 8.70 8.70 35.37 2.74
1901 2076 5.598416 TGCTAATAGCTGTGTCATGTAGT 57.402 39.130 13.88 0.00 42.97 2.73
1935 2110 2.104111 TCGAAGTGGAGGTGTCATTGTT 59.896 45.455 0.00 0.00 0.00 2.83
1936 2111 1.691976 TCGAAGTGGAGGTGTCATTGT 59.308 47.619 0.00 0.00 0.00 2.71
1940 2115 0.959553 GAGTCGAAGTGGAGGTGTCA 59.040 55.000 0.00 0.00 0.00 3.58
1943 2118 0.169230 CTCGAGTCGAAGTGGAGGTG 59.831 60.000 17.27 0.00 34.74 4.00
1944 2119 0.961358 CCTCGAGTCGAAGTGGAGGT 60.961 60.000 17.27 0.00 39.51 3.85
1947 2122 0.323957 TCTCCTCGAGTCGAAGTGGA 59.676 55.000 17.27 17.70 34.74 4.02
1949 2124 2.420372 TGAATCTCCTCGAGTCGAAGTG 59.580 50.000 17.27 11.53 39.52 3.16
1951 2126 2.420372 TGTGAATCTCCTCGAGTCGAAG 59.580 50.000 17.27 10.98 39.52 3.79
1955 2130 4.109050 GTGAATGTGAATCTCCTCGAGTC 58.891 47.826 12.31 2.16 37.26 3.36
1963 2138 3.634397 TCCAGGGTGAATGTGAATCTC 57.366 47.619 0.00 0.00 0.00 2.75
1966 2141 3.696051 CGAAATCCAGGGTGAATGTGAAT 59.304 43.478 0.00 0.00 0.00 2.57
1967 2142 3.081061 CGAAATCCAGGGTGAATGTGAA 58.919 45.455 0.00 0.00 0.00 3.18
1968 2143 2.617788 CCGAAATCCAGGGTGAATGTGA 60.618 50.000 0.00 0.00 0.00 3.58
1969 2144 1.745087 CCGAAATCCAGGGTGAATGTG 59.255 52.381 0.00 0.00 0.00 3.21
1970 2145 1.633432 TCCGAAATCCAGGGTGAATGT 59.367 47.619 0.00 0.00 0.00 2.71
1971 2146 2.418368 TCCGAAATCCAGGGTGAATG 57.582 50.000 0.00 0.00 0.00 2.67
1980 2155 3.509575 CCCAAATGTTCTTCCGAAATCCA 59.490 43.478 0.00 0.00 0.00 3.41
1984 2159 3.556999 TCACCCAAATGTTCTTCCGAAA 58.443 40.909 0.00 0.00 0.00 3.46
1988 2163 4.937201 ACTTTCACCCAAATGTTCTTCC 57.063 40.909 0.00 0.00 0.00 3.46
1993 2168 5.105146 TGCACTAAACTTTCACCCAAATGTT 60.105 36.000 0.00 0.00 0.00 2.71
2006 2181 3.901844 TGGAGGTAGTCTGCACTAAACTT 59.098 43.478 0.00 0.00 38.96 2.66
2011 2186 1.825474 GCTTGGAGGTAGTCTGCACTA 59.175 52.381 0.00 0.00 43.62 2.74
2021 2196 1.778017 TTGCTGCCTGCTTGGAGGTA 61.778 55.000 9.82 4.51 43.37 3.08
2132 2307 5.551233 TCTTTAGTTTCCACCACAGAGATG 58.449 41.667 0.00 0.00 0.00 2.90
2144 2319 4.362932 GCTCCTTGCATCTTTAGTTTCC 57.637 45.455 0.00 0.00 42.31 3.13
2205 2380 3.544684 CACTTCCTGGTATGCTGCAATA 58.455 45.455 6.36 0.00 0.00 1.90
2273 2448 3.119291 CTGGATCCTCGTTCTGAAATCG 58.881 50.000 14.23 0.00 0.00 3.34
2279 2454 1.134580 ACATGCTGGATCCTCGTTCTG 60.135 52.381 14.23 5.77 0.00 3.02
2287 2463 2.286872 CTGTCTTCACATGCTGGATCC 58.713 52.381 4.20 4.20 0.00 3.36
2460 2636 7.011950 CGGTAGTTGGCAAAGAAATATCATGTA 59.988 37.037 0.00 0.00 0.00 2.29
2484 2660 1.156736 CAAACAAGAGGTACCAGCGG 58.843 55.000 15.94 3.32 0.00 5.52
2486 2662 1.798813 CGTCAAACAAGAGGTACCAGC 59.201 52.381 15.94 5.62 0.00 4.85
2528 2704 2.034305 CCATGCATTTAGGAGCTTCTGC 59.966 50.000 4.19 0.07 40.05 4.26
2557 2733 9.890352 GATACATCATCTGGATTTTTCTTTAGC 57.110 33.333 0.00 0.00 32.57 3.09
2578 2754 5.221823 TGTGAATGAGTTTGTCAGGGATACA 60.222 40.000 0.00 0.00 39.07 2.29
2611 2787 2.202797 CCATCCGTGGTCTCTGCG 60.203 66.667 0.00 0.00 40.83 5.18
2623 2799 5.069119 GTCTACATTCAAATTTCCCCCATCC 59.931 44.000 0.00 0.00 0.00 3.51
2667 2843 2.957402 ACCAGGCAGAACTTCATCAA 57.043 45.000 0.00 0.00 0.00 2.57
2736 2912 2.743928 GGCTGGAGTGAAGCACGG 60.744 66.667 0.00 0.00 42.69 4.94
2859 3035 3.931578 ACATCTTCACTAACTGCACTCC 58.068 45.455 0.00 0.00 0.00 3.85
2898 3074 2.643551 CGATGTTAGGCTGGGAAACAT 58.356 47.619 12.02 12.02 44.35 2.71
2944 3120 8.085296 AGAATAGCTTCTCTCATATGTTTACCG 58.915 37.037 1.90 0.00 37.09 4.02
3080 3256 1.338389 TGCCCTAAAGTTACGGTCTGC 60.338 52.381 0.00 0.00 0.00 4.26
3197 3373 4.618920 TTCCTAGCGGAAAGAAGTTTCT 57.381 40.909 0.00 0.00 46.11 2.52
3290 3466 1.833630 CCTCTGCAACCCATACTCTGA 59.166 52.381 0.00 0.00 0.00 3.27
3354 3530 7.125792 CTAAAGTTAGGATCAGCCCTTCTTA 57.874 40.000 0.00 0.00 37.74 2.10
3426 3602 3.881688 CTGAAATCCATGCTCCGAATTCT 59.118 43.478 3.52 0.00 0.00 2.40
3456 3632 5.221126 GCACCTTCATCAAATGGATAAGACC 60.221 44.000 0.00 0.00 33.95 3.85
3460 3636 6.211184 AGTTTGCACCTTCATCAAATGGATAA 59.789 34.615 0.00 0.00 33.95 1.75
3469 3645 4.644234 TGAAAGAAGTTTGCACCTTCATCA 59.356 37.500 21.33 20.18 40.62 3.07
3495 3671 1.365028 AGTTAGGGTCTGGCCTTCCTA 59.635 52.381 3.32 7.07 37.43 2.94
3496 3672 0.119358 AGTTAGGGTCTGGCCTTCCT 59.881 55.000 3.32 8.11 37.43 3.36
3497 3673 0.992695 AAGTTAGGGTCTGGCCTTCC 59.007 55.000 3.32 3.39 37.43 3.46
3498 3674 1.628846 TGAAGTTAGGGTCTGGCCTTC 59.371 52.381 3.32 0.00 37.43 3.46
3499 3675 1.630878 CTGAAGTTAGGGTCTGGCCTT 59.369 52.381 3.32 0.00 37.43 4.35
3500 3676 1.280457 CTGAAGTTAGGGTCTGGCCT 58.720 55.000 3.32 0.00 37.43 5.19
3501 3677 0.253327 CCTGAAGTTAGGGTCTGGCC 59.747 60.000 0.00 0.00 34.06 5.36
3502 3678 3.863407 CCTGAAGTTAGGGTCTGGC 57.137 57.895 0.00 0.00 34.06 4.85
3509 3685 0.693049 ACACCTGCCCTGAAGTTAGG 59.307 55.000 0.00 0.00 37.59 2.69
3510 3686 2.427506 GAACACCTGCCCTGAAGTTAG 58.572 52.381 0.00 0.00 0.00 2.34
3511 3687 1.270625 CGAACACCTGCCCTGAAGTTA 60.271 52.381 0.00 0.00 0.00 2.24
3512 3688 0.535102 CGAACACCTGCCCTGAAGTT 60.535 55.000 0.00 0.00 0.00 2.66
3513 3689 1.071471 CGAACACCTGCCCTGAAGT 59.929 57.895 0.00 0.00 0.00 3.01
3514 3690 0.951040 GACGAACACCTGCCCTGAAG 60.951 60.000 0.00 0.00 0.00 3.02
3515 3691 1.070786 GACGAACACCTGCCCTGAA 59.929 57.895 0.00 0.00 0.00 3.02
3516 3692 2.137528 TGACGAACACCTGCCCTGA 61.138 57.895 0.00 0.00 0.00 3.86
3517 3693 1.961277 GTGACGAACACCTGCCCTG 60.961 63.158 0.00 0.00 43.05 4.45
3518 3694 2.426023 GTGACGAACACCTGCCCT 59.574 61.111 0.00 0.00 43.05 5.19
3526 3702 9.423061 CCATAGATATTCATATTGTGACGAACA 57.577 33.333 0.00 0.00 36.32 3.18
3527 3703 9.639601 TCCATAGATATTCATATTGTGACGAAC 57.360 33.333 0.00 0.00 36.32 3.95
3530 3706 9.807649 TGATCCATAGATATTCATATTGTGACG 57.192 33.333 0.00 0.00 32.00 4.35
3533 3709 9.053840 GCCTGATCCATAGATATTCATATTGTG 57.946 37.037 0.00 0.00 30.90 3.33
3534 3710 8.775151 TGCCTGATCCATAGATATTCATATTGT 58.225 33.333 0.00 0.00 30.90 2.71
3535 3711 9.053840 GTGCCTGATCCATAGATATTCATATTG 57.946 37.037 0.00 0.00 30.90 1.90
3536 3712 8.216423 GGTGCCTGATCCATAGATATTCATATT 58.784 37.037 0.00 0.00 30.90 1.28
3537 3713 7.349065 TGGTGCCTGATCCATAGATATTCATAT 59.651 37.037 0.00 0.00 30.90 1.78
3538 3714 6.673537 TGGTGCCTGATCCATAGATATTCATA 59.326 38.462 0.00 0.00 30.90 2.15
3539 3715 5.489997 TGGTGCCTGATCCATAGATATTCAT 59.510 40.000 0.00 0.00 30.90 2.57
3540 3716 4.845796 TGGTGCCTGATCCATAGATATTCA 59.154 41.667 0.00 0.00 30.90 2.57
3541 3717 5.426689 TGGTGCCTGATCCATAGATATTC 57.573 43.478 0.00 0.00 30.90 1.75
3542 3718 5.339778 CCATGGTGCCTGATCCATAGATATT 60.340 44.000 2.57 0.00 41.79 1.28
3543 3719 4.165565 CCATGGTGCCTGATCCATAGATAT 59.834 45.833 2.57 0.00 41.79 1.63
3544 3720 3.520721 CCATGGTGCCTGATCCATAGATA 59.479 47.826 2.57 0.00 41.79 1.98
3545 3721 2.307980 CCATGGTGCCTGATCCATAGAT 59.692 50.000 2.57 0.00 41.79 1.98
3546 3722 1.701292 CCATGGTGCCTGATCCATAGA 59.299 52.381 2.57 0.00 41.79 1.98
3547 3723 1.271762 CCCATGGTGCCTGATCCATAG 60.272 57.143 11.73 0.00 41.79 2.23
3548 3724 0.773014 CCCATGGTGCCTGATCCATA 59.227 55.000 11.73 0.00 41.79 2.74
3549 3725 1.540166 CCCATGGTGCCTGATCCAT 59.460 57.895 11.73 0.00 44.15 3.41
3550 3726 2.692824 CCCCATGGTGCCTGATCCA 61.693 63.158 11.73 0.00 38.14 3.41
3551 3727 1.936767 TTCCCCATGGTGCCTGATCC 61.937 60.000 11.73 0.00 0.00 3.36
3552 3728 0.753111 GTTCCCCATGGTGCCTGATC 60.753 60.000 11.73 0.00 0.00 2.92
3553 3729 1.217057 AGTTCCCCATGGTGCCTGAT 61.217 55.000 11.73 0.00 0.00 2.90
3554 3730 1.852157 AGTTCCCCATGGTGCCTGA 60.852 57.895 11.73 0.00 0.00 3.86
3555 3731 1.379044 GAGTTCCCCATGGTGCCTG 60.379 63.158 11.73 0.00 0.00 4.85
3556 3732 1.852157 TGAGTTCCCCATGGTGCCT 60.852 57.895 11.73 0.28 0.00 4.75
3557 3733 1.379044 CTGAGTTCCCCATGGTGCC 60.379 63.158 11.73 0.00 0.00 5.01
3558 3734 0.393537 CTCTGAGTTCCCCATGGTGC 60.394 60.000 11.73 0.00 0.00 5.01
3559 3735 0.254178 CCTCTGAGTTCCCCATGGTG 59.746 60.000 11.73 0.00 0.00 4.17
3560 3736 0.119155 TCCTCTGAGTTCCCCATGGT 59.881 55.000 11.73 0.00 0.00 3.55
3561 3737 1.142465 CATCCTCTGAGTTCCCCATGG 59.858 57.143 4.14 4.14 0.00 3.66
3562 3738 1.142465 CCATCCTCTGAGTTCCCCATG 59.858 57.143 3.66 0.00 0.00 3.66
3563 3739 1.010046 TCCATCCTCTGAGTTCCCCAT 59.990 52.381 3.66 0.00 0.00 4.00
3564 3740 0.417437 TCCATCCTCTGAGTTCCCCA 59.583 55.000 3.66 0.00 0.00 4.96
3565 3741 1.813102 ATCCATCCTCTGAGTTCCCC 58.187 55.000 3.66 0.00 0.00 4.81
3566 3742 3.200825 TGAAATCCATCCTCTGAGTTCCC 59.799 47.826 3.66 0.00 35.37 3.97
3567 3743 4.163078 TCTGAAATCCATCCTCTGAGTTCC 59.837 45.833 3.66 0.00 35.37 3.62
3568 3744 5.350504 TCTGAAATCCATCCTCTGAGTTC 57.649 43.478 3.66 0.00 36.43 3.01
3569 3745 4.163839 CCTCTGAAATCCATCCTCTGAGTT 59.836 45.833 3.66 0.00 34.88 3.01
3570 3746 3.710677 CCTCTGAAATCCATCCTCTGAGT 59.289 47.826 3.66 0.00 34.88 3.41
3571 3747 3.966006 TCCTCTGAAATCCATCCTCTGAG 59.034 47.826 0.00 0.00 35.85 3.35
3572 3748 3.999603 TCCTCTGAAATCCATCCTCTGA 58.000 45.455 0.00 0.00 0.00 3.27
3573 3749 4.450053 GTTCCTCTGAAATCCATCCTCTG 58.550 47.826 0.00 0.00 30.79 3.35
3574 3750 3.457749 GGTTCCTCTGAAATCCATCCTCT 59.542 47.826 0.00 0.00 30.79 3.69
3575 3751 3.200825 TGGTTCCTCTGAAATCCATCCTC 59.799 47.826 0.00 0.00 30.79 3.71
3576 3752 3.192944 TGGTTCCTCTGAAATCCATCCT 58.807 45.455 0.00 0.00 30.79 3.24
3577 3753 3.054065 ACTGGTTCCTCTGAAATCCATCC 60.054 47.826 0.00 0.00 29.21 3.51
3578 3754 4.195416 GACTGGTTCCTCTGAAATCCATC 58.805 47.826 0.00 0.00 29.21 3.51
3579 3755 3.369892 CGACTGGTTCCTCTGAAATCCAT 60.370 47.826 0.00 0.00 29.21 3.41
3580 3756 2.028112 CGACTGGTTCCTCTGAAATCCA 60.028 50.000 0.00 0.00 30.79 3.41
3581 3757 2.028020 ACGACTGGTTCCTCTGAAATCC 60.028 50.000 0.00 0.00 30.79 3.01
3582 3758 3.320673 ACGACTGGTTCCTCTGAAATC 57.679 47.619 0.00 0.00 30.79 2.17
3583 3759 4.141914 GGATACGACTGGTTCCTCTGAAAT 60.142 45.833 0.00 0.00 30.79 2.17
3584 3760 3.194968 GGATACGACTGGTTCCTCTGAAA 59.805 47.826 0.00 0.00 30.79 2.69
3585 3761 2.758979 GGATACGACTGGTTCCTCTGAA 59.241 50.000 0.00 0.00 0.00 3.02
3586 3762 2.291346 TGGATACGACTGGTTCCTCTGA 60.291 50.000 0.00 0.00 42.51 3.27
3587 3763 2.100197 TGGATACGACTGGTTCCTCTG 58.900 52.381 0.00 0.00 42.51 3.35
3588 3764 2.526888 TGGATACGACTGGTTCCTCT 57.473 50.000 0.00 0.00 42.51 3.69
3589 3765 3.385111 AGAATGGATACGACTGGTTCCTC 59.615 47.826 0.00 0.00 42.51 3.71
3590 3766 3.375699 AGAATGGATACGACTGGTTCCT 58.624 45.455 0.00 0.00 42.51 3.36
3591 3767 3.821421 AGAATGGATACGACTGGTTCC 57.179 47.619 0.00 0.00 42.51 3.62
3592 3768 6.085555 TCATAGAATGGATACGACTGGTTC 57.914 41.667 0.00 0.00 42.51 3.62
3593 3769 6.463049 CCTTCATAGAATGGATACGACTGGTT 60.463 42.308 0.00 0.00 42.51 3.67
3594 3770 5.011125 CCTTCATAGAATGGATACGACTGGT 59.989 44.000 0.00 0.00 42.51 4.00
3595 3771 5.011125 ACCTTCATAGAATGGATACGACTGG 59.989 44.000 0.00 0.00 42.51 4.00
3596 3772 5.923114 CACCTTCATAGAATGGATACGACTG 59.077 44.000 0.00 0.00 42.51 3.51
3597 3773 5.833667 TCACCTTCATAGAATGGATACGACT 59.166 40.000 0.00 0.00 42.51 4.18
3598 3774 6.085555 TCACCTTCATAGAATGGATACGAC 57.914 41.667 0.00 0.00 42.51 4.34
3599 3775 6.724893 TTCACCTTCATAGAATGGATACGA 57.275 37.500 0.00 0.00 42.51 3.43
3600 3776 7.495934 AGTTTTCACCTTCATAGAATGGATACG 59.504 37.037 0.00 0.00 42.51 3.06
3601 3777 8.738645 AGTTTTCACCTTCATAGAATGGATAC 57.261 34.615 0.00 0.00 0.00 2.24
3602 3778 9.396022 GAAGTTTTCACCTTCATAGAATGGATA 57.604 33.333 0.00 0.00 38.53 2.59
3603 3779 8.112183 AGAAGTTTTCACCTTCATAGAATGGAT 58.888 33.333 0.00 0.00 40.62 3.41
3604 3780 7.461749 AGAAGTTTTCACCTTCATAGAATGGA 58.538 34.615 0.00 0.00 40.62 3.41
3605 3781 7.609532 AGAGAAGTTTTCACCTTCATAGAATGG 59.390 37.037 0.00 0.00 40.62 3.16
3606 3782 8.558973 AGAGAAGTTTTCACCTTCATAGAATG 57.441 34.615 0.00 0.00 40.62 2.67
3607 3783 8.378565 TGAGAGAAGTTTTCACCTTCATAGAAT 58.621 33.333 0.00 0.00 40.62 2.40
3608 3784 7.735917 TGAGAGAAGTTTTCACCTTCATAGAA 58.264 34.615 0.00 0.00 40.62 2.10
3609 3785 7.303182 TGAGAGAAGTTTTCACCTTCATAGA 57.697 36.000 0.00 0.00 40.62 1.98
3610 3786 6.091986 GCTGAGAGAAGTTTTCACCTTCATAG 59.908 42.308 0.00 0.00 40.62 2.23
3611 3787 5.934625 GCTGAGAGAAGTTTTCACCTTCATA 59.065 40.000 0.00 0.00 40.62 2.15
3612 3788 4.759183 GCTGAGAGAAGTTTTCACCTTCAT 59.241 41.667 0.00 0.00 40.62 2.57
3613 3789 4.130118 GCTGAGAGAAGTTTTCACCTTCA 58.870 43.478 0.00 0.00 40.62 3.02
3614 3790 4.384940 AGCTGAGAGAAGTTTTCACCTTC 58.615 43.478 0.00 0.00 38.87 3.46
3615 3791 4.429854 AGCTGAGAGAAGTTTTCACCTT 57.570 40.909 0.00 0.00 0.00 3.50
3616 3792 4.020662 CCTAGCTGAGAGAAGTTTTCACCT 60.021 45.833 0.00 0.00 0.00 4.00
3617 3793 4.021016 TCCTAGCTGAGAGAAGTTTTCACC 60.021 45.833 0.00 0.00 0.00 4.02
3618 3794 5.140747 TCCTAGCTGAGAGAAGTTTTCAC 57.859 43.478 0.00 0.00 0.00 3.18
3619 3795 5.279708 CCTTCCTAGCTGAGAGAAGTTTTCA 60.280 44.000 0.00 0.00 33.73 2.69
3620 3796 5.175127 CCTTCCTAGCTGAGAGAAGTTTTC 58.825 45.833 0.00 0.00 33.73 2.29
3621 3797 4.564613 GCCTTCCTAGCTGAGAGAAGTTTT 60.565 45.833 0.00 0.00 33.73 2.43
3622 3798 3.055458 GCCTTCCTAGCTGAGAGAAGTTT 60.055 47.826 0.00 0.00 33.73 2.66
3623 3799 2.499693 GCCTTCCTAGCTGAGAGAAGTT 59.500 50.000 0.00 0.00 33.73 2.66
3624 3800 2.107366 GCCTTCCTAGCTGAGAGAAGT 58.893 52.381 0.00 0.00 33.73 3.01
3625 3801 1.412343 GGCCTTCCTAGCTGAGAGAAG 59.588 57.143 0.00 3.24 34.61 2.85
3626 3802 1.273267 TGGCCTTCCTAGCTGAGAGAA 60.273 52.381 3.32 0.00 0.00 2.87
3627 3803 0.336392 TGGCCTTCCTAGCTGAGAGA 59.664 55.000 3.32 0.00 0.00 3.10
3628 3804 0.752054 CTGGCCTTCCTAGCTGAGAG 59.248 60.000 3.32 0.00 0.00 3.20
3629 3805 0.336392 TCTGGCCTTCCTAGCTGAGA 59.664 55.000 3.32 0.00 0.00 3.27
3630 3806 0.463620 GTCTGGCCTTCCTAGCTGAG 59.536 60.000 3.32 0.00 0.00 3.35
3631 3807 0.978146 GGTCTGGCCTTCCTAGCTGA 60.978 60.000 3.32 0.00 0.00 4.26
3632 3808 1.524482 GGTCTGGCCTTCCTAGCTG 59.476 63.158 3.32 0.00 0.00 4.24
3633 3809 1.690985 GGGTCTGGCCTTCCTAGCT 60.691 63.158 3.32 0.00 37.43 3.32
3634 3810 0.398664 TAGGGTCTGGCCTTCCTAGC 60.399 60.000 3.32 0.00 37.43 3.42
3635 3811 1.763545 GTTAGGGTCTGGCCTTCCTAG 59.236 57.143 3.32 0.00 37.43 3.02
3636 3812 1.365028 AGTTAGGGTCTGGCCTTCCTA 59.635 52.381 3.32 7.07 37.43 2.94
3681 3915 2.693069 CGCCTGATCCATAGATGTTCC 58.307 52.381 0.00 0.00 30.90 3.62
4041 5132 8.299570 GTTCTTTCTCCTGCATTTCATTCTTTA 58.700 33.333 0.00 0.00 0.00 1.85
4044 5135 5.106396 CGTTCTTTCTCCTGCATTTCATTCT 60.106 40.000 0.00 0.00 0.00 2.40
4045 5136 5.091431 CGTTCTTTCTCCTGCATTTCATTC 58.909 41.667 0.00 0.00 0.00 2.67
4328 5419 7.823799 TGTCACAGTTCTATATCTGCATTTTCA 59.176 33.333 0.00 0.00 35.37 2.69
4610 5703 7.767659 TGAAATCTCTCATAAGGATGTCAACAG 59.232 37.037 0.00 0.00 32.70 3.16
4663 5756 4.706035 ACCACAGGTTCGTTTATGTTACA 58.294 39.130 0.00 0.00 27.29 2.41
4780 5873 0.582005 GCACGTTCTCCAGTGTGTTC 59.418 55.000 0.00 0.00 40.26 3.18
4834 5927 4.790790 AGACCAGGTTCTTCCTTATTCCAT 59.209 41.667 0.00 0.00 45.67 3.41
5031 6124 4.406456 TGAGGAAAAATGGCAGTATGTGT 58.594 39.130 0.00 0.00 39.31 3.72
5121 6214 5.710984 CAGTGTAACAGGTCACTAGGTAAG 58.289 45.833 0.00 0.00 42.05 2.34
5131 6224 2.338500 GCTGTAGCAGTGTAACAGGTC 58.662 52.381 21.21 8.23 41.43 3.85
5144 6237 7.615582 TTTATATGCATCAATAGGCTGTAGC 57.384 36.000 0.19 0.00 41.14 3.58
5179 6272 0.911769 CCACCAGGACCTGCTTATCA 59.088 55.000 16.72 0.00 36.89 2.15
5193 6286 0.904649 ACATGCGAAGATCTCCACCA 59.095 50.000 0.00 0.00 0.00 4.17
5228 6321 3.918591 GCACTCAACATCATCTGCAAAAG 59.081 43.478 0.00 0.00 0.00 2.27
5520 6613 7.225784 TCCGTACAAGTTATAACTGTTGGTA 57.774 36.000 18.70 14.69 39.66 3.25
5585 6678 8.381387 GCGGTGACAAACAATTTTAAAAACTTA 58.619 29.630 4.44 0.00 0.00 2.24
5588 6681 5.960683 GGCGGTGACAAACAATTTTAAAAAC 59.039 36.000 4.44 0.00 0.00 2.43
5809 6903 3.488721 CGTACTCCGCAGCAATACTACTT 60.489 47.826 0.00 0.00 0.00 2.24
5833 6927 1.266718 CAGTTCAAACACATGGGACGG 59.733 52.381 0.00 0.00 0.00 4.79
5834 6928 1.334960 GCAGTTCAAACACATGGGACG 60.335 52.381 0.00 0.00 0.00 4.79
5872 6966 8.923270 TCCATACATGTTCTGTAGATCATAACA 58.077 33.333 2.30 0.00 43.44 2.41
5905 7000 4.362279 AGAAACATTGCACATGTCACAAC 58.638 39.130 11.92 1.63 0.00 3.32
5917 7012 7.367285 TCCTAAAACACACATAGAAACATTGC 58.633 34.615 0.00 0.00 0.00 3.56
5918 7013 8.567948 ACTCCTAAAACACACATAGAAACATTG 58.432 33.333 0.00 0.00 0.00 2.82
5989 7085 4.334203 TCGTTTGTGTGAACATAGCTTTGT 59.666 37.500 3.73 3.73 0.00 2.83
5999 7095 3.722123 CGCTATTCTCGTTTGTGTGAAC 58.278 45.455 0.00 0.00 0.00 3.18
6005 7101 2.351726 GGATTGCGCTATTCTCGTTTGT 59.648 45.455 9.73 0.00 0.00 2.83
6008 7104 2.309528 TGGATTGCGCTATTCTCGTT 57.690 45.000 9.73 0.00 0.00 3.85
6136 7232 7.396055 AGCTTTTGTCCATAGTTTAAATGGCTA 59.604 33.333 1.99 0.00 43.11 3.93
6148 7244 9.906660 TTATTTGTACAAAGCTTTTGTCCATAG 57.093 29.630 24.22 0.00 33.32 2.23
6182 7278 7.215696 TGAAATGAAAAACAAATGTGTCGAC 57.784 32.000 9.11 9.11 36.80 4.20
6219 7315 8.922676 CAGAATGAAAATGATGACCTTCAAAAG 58.077 33.333 0.00 0.00 39.69 2.27
6290 7386 9.503427 GAAATGATTTATAAAAGTGAACGGAGG 57.497 33.333 1.21 0.00 0.00 4.30
6315 7411 8.514594 CAAAATAGCCTATTTTCAGTTGTCTGA 58.485 33.333 17.44 0.00 44.20 3.27
6316 7412 7.274250 GCAAAATAGCCTATTTTCAGTTGTCTG 59.726 37.037 17.44 7.24 44.20 3.51
6317 7413 7.039784 TGCAAAATAGCCTATTTTCAGTTGTCT 60.040 33.333 17.44 0.00 44.20 3.41
6318 7414 7.062255 GTGCAAAATAGCCTATTTTCAGTTGTC 59.938 37.037 17.44 6.45 44.20 3.18
6319 7415 6.868339 GTGCAAAATAGCCTATTTTCAGTTGT 59.132 34.615 17.44 0.00 44.20 3.32
6320 7416 6.867816 TGTGCAAAATAGCCTATTTTCAGTTG 59.132 34.615 17.44 9.66 44.20 3.16
6321 7417 6.991938 TGTGCAAAATAGCCTATTTTCAGTT 58.008 32.000 17.44 0.00 44.20 3.16
6322 7418 6.588719 TGTGCAAAATAGCCTATTTTCAGT 57.411 33.333 17.44 0.00 44.20 3.41
6323 7419 7.546667 ACAATGTGCAAAATAGCCTATTTTCAG 59.453 33.333 17.44 10.18 44.20 3.02
6324 7420 7.385267 ACAATGTGCAAAATAGCCTATTTTCA 58.615 30.769 17.44 13.58 44.20 2.69
6325 7421 7.761249 AGACAATGTGCAAAATAGCCTATTTTC 59.239 33.333 17.44 13.19 44.20 2.29
6326 7422 7.546667 CAGACAATGTGCAAAATAGCCTATTTT 59.453 33.333 15.12 15.12 46.23 1.82
6327 7423 7.037438 CAGACAATGTGCAAAATAGCCTATTT 58.963 34.615 3.83 3.83 39.92 1.40
6328 7424 6.377996 TCAGACAATGTGCAAAATAGCCTATT 59.622 34.615 0.00 0.00 0.00 1.73
6329 7425 5.887598 TCAGACAATGTGCAAAATAGCCTAT 59.112 36.000 0.00 0.00 0.00 2.57
6330 7426 5.252547 TCAGACAATGTGCAAAATAGCCTA 58.747 37.500 0.00 0.00 0.00 3.93
6331 7427 4.081406 TCAGACAATGTGCAAAATAGCCT 58.919 39.130 0.00 0.00 0.00 4.58
6332 7428 4.439305 TCAGACAATGTGCAAAATAGCC 57.561 40.909 0.00 0.00 0.00 3.93
6333 7429 6.956299 ATTTCAGACAATGTGCAAAATAGC 57.044 33.333 0.00 0.00 0.00 2.97


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.