Multiple sequence alignment - TraesCS5A01G392100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G392100 chr5A 100.000 2618 0 0 1 2618 588417877 588415260 0.000000e+00 4835.0
1 TraesCS5A01G392100 chr5D 87.482 2037 140 45 233 2226 467702968 467701004 0.000000e+00 2242.0
2 TraesCS5A01G392100 chr5B 86.890 1884 121 47 384 2225 574724031 574722232 0.000000e+00 1995.0
3 TraesCS5A01G392100 chr5B 92.157 51 4 0 132 182 572978391 572978441 3.610000e-09 73.1
4 TraesCS5A01G392100 chr5B 91.837 49 4 0 185 233 640941866 640941914 4.680000e-08 69.4
5 TraesCS5A01G392100 chr4D 86.567 201 17 10 1976 2173 54382311 54382504 2.040000e-51 213.0
6 TraesCS5A01G392100 chr7B 86.294 197 21 6 1978 2171 24122684 24122491 2.640000e-50 209.0
7 TraesCS5A01G392100 chr6D 85.641 195 23 5 1981 2173 140093426 140093235 1.590000e-47 200.0
8 TraesCS5A01G392100 chr2A 85.204 196 22 7 1981 2173 706904788 706904597 7.390000e-46 195.0
9 TraesCS5A01G392100 chr1B 85.128 195 24 5 1980 2173 20741690 20741500 7.390000e-46 195.0
10 TraesCS5A01G392100 chr1B 82.883 111 8 7 135 234 604145214 604145104 3.590000e-14 89.8
11 TraesCS5A01G392100 chr4B 83.251 203 29 5 1974 2173 470723014 470723214 5.760000e-42 182.0
12 TraesCS5A01G392100 chr4A 83.333 150 22 3 2025 2173 157212001 157211854 4.540000e-28 135.0
13 TraesCS5A01G392100 chr1D 86.538 104 13 1 135 238 461147085 461147187 2.130000e-21 113.0
14 TraesCS5A01G392100 chr6A 84.348 115 7 7 135 238 100354502 100354388 4.610000e-18 102.0
15 TraesCS5A01G392100 chr6A 88.462 52 6 0 131 182 61042953 61043004 2.180000e-06 63.9
16 TraesCS5A01G392100 chr6B 83.621 116 6 8 135 238 333895497 333895383 2.140000e-16 97.1
17 TraesCS5A01G392100 chr6B 82.759 116 7 8 135 238 333822080 333821966 9.980000e-15 91.6
18 TraesCS5A01G392100 chr6B 81.250 112 10 7 135 235 197245666 197245555 2.160000e-11 80.5
19 TraesCS5A01G392100 chr3B 82.906 117 9 6 134 239 750136325 750136209 7.710000e-16 95.3
20 TraesCS5A01G392100 chrUn 82.143 112 9 3 135 235 62221043 62221154 4.640000e-13 86.1
21 TraesCS5A01G392100 chr3D 81.739 115 10 6 135 238 168186437 168186551 4.640000e-13 86.1
22 TraesCS5A01G392100 chr2B 90.566 53 5 0 130 182 785067417 785067469 1.300000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G392100 chr5A 588415260 588417877 2617 True 4835 4835 100.000 1 2618 1 chr5A.!!$R1 2617
1 TraesCS5A01G392100 chr5D 467701004 467702968 1964 True 2242 2242 87.482 233 2226 1 chr5D.!!$R1 1993
2 TraesCS5A01G392100 chr5B 574722232 574724031 1799 True 1995 1995 86.890 384 2225 1 chr5B.!!$R1 1841


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
69 70 0.033642 GATTGGGTCGGCTACTAGGC 59.966 60.0 0.0 0.0 37.44 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1638 1668 0.456221 ATCACTTCGGTAGAGTGGCG 59.544 55.0 4.62 0.0 34.6 5.69 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.828299 TTTCCCCGTAGAAAATAAGCATG 57.172 39.130 0.00 0.00 32.90 4.06
24 25 3.815809 TCCCCGTAGAAAATAAGCATGG 58.184 45.455 0.00 0.00 0.00 3.66
25 26 2.884639 CCCCGTAGAAAATAAGCATGGG 59.115 50.000 0.00 0.00 35.53 4.00
26 27 2.293399 CCCGTAGAAAATAAGCATGGGC 59.707 50.000 0.00 0.00 41.61 5.36
43 44 3.084579 CGCAGCAATCAGACGGTC 58.915 61.111 0.00 0.00 0.00 4.79
44 45 1.446792 CGCAGCAATCAGACGGTCT 60.447 57.895 4.45 4.45 0.00 3.85
45 46 1.416813 CGCAGCAATCAGACGGTCTC 61.417 60.000 7.89 0.00 0.00 3.36
46 47 0.390340 GCAGCAATCAGACGGTCTCA 60.390 55.000 7.89 0.00 0.00 3.27
47 48 1.354040 CAGCAATCAGACGGTCTCAC 58.646 55.000 7.89 0.00 0.00 3.51
48 49 0.969149 AGCAATCAGACGGTCTCACA 59.031 50.000 7.89 0.00 0.00 3.58
49 50 1.552337 AGCAATCAGACGGTCTCACAT 59.448 47.619 7.89 0.00 0.00 3.21
50 51 1.662629 GCAATCAGACGGTCTCACATG 59.337 52.381 7.89 6.54 0.00 3.21
51 52 2.675032 GCAATCAGACGGTCTCACATGA 60.675 50.000 7.89 3.54 0.00 3.07
52 53 3.790091 CAATCAGACGGTCTCACATGAT 58.210 45.455 7.89 5.87 0.00 2.45
53 54 4.186926 CAATCAGACGGTCTCACATGATT 58.813 43.478 7.89 11.53 37.76 2.57
54 55 3.236632 TCAGACGGTCTCACATGATTG 57.763 47.619 7.89 0.00 0.00 2.67
55 56 2.094026 TCAGACGGTCTCACATGATTGG 60.094 50.000 7.89 0.00 0.00 3.16
56 57 1.208052 AGACGGTCTCACATGATTGGG 59.792 52.381 4.45 0.00 0.00 4.12
57 58 0.984230 ACGGTCTCACATGATTGGGT 59.016 50.000 0.00 0.00 0.00 4.51
58 59 1.066143 ACGGTCTCACATGATTGGGTC 60.066 52.381 0.00 0.00 0.00 4.46
59 60 1.656652 GGTCTCACATGATTGGGTCG 58.343 55.000 0.00 0.00 0.00 4.79
60 61 1.656652 GTCTCACATGATTGGGTCGG 58.343 55.000 0.00 0.00 0.00 4.79
61 62 0.107703 TCTCACATGATTGGGTCGGC 60.108 55.000 0.00 0.00 0.00 5.54
62 63 0.107508 CTCACATGATTGGGTCGGCT 60.108 55.000 0.00 0.00 0.00 5.52
63 64 1.138859 CTCACATGATTGGGTCGGCTA 59.861 52.381 0.00 0.00 0.00 3.93
64 65 1.134521 TCACATGATTGGGTCGGCTAC 60.135 52.381 0.00 0.00 0.00 3.58
65 66 1.134401 CACATGATTGGGTCGGCTACT 60.134 52.381 0.00 0.00 0.00 2.57
66 67 2.102420 CACATGATTGGGTCGGCTACTA 59.898 50.000 0.00 0.00 0.00 1.82
67 68 2.365617 ACATGATTGGGTCGGCTACTAG 59.634 50.000 0.00 0.00 0.00 2.57
68 69 1.410004 TGATTGGGTCGGCTACTAGG 58.590 55.000 0.00 0.00 0.00 3.02
69 70 0.033642 GATTGGGTCGGCTACTAGGC 59.966 60.000 0.00 0.00 37.44 3.93
87 88 3.417601 GGCCGGCCGAATTTAGAC 58.582 61.111 33.60 6.87 0.00 2.59
88 89 2.184830 GGCCGGCCGAATTTAGACC 61.185 63.158 33.60 10.39 0.00 3.85
89 90 2.531376 GCCGGCCGAATTTAGACCG 61.531 63.158 30.73 6.52 43.44 4.79
90 91 1.142314 CCGGCCGAATTTAGACCGA 59.858 57.895 30.73 0.00 46.71 4.69
91 92 1.149964 CCGGCCGAATTTAGACCGAC 61.150 60.000 30.73 0.00 46.71 4.79
92 93 0.458889 CGGCCGAATTTAGACCGACA 60.459 55.000 24.07 0.00 46.71 4.35
93 94 1.004595 GGCCGAATTTAGACCGACAC 58.995 55.000 0.00 0.00 0.00 3.67
94 95 1.004595 GCCGAATTTAGACCGACACC 58.995 55.000 0.00 0.00 0.00 4.16
95 96 1.648504 CCGAATTTAGACCGACACCC 58.351 55.000 0.00 0.00 0.00 4.61
96 97 1.274596 CGAATTTAGACCGACACCCG 58.725 55.000 0.00 0.00 38.18 5.28
108 109 4.383602 CACCCGGCGCGTCAAAAG 62.384 66.667 12.89 0.00 0.00 2.27
109 110 4.922026 ACCCGGCGCGTCAAAAGT 62.922 61.111 12.89 0.00 0.00 2.66
110 111 4.084888 CCCGGCGCGTCAAAAGTC 62.085 66.667 12.89 0.00 0.00 3.01
111 112 3.342627 CCGGCGCGTCAAAAGTCA 61.343 61.111 12.89 0.00 0.00 3.41
112 113 2.629210 CGGCGCGTCAAAAGTCAA 59.371 55.556 12.89 0.00 0.00 3.18
113 114 1.010574 CGGCGCGTCAAAAGTCAAA 60.011 52.632 12.89 0.00 0.00 2.69
114 115 0.991770 CGGCGCGTCAAAAGTCAAAG 60.992 55.000 12.89 0.00 0.00 2.77
115 116 0.660300 GGCGCGTCAAAAGTCAAAGG 60.660 55.000 5.47 0.00 0.00 3.11
116 117 0.306533 GCGCGTCAAAAGTCAAAGGA 59.693 50.000 8.43 0.00 0.00 3.36
117 118 1.920272 GCGCGTCAAAAGTCAAAGGAC 60.920 52.381 8.43 0.00 44.66 3.85
118 119 1.333791 CGCGTCAAAAGTCAAAGGACC 60.334 52.381 0.00 0.00 45.48 4.46
119 120 1.001706 GCGTCAAAAGTCAAAGGACCC 60.002 52.381 0.00 0.00 45.48 4.46
120 121 2.572290 CGTCAAAAGTCAAAGGACCCT 58.428 47.619 0.00 0.00 45.48 4.34
121 122 2.290641 CGTCAAAAGTCAAAGGACCCTG 59.709 50.000 0.00 0.00 45.48 4.45
122 123 3.551846 GTCAAAAGTCAAAGGACCCTGA 58.448 45.455 0.00 0.00 45.48 3.86
123 124 4.145052 GTCAAAAGTCAAAGGACCCTGAT 58.855 43.478 0.00 0.00 45.48 2.90
124 125 5.313712 GTCAAAAGTCAAAGGACCCTGATA 58.686 41.667 0.00 0.00 45.48 2.15
125 126 5.768164 GTCAAAAGTCAAAGGACCCTGATAA 59.232 40.000 0.00 0.00 45.48 1.75
126 127 6.003950 TCAAAAGTCAAAGGACCCTGATAAG 58.996 40.000 0.00 0.00 45.48 1.73
127 128 5.584551 AAAGTCAAAGGACCCTGATAAGT 57.415 39.130 0.00 0.00 45.48 2.24
128 129 4.828072 AGTCAAAGGACCCTGATAAGTC 57.172 45.455 0.00 0.00 45.48 3.01
133 134 0.464452 GGACCCTGATAAGTCCCACG 59.536 60.000 0.00 0.00 45.76 4.94
134 135 1.192428 GACCCTGATAAGTCCCACGT 58.808 55.000 0.00 0.00 0.00 4.49
135 136 2.381911 GACCCTGATAAGTCCCACGTA 58.618 52.381 0.00 0.00 0.00 3.57
136 137 2.100418 GACCCTGATAAGTCCCACGTAC 59.900 54.545 0.00 0.00 0.00 3.67
137 138 2.292061 ACCCTGATAAGTCCCACGTACT 60.292 50.000 0.00 0.00 0.00 2.73
138 139 2.361438 CCCTGATAAGTCCCACGTACTC 59.639 54.545 0.00 0.00 0.00 2.59
139 140 2.361438 CCTGATAAGTCCCACGTACTCC 59.639 54.545 0.00 0.00 0.00 3.85
140 141 2.361438 CTGATAAGTCCCACGTACTCCC 59.639 54.545 0.00 0.00 0.00 4.30
141 142 2.024655 TGATAAGTCCCACGTACTCCCT 60.025 50.000 0.00 0.00 0.00 4.20
142 143 2.134789 TAAGTCCCACGTACTCCCTC 57.865 55.000 0.00 0.00 0.00 4.30
143 144 0.408700 AAGTCCCACGTACTCCCTCT 59.591 55.000 0.00 0.00 0.00 3.69
144 145 0.323542 AGTCCCACGTACTCCCTCTG 60.324 60.000 0.00 0.00 0.00 3.35
145 146 0.611340 GTCCCACGTACTCCCTCTGT 60.611 60.000 0.00 0.00 0.00 3.41
146 147 0.113776 TCCCACGTACTCCCTCTGTT 59.886 55.000 0.00 0.00 0.00 3.16
147 148 0.531200 CCCACGTACTCCCTCTGTTC 59.469 60.000 0.00 0.00 0.00 3.18
148 149 0.170561 CCACGTACTCCCTCTGTTCG 59.829 60.000 0.00 0.00 35.05 3.95
149 150 0.170561 CACGTACTCCCTCTGTTCGG 59.829 60.000 0.00 0.00 33.61 4.30
150 151 0.037303 ACGTACTCCCTCTGTTCGGA 59.963 55.000 0.00 0.00 33.61 4.55
151 152 1.171308 CGTACTCCCTCTGTTCGGAA 58.829 55.000 0.00 0.00 0.00 4.30
152 153 1.749634 CGTACTCCCTCTGTTCGGAAT 59.250 52.381 0.00 0.00 0.00 3.01
153 154 2.165845 CGTACTCCCTCTGTTCGGAATT 59.834 50.000 0.00 0.00 0.00 2.17
154 155 3.379372 CGTACTCCCTCTGTTCGGAATTA 59.621 47.826 0.00 0.00 0.00 1.40
155 156 3.889520 ACTCCCTCTGTTCGGAATTAC 57.110 47.619 0.00 0.00 0.00 1.89
156 157 3.442076 ACTCCCTCTGTTCGGAATTACT 58.558 45.455 0.00 0.00 0.00 2.24
157 158 3.838903 ACTCCCTCTGTTCGGAATTACTT 59.161 43.478 0.00 0.00 0.00 2.24
158 159 4.184629 CTCCCTCTGTTCGGAATTACTTG 58.815 47.826 0.00 0.00 0.00 3.16
159 160 3.581332 TCCCTCTGTTCGGAATTACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
160 161 4.041198 TCCCTCTGTTCGGAATTACTTGTT 59.959 41.667 0.00 0.00 0.00 2.83
161 162 4.760204 CCCTCTGTTCGGAATTACTTGTTT 59.240 41.667 0.00 0.00 0.00 2.83
162 163 5.106673 CCCTCTGTTCGGAATTACTTGTTTC 60.107 44.000 0.00 0.00 0.00 2.78
163 164 5.389516 CCTCTGTTCGGAATTACTTGTTTCG 60.390 44.000 0.00 0.00 0.00 3.46
164 165 5.291178 TCTGTTCGGAATTACTTGTTTCGA 58.709 37.500 0.00 0.00 0.00 3.71
165 166 5.754406 TCTGTTCGGAATTACTTGTTTCGAA 59.246 36.000 0.00 0.00 0.00 3.71
166 167 6.425721 TCTGTTCGGAATTACTTGTTTCGAAT 59.574 34.615 0.00 0.00 0.00 3.34
167 168 6.367421 TGTTCGGAATTACTTGTTTCGAATG 58.633 36.000 0.00 0.00 0.00 2.67
168 169 6.017770 TGTTCGGAATTACTTGTTTCGAATGT 60.018 34.615 0.00 0.00 0.00 2.71
169 170 5.922546 TCGGAATTACTTGTTTCGAATGTG 58.077 37.500 0.00 0.00 0.00 3.21
170 171 5.086058 CGGAATTACTTGTTTCGAATGTGG 58.914 41.667 0.00 0.00 0.00 4.17
171 172 5.106869 CGGAATTACTTGTTTCGAATGTGGA 60.107 40.000 0.00 0.00 0.00 4.02
172 173 6.403200 CGGAATTACTTGTTTCGAATGTGGAT 60.403 38.462 0.00 0.00 0.00 3.41
173 174 6.747280 GGAATTACTTGTTTCGAATGTGGATG 59.253 38.462 0.00 0.00 0.00 3.51
174 175 6.817765 ATTACTTGTTTCGAATGTGGATGT 57.182 33.333 0.00 0.00 0.00 3.06
175 176 7.915293 ATTACTTGTTTCGAATGTGGATGTA 57.085 32.000 0.00 0.00 0.00 2.29
176 177 7.915293 TTACTTGTTTCGAATGTGGATGTAT 57.085 32.000 0.00 0.00 0.00 2.29
177 178 6.422776 ACTTGTTTCGAATGTGGATGTATC 57.577 37.500 0.00 0.00 0.00 2.24
178 179 6.173339 ACTTGTTTCGAATGTGGATGTATCT 58.827 36.000 0.00 0.00 0.00 1.98
179 180 7.327975 ACTTGTTTCGAATGTGGATGTATCTA 58.672 34.615 0.00 0.00 0.00 1.98
180 181 7.492669 ACTTGTTTCGAATGTGGATGTATCTAG 59.507 37.037 0.00 0.00 0.00 2.43
181 182 7.107639 TGTTTCGAATGTGGATGTATCTAGA 57.892 36.000 0.00 0.00 0.00 2.43
182 183 7.552459 TGTTTCGAATGTGGATGTATCTAGAA 58.448 34.615 0.00 0.00 0.00 2.10
183 184 8.204160 TGTTTCGAATGTGGATGTATCTAGAAT 58.796 33.333 0.00 0.00 0.00 2.40
184 185 9.046296 GTTTCGAATGTGGATGTATCTAGAATT 57.954 33.333 0.00 0.00 0.00 2.17
221 222 7.760131 TTCTACAATAAGTAATTCCGAACGG 57.240 36.000 6.94 6.94 30.92 4.44
222 223 7.099266 TCTACAATAAGTAATTCCGAACGGA 57.901 36.000 12.04 12.04 35.82 4.69
223 224 7.198390 TCTACAATAAGTAATTCCGAACGGAG 58.802 38.462 15.34 3.62 37.68 4.63
224 225 5.114081 ACAATAAGTAATTCCGAACGGAGG 58.886 41.667 15.34 0.00 46.06 4.30
225 226 2.685850 AAGTAATTCCGAACGGAGGG 57.314 50.000 15.34 0.00 46.06 4.30
226 227 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
227 228 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
228 229 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
229 230 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
230 231 2.083628 ATTCCGAACGGAGGGAGTAT 57.916 50.000 15.34 3.38 46.06 2.12
231 232 1.856629 TTCCGAACGGAGGGAGTATT 58.143 50.000 15.34 0.00 46.06 1.89
281 282 3.743396 GTCCAAGAACTAGTGCTGAAGTG 59.257 47.826 3.42 0.00 0.00 3.16
282 283 2.481952 CCAAGAACTAGTGCTGAAGTGC 59.518 50.000 3.42 0.00 0.00 4.40
283 284 3.397482 CAAGAACTAGTGCTGAAGTGCT 58.603 45.455 3.42 0.00 32.67 4.40
284 285 3.760580 AGAACTAGTGCTGAAGTGCTT 57.239 42.857 1.28 0.00 25.96 3.91
285 286 4.873746 AGAACTAGTGCTGAAGTGCTTA 57.126 40.909 1.28 0.00 25.96 3.09
286 287 5.413309 AGAACTAGTGCTGAAGTGCTTAT 57.587 39.130 1.28 0.00 25.96 1.73
287 288 5.415221 AGAACTAGTGCTGAAGTGCTTATC 58.585 41.667 1.28 0.00 25.96 1.75
288 289 4.130286 ACTAGTGCTGAAGTGCTTATCC 57.870 45.455 0.00 0.00 0.00 2.59
289 290 3.515502 ACTAGTGCTGAAGTGCTTATCCA 59.484 43.478 0.00 0.00 0.00 3.41
290 291 3.423539 AGTGCTGAAGTGCTTATCCAA 57.576 42.857 0.00 0.00 0.00 3.53
291 292 3.960571 AGTGCTGAAGTGCTTATCCAAT 58.039 40.909 0.00 0.00 0.00 3.16
292 293 4.338879 AGTGCTGAAGTGCTTATCCAATT 58.661 39.130 0.00 0.00 0.00 2.32
293 294 4.397417 AGTGCTGAAGTGCTTATCCAATTC 59.603 41.667 0.00 0.00 39.50 2.17
294 295 4.156556 GTGCTGAAGTGCTTATCCAATTCA 59.843 41.667 5.18 5.18 44.48 2.57
304 305 7.385752 AGTGCTTATCCAATTCAAAACACATTG 59.614 33.333 0.00 0.00 0.00 2.82
311 312 5.007528 CCAATTCAAAACACATTGGACAACC 59.992 40.000 4.41 0.00 46.96 3.77
315 316 4.464244 TCAAAACACATTGGACAACCTGAA 59.536 37.500 0.00 0.00 37.04 3.02
319 320 4.277476 ACACATTGGACAACCTGAAAAGA 58.723 39.130 0.00 0.00 37.04 2.52
327 328 4.036852 GGACAACCTGAAAAGAGAAACTGG 59.963 45.833 0.00 0.00 0.00 4.00
335 336 0.321122 AAGAGAAACTGGCCGAGCAG 60.321 55.000 0.00 0.00 0.00 4.24
336 337 1.743252 GAGAAACTGGCCGAGCAGG 60.743 63.158 0.00 0.00 44.97 4.85
345 346 2.571757 CCGAGCAGGCGAACACTA 59.428 61.111 0.00 0.00 0.00 2.74
346 347 1.517257 CCGAGCAGGCGAACACTAG 60.517 63.158 0.00 0.00 0.00 2.57
347 348 2.161486 CGAGCAGGCGAACACTAGC 61.161 63.158 0.00 0.00 0.00 3.42
348 349 1.216710 GAGCAGGCGAACACTAGCT 59.783 57.895 0.00 0.00 34.61 3.32
349 350 0.390472 GAGCAGGCGAACACTAGCTT 60.390 55.000 0.00 0.00 31.61 3.74
350 351 0.671781 AGCAGGCGAACACTAGCTTG 60.672 55.000 0.00 0.00 42.35 4.01
351 352 1.639298 GCAGGCGAACACTAGCTTGG 61.639 60.000 0.00 0.00 40.24 3.61
476 479 1.812922 GCACAGCCGATCAGGTCAG 60.813 63.158 0.00 0.00 43.70 3.51
477 480 1.812922 CACAGCCGATCAGGTCAGC 60.813 63.158 0.00 0.00 43.70 4.26
499 503 7.340487 TCAGCAAGATAAGTCAGAGATAAGACA 59.660 37.037 0.00 0.00 37.23 3.41
504 508 8.988546 AGATAAGTCAGAGATAAGACAAGCTA 57.011 34.615 0.00 0.00 37.23 3.32
505 509 9.586732 AGATAAGTCAGAGATAAGACAAGCTAT 57.413 33.333 0.00 0.00 37.23 2.97
571 575 2.728318 CGATGATCCTTCGCACATACTG 59.272 50.000 2.68 0.00 0.00 2.74
573 577 1.482182 TGATCCTTCGCACATACTGCT 59.518 47.619 0.00 0.00 44.64 4.24
689 696 4.379243 CAGAGCCCGCCGTTCACT 62.379 66.667 0.00 0.00 0.00 3.41
690 697 3.626924 AGAGCCCGCCGTTCACTT 61.627 61.111 0.00 0.00 0.00 3.16
843 850 1.680860 CCGATCCAAACCCCACTAACC 60.681 57.143 0.00 0.00 0.00 2.85
863 870 2.089936 GCCGTGTTATCGTGTCGCA 61.090 57.895 0.00 0.00 0.00 5.10
864 871 1.418342 GCCGTGTTATCGTGTCGCAT 61.418 55.000 0.00 0.00 0.00 4.73
867 874 1.651631 CGTGTTATCGTGTCGCATCAA 59.348 47.619 0.00 0.00 0.00 2.57
926 934 6.519382 TCTTTGCATCGATCATCATACTTCT 58.481 36.000 0.00 0.00 0.00 2.85
945 953 0.686789 TAGTTCCAGAGCTGCAGCAA 59.313 50.000 38.24 21.74 45.16 3.91
958 966 1.871772 CAGCAAAGGTTGAGAGGCG 59.128 57.895 0.00 0.00 0.00 5.52
977 988 1.202510 CGAGGAGAAGCCAATCAGGAG 60.203 57.143 0.00 0.00 41.22 3.69
978 989 1.836802 GAGGAGAAGCCAATCAGGAGT 59.163 52.381 0.00 0.00 41.22 3.85
1056 1067 1.503542 CGTCCTGGCAGCATTTGTC 59.496 57.895 9.56 0.00 0.00 3.18
1257 1280 0.324460 CAGGGTCCGGGTCTTACTCT 60.324 60.000 0.00 0.00 0.00 3.24
1260 1283 1.328430 GGTCCGGGTCTTACTCTGGG 61.328 65.000 0.00 0.00 0.00 4.45
1263 1286 0.324460 CCGGGTCTTACTCTGGGTCT 60.324 60.000 0.00 0.00 0.00 3.85
1266 1289 1.196012 GGTCTTACTCTGGGTCTGGG 58.804 60.000 0.00 0.00 0.00 4.45
1270 1293 1.827969 CTTACTCTGGGTCTGGGTCTG 59.172 57.143 0.00 0.00 0.00 3.51
1271 1294 0.041238 TACTCTGGGTCTGGGTCTGG 59.959 60.000 0.00 0.00 0.00 3.86
1272 1295 1.992277 CTCTGGGTCTGGGTCTGGG 60.992 68.421 0.00 0.00 0.00 4.45
1273 1296 2.203998 CTGGGTCTGGGTCTGGGT 60.204 66.667 0.00 0.00 0.00 4.51
1274 1297 2.203938 TGGGTCTGGGTCTGGGTC 60.204 66.667 0.00 0.00 0.00 4.46
1275 1298 3.009714 GGGTCTGGGTCTGGGTCC 61.010 72.222 0.00 0.00 0.00 4.46
1305 1328 4.097361 GGCTCAGGTTCCGGGTCC 62.097 72.222 0.00 4.46 0.00 4.46
1317 1340 3.714001 GGGTCCGGGTCTTGGTCC 61.714 72.222 0.00 0.00 34.39 4.46
1347 1370 3.914551 AAGGTCGGGCTCTGGCTCT 62.915 63.158 0.00 0.00 36.65 4.09
1348 1371 4.154347 GGTCGGGCTCTGGCTCTG 62.154 72.222 0.00 0.00 36.65 3.35
1349 1372 4.154347 GTCGGGCTCTGGCTCTGG 62.154 72.222 0.00 0.00 36.65 3.86
1353 1376 3.397439 GGCTCTGGCTCTGGCTCA 61.397 66.667 0.00 0.00 38.73 4.26
1618 1641 3.818787 GCGGCCATGGCAAGTGAG 61.819 66.667 36.56 20.16 44.11 3.51
1619 1642 3.818787 CGGCCATGGCAAGTGAGC 61.819 66.667 36.56 17.19 44.11 4.26
1620 1643 2.677524 GGCCATGGCAAGTGAGCA 60.678 61.111 36.56 0.00 44.11 4.26
1621 1644 2.570181 GCCATGGCAAGTGAGCAC 59.430 61.111 32.08 0.00 41.49 4.40
1622 1645 2.872557 CCATGGCAAGTGAGCACG 59.127 61.111 0.00 0.00 35.83 5.34
1623 1646 2.177531 CATGGCAAGTGAGCACGC 59.822 61.111 0.00 0.00 35.83 5.34
1624 1647 2.033141 ATGGCAAGTGAGCACGCT 59.967 55.556 0.00 0.00 38.61 5.07
1627 1650 2.250485 GCAAGTGAGCACGCTGTG 59.750 61.111 0.00 4.61 36.93 3.66
1664 1694 5.864474 CCACTCTACCGAAGTGATATATTGC 59.136 44.000 4.89 0.00 35.75 3.56
1683 1721 4.837896 TGCGTGTGTTTAAAATGGATCA 57.162 36.364 0.00 0.00 0.00 2.92
1704 1746 5.754782 TCACCTCCATGCAGTTGTATAAAT 58.245 37.500 0.00 0.00 0.00 1.40
1739 1784 2.675844 CAGGTGGCGAACGATGAATAAA 59.324 45.455 0.00 0.00 0.00 1.40
1773 1818 7.849026 GTGTAATAGTGTGTATAATTTGCACCG 59.151 37.037 0.00 0.00 39.94 4.94
1820 1865 8.610248 TGAAGTTAACGAAGATTGGTTTGATA 57.390 30.769 0.00 0.00 31.50 2.15
1821 1866 9.226606 TGAAGTTAACGAAGATTGGTTTGATAT 57.773 29.630 0.00 0.00 31.50 1.63
1860 1905 8.697507 ACATCAATTCAAGACCTAAGTTCTTT 57.302 30.769 0.00 0.00 0.00 2.52
1861 1906 9.136323 ACATCAATTCAAGACCTAAGTTCTTTT 57.864 29.630 0.00 0.00 0.00 2.27
1862 1907 9.971922 CATCAATTCAAGACCTAAGTTCTTTTT 57.028 29.630 0.00 0.00 0.00 1.94
1912 1973 0.240945 CCACAAGTGCCGGATCAAAC 59.759 55.000 5.05 0.00 0.00 2.93
1922 1983 3.754323 TGCCGGATCAAACGAAAATAAGT 59.246 39.130 5.05 0.00 0.00 2.24
1946 2008 0.891373 TCTCTTGGAACAGAGCCTCG 59.109 55.000 0.00 0.00 42.39 4.63
1951 2013 4.070552 GAACAGAGCCTCGCCCGT 62.071 66.667 0.00 0.00 0.00 5.28
1967 2029 1.395262 CCCGTTTGCACAAACCAAAAC 59.605 47.619 18.01 0.00 45.78 2.43
1974 2036 1.402984 GCACAAACCAAAACACACGGA 60.403 47.619 0.00 0.00 0.00 4.69
1983 2045 2.202295 AAACACACGGATGTTGTTGC 57.798 45.000 7.25 0.00 42.01 4.17
1996 2058 5.696270 GGATGTTGTTGCATATCGTCTATCA 59.304 40.000 0.00 0.00 0.00 2.15
2066 2132 5.613358 AGCTTCGGTCTTTTATGACTTTG 57.387 39.130 0.00 0.00 37.16 2.77
2067 2133 4.083271 AGCTTCGGTCTTTTATGACTTTGC 60.083 41.667 0.00 0.00 37.16 3.68
2086 2158 2.158841 TGCTTTTTATCGGCGTGAGTTC 59.841 45.455 6.85 0.00 0.00 3.01
2096 2168 4.558178 TCGGCGTGAGTTCTTATTTGTTA 58.442 39.130 6.85 0.00 0.00 2.41
2099 2171 5.574055 CGGCGTGAGTTCTTATTTGTTAGTA 59.426 40.000 0.00 0.00 0.00 1.82
2120 2192 1.595311 TGATTGTGGGCATCCTACCT 58.405 50.000 0.00 0.00 0.00 3.08
2136 2208 0.031414 ACCTTATACAGAGGCCGGGT 60.031 55.000 2.18 0.00 37.84 5.28
2187 2259 1.340017 GCTTCAGGTTCTGGCATGGTA 60.340 52.381 0.00 0.00 31.51 3.25
2196 2268 3.558931 TCTGGCATGGTATTGTTCGAT 57.441 42.857 0.00 0.00 0.00 3.59
2209 2281 1.063492 TGTTCGATAGCTACCCTCCCA 60.063 52.381 0.00 0.00 0.00 4.37
2226 2298 1.283487 CAAACGGCGGTTTACCCAC 59.717 57.895 20.38 0.00 44.32 4.61
2227 2299 1.898094 AAACGGCGGTTTACCCACC 60.898 57.895 19.57 0.00 44.30 4.61
2228 2300 2.342073 AAACGGCGGTTTACCCACCT 62.342 55.000 19.57 0.00 44.30 4.00
2229 2301 2.744709 CGGCGGTTTACCCACCTG 60.745 66.667 0.00 0.00 34.22 4.00
2230 2302 2.360726 GGCGGTTTACCCACCTGG 60.361 66.667 0.00 0.00 41.37 4.45
2240 2312 4.415150 CCACCTGGGTCGCAGCAT 62.415 66.667 11.34 0.00 0.00 3.79
2241 2313 2.360350 CACCTGGGTCGCAGCATT 60.360 61.111 11.34 0.00 0.00 3.56
2242 2314 2.360350 ACCTGGGTCGCAGCATTG 60.360 61.111 11.34 0.80 0.00 2.82
2252 2324 2.471255 GCAGCATTGCCTTCGTACT 58.529 52.632 4.70 0.00 44.74 2.73
2253 2325 0.375106 GCAGCATTGCCTTCGTACTC 59.625 55.000 4.70 0.00 44.74 2.59
2254 2326 1.725641 CAGCATTGCCTTCGTACTCA 58.274 50.000 4.70 0.00 0.00 3.41
2255 2327 2.283298 CAGCATTGCCTTCGTACTCAT 58.717 47.619 4.70 0.00 0.00 2.90
2256 2328 2.286294 CAGCATTGCCTTCGTACTCATC 59.714 50.000 4.70 0.00 0.00 2.92
2257 2329 2.093500 AGCATTGCCTTCGTACTCATCA 60.093 45.455 4.70 0.00 0.00 3.07
2258 2330 2.874701 GCATTGCCTTCGTACTCATCAT 59.125 45.455 0.00 0.00 0.00 2.45
2259 2331 3.059325 GCATTGCCTTCGTACTCATCATC 60.059 47.826 0.00 0.00 0.00 2.92
2260 2332 3.885724 TTGCCTTCGTACTCATCATCA 57.114 42.857 0.00 0.00 0.00 3.07
2261 2333 3.165058 TGCCTTCGTACTCATCATCAC 57.835 47.619 0.00 0.00 0.00 3.06
2262 2334 2.120232 GCCTTCGTACTCATCATCACG 58.880 52.381 0.00 0.00 35.78 4.35
2263 2335 2.732366 CCTTCGTACTCATCATCACGG 58.268 52.381 0.00 0.00 35.21 4.94
2264 2336 2.120232 CTTCGTACTCATCATCACGGC 58.880 52.381 0.00 0.00 35.21 5.68
2265 2337 0.384309 TCGTACTCATCATCACGGCC 59.616 55.000 0.00 0.00 35.21 6.13
2266 2338 0.385751 CGTACTCATCATCACGGCCT 59.614 55.000 0.00 0.00 0.00 5.19
2267 2339 1.607148 CGTACTCATCATCACGGCCTA 59.393 52.381 0.00 0.00 0.00 3.93
2268 2340 2.604855 CGTACTCATCATCACGGCCTAC 60.605 54.545 0.00 0.00 0.00 3.18
2269 2341 1.485124 ACTCATCATCACGGCCTACA 58.515 50.000 0.00 0.00 0.00 2.74
2270 2342 1.831106 ACTCATCATCACGGCCTACAA 59.169 47.619 0.00 0.00 0.00 2.41
2271 2343 2.236146 ACTCATCATCACGGCCTACAAA 59.764 45.455 0.00 0.00 0.00 2.83
2272 2344 3.270027 CTCATCATCACGGCCTACAAAA 58.730 45.455 0.00 0.00 0.00 2.44
2273 2345 3.879295 CTCATCATCACGGCCTACAAAAT 59.121 43.478 0.00 0.00 0.00 1.82
2274 2346 4.269183 TCATCATCACGGCCTACAAAATT 58.731 39.130 0.00 0.00 0.00 1.82
2275 2347 4.704540 TCATCATCACGGCCTACAAAATTT 59.295 37.500 0.00 0.00 0.00 1.82
2276 2348 4.433186 TCATCACGGCCTACAAAATTTG 57.567 40.909 3.89 3.89 0.00 2.32
2277 2349 3.192422 TCATCACGGCCTACAAAATTTGG 59.808 43.478 10.71 0.00 34.12 3.28
2278 2350 2.865079 TCACGGCCTACAAAATTTGGA 58.135 42.857 10.71 0.00 34.12 3.53
2279 2351 3.223435 TCACGGCCTACAAAATTTGGAA 58.777 40.909 10.71 0.00 34.12 3.53
2280 2352 3.254657 TCACGGCCTACAAAATTTGGAAG 59.745 43.478 10.71 6.97 34.12 3.46
2281 2353 2.029380 ACGGCCTACAAAATTTGGAAGC 60.029 45.455 10.71 6.83 34.12 3.86
2282 2354 2.231235 CGGCCTACAAAATTTGGAAGCT 59.769 45.455 10.94 0.00 34.12 3.74
2283 2355 3.306019 CGGCCTACAAAATTTGGAAGCTT 60.306 43.478 10.94 0.00 34.12 3.74
2284 2356 4.245660 GGCCTACAAAATTTGGAAGCTTC 58.754 43.478 18.54 18.54 34.12 3.86
2285 2357 3.920412 GCCTACAAAATTTGGAAGCTTCG 59.080 43.478 19.91 6.30 34.12 3.79
2286 2358 3.920412 CCTACAAAATTTGGAAGCTTCGC 59.080 43.478 19.91 13.22 34.12 4.70
2287 2359 3.451141 ACAAAATTTGGAAGCTTCGCA 57.549 38.095 19.91 15.55 34.12 5.10
2288 2360 3.791245 ACAAAATTTGGAAGCTTCGCAA 58.209 36.364 19.91 19.94 34.12 4.85
2289 2361 3.555547 ACAAAATTTGGAAGCTTCGCAAC 59.444 39.130 22.26 10.59 34.12 4.17
2290 2362 3.451141 AAATTTGGAAGCTTCGCAACA 57.549 38.095 22.26 12.71 0.00 3.33
2291 2363 3.451141 AATTTGGAAGCTTCGCAACAA 57.549 38.095 22.26 16.88 0.00 2.83
2292 2364 2.202295 TTTGGAAGCTTCGCAACAAC 57.798 45.000 22.26 9.08 0.00 3.32
2293 2365 1.388547 TTGGAAGCTTCGCAACAACT 58.611 45.000 19.91 0.00 0.00 3.16
2294 2366 0.662619 TGGAAGCTTCGCAACAACTG 59.337 50.000 19.91 0.00 0.00 3.16
2295 2367 0.040067 GGAAGCTTCGCAACAACTGG 60.040 55.000 19.91 0.00 0.00 4.00
2296 2368 0.040067 GAAGCTTCGCAACAACTGGG 60.040 55.000 11.40 0.00 39.33 4.45
2297 2369 0.751643 AAGCTTCGCAACAACTGGGT 60.752 50.000 0.00 0.00 39.04 4.51
2298 2370 1.166531 AGCTTCGCAACAACTGGGTC 61.167 55.000 0.00 0.00 39.04 4.46
2299 2371 1.166531 GCTTCGCAACAACTGGGTCT 61.167 55.000 0.00 0.00 39.04 3.85
2300 2372 1.308998 CTTCGCAACAACTGGGTCTT 58.691 50.000 0.00 0.00 39.04 3.01
2301 2373 1.264288 CTTCGCAACAACTGGGTCTTC 59.736 52.381 0.00 0.00 39.04 2.87
2302 2374 0.179234 TCGCAACAACTGGGTCTTCA 59.821 50.000 0.00 0.00 39.04 3.02
2303 2375 1.021202 CGCAACAACTGGGTCTTCAA 58.979 50.000 0.00 0.00 33.35 2.69
2304 2376 1.268539 CGCAACAACTGGGTCTTCAAC 60.269 52.381 0.00 0.00 33.35 3.18
2305 2377 1.268539 GCAACAACTGGGTCTTCAACG 60.269 52.381 0.00 0.00 0.00 4.10
2306 2378 1.333619 CAACAACTGGGTCTTCAACGG 59.666 52.381 0.00 0.00 0.00 4.44
2307 2379 0.179029 ACAACTGGGTCTTCAACGGG 60.179 55.000 0.00 0.00 0.00 5.28
2308 2380 0.107831 CAACTGGGTCTTCAACGGGA 59.892 55.000 0.00 0.00 0.00 5.14
2309 2381 0.841289 AACTGGGTCTTCAACGGGAA 59.159 50.000 0.00 0.00 0.00 3.97
2318 2390 2.960819 CTTCAACGGGAAGTAGGTCTG 58.039 52.381 10.05 0.00 46.49 3.51
2319 2391 2.005370 TCAACGGGAAGTAGGTCTGT 57.995 50.000 0.00 0.00 0.00 3.41
2320 2392 3.159213 TCAACGGGAAGTAGGTCTGTA 57.841 47.619 0.00 0.00 0.00 2.74
2321 2393 3.499338 TCAACGGGAAGTAGGTCTGTAA 58.501 45.455 0.00 0.00 0.00 2.41
2322 2394 3.896888 TCAACGGGAAGTAGGTCTGTAAA 59.103 43.478 0.00 0.00 0.00 2.01
2323 2395 3.949842 ACGGGAAGTAGGTCTGTAAAC 57.050 47.619 0.00 0.00 0.00 2.01
2324 2396 2.229784 ACGGGAAGTAGGTCTGTAAACG 59.770 50.000 0.00 0.00 0.00 3.60
2325 2397 2.489329 CGGGAAGTAGGTCTGTAAACGA 59.511 50.000 0.00 0.00 0.00 3.85
2326 2398 3.427233 CGGGAAGTAGGTCTGTAAACGAG 60.427 52.174 0.00 0.00 0.00 4.18
2327 2399 3.509184 GGGAAGTAGGTCTGTAAACGAGT 59.491 47.826 0.00 0.00 0.00 4.18
2328 2400 4.380339 GGGAAGTAGGTCTGTAAACGAGTC 60.380 50.000 0.00 0.00 0.00 3.36
2329 2401 4.380339 GGAAGTAGGTCTGTAAACGAGTCC 60.380 50.000 0.00 0.00 0.00 3.85
2330 2402 3.759581 AGTAGGTCTGTAAACGAGTCCA 58.240 45.455 0.00 0.00 0.00 4.02
2331 2403 3.757493 AGTAGGTCTGTAAACGAGTCCAG 59.243 47.826 0.00 0.00 0.00 3.86
2332 2404 2.595238 AGGTCTGTAAACGAGTCCAGT 58.405 47.619 0.00 0.00 0.00 4.00
2333 2405 2.963782 AGGTCTGTAAACGAGTCCAGTT 59.036 45.455 0.00 0.00 0.00 3.16
2334 2406 3.005578 AGGTCTGTAAACGAGTCCAGTTC 59.994 47.826 0.00 0.00 0.00 3.01
2335 2407 2.978489 GTCTGTAAACGAGTCCAGTTCG 59.022 50.000 0.00 0.00 43.38 3.95
2336 2408 2.880268 TCTGTAAACGAGTCCAGTTCGA 59.120 45.455 1.31 0.00 40.36 3.71
2337 2409 3.316029 TCTGTAAACGAGTCCAGTTCGAA 59.684 43.478 0.00 0.00 40.36 3.71
2338 2410 4.022589 TCTGTAAACGAGTCCAGTTCGAAT 60.023 41.667 0.00 0.00 40.36 3.34
2339 2411 5.181811 TCTGTAAACGAGTCCAGTTCGAATA 59.818 40.000 0.00 0.00 40.36 1.75
2340 2412 5.771469 TGTAAACGAGTCCAGTTCGAATAA 58.229 37.500 0.00 0.00 40.36 1.40
2341 2413 5.860182 TGTAAACGAGTCCAGTTCGAATAAG 59.140 40.000 0.00 0.00 40.36 1.73
2342 2414 4.516365 AACGAGTCCAGTTCGAATAAGT 57.484 40.909 0.00 0.00 40.36 2.24
2343 2415 4.516365 ACGAGTCCAGTTCGAATAAGTT 57.484 40.909 0.00 0.00 40.36 2.66
2344 2416 4.235360 ACGAGTCCAGTTCGAATAAGTTG 58.765 43.478 0.00 0.00 40.36 3.16
2345 2417 3.612860 CGAGTCCAGTTCGAATAAGTTGG 59.387 47.826 0.00 5.31 40.36 3.77
2346 2418 4.617530 CGAGTCCAGTTCGAATAAGTTGGA 60.618 45.833 0.00 7.57 40.36 3.53
2347 2419 5.420409 GAGTCCAGTTCGAATAAGTTGGAT 58.580 41.667 16.07 9.15 37.10 3.41
2348 2420 5.805728 AGTCCAGTTCGAATAAGTTGGATT 58.194 37.500 16.07 11.74 37.10 3.01
2349 2421 6.942976 AGTCCAGTTCGAATAAGTTGGATTA 58.057 36.000 16.07 0.00 37.10 1.75
2350 2422 7.042335 AGTCCAGTTCGAATAAGTTGGATTAG 58.958 38.462 16.07 0.00 37.10 1.73
2351 2423 7.039882 GTCCAGTTCGAATAAGTTGGATTAGA 58.960 38.462 16.07 0.00 37.10 2.10
2352 2424 7.010275 GTCCAGTTCGAATAAGTTGGATTAGAC 59.990 40.741 16.07 5.66 37.10 2.59
2353 2425 7.042335 CCAGTTCGAATAAGTTGGATTAGACT 58.958 38.462 0.00 0.00 0.00 3.24
2354 2426 7.222999 CCAGTTCGAATAAGTTGGATTAGACTC 59.777 40.741 0.00 0.00 0.00 3.36
2355 2427 6.973474 AGTTCGAATAAGTTGGATTAGACTCG 59.027 38.462 0.00 0.00 0.00 4.18
2356 2428 5.828747 TCGAATAAGTTGGATTAGACTCGG 58.171 41.667 0.00 0.00 0.00 4.63
2357 2429 4.444720 CGAATAAGTTGGATTAGACTCGGC 59.555 45.833 0.00 0.00 0.00 5.54
2358 2430 5.602628 GAATAAGTTGGATTAGACTCGGCT 58.397 41.667 0.00 0.00 0.00 5.52
2359 2431 3.528597 AAGTTGGATTAGACTCGGCTC 57.471 47.619 0.00 0.00 0.00 4.70
2360 2432 2.457598 AGTTGGATTAGACTCGGCTCA 58.542 47.619 0.00 0.00 0.00 4.26
2361 2433 2.832129 AGTTGGATTAGACTCGGCTCAA 59.168 45.455 0.00 0.00 0.00 3.02
2362 2434 2.930682 GTTGGATTAGACTCGGCTCAAC 59.069 50.000 0.00 0.00 0.00 3.18
2363 2435 2.457598 TGGATTAGACTCGGCTCAACT 58.542 47.619 0.00 0.00 0.00 3.16
2364 2436 2.832129 TGGATTAGACTCGGCTCAACTT 59.168 45.455 0.00 0.00 0.00 2.66
2365 2437 4.021229 TGGATTAGACTCGGCTCAACTTA 58.979 43.478 0.00 0.00 0.00 2.24
2366 2438 4.649674 TGGATTAGACTCGGCTCAACTTAT 59.350 41.667 0.00 0.00 0.00 1.73
2367 2439 5.831525 TGGATTAGACTCGGCTCAACTTATA 59.168 40.000 0.00 0.00 0.00 0.98
2368 2440 6.493802 TGGATTAGACTCGGCTCAACTTATAT 59.506 38.462 0.00 0.00 0.00 0.86
2369 2441 7.015292 TGGATTAGACTCGGCTCAACTTATATT 59.985 37.037 0.00 0.00 0.00 1.28
2370 2442 8.521176 GGATTAGACTCGGCTCAACTTATATTA 58.479 37.037 0.00 0.00 0.00 0.98
2371 2443 9.909644 GATTAGACTCGGCTCAACTTATATTAA 57.090 33.333 0.00 0.00 0.00 1.40
2375 2447 9.614792 AGACTCGGCTCAACTTATATTAAAAAT 57.385 29.630 0.00 0.00 0.00 1.82
2399 2471 8.986477 ATTTAAAATTCAAGCGAGCATAAACT 57.014 26.923 0.00 0.00 0.00 2.66
2400 2472 7.795431 TTAAAATTCAAGCGAGCATAAACTG 57.205 32.000 0.00 0.00 0.00 3.16
2401 2473 5.627499 AAATTCAAGCGAGCATAAACTGA 57.373 34.783 0.00 0.00 0.00 3.41
2402 2474 4.871993 ATTCAAGCGAGCATAAACTGAG 57.128 40.909 0.00 0.00 0.00 3.35
2403 2475 3.319137 TCAAGCGAGCATAAACTGAGT 57.681 42.857 0.00 0.00 0.00 3.41
2404 2476 2.995939 TCAAGCGAGCATAAACTGAGTG 59.004 45.455 0.00 0.00 0.00 3.51
2405 2477 2.995939 CAAGCGAGCATAAACTGAGTGA 59.004 45.455 0.00 0.00 0.00 3.41
2406 2478 3.319137 AGCGAGCATAAACTGAGTGAA 57.681 42.857 0.00 0.00 0.00 3.18
2407 2479 3.257393 AGCGAGCATAAACTGAGTGAAG 58.743 45.455 0.00 0.00 0.00 3.02
2408 2480 2.222908 GCGAGCATAAACTGAGTGAAGC 60.223 50.000 0.00 0.00 0.00 3.86
2409 2481 3.257393 CGAGCATAAACTGAGTGAAGCT 58.743 45.455 2.46 2.46 0.00 3.74
2410 2482 3.681897 CGAGCATAAACTGAGTGAAGCTT 59.318 43.478 0.00 0.00 0.00 3.74
2411 2483 4.864806 CGAGCATAAACTGAGTGAAGCTTA 59.135 41.667 0.00 0.00 0.00 3.09
2412 2484 5.348724 CGAGCATAAACTGAGTGAAGCTTAA 59.651 40.000 0.00 0.00 0.00 1.85
2413 2485 6.128553 CGAGCATAAACTGAGTGAAGCTTAAA 60.129 38.462 0.00 0.00 0.00 1.52
2414 2486 7.138692 AGCATAAACTGAGTGAAGCTTAAAG 57.861 36.000 0.00 0.00 0.00 1.85
2415 2487 6.712547 AGCATAAACTGAGTGAAGCTTAAAGT 59.287 34.615 0.00 0.00 0.00 2.66
2416 2488 7.018235 GCATAAACTGAGTGAAGCTTAAAGTC 58.982 38.462 0.00 4.19 0.00 3.01
2417 2489 5.659048 AAACTGAGTGAAGCTTAAAGTCG 57.341 39.130 0.00 3.40 0.00 4.18
2418 2490 4.585955 ACTGAGTGAAGCTTAAAGTCGA 57.414 40.909 0.00 0.00 0.00 4.20
2419 2491 4.551388 ACTGAGTGAAGCTTAAAGTCGAG 58.449 43.478 0.00 6.65 0.00 4.04
2420 2492 3.318017 TGAGTGAAGCTTAAAGTCGAGC 58.682 45.455 0.00 0.00 39.17 5.03
2429 2501 6.229561 AGCTTAAAGTCGAGCTGTAAAAAG 57.770 37.500 0.00 0.00 46.82 2.27
2430 2502 5.758784 AGCTTAAAGTCGAGCTGTAAAAAGT 59.241 36.000 0.00 0.00 46.82 2.66
2431 2503 5.846473 GCTTAAAGTCGAGCTGTAAAAAGTG 59.154 40.000 0.00 0.00 36.01 3.16
2432 2504 6.292703 GCTTAAAGTCGAGCTGTAAAAAGTGA 60.293 38.462 0.00 0.00 36.01 3.41
2433 2505 5.405331 AAAGTCGAGCTGTAAAAAGTGAC 57.595 39.130 0.00 0.00 0.00 3.67
2434 2506 4.323553 AGTCGAGCTGTAAAAAGTGACT 57.676 40.909 0.00 0.00 0.00 3.41
2435 2507 4.299978 AGTCGAGCTGTAAAAAGTGACTC 58.700 43.478 0.00 0.00 30.06 3.36
2436 2508 3.119792 GTCGAGCTGTAAAAAGTGACTCG 59.880 47.826 0.00 0.00 45.02 4.18
2437 2509 3.050619 CGAGCTGTAAAAAGTGACTCGT 58.949 45.455 0.00 0.00 40.33 4.18
2438 2510 3.489785 CGAGCTGTAAAAAGTGACTCGTT 59.510 43.478 0.00 0.00 40.33 3.85
2439 2511 4.375105 CGAGCTGTAAAAAGTGACTCGTTC 60.375 45.833 0.00 0.00 40.33 3.95
2440 2512 4.694339 AGCTGTAAAAAGTGACTCGTTCT 58.306 39.130 0.00 0.00 0.00 3.01
2441 2513 4.745620 AGCTGTAAAAAGTGACTCGTTCTC 59.254 41.667 0.00 0.00 0.00 2.87
2442 2514 4.506654 GCTGTAAAAAGTGACTCGTTCTCA 59.493 41.667 0.00 0.00 0.00 3.27
2443 2515 5.332656 GCTGTAAAAAGTGACTCGTTCTCAG 60.333 44.000 0.00 0.00 0.00 3.35
2444 2516 5.657474 TGTAAAAAGTGACTCGTTCTCAGT 58.343 37.500 0.00 0.00 0.00 3.41
2445 2517 6.103997 TGTAAAAAGTGACTCGTTCTCAGTT 58.896 36.000 0.00 0.00 33.51 3.16
2446 2518 6.592607 TGTAAAAAGTGACTCGTTCTCAGTTT 59.407 34.615 0.00 6.69 41.18 2.66
2447 2519 5.470845 AAAAGTGACTCGTTCTCAGTTTG 57.529 39.130 10.97 0.00 39.38 2.93
2448 2520 3.802948 AGTGACTCGTTCTCAGTTTGT 57.197 42.857 0.00 0.00 0.00 2.83
2449 2521 4.913335 AGTGACTCGTTCTCAGTTTGTA 57.087 40.909 0.00 0.00 0.00 2.41
2450 2522 5.258456 AGTGACTCGTTCTCAGTTTGTAA 57.742 39.130 0.00 0.00 0.00 2.41
2451 2523 5.041940 AGTGACTCGTTCTCAGTTTGTAAC 58.958 41.667 0.00 0.00 0.00 2.50
2452 2524 4.802039 GTGACTCGTTCTCAGTTTGTAACA 59.198 41.667 0.00 0.00 0.00 2.41
2453 2525 5.290158 GTGACTCGTTCTCAGTTTGTAACAA 59.710 40.000 0.00 0.00 0.00 2.83
2454 2526 6.018994 GTGACTCGTTCTCAGTTTGTAACAAT 60.019 38.462 0.00 0.00 0.00 2.71
2455 2527 6.200286 TGACTCGTTCTCAGTTTGTAACAATC 59.800 38.462 0.00 0.00 0.00 2.67
2456 2528 6.281405 ACTCGTTCTCAGTTTGTAACAATCT 58.719 36.000 0.00 0.00 0.00 2.40
2457 2529 7.431249 ACTCGTTCTCAGTTTGTAACAATCTA 58.569 34.615 0.00 0.00 0.00 1.98
2458 2530 7.595502 ACTCGTTCTCAGTTTGTAACAATCTAG 59.404 37.037 0.00 0.00 0.00 2.43
2459 2531 7.654568 TCGTTCTCAGTTTGTAACAATCTAGA 58.345 34.615 0.00 0.00 0.00 2.43
2460 2532 7.808381 TCGTTCTCAGTTTGTAACAATCTAGAG 59.192 37.037 0.00 4.89 0.00 2.43
2461 2533 7.410942 CGTTCTCAGTTTGTAACAATCTAGAGC 60.411 40.741 0.00 1.38 0.00 4.09
2462 2534 7.233389 TCTCAGTTTGTAACAATCTAGAGCT 57.767 36.000 0.00 0.00 0.00 4.09
2463 2535 8.349568 TCTCAGTTTGTAACAATCTAGAGCTA 57.650 34.615 0.00 0.00 0.00 3.32
2464 2536 8.462811 TCTCAGTTTGTAACAATCTAGAGCTAG 58.537 37.037 0.00 0.00 34.56 3.42
2465 2537 8.349568 TCAGTTTGTAACAATCTAGAGCTAGA 57.650 34.615 9.47 9.47 45.24 2.43
2466 2538 8.803235 TCAGTTTGTAACAATCTAGAGCTAGAA 58.197 33.333 10.94 0.00 44.44 2.10
2467 2539 9.424319 CAGTTTGTAACAATCTAGAGCTAGAAA 57.576 33.333 10.94 0.00 44.44 2.52
2468 2540 9.998106 AGTTTGTAACAATCTAGAGCTAGAAAA 57.002 29.630 10.94 3.50 44.44 2.29
2470 2542 9.436957 TTTGTAACAATCTAGAGCTAGAAAAGG 57.563 33.333 10.94 4.54 44.44 3.11
2471 2543 8.362464 TGTAACAATCTAGAGCTAGAAAAGGA 57.638 34.615 10.94 0.00 44.44 3.36
2472 2544 8.982723 TGTAACAATCTAGAGCTAGAAAAGGAT 58.017 33.333 10.94 0.44 44.44 3.24
2473 2545 9.471084 GTAACAATCTAGAGCTAGAAAAGGATC 57.529 37.037 10.94 0.00 44.44 3.36
2474 2546 6.744112 ACAATCTAGAGCTAGAAAAGGATCG 58.256 40.000 10.94 0.00 44.44 3.69
2475 2547 6.547880 ACAATCTAGAGCTAGAAAAGGATCGA 59.452 38.462 10.94 0.00 44.44 3.59
2476 2548 6.569179 ATCTAGAGCTAGAAAAGGATCGAC 57.431 41.667 10.94 0.00 44.44 4.20
2477 2549 5.437946 TCTAGAGCTAGAAAAGGATCGACA 58.562 41.667 4.80 0.00 39.08 4.35
2478 2550 4.647424 AGAGCTAGAAAAGGATCGACAG 57.353 45.455 0.00 0.00 0.00 3.51
2479 2551 3.383185 AGAGCTAGAAAAGGATCGACAGG 59.617 47.826 0.00 0.00 0.00 4.00
2480 2552 2.432510 AGCTAGAAAAGGATCGACAGGG 59.567 50.000 0.00 0.00 0.00 4.45
2481 2553 2.431057 GCTAGAAAAGGATCGACAGGGA 59.569 50.000 0.00 0.00 0.00 4.20
2482 2554 3.491792 GCTAGAAAAGGATCGACAGGGAG 60.492 52.174 0.00 0.00 0.00 4.30
2483 2555 2.821437 AGAAAAGGATCGACAGGGAGA 58.179 47.619 0.00 0.00 0.00 3.71
2484 2556 3.173965 AGAAAAGGATCGACAGGGAGAA 58.826 45.455 0.00 0.00 0.00 2.87
2485 2557 3.196685 AGAAAAGGATCGACAGGGAGAAG 59.803 47.826 0.00 0.00 0.00 2.85
2486 2558 0.827368 AAGGATCGACAGGGAGAAGC 59.173 55.000 0.00 0.00 0.00 3.86
2487 2559 0.324738 AGGATCGACAGGGAGAAGCA 60.325 55.000 0.00 0.00 0.00 3.91
2488 2560 0.755686 GGATCGACAGGGAGAAGCAT 59.244 55.000 0.00 0.00 0.00 3.79
2489 2561 1.964223 GGATCGACAGGGAGAAGCATA 59.036 52.381 0.00 0.00 0.00 3.14
2490 2562 2.029470 GGATCGACAGGGAGAAGCATAG 60.029 54.545 0.00 0.00 0.00 2.23
2491 2563 0.747255 TCGACAGGGAGAAGCATAGC 59.253 55.000 0.00 0.00 0.00 2.97
2492 2564 0.749649 CGACAGGGAGAAGCATAGCT 59.250 55.000 0.00 0.00 42.56 3.32
2502 2574 2.901975 AGCATAGCTTGGAGACCGA 58.098 52.632 0.00 0.00 33.89 4.69
2503 2575 1.195115 AGCATAGCTTGGAGACCGAA 58.805 50.000 0.00 0.00 33.89 4.30
2504 2576 1.555075 AGCATAGCTTGGAGACCGAAA 59.445 47.619 0.00 0.00 33.89 3.46
2505 2577 1.936547 GCATAGCTTGGAGACCGAAAG 59.063 52.381 0.00 0.00 0.00 2.62
2517 2589 2.815647 CGAAAGGGTCCTCAGCGC 60.816 66.667 0.00 0.00 0.00 5.92
2518 2590 2.347490 GAAAGGGTCCTCAGCGCA 59.653 61.111 11.47 0.00 0.00 6.09
2519 2591 1.743252 GAAAGGGTCCTCAGCGCAG 60.743 63.158 11.47 0.00 0.00 5.18
2520 2592 3.259633 AAAGGGTCCTCAGCGCAGG 62.260 63.158 11.47 9.17 34.40 4.85
2522 2594 3.075005 GGGTCCTCAGCGCAGGTA 61.075 66.667 11.47 0.00 35.08 3.08
2523 2595 2.656069 GGGTCCTCAGCGCAGGTAA 61.656 63.158 11.47 0.00 35.08 2.85
2524 2596 1.153549 GGTCCTCAGCGCAGGTAAG 60.154 63.158 11.47 0.00 35.08 2.34
2525 2597 1.605058 GGTCCTCAGCGCAGGTAAGA 61.605 60.000 11.47 0.00 35.08 2.10
2526 2598 0.246635 GTCCTCAGCGCAGGTAAGAA 59.753 55.000 11.47 0.00 35.08 2.52
2527 2599 0.532573 TCCTCAGCGCAGGTAAGAAG 59.467 55.000 11.47 0.00 35.08 2.85
2528 2600 0.460987 CCTCAGCGCAGGTAAGAAGG 60.461 60.000 11.47 0.00 35.08 3.46
2529 2601 0.532573 CTCAGCGCAGGTAAGAAGGA 59.467 55.000 11.47 0.00 35.08 3.36
2530 2602 0.532573 TCAGCGCAGGTAAGAAGGAG 59.467 55.000 11.47 0.00 35.08 3.69
2531 2603 0.532573 CAGCGCAGGTAAGAAGGAGA 59.467 55.000 11.47 0.00 35.08 3.71
2532 2604 1.066858 CAGCGCAGGTAAGAAGGAGAA 60.067 52.381 11.47 0.00 35.08 2.87
2533 2605 1.834263 AGCGCAGGTAAGAAGGAGAAT 59.166 47.619 11.47 0.00 35.08 2.40
2534 2606 1.936547 GCGCAGGTAAGAAGGAGAATG 59.063 52.381 0.30 0.00 0.00 2.67
2535 2607 1.936547 CGCAGGTAAGAAGGAGAATGC 59.063 52.381 0.00 0.00 0.00 3.56
2536 2608 2.293170 GCAGGTAAGAAGGAGAATGCC 58.707 52.381 0.00 0.00 0.00 4.40
2537 2609 2.092699 GCAGGTAAGAAGGAGAATGCCT 60.093 50.000 0.00 0.00 40.93 4.75
2538 2610 3.539604 CAGGTAAGAAGGAGAATGCCTG 58.460 50.000 0.00 0.00 38.90 4.85
2539 2611 2.092699 AGGTAAGAAGGAGAATGCCTGC 60.093 50.000 0.00 0.00 38.58 4.85
2540 2612 2.356125 GGTAAGAAGGAGAATGCCTGCA 60.356 50.000 0.00 0.00 38.58 4.41
2541 2613 1.831580 AAGAAGGAGAATGCCTGCAC 58.168 50.000 0.00 0.00 38.58 4.57
2542 2614 0.990374 AGAAGGAGAATGCCTGCACT 59.010 50.000 0.00 0.00 38.58 4.40
2543 2615 1.093159 GAAGGAGAATGCCTGCACTG 58.907 55.000 0.00 0.00 38.58 3.66
2544 2616 0.694771 AAGGAGAATGCCTGCACTGA 59.305 50.000 0.00 0.00 38.58 3.41
2545 2617 0.694771 AGGAGAATGCCTGCACTGAA 59.305 50.000 0.00 0.00 36.76 3.02
2546 2618 1.284198 AGGAGAATGCCTGCACTGAAT 59.716 47.619 0.00 0.00 36.76 2.57
2547 2619 1.674962 GGAGAATGCCTGCACTGAATC 59.325 52.381 0.00 0.00 32.93 2.52
2548 2620 2.362736 GAGAATGCCTGCACTGAATCA 58.637 47.619 0.00 0.00 0.00 2.57
2549 2621 2.751259 GAGAATGCCTGCACTGAATCAA 59.249 45.455 0.00 0.00 0.00 2.57
2550 2622 2.490903 AGAATGCCTGCACTGAATCAAC 59.509 45.455 0.00 0.00 0.00 3.18
2551 2623 1.913778 ATGCCTGCACTGAATCAACA 58.086 45.000 0.00 0.00 0.00 3.33
2552 2624 0.953727 TGCCTGCACTGAATCAACAC 59.046 50.000 0.00 0.00 0.00 3.32
2553 2625 0.110056 GCCTGCACTGAATCAACACG 60.110 55.000 0.00 0.00 0.00 4.49
2554 2626 1.229428 CCTGCACTGAATCAACACGT 58.771 50.000 0.00 0.00 0.00 4.49
2555 2627 1.195448 CCTGCACTGAATCAACACGTC 59.805 52.381 0.00 0.00 0.00 4.34
2556 2628 2.138320 CTGCACTGAATCAACACGTCT 58.862 47.619 0.00 0.00 0.00 4.18
2557 2629 1.866601 TGCACTGAATCAACACGTCTG 59.133 47.619 0.00 0.00 0.00 3.51
2558 2630 2.135139 GCACTGAATCAACACGTCTGA 58.865 47.619 0.00 0.00 0.00 3.27
2559 2631 2.096713 GCACTGAATCAACACGTCTGAC 60.097 50.000 0.00 0.00 0.00 3.51
2561 2633 2.034179 ACTGAATCAACACGTCTGACGA 59.966 45.455 33.99 13.74 46.05 4.20
2562 2634 2.390938 TGAATCAACACGTCTGACGAC 58.609 47.619 33.99 14.77 46.05 4.34
2563 2635 2.223618 TGAATCAACACGTCTGACGACA 60.224 45.455 33.99 16.70 46.05 4.35
2564 2636 2.502213 ATCAACACGTCTGACGACAA 57.498 45.000 33.99 15.52 46.05 3.18
2565 2637 1.835121 TCAACACGTCTGACGACAAG 58.165 50.000 33.99 21.54 46.05 3.16
2566 2638 0.852777 CAACACGTCTGACGACAAGG 59.147 55.000 33.99 19.15 46.05 3.61
2567 2639 0.249322 AACACGTCTGACGACAAGGG 60.249 55.000 33.99 17.64 46.05 3.95
2568 2640 2.022129 CACGTCTGACGACAAGGGC 61.022 63.158 33.99 0.00 46.05 5.19
2569 2641 2.338620 CGTCTGACGACAAGGGCA 59.661 61.111 24.86 0.00 46.05 5.36
2570 2642 2.022129 CGTCTGACGACAAGGGCAC 61.022 63.158 24.86 0.00 46.05 5.01
2571 2643 2.022129 GTCTGACGACAAGGGCACG 61.022 63.158 0.00 0.00 39.98 5.34
2572 2644 3.414700 CTGACGACAAGGGCACGC 61.415 66.667 0.00 0.00 0.00 5.34
2573 2645 4.980805 TGACGACAAGGGCACGCC 62.981 66.667 0.00 0.00 0.00 5.68
2584 2656 3.573491 GCACGCCGTGGCCTAATC 61.573 66.667 20.07 0.00 37.98 1.75
2585 2657 2.125310 CACGCCGTGGCCTAATCA 60.125 61.111 9.90 0.00 37.98 2.57
2586 2658 2.125269 ACGCCGTGGCCTAATCAC 60.125 61.111 3.32 0.00 37.98 3.06
2587 2659 2.895372 CGCCGTGGCCTAATCACC 60.895 66.667 3.32 0.00 37.98 4.02
2588 2660 2.270850 GCCGTGGCCTAATCACCA 59.729 61.111 3.32 0.00 34.56 4.17
2589 2661 1.819632 GCCGTGGCCTAATCACCAG 60.820 63.158 3.32 0.00 36.38 4.00
2590 2662 1.819632 CCGTGGCCTAATCACCAGC 60.820 63.158 3.32 0.00 36.38 4.85
2591 2663 1.078497 CGTGGCCTAATCACCAGCA 60.078 57.895 3.32 0.00 36.38 4.41
2592 2664 1.091771 CGTGGCCTAATCACCAGCAG 61.092 60.000 3.32 0.00 36.38 4.24
2593 2665 1.077501 TGGCCTAATCACCAGCAGC 60.078 57.895 3.32 0.00 0.00 5.25
2594 2666 1.825622 GGCCTAATCACCAGCAGCC 60.826 63.158 0.00 0.00 0.00 4.85
2595 2667 1.825622 GCCTAATCACCAGCAGCCC 60.826 63.158 0.00 0.00 0.00 5.19
2596 2668 1.152881 CCTAATCACCAGCAGCCCC 60.153 63.158 0.00 0.00 0.00 5.80
2597 2669 1.609239 CTAATCACCAGCAGCCCCA 59.391 57.895 0.00 0.00 0.00 4.96
2598 2670 0.749454 CTAATCACCAGCAGCCCCAC 60.749 60.000 0.00 0.00 0.00 4.61
2599 2671 1.496444 TAATCACCAGCAGCCCCACA 61.496 55.000 0.00 0.00 0.00 4.17
2600 2672 3.574074 ATCACCAGCAGCCCCACAC 62.574 63.158 0.00 0.00 0.00 3.82
2601 2673 4.584518 CACCAGCAGCCCCACACA 62.585 66.667 0.00 0.00 0.00 3.72
2602 2674 3.583380 ACCAGCAGCCCCACACAT 61.583 61.111 0.00 0.00 0.00 3.21
2603 2675 2.753043 CCAGCAGCCCCACACATC 60.753 66.667 0.00 0.00 0.00 3.06
2604 2676 3.129502 CAGCAGCCCCACACATCG 61.130 66.667 0.00 0.00 0.00 3.84
2605 2677 4.415150 AGCAGCCCCACACATCGG 62.415 66.667 0.00 0.00 0.00 4.18
2610 2682 4.802051 CCCCACACATCGGCCCAG 62.802 72.222 0.00 0.00 0.00 4.45
2612 2684 4.415150 CCACACATCGGCCCAGCT 62.415 66.667 0.00 0.00 0.00 4.24
2613 2685 2.821366 CACACATCGGCCCAGCTC 60.821 66.667 0.00 0.00 0.00 4.09
2614 2686 4.101448 ACACATCGGCCCAGCTCC 62.101 66.667 0.00 0.00 0.00 4.70
2615 2687 4.100084 CACATCGGCCCAGCTCCA 62.100 66.667 0.00 0.00 0.00 3.86
2616 2688 3.092511 ACATCGGCCCAGCTCCAT 61.093 61.111 0.00 0.00 0.00 3.41
2617 2689 2.194056 CATCGGCCCAGCTCCATT 59.806 61.111 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.301805 CCATGCTTATTTTCTACGGGGAAAT 59.698 40.000 6.03 4.56 35.51 2.17
1 2 4.642885 CCATGCTTATTTTCTACGGGGAAA 59.357 41.667 1.82 1.82 33.98 3.13
2 3 4.204012 CCATGCTTATTTTCTACGGGGAA 58.796 43.478 0.00 0.00 0.00 3.97
3 4 3.434453 CCCATGCTTATTTTCTACGGGGA 60.434 47.826 0.00 0.00 33.64 4.81
4 5 2.884639 CCCATGCTTATTTTCTACGGGG 59.115 50.000 0.00 0.00 0.00 5.73
5 6 2.293399 GCCCATGCTTATTTTCTACGGG 59.707 50.000 0.00 0.00 33.53 5.28
6 7 2.032030 CGCCCATGCTTATTTTCTACGG 60.032 50.000 0.00 0.00 34.43 4.02
7 8 2.602217 GCGCCCATGCTTATTTTCTACG 60.602 50.000 0.00 0.00 34.43 3.51
8 9 2.357637 TGCGCCCATGCTTATTTTCTAC 59.642 45.455 4.18 0.00 35.36 2.59
9 10 2.618241 CTGCGCCCATGCTTATTTTCTA 59.382 45.455 4.18 0.00 35.36 2.10
10 11 1.406539 CTGCGCCCATGCTTATTTTCT 59.593 47.619 4.18 0.00 35.36 2.52
11 12 1.843992 CTGCGCCCATGCTTATTTTC 58.156 50.000 4.18 0.00 35.36 2.29
12 13 0.179103 GCTGCGCCCATGCTTATTTT 60.179 50.000 4.18 0.00 35.36 1.82
13 14 1.321805 TGCTGCGCCCATGCTTATTT 61.322 50.000 4.18 0.00 35.36 1.40
14 15 1.321805 TTGCTGCGCCCATGCTTATT 61.322 50.000 4.18 0.00 35.36 1.40
15 16 1.111116 ATTGCTGCGCCCATGCTTAT 61.111 50.000 4.18 0.18 35.36 1.73
16 17 1.727511 GATTGCTGCGCCCATGCTTA 61.728 55.000 4.18 0.00 35.36 3.09
17 18 3.072468 ATTGCTGCGCCCATGCTT 61.072 55.556 4.18 0.00 35.36 3.91
18 19 3.524606 GATTGCTGCGCCCATGCT 61.525 61.111 4.18 0.00 35.36 3.79
19 20 3.768185 CTGATTGCTGCGCCCATGC 62.768 63.158 4.18 4.78 0.00 4.06
20 21 2.116533 TCTGATTGCTGCGCCCATG 61.117 57.895 4.18 0.00 0.00 3.66
21 22 2.117156 GTCTGATTGCTGCGCCCAT 61.117 57.895 4.18 0.00 0.00 4.00
22 23 2.747460 GTCTGATTGCTGCGCCCA 60.747 61.111 4.18 0.00 0.00 5.36
23 24 3.869272 CGTCTGATTGCTGCGCCC 61.869 66.667 4.18 0.00 0.00 6.13
24 25 3.869272 CCGTCTGATTGCTGCGCC 61.869 66.667 4.18 0.00 0.00 6.53
25 26 3.088500 GACCGTCTGATTGCTGCGC 62.089 63.158 0.00 0.00 0.00 6.09
26 27 1.416813 GAGACCGTCTGATTGCTGCG 61.417 60.000 5.57 0.00 0.00 5.18
27 28 0.390340 TGAGACCGTCTGATTGCTGC 60.390 55.000 5.57 0.00 0.00 5.25
28 29 1.337167 TGTGAGACCGTCTGATTGCTG 60.337 52.381 5.57 0.00 0.00 4.41
29 30 0.969149 TGTGAGACCGTCTGATTGCT 59.031 50.000 5.57 0.00 0.00 3.91
30 31 1.662629 CATGTGAGACCGTCTGATTGC 59.337 52.381 5.57 0.00 0.00 3.56
31 32 3.236632 TCATGTGAGACCGTCTGATTG 57.763 47.619 5.57 0.43 0.00 2.67
32 33 4.186926 CAATCATGTGAGACCGTCTGATT 58.813 43.478 5.57 6.46 34.57 2.57
33 34 3.431346 CCAATCATGTGAGACCGTCTGAT 60.431 47.826 5.57 0.01 0.00 2.90
34 35 2.094026 CCAATCATGTGAGACCGTCTGA 60.094 50.000 5.57 0.00 0.00 3.27
35 36 2.274437 CCAATCATGTGAGACCGTCTG 58.726 52.381 5.57 0.00 0.00 3.51
36 37 1.208052 CCCAATCATGTGAGACCGTCT 59.792 52.381 0.00 0.00 0.00 4.18
37 38 1.066143 ACCCAATCATGTGAGACCGTC 60.066 52.381 0.00 0.00 0.00 4.79
38 39 0.984230 ACCCAATCATGTGAGACCGT 59.016 50.000 0.00 0.00 0.00 4.83
39 40 1.656652 GACCCAATCATGTGAGACCG 58.343 55.000 0.00 0.00 0.00 4.79
40 41 1.656652 CGACCCAATCATGTGAGACC 58.343 55.000 0.00 0.00 0.00 3.85
41 42 1.656652 CCGACCCAATCATGTGAGAC 58.343 55.000 0.00 0.00 0.00 3.36
42 43 0.107703 GCCGACCCAATCATGTGAGA 60.108 55.000 0.00 0.00 0.00 3.27
43 44 0.107508 AGCCGACCCAATCATGTGAG 60.108 55.000 0.00 0.00 0.00 3.51
44 45 1.134521 GTAGCCGACCCAATCATGTGA 60.135 52.381 0.00 0.00 0.00 3.58
45 46 1.134401 AGTAGCCGACCCAATCATGTG 60.134 52.381 0.00 0.00 0.00 3.21
46 47 1.204146 AGTAGCCGACCCAATCATGT 58.796 50.000 0.00 0.00 0.00 3.21
47 48 2.289072 CCTAGTAGCCGACCCAATCATG 60.289 54.545 0.00 0.00 0.00 3.07
48 49 1.971357 CCTAGTAGCCGACCCAATCAT 59.029 52.381 0.00 0.00 0.00 2.45
49 50 1.410004 CCTAGTAGCCGACCCAATCA 58.590 55.000 0.00 0.00 0.00 2.57
50 51 0.033642 GCCTAGTAGCCGACCCAATC 59.966 60.000 0.00 0.00 0.00 2.67
51 52 1.745320 CGCCTAGTAGCCGACCCAAT 61.745 60.000 0.00 0.00 0.00 3.16
52 53 2.420568 CGCCTAGTAGCCGACCCAA 61.421 63.158 0.00 0.00 0.00 4.12
53 54 2.831742 CGCCTAGTAGCCGACCCA 60.832 66.667 0.00 0.00 0.00 4.51
54 55 3.603671 CCGCCTAGTAGCCGACCC 61.604 72.222 1.38 0.00 0.00 4.46
55 56 4.281947 GCCGCCTAGTAGCCGACC 62.282 72.222 1.38 0.00 0.00 4.79
56 57 4.281947 GGCCGCCTAGTAGCCGAC 62.282 72.222 1.38 0.00 36.84 4.79
70 71 2.184830 GGTCTAAATTCGGCCGGCC 61.185 63.158 36.69 36.69 0.00 6.13
71 72 2.531376 CGGTCTAAATTCGGCCGGC 61.531 63.158 27.83 21.18 38.86 6.13
72 73 1.142314 TCGGTCTAAATTCGGCCGG 59.858 57.895 27.83 8.07 42.35 6.13
73 74 0.458889 TGTCGGTCTAAATTCGGCCG 60.459 55.000 22.12 22.12 43.32 6.13
74 75 1.004595 GTGTCGGTCTAAATTCGGCC 58.995 55.000 0.00 0.00 0.00 6.13
75 76 1.004595 GGTGTCGGTCTAAATTCGGC 58.995 55.000 0.00 0.00 0.00 5.54
76 77 1.648504 GGGTGTCGGTCTAAATTCGG 58.351 55.000 0.00 0.00 0.00 4.30
77 78 1.274596 CGGGTGTCGGTCTAAATTCG 58.725 55.000 0.00 0.00 34.75 3.34
91 92 4.383602 CTTTTGACGCGCCGGGTG 62.384 66.667 12.84 2.44 0.00 4.61
92 93 4.922026 ACTTTTGACGCGCCGGGT 62.922 61.111 6.48 6.48 0.00 5.28
93 94 4.084888 GACTTTTGACGCGCCGGG 62.085 66.667 5.73 0.00 0.00 5.73
94 95 2.381665 TTTGACTTTTGACGCGCCGG 62.382 55.000 5.73 0.00 0.00 6.13
95 96 0.991770 CTTTGACTTTTGACGCGCCG 60.992 55.000 5.73 0.00 0.00 6.46
96 97 0.660300 CCTTTGACTTTTGACGCGCC 60.660 55.000 5.73 0.00 0.00 6.53
97 98 0.306533 TCCTTTGACTTTTGACGCGC 59.693 50.000 5.73 0.00 0.00 6.86
98 99 1.333791 GGTCCTTTGACTTTTGACGCG 60.334 52.381 3.53 3.53 41.47 6.01
99 100 1.001706 GGGTCCTTTGACTTTTGACGC 60.002 52.381 0.00 0.00 41.47 5.19
100 101 2.290641 CAGGGTCCTTTGACTTTTGACG 59.709 50.000 0.00 0.00 41.47 4.35
101 102 3.551846 TCAGGGTCCTTTGACTTTTGAC 58.448 45.455 0.00 0.00 41.47 3.18
102 103 3.943671 TCAGGGTCCTTTGACTTTTGA 57.056 42.857 0.00 0.00 41.47 2.69
103 104 5.770162 ACTTATCAGGGTCCTTTGACTTTTG 59.230 40.000 0.00 0.00 41.47 2.44
104 105 5.953571 ACTTATCAGGGTCCTTTGACTTTT 58.046 37.500 0.00 0.00 41.47 2.27
105 106 5.515008 GGACTTATCAGGGTCCTTTGACTTT 60.515 44.000 5.04 0.00 45.99 2.66
106 107 4.019231 GGACTTATCAGGGTCCTTTGACTT 60.019 45.833 5.04 0.00 45.99 3.01
107 108 3.519913 GGACTTATCAGGGTCCTTTGACT 59.480 47.826 5.04 0.00 45.99 3.41
108 109 3.875125 GGACTTATCAGGGTCCTTTGAC 58.125 50.000 5.04 0.00 45.99 3.18
115 116 1.192428 ACGTGGGACTTATCAGGGTC 58.808 55.000 0.00 0.00 0.00 4.46
116 117 2.105766 GTACGTGGGACTTATCAGGGT 58.894 52.381 0.00 0.00 0.00 4.34
117 118 2.361438 GAGTACGTGGGACTTATCAGGG 59.639 54.545 0.00 0.00 0.00 4.45
118 119 2.361438 GGAGTACGTGGGACTTATCAGG 59.639 54.545 0.00 0.00 0.00 3.86
119 120 2.361438 GGGAGTACGTGGGACTTATCAG 59.639 54.545 0.00 0.00 0.00 2.90
120 121 2.024655 AGGGAGTACGTGGGACTTATCA 60.025 50.000 0.00 0.00 0.00 2.15
121 122 2.622470 GAGGGAGTACGTGGGACTTATC 59.378 54.545 0.00 0.00 0.00 1.75
122 123 2.244252 AGAGGGAGTACGTGGGACTTAT 59.756 50.000 0.00 0.00 0.00 1.73
123 124 1.637553 AGAGGGAGTACGTGGGACTTA 59.362 52.381 0.00 0.00 0.00 2.24
124 125 0.408700 AGAGGGAGTACGTGGGACTT 59.591 55.000 0.00 0.00 0.00 3.01
125 126 0.323542 CAGAGGGAGTACGTGGGACT 60.324 60.000 0.00 0.00 0.00 3.85
126 127 0.611340 ACAGAGGGAGTACGTGGGAC 60.611 60.000 0.00 0.00 0.00 4.46
127 128 0.113776 AACAGAGGGAGTACGTGGGA 59.886 55.000 0.00 0.00 0.00 4.37
128 129 0.531200 GAACAGAGGGAGTACGTGGG 59.469 60.000 0.00 0.00 0.00 4.61
129 130 0.170561 CGAACAGAGGGAGTACGTGG 59.829 60.000 0.00 0.00 0.00 4.94
130 131 0.170561 CCGAACAGAGGGAGTACGTG 59.829 60.000 0.00 0.00 0.00 4.49
131 132 0.037303 TCCGAACAGAGGGAGTACGT 59.963 55.000 0.00 0.00 0.00 3.57
132 133 1.171308 TTCCGAACAGAGGGAGTACG 58.829 55.000 0.00 0.00 33.01 3.67
133 134 3.889520 AATTCCGAACAGAGGGAGTAC 57.110 47.619 0.00 0.00 33.01 2.73
134 135 4.607239 AGTAATTCCGAACAGAGGGAGTA 58.393 43.478 0.00 0.00 33.01 2.59
135 136 3.442076 AGTAATTCCGAACAGAGGGAGT 58.558 45.455 0.00 0.00 33.01 3.85
136 137 4.184629 CAAGTAATTCCGAACAGAGGGAG 58.815 47.826 0.00 0.00 33.01 4.30
137 138 3.581332 ACAAGTAATTCCGAACAGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
138 139 3.939066 ACAAGTAATTCCGAACAGAGGG 58.061 45.455 0.00 0.00 0.00 4.30
139 140 5.389516 CGAAACAAGTAATTCCGAACAGAGG 60.390 44.000 0.00 0.00 0.00 3.69
140 141 5.404366 TCGAAACAAGTAATTCCGAACAGAG 59.596 40.000 0.00 0.00 0.00 3.35
141 142 5.291178 TCGAAACAAGTAATTCCGAACAGA 58.709 37.500 0.00 0.00 0.00 3.41
142 143 5.585500 TCGAAACAAGTAATTCCGAACAG 57.415 39.130 0.00 0.00 0.00 3.16
143 144 5.987777 TTCGAAACAAGTAATTCCGAACA 57.012 34.783 0.00 0.00 0.00 3.18
144 145 6.302313 CACATTCGAAACAAGTAATTCCGAAC 59.698 38.462 0.00 0.00 0.00 3.95
145 146 6.367421 CACATTCGAAACAAGTAATTCCGAA 58.633 36.000 0.00 0.00 0.00 4.30
146 147 5.106869 CCACATTCGAAACAAGTAATTCCGA 60.107 40.000 0.00 0.00 0.00 4.55
147 148 5.086058 CCACATTCGAAACAAGTAATTCCG 58.914 41.667 0.00 0.00 0.00 4.30
148 149 6.249035 TCCACATTCGAAACAAGTAATTCC 57.751 37.500 0.00 0.00 0.00 3.01
149 150 7.305474 ACATCCACATTCGAAACAAGTAATTC 58.695 34.615 0.00 0.00 0.00 2.17
150 151 7.214467 ACATCCACATTCGAAACAAGTAATT 57.786 32.000 0.00 0.00 0.00 1.40
151 152 6.817765 ACATCCACATTCGAAACAAGTAAT 57.182 33.333 0.00 0.00 0.00 1.89
152 153 7.822334 AGATACATCCACATTCGAAACAAGTAA 59.178 33.333 0.00 0.00 0.00 2.24
153 154 7.327975 AGATACATCCACATTCGAAACAAGTA 58.672 34.615 0.00 0.07 0.00 2.24
154 155 6.173339 AGATACATCCACATTCGAAACAAGT 58.827 36.000 0.00 0.00 0.00 3.16
155 156 6.668541 AGATACATCCACATTCGAAACAAG 57.331 37.500 0.00 0.00 0.00 3.16
156 157 7.552459 TCTAGATACATCCACATTCGAAACAA 58.448 34.615 0.00 0.00 0.00 2.83
157 158 7.107639 TCTAGATACATCCACATTCGAAACA 57.892 36.000 0.00 0.00 0.00 2.83
158 159 8.594881 ATTCTAGATACATCCACATTCGAAAC 57.405 34.615 0.00 0.00 0.00 2.78
195 196 8.823818 CCGTTCGGAATTACTTATTGTAGAAAT 58.176 33.333 5.19 0.00 32.08 2.17
196 197 8.034215 TCCGTTCGGAATTACTTATTGTAGAAA 58.966 33.333 11.66 0.00 32.08 2.52
197 198 7.546358 TCCGTTCGGAATTACTTATTGTAGAA 58.454 34.615 11.66 0.00 32.08 2.10
198 199 7.099266 TCCGTTCGGAATTACTTATTGTAGA 57.901 36.000 11.66 0.00 32.08 2.59
199 200 6.420008 CCTCCGTTCGGAATTACTTATTGTAG 59.580 42.308 14.79 0.00 33.41 2.74
200 201 6.275335 CCTCCGTTCGGAATTACTTATTGTA 58.725 40.000 14.79 0.00 33.41 2.41
201 202 5.114081 CCTCCGTTCGGAATTACTTATTGT 58.886 41.667 14.79 0.00 33.41 2.71
202 203 4.510340 CCCTCCGTTCGGAATTACTTATTG 59.490 45.833 14.79 0.00 33.41 1.90
203 204 4.406649 TCCCTCCGTTCGGAATTACTTATT 59.593 41.667 14.79 0.00 33.41 1.40
204 205 3.962718 TCCCTCCGTTCGGAATTACTTAT 59.037 43.478 14.79 0.00 33.41 1.73
205 206 3.364549 TCCCTCCGTTCGGAATTACTTA 58.635 45.455 14.79 0.00 33.41 2.24
206 207 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
207 208 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
208 209 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
209 210 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
210 211 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
211 212 2.083628 ATACTCCCTCCGTTCGGAAT 57.916 50.000 14.79 2.14 33.41 3.01
212 213 1.856629 AATACTCCCTCCGTTCGGAA 58.143 50.000 14.79 0.00 33.41 4.30
213 214 1.856629 AAATACTCCCTCCGTTCGGA 58.143 50.000 13.34 13.34 0.00 4.55
214 215 2.035576 CCTAAATACTCCCTCCGTTCGG 59.964 54.545 4.74 4.74 0.00 4.30
215 216 2.954318 TCCTAAATACTCCCTCCGTTCG 59.046 50.000 0.00 0.00 0.00 3.95
216 217 4.202233 CCTTCCTAAATACTCCCTCCGTTC 60.202 50.000 0.00 0.00 0.00 3.95
217 218 3.710165 CCTTCCTAAATACTCCCTCCGTT 59.290 47.826 0.00 0.00 0.00 4.44
218 219 3.306613 CCTTCCTAAATACTCCCTCCGT 58.693 50.000 0.00 0.00 0.00 4.69
219 220 2.037381 GCCTTCCTAAATACTCCCTCCG 59.963 54.545 0.00 0.00 0.00 4.63
220 221 3.046374 TGCCTTCCTAAATACTCCCTCC 58.954 50.000 0.00 0.00 0.00 4.30
221 222 4.772886 TTGCCTTCCTAAATACTCCCTC 57.227 45.455 0.00 0.00 0.00 4.30
222 223 4.625564 CGTTTGCCTTCCTAAATACTCCCT 60.626 45.833 0.00 0.00 0.00 4.20
223 224 3.626217 CGTTTGCCTTCCTAAATACTCCC 59.374 47.826 0.00 0.00 0.00 4.30
224 225 4.510571 TCGTTTGCCTTCCTAAATACTCC 58.489 43.478 0.00 0.00 0.00 3.85
225 226 6.679327 AATCGTTTGCCTTCCTAAATACTC 57.321 37.500 0.00 0.00 0.00 2.59
226 227 6.766467 CCTAATCGTTTGCCTTCCTAAATACT 59.234 38.462 0.00 0.00 0.00 2.12
227 228 6.764560 TCCTAATCGTTTGCCTTCCTAAATAC 59.235 38.462 0.00 0.00 0.00 1.89
228 229 6.764560 GTCCTAATCGTTTGCCTTCCTAAATA 59.235 38.462 0.00 0.00 0.00 1.40
229 230 5.589050 GTCCTAATCGTTTGCCTTCCTAAAT 59.411 40.000 0.00 0.00 0.00 1.40
230 231 4.939439 GTCCTAATCGTTTGCCTTCCTAAA 59.061 41.667 0.00 0.00 0.00 1.85
231 232 4.510571 GTCCTAATCGTTTGCCTTCCTAA 58.489 43.478 0.00 0.00 0.00 2.69
288 289 5.816777 AGGTTGTCCAATGTGTTTTGAATTG 59.183 36.000 0.00 0.00 35.89 2.32
289 290 5.816777 CAGGTTGTCCAATGTGTTTTGAATT 59.183 36.000 0.00 0.00 35.89 2.17
290 291 5.128499 TCAGGTTGTCCAATGTGTTTTGAAT 59.872 36.000 0.00 0.00 35.89 2.57
291 292 4.464244 TCAGGTTGTCCAATGTGTTTTGAA 59.536 37.500 0.00 0.00 35.89 2.69
292 293 4.019858 TCAGGTTGTCCAATGTGTTTTGA 58.980 39.130 0.00 0.00 35.89 2.69
293 294 4.383850 TCAGGTTGTCCAATGTGTTTTG 57.616 40.909 0.00 0.00 35.89 2.44
294 295 5.413309 TTTCAGGTTGTCCAATGTGTTTT 57.587 34.783 0.00 0.00 35.89 2.43
304 305 4.036852 CCAGTTTCTCTTTTCAGGTTGTCC 59.963 45.833 0.00 0.00 0.00 4.02
311 312 2.481952 CTCGGCCAGTTTCTCTTTTCAG 59.518 50.000 2.24 0.00 0.00 3.02
315 316 0.108585 TGCTCGGCCAGTTTCTCTTT 59.891 50.000 2.24 0.00 0.00 2.52
319 320 2.348998 CCTGCTCGGCCAGTTTCT 59.651 61.111 2.24 0.00 0.00 2.52
335 336 1.337447 TGTACCAAGCTAGTGTTCGCC 60.337 52.381 0.00 0.00 0.00 5.54
336 337 2.074547 TGTACCAAGCTAGTGTTCGC 57.925 50.000 0.00 0.00 0.00 4.70
337 338 4.056050 ACTTTGTACCAAGCTAGTGTTCG 58.944 43.478 6.61 0.00 0.00 3.95
339 340 4.141574 TGGACTTTGTACCAAGCTAGTGTT 60.142 41.667 6.61 0.00 32.93 3.32
340 341 3.389983 TGGACTTTGTACCAAGCTAGTGT 59.610 43.478 6.61 0.00 32.93 3.55
343 344 5.705441 TGATTTGGACTTTGTACCAAGCTAG 59.295 40.000 6.61 0.00 45.08 3.42
345 346 4.278419 GTGATTTGGACTTTGTACCAAGCT 59.722 41.667 6.61 0.00 45.08 3.74
346 347 4.546570 GTGATTTGGACTTTGTACCAAGC 58.453 43.478 6.61 0.56 45.08 4.01
347 348 4.320202 CGGTGATTTGGACTTTGTACCAAG 60.320 45.833 5.19 5.19 45.08 3.61
348 349 3.566322 CGGTGATTTGGACTTTGTACCAA 59.434 43.478 0.00 0.00 43.22 3.67
349 350 3.142951 CGGTGATTTGGACTTTGTACCA 58.857 45.455 0.00 0.00 0.00 3.25
350 351 2.095415 GCGGTGATTTGGACTTTGTACC 60.095 50.000 0.00 0.00 0.00 3.34
351 352 2.550606 TGCGGTGATTTGGACTTTGTAC 59.449 45.455 0.00 0.00 0.00 2.90
365 366 1.301716 GAAGGACTGCTTGCGGTGA 60.302 57.895 12.15 0.00 0.00 4.02
476 479 7.042791 GCTTGTCTTATCTCTGACTTATCTTGC 60.043 40.741 0.00 0.00 34.57 4.01
477 480 8.196771 AGCTTGTCTTATCTCTGACTTATCTTG 58.803 37.037 0.00 0.00 34.57 3.02
499 503 6.406692 TCGAGAAAGGCAGTATTATAGCTT 57.593 37.500 0.00 0.00 0.00 3.74
504 508 5.353394 TGGTTCGAGAAAGGCAGTATTAT 57.647 39.130 0.00 0.00 0.00 1.28
505 509 4.811969 TGGTTCGAGAAAGGCAGTATTA 57.188 40.909 0.00 0.00 0.00 0.98
506 510 3.695830 TGGTTCGAGAAAGGCAGTATT 57.304 42.857 0.00 0.00 0.00 1.89
571 575 3.916172 TGTTCGTACGTTCTGATTGTAGC 59.084 43.478 16.05 0.00 0.00 3.58
573 577 4.229096 GGTGTTCGTACGTTCTGATTGTA 58.771 43.478 16.05 0.00 0.00 2.41
650 654 2.663188 GAGTGCGCGGGGATCATC 60.663 66.667 8.83 0.00 0.00 2.92
651 655 4.592192 CGAGTGCGCGGGGATCAT 62.592 66.667 8.83 0.00 0.00 2.45
816 823 2.396157 GGTTTGGATCGGTGGCGAC 61.396 63.158 0.00 0.00 0.00 5.19
817 824 2.046700 GGTTTGGATCGGTGGCGA 60.047 61.111 0.00 0.00 0.00 5.54
843 850 2.502123 CGACACGATAACACGGCGG 61.502 63.158 13.24 2.35 37.61 6.13
863 870 5.126061 GGCGGAATTTATAGGATGCATTGAT 59.874 40.000 0.00 0.00 0.00 2.57
864 871 4.458989 GGCGGAATTTATAGGATGCATTGA 59.541 41.667 0.00 0.00 0.00 2.57
867 874 3.009723 CGGCGGAATTTATAGGATGCAT 58.990 45.455 0.00 0.00 0.00 3.96
893 901 2.564771 TCGATGCAAAGATGATGGGAC 58.435 47.619 0.00 0.00 0.00 4.46
899 907 6.461640 AGTATGATGATCGATGCAAAGATGA 58.538 36.000 0.54 4.46 0.00 2.92
926 934 0.686789 TTGCTGCAGCTCTGGAACTA 59.313 50.000 36.61 12.87 42.66 2.24
945 953 0.251832 TCTCCTCGCCTCTCAACCTT 60.252 55.000 0.00 0.00 0.00 3.50
958 966 1.836802 ACTCCTGATTGGCTTCTCCTC 59.163 52.381 0.00 0.00 35.26 3.71
1257 1280 2.203938 GACCCAGACCCAGACCCA 60.204 66.667 0.00 0.00 0.00 4.51
1260 1283 3.391382 CCGGACCCAGACCCAGAC 61.391 72.222 0.00 0.00 0.00 3.51
1281 1304 2.266055 GAACCTGAGCCTGACCCG 59.734 66.667 0.00 0.00 0.00 5.28
1305 1328 4.452733 GAGCCGGACCAAGACCCG 62.453 72.222 5.05 0.00 44.94 5.28
1317 1340 2.125350 GACCTTGAGCCTGAGCCG 60.125 66.667 0.00 0.00 41.25 5.52
1347 1370 2.149383 ACTTGACCCTGCTGAGCCA 61.149 57.895 0.23 0.00 0.00 4.75
1348 1371 1.673665 CACTTGACCCTGCTGAGCC 60.674 63.158 0.23 0.00 0.00 4.70
1349 1372 2.331132 GCACTTGACCCTGCTGAGC 61.331 63.158 0.00 0.00 0.00 4.26
1350 1373 0.954449 CTGCACTTGACCCTGCTGAG 60.954 60.000 0.00 0.00 35.06 3.35
1353 1376 2.433446 CCTGCACTTGACCCTGCT 59.567 61.111 0.00 0.00 34.29 4.24
1605 1628 2.872557 CGTGCTCACTTGCCATGG 59.127 61.111 7.63 7.63 0.00 3.66
1622 1645 2.020016 CGCGAACGCATACACAGC 59.980 61.111 18.69 0.00 42.06 4.40
1635 1665 3.047718 CTTCGGTAGAGTGGCGCGA 62.048 63.158 12.10 0.00 0.00 5.87
1638 1668 0.456221 ATCACTTCGGTAGAGTGGCG 59.544 55.000 4.62 0.00 34.60 5.69
1664 1694 5.371115 AGGTGATCCATTTTAAACACACG 57.629 39.130 0.00 0.00 35.89 4.49
1683 1721 8.766994 ATTTATTTATACAACTGCATGGAGGT 57.233 30.769 19.22 9.51 0.00 3.85
1704 1746 3.264104 GCCACCTGCGTACACTTATTTA 58.736 45.455 0.00 0.00 0.00 1.40
1717 1762 1.369091 ATTCATCGTTCGCCACCTGC 61.369 55.000 0.00 0.00 0.00 4.85
1718 1763 1.934589 TATTCATCGTTCGCCACCTG 58.065 50.000 0.00 0.00 0.00 4.00
1719 1764 2.684001 TTATTCATCGTTCGCCACCT 57.316 45.000 0.00 0.00 0.00 4.00
1739 1784 4.286297 ACACACTATTACACATGCCACT 57.714 40.909 0.00 0.00 0.00 4.00
1820 1865 9.645128 TTGAATTGATGTTGTCCTCCATATTAT 57.355 29.630 0.00 0.00 0.00 1.28
1821 1866 9.123902 CTTGAATTGATGTTGTCCTCCATATTA 57.876 33.333 0.00 0.00 0.00 0.98
1822 1867 7.835682 TCTTGAATTGATGTTGTCCTCCATATT 59.164 33.333 0.00 0.00 0.00 1.28
1866 1911 7.442969 TCGAAAGAACTTAGGTCTATTTGCAAA 59.557 33.333 15.44 15.44 37.03 3.68
1867 1912 6.932400 TCGAAAGAACTTAGGTCTATTTGCAA 59.068 34.615 0.00 0.00 37.03 4.08
1868 1913 6.367969 GTCGAAAGAACTTAGGTCTATTTGCA 59.632 38.462 0.00 0.00 45.01 4.08
1869 1914 6.183360 GGTCGAAAGAACTTAGGTCTATTTGC 60.183 42.308 0.00 0.00 46.67 3.68
1870 1915 7.292129 GGTCGAAAGAACTTAGGTCTATTTG 57.708 40.000 0.00 2.19 46.67 2.32
1889 1950 2.501223 GATCCGGCACTTGTGGTCGA 62.501 60.000 0.00 0.00 0.00 4.20
1912 1973 7.042051 TGTTCCAAGAGAGTCAACTTATTTTCG 60.042 37.037 0.00 0.00 0.00 3.46
1922 1983 2.037772 GGCTCTGTTCCAAGAGAGTCAA 59.962 50.000 12.05 0.00 46.72 3.18
1951 2013 2.476619 CGTGTGTTTTGGTTTGTGCAAA 59.523 40.909 0.00 0.00 0.00 3.68
1967 2029 3.683989 GATATGCAACAACATCCGTGTG 58.316 45.455 0.00 0.00 38.92 3.82
1974 2036 7.227314 ACAATGATAGACGATATGCAACAACAT 59.773 33.333 0.00 0.00 0.00 2.71
2029 2095 2.159184 CGAAGCTATGCCTTGACAGAGA 60.159 50.000 0.00 0.00 30.28 3.10
2066 2132 2.415512 AGAACTCACGCCGATAAAAAGC 59.584 45.455 0.00 0.00 0.00 3.51
2067 2133 4.663636 AAGAACTCACGCCGATAAAAAG 57.336 40.909 0.00 0.00 0.00 2.27
2086 2158 8.465999 TGCCCACAATCAATACTAACAAATAAG 58.534 33.333 0.00 0.00 0.00 1.73
2096 2168 3.959495 AGGATGCCCACAATCAATACT 57.041 42.857 0.00 0.00 33.88 2.12
2099 2171 2.515429 AGGTAGGATGCCCACAATCAAT 59.485 45.455 0.00 0.00 44.75 2.57
2109 2181 3.055747 GCCTCTGTATAAGGTAGGATGCC 60.056 52.174 0.00 0.00 43.53 4.40
2120 2192 2.572556 TGAAAACCCGGCCTCTGTATAA 59.427 45.455 0.00 0.00 0.00 0.98
2187 2259 2.633481 GGGAGGGTAGCTATCGAACAAT 59.367 50.000 0.00 0.00 0.00 2.71
2196 2268 1.619807 GCCGTTTGGGAGGGTAGCTA 61.620 60.000 0.00 0.00 38.47 3.32
2209 2281 3.748623 GTGGGTAAACCGCCGTTT 58.251 55.556 8.23 8.23 44.24 3.60
2226 2298 3.818787 GCAATGCTGCGACCCAGG 61.819 66.667 0.00 0.00 42.03 4.45
2235 2307 1.725641 TGAGTACGAAGGCAATGCTG 58.274 50.000 4.82 0.00 0.00 4.41
2236 2308 2.093500 TGATGAGTACGAAGGCAATGCT 60.093 45.455 4.82 0.00 0.00 3.79
2237 2309 2.279741 TGATGAGTACGAAGGCAATGC 58.720 47.619 0.00 0.00 0.00 3.56
2238 2310 4.025396 GTGATGATGAGTACGAAGGCAATG 60.025 45.833 0.00 0.00 0.00 2.82
2239 2311 4.122776 GTGATGATGAGTACGAAGGCAAT 58.877 43.478 0.00 0.00 0.00 3.56
2240 2312 3.521560 GTGATGATGAGTACGAAGGCAA 58.478 45.455 0.00 0.00 0.00 4.52
2241 2313 2.479560 CGTGATGATGAGTACGAAGGCA 60.480 50.000 0.00 0.00 38.72 4.75
2242 2314 2.120232 CGTGATGATGAGTACGAAGGC 58.880 52.381 0.00 0.00 38.72 4.35
2243 2315 2.732366 CCGTGATGATGAGTACGAAGG 58.268 52.381 0.00 0.00 38.72 3.46
2244 2316 2.120232 GCCGTGATGATGAGTACGAAG 58.880 52.381 0.00 0.00 38.72 3.79
2245 2317 1.202371 GGCCGTGATGATGAGTACGAA 60.202 52.381 0.00 0.00 38.72 3.85
2246 2318 0.384309 GGCCGTGATGATGAGTACGA 59.616 55.000 0.00 0.00 38.72 3.43
2247 2319 0.385751 AGGCCGTGATGATGAGTACG 59.614 55.000 0.00 0.00 36.39 3.67
2248 2320 2.361119 TGTAGGCCGTGATGATGAGTAC 59.639 50.000 0.00 0.00 0.00 2.73
2249 2321 2.661718 TGTAGGCCGTGATGATGAGTA 58.338 47.619 0.00 0.00 0.00 2.59
2250 2322 1.485124 TGTAGGCCGTGATGATGAGT 58.515 50.000 0.00 0.00 0.00 3.41
2251 2323 2.602257 TTGTAGGCCGTGATGATGAG 57.398 50.000 0.00 0.00 0.00 2.90
2252 2324 3.342377 TTTTGTAGGCCGTGATGATGA 57.658 42.857 0.00 0.00 0.00 2.92
2253 2325 4.637483 AATTTTGTAGGCCGTGATGATG 57.363 40.909 0.00 0.00 0.00 3.07
2254 2326 4.142182 CCAAATTTTGTAGGCCGTGATGAT 60.142 41.667 8.26 0.00 0.00 2.45
2255 2327 3.192422 CCAAATTTTGTAGGCCGTGATGA 59.808 43.478 8.26 0.00 0.00 2.92
2256 2328 3.192422 TCCAAATTTTGTAGGCCGTGATG 59.808 43.478 8.26 0.00 0.00 3.07
2257 2329 3.426615 TCCAAATTTTGTAGGCCGTGAT 58.573 40.909 8.26 0.00 0.00 3.06
2258 2330 2.865079 TCCAAATTTTGTAGGCCGTGA 58.135 42.857 8.26 0.00 0.00 4.35
2259 2331 3.574614 CTTCCAAATTTTGTAGGCCGTG 58.425 45.455 8.26 0.00 0.00 4.94
2260 2332 2.029380 GCTTCCAAATTTTGTAGGCCGT 60.029 45.455 8.26 0.00 0.00 5.68
2261 2333 2.231235 AGCTTCCAAATTTTGTAGGCCG 59.769 45.455 8.26 0.00 0.00 6.13
2262 2334 3.961480 AGCTTCCAAATTTTGTAGGCC 57.039 42.857 8.26 0.00 0.00 5.19
2263 2335 3.920412 CGAAGCTTCCAAATTTTGTAGGC 59.080 43.478 20.62 4.72 0.00 3.93
2281 2353 1.264288 GAAGACCCAGTTGTTGCGAAG 59.736 52.381 0.00 0.00 0.00 3.79
2282 2354 1.305201 GAAGACCCAGTTGTTGCGAA 58.695 50.000 0.00 0.00 0.00 4.70
2283 2355 0.179234 TGAAGACCCAGTTGTTGCGA 59.821 50.000 0.00 0.00 0.00 5.10
2284 2356 1.021202 TTGAAGACCCAGTTGTTGCG 58.979 50.000 0.00 0.00 0.00 4.85
2285 2357 1.268539 CGTTGAAGACCCAGTTGTTGC 60.269 52.381 0.00 0.00 0.00 4.17
2286 2358 1.333619 CCGTTGAAGACCCAGTTGTTG 59.666 52.381 0.00 0.00 0.00 3.33
2287 2359 1.675552 CCGTTGAAGACCCAGTTGTT 58.324 50.000 0.00 0.00 0.00 2.83
2288 2360 0.179029 CCCGTTGAAGACCCAGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
2289 2361 0.107831 TCCCGTTGAAGACCCAGTTG 59.892 55.000 0.00 0.00 0.00 3.16
2290 2362 0.841289 TTCCCGTTGAAGACCCAGTT 59.159 50.000 0.00 0.00 0.00 3.16
2291 2363 2.535224 TTCCCGTTGAAGACCCAGT 58.465 52.632 0.00 0.00 0.00 4.00
2299 2371 2.322658 ACAGACCTACTTCCCGTTGAA 58.677 47.619 0.00 0.00 0.00 2.69
2300 2372 2.005370 ACAGACCTACTTCCCGTTGA 57.995 50.000 0.00 0.00 0.00 3.18
2301 2373 3.947910 TTACAGACCTACTTCCCGTTG 57.052 47.619 0.00 0.00 0.00 4.10
2302 2374 3.305608 CGTTTACAGACCTACTTCCCGTT 60.306 47.826 0.00 0.00 0.00 4.44
2303 2375 2.229784 CGTTTACAGACCTACTTCCCGT 59.770 50.000 0.00 0.00 0.00 5.28
2304 2376 2.489329 TCGTTTACAGACCTACTTCCCG 59.511 50.000 0.00 0.00 0.00 5.14
2305 2377 3.509184 ACTCGTTTACAGACCTACTTCCC 59.491 47.826 0.00 0.00 0.00 3.97
2306 2378 4.380339 GGACTCGTTTACAGACCTACTTCC 60.380 50.000 0.00 0.00 0.00 3.46
2307 2379 4.217118 TGGACTCGTTTACAGACCTACTTC 59.783 45.833 0.00 0.00 0.00 3.01
2308 2380 4.147321 TGGACTCGTTTACAGACCTACTT 58.853 43.478 0.00 0.00 0.00 2.24
2309 2381 3.757493 CTGGACTCGTTTACAGACCTACT 59.243 47.826 0.00 0.00 32.86 2.57
2310 2382 3.505293 ACTGGACTCGTTTACAGACCTAC 59.495 47.826 5.41 0.00 35.08 3.18
2311 2383 3.759581 ACTGGACTCGTTTACAGACCTA 58.240 45.455 5.41 0.00 35.08 3.08
2312 2384 2.595238 ACTGGACTCGTTTACAGACCT 58.405 47.619 5.41 0.00 35.08 3.85
2313 2385 3.315418 GAACTGGACTCGTTTACAGACC 58.685 50.000 5.41 0.00 35.08 3.85
2314 2386 2.978489 CGAACTGGACTCGTTTACAGAC 59.022 50.000 5.41 0.00 35.08 3.51
2315 2387 2.880268 TCGAACTGGACTCGTTTACAGA 59.120 45.455 5.41 0.00 37.56 3.41
2316 2388 3.278367 TCGAACTGGACTCGTTTACAG 57.722 47.619 0.00 0.00 37.56 2.74
2317 2389 3.713858 TTCGAACTGGACTCGTTTACA 57.286 42.857 0.00 0.00 37.56 2.41
2318 2390 5.860716 ACTTATTCGAACTGGACTCGTTTAC 59.139 40.000 0.00 0.00 37.56 2.01
2319 2391 6.017400 ACTTATTCGAACTGGACTCGTTTA 57.983 37.500 0.00 0.00 37.56 2.01
2320 2392 4.879598 ACTTATTCGAACTGGACTCGTTT 58.120 39.130 0.00 0.00 37.56 3.60
2321 2393 4.516365 ACTTATTCGAACTGGACTCGTT 57.484 40.909 0.00 0.00 37.56 3.85
2322 2394 4.235360 CAACTTATTCGAACTGGACTCGT 58.765 43.478 0.00 0.00 37.56 4.18
2323 2395 3.612860 CCAACTTATTCGAACTGGACTCG 59.387 47.826 0.00 0.00 37.66 4.18
2324 2396 4.817517 TCCAACTTATTCGAACTGGACTC 58.182 43.478 0.00 0.00 0.00 3.36
2325 2397 4.884668 TCCAACTTATTCGAACTGGACT 57.115 40.909 0.00 0.00 0.00 3.85
2326 2398 7.010275 GTCTAATCCAACTTATTCGAACTGGAC 59.990 40.741 0.00 0.00 35.86 4.02
2327 2399 7.039882 GTCTAATCCAACTTATTCGAACTGGA 58.960 38.462 0.00 8.48 37.37 3.86
2328 2400 7.042335 AGTCTAATCCAACTTATTCGAACTGG 58.958 38.462 0.00 2.91 0.00 4.00
2329 2401 7.043986 CGAGTCTAATCCAACTTATTCGAACTG 60.044 40.741 0.00 0.00 0.00 3.16
2330 2402 6.973474 CGAGTCTAATCCAACTTATTCGAACT 59.027 38.462 0.00 0.00 0.00 3.01
2331 2403 6.198591 CCGAGTCTAATCCAACTTATTCGAAC 59.801 42.308 0.00 0.00 0.00 3.95
2332 2404 6.270815 CCGAGTCTAATCCAACTTATTCGAA 58.729 40.000 0.00 0.00 0.00 3.71
2333 2405 5.735354 GCCGAGTCTAATCCAACTTATTCGA 60.735 44.000 0.00 0.00 0.00 3.71
2334 2406 4.444720 GCCGAGTCTAATCCAACTTATTCG 59.555 45.833 0.00 0.00 0.00 3.34
2335 2407 5.602628 AGCCGAGTCTAATCCAACTTATTC 58.397 41.667 0.00 0.00 0.00 1.75
2336 2408 5.128827 TGAGCCGAGTCTAATCCAACTTATT 59.871 40.000 0.00 0.00 0.00 1.40
2337 2409 4.649674 TGAGCCGAGTCTAATCCAACTTAT 59.350 41.667 0.00 0.00 0.00 1.73
2338 2410 4.021229 TGAGCCGAGTCTAATCCAACTTA 58.979 43.478 0.00 0.00 0.00 2.24
2339 2411 2.832129 TGAGCCGAGTCTAATCCAACTT 59.168 45.455 0.00 0.00 0.00 2.66
2340 2412 2.457598 TGAGCCGAGTCTAATCCAACT 58.542 47.619 0.00 0.00 0.00 3.16
2341 2413 2.930682 GTTGAGCCGAGTCTAATCCAAC 59.069 50.000 0.00 0.00 0.00 3.77
2342 2414 2.832129 AGTTGAGCCGAGTCTAATCCAA 59.168 45.455 0.00 0.00 0.00 3.53
2343 2415 2.457598 AGTTGAGCCGAGTCTAATCCA 58.542 47.619 0.00 0.00 0.00 3.41
2344 2416 3.528597 AAGTTGAGCCGAGTCTAATCC 57.471 47.619 0.00 0.00 0.00 3.01
2345 2417 9.909644 TTAATATAAGTTGAGCCGAGTCTAATC 57.090 33.333 0.00 0.00 0.00 1.75
2349 2421 9.614792 ATTTTTAATATAAGTTGAGCCGAGTCT 57.385 29.630 0.00 0.00 0.00 3.24
2373 2445 9.423061 AGTTTATGCTCGCTTGAATTTTAAATT 57.577 25.926 2.23 2.23 0.00 1.82
2374 2446 8.863049 CAGTTTATGCTCGCTTGAATTTTAAAT 58.137 29.630 0.00 0.00 0.00 1.40
2375 2447 8.079203 TCAGTTTATGCTCGCTTGAATTTTAAA 58.921 29.630 0.00 0.00 0.00 1.52
2376 2448 7.589395 TCAGTTTATGCTCGCTTGAATTTTAA 58.411 30.769 0.00 0.00 0.00 1.52
2377 2449 7.094805 ACTCAGTTTATGCTCGCTTGAATTTTA 60.095 33.333 0.00 0.00 0.00 1.52
2378 2450 6.012658 TCAGTTTATGCTCGCTTGAATTTT 57.987 33.333 0.00 0.00 0.00 1.82
2379 2451 5.182001 ACTCAGTTTATGCTCGCTTGAATTT 59.818 36.000 0.00 0.00 0.00 1.82
2380 2452 4.697352 ACTCAGTTTATGCTCGCTTGAATT 59.303 37.500 0.00 0.00 0.00 2.17
2381 2453 4.093998 CACTCAGTTTATGCTCGCTTGAAT 59.906 41.667 0.00 0.00 0.00 2.57
2382 2454 3.433274 CACTCAGTTTATGCTCGCTTGAA 59.567 43.478 0.00 0.00 0.00 2.69
2383 2455 2.995939 CACTCAGTTTATGCTCGCTTGA 59.004 45.455 0.00 0.00 0.00 3.02
2384 2456 2.995939 TCACTCAGTTTATGCTCGCTTG 59.004 45.455 0.00 0.00 0.00 4.01
2385 2457 3.319137 TCACTCAGTTTATGCTCGCTT 57.681 42.857 0.00 0.00 0.00 4.68
2386 2458 3.257393 CTTCACTCAGTTTATGCTCGCT 58.743 45.455 0.00 0.00 0.00 4.93
2387 2459 2.222908 GCTTCACTCAGTTTATGCTCGC 60.223 50.000 0.00 0.00 0.00 5.03
2388 2460 3.257393 AGCTTCACTCAGTTTATGCTCG 58.743 45.455 0.00 0.00 0.00 5.03
2389 2461 6.727824 TTAAGCTTCACTCAGTTTATGCTC 57.272 37.500 0.00 0.00 0.00 4.26
2390 2462 6.712547 ACTTTAAGCTTCACTCAGTTTATGCT 59.287 34.615 0.00 0.00 0.00 3.79
2391 2463 6.903419 ACTTTAAGCTTCACTCAGTTTATGC 58.097 36.000 0.00 0.00 0.00 3.14
2392 2464 7.116376 TCGACTTTAAGCTTCACTCAGTTTATG 59.884 37.037 0.00 0.00 0.00 1.90
2393 2465 7.152645 TCGACTTTAAGCTTCACTCAGTTTAT 58.847 34.615 0.00 0.00 0.00 1.40
2394 2466 6.509656 TCGACTTTAAGCTTCACTCAGTTTA 58.490 36.000 0.00 0.00 0.00 2.01
2395 2467 5.357257 TCGACTTTAAGCTTCACTCAGTTT 58.643 37.500 0.00 0.00 0.00 2.66
2396 2468 4.945246 TCGACTTTAAGCTTCACTCAGTT 58.055 39.130 0.00 0.00 0.00 3.16
2397 2469 4.551388 CTCGACTTTAAGCTTCACTCAGT 58.449 43.478 0.00 0.00 0.00 3.41
2398 2470 3.366422 GCTCGACTTTAAGCTTCACTCAG 59.634 47.826 0.00 0.00 35.60 3.35
2399 2471 3.005897 AGCTCGACTTTAAGCTTCACTCA 59.994 43.478 0.00 0.00 46.49 3.41
2400 2472 3.366422 CAGCTCGACTTTAAGCTTCACTC 59.634 47.826 0.00 0.00 46.49 3.51
2401 2473 3.243907 ACAGCTCGACTTTAAGCTTCACT 60.244 43.478 0.00 0.00 46.49 3.41
2402 2474 3.060602 ACAGCTCGACTTTAAGCTTCAC 58.939 45.455 0.00 0.00 46.49 3.18
2403 2475 3.386768 ACAGCTCGACTTTAAGCTTCA 57.613 42.857 0.00 0.00 46.49 3.02
2404 2476 5.840940 TTTACAGCTCGACTTTAAGCTTC 57.159 39.130 0.00 0.00 46.49 3.86
2405 2477 6.260271 ACTTTTTACAGCTCGACTTTAAGCTT 59.740 34.615 3.48 3.48 46.49 3.74
2407 2479 5.846473 CACTTTTTACAGCTCGACTTTAAGC 59.154 40.000 0.00 0.00 38.84 3.09
2408 2480 7.042658 AGTCACTTTTTACAGCTCGACTTTAAG 60.043 37.037 0.00 0.00 0.00 1.85
2409 2481 6.759827 AGTCACTTTTTACAGCTCGACTTTAA 59.240 34.615 0.00 0.00 0.00 1.52
2410 2482 6.278363 AGTCACTTTTTACAGCTCGACTTTA 58.722 36.000 0.00 0.00 0.00 1.85
2411 2483 5.116882 AGTCACTTTTTACAGCTCGACTTT 58.883 37.500 0.00 0.00 0.00 2.66
2412 2484 4.694339 AGTCACTTTTTACAGCTCGACTT 58.306 39.130 0.00 0.00 0.00 3.01
2413 2485 4.299978 GAGTCACTTTTTACAGCTCGACT 58.700 43.478 0.00 0.00 35.29 4.18
2414 2486 3.119792 CGAGTCACTTTTTACAGCTCGAC 59.880 47.826 5.28 0.00 44.58 4.20
2415 2487 3.243301 ACGAGTCACTTTTTACAGCTCGA 60.243 43.478 16.19 0.00 44.58 4.04
2416 2488 3.050619 ACGAGTCACTTTTTACAGCTCG 58.949 45.455 9.10 9.10 46.37 5.03
2417 2489 4.745620 AGAACGAGTCACTTTTTACAGCTC 59.254 41.667 0.00 0.00 0.00 4.09
2418 2490 4.694339 AGAACGAGTCACTTTTTACAGCT 58.306 39.130 0.00 0.00 0.00 4.24
2419 2491 4.506654 TGAGAACGAGTCACTTTTTACAGC 59.493 41.667 0.00 0.00 0.00 4.40
2420 2492 5.749109 ACTGAGAACGAGTCACTTTTTACAG 59.251 40.000 0.00 0.00 0.00 2.74
2421 2493 5.657474 ACTGAGAACGAGTCACTTTTTACA 58.343 37.500 0.00 0.00 0.00 2.41
2422 2494 6.585389 AACTGAGAACGAGTCACTTTTTAC 57.415 37.500 0.00 0.00 0.00 2.01
2423 2495 6.592607 ACAAACTGAGAACGAGTCACTTTTTA 59.407 34.615 0.00 0.00 0.00 1.52
2424 2496 5.411669 ACAAACTGAGAACGAGTCACTTTTT 59.588 36.000 0.00 0.00 0.00 1.94
2425 2497 4.935808 ACAAACTGAGAACGAGTCACTTTT 59.064 37.500 0.00 0.00 0.00 2.27
2426 2498 4.504858 ACAAACTGAGAACGAGTCACTTT 58.495 39.130 0.00 0.00 0.00 2.66
2427 2499 4.124851 ACAAACTGAGAACGAGTCACTT 57.875 40.909 0.00 0.00 0.00 3.16
2428 2500 3.802948 ACAAACTGAGAACGAGTCACT 57.197 42.857 0.00 0.00 0.00 3.41
2429 2501 4.802039 TGTTACAAACTGAGAACGAGTCAC 59.198 41.667 0.00 0.00 0.00 3.67
2430 2502 5.001237 TGTTACAAACTGAGAACGAGTCA 57.999 39.130 0.00 0.00 0.00 3.41
2431 2503 5.961395 TTGTTACAAACTGAGAACGAGTC 57.039 39.130 0.00 0.00 0.00 3.36
2432 2504 6.281405 AGATTGTTACAAACTGAGAACGAGT 58.719 36.000 7.07 0.00 0.00 4.18
2433 2505 6.771188 AGATTGTTACAAACTGAGAACGAG 57.229 37.500 7.07 0.00 0.00 4.18
2434 2506 7.654568 TCTAGATTGTTACAAACTGAGAACGA 58.345 34.615 16.38 2.95 0.00 3.85
2435 2507 7.410942 GCTCTAGATTGTTACAAACTGAGAACG 60.411 40.741 23.89 12.65 0.00 3.95
2436 2508 7.600752 AGCTCTAGATTGTTACAAACTGAGAAC 59.399 37.037 23.89 15.58 0.00 3.01
2437 2509 7.671302 AGCTCTAGATTGTTACAAACTGAGAA 58.329 34.615 23.89 7.01 0.00 2.87
2438 2510 7.233389 AGCTCTAGATTGTTACAAACTGAGA 57.767 36.000 23.89 17.65 0.00 3.27
2439 2511 8.462811 TCTAGCTCTAGATTGTTACAAACTGAG 58.537 37.037 16.38 18.32 37.28 3.35
2440 2512 8.349568 TCTAGCTCTAGATTGTTACAAACTGA 57.650 34.615 16.38 11.03 37.28 3.41
2441 2513 8.988064 TTCTAGCTCTAGATTGTTACAAACTG 57.012 34.615 16.38 7.90 41.37 3.16
2442 2514 9.998106 TTTTCTAGCTCTAGATTGTTACAAACT 57.002 29.630 12.26 12.26 41.37 2.66
2444 2516 9.436957 CCTTTTCTAGCTCTAGATTGTTACAAA 57.563 33.333 0.66 3.45 41.37 2.83
2445 2517 8.812972 TCCTTTTCTAGCTCTAGATTGTTACAA 58.187 33.333 0.00 0.00 41.37 2.41
2446 2518 8.362464 TCCTTTTCTAGCTCTAGATTGTTACA 57.638 34.615 7.38 0.00 41.37 2.41
2447 2519 9.471084 GATCCTTTTCTAGCTCTAGATTGTTAC 57.529 37.037 7.38 0.00 41.37 2.50
2448 2520 8.353684 CGATCCTTTTCTAGCTCTAGATTGTTA 58.646 37.037 7.38 0.00 41.37 2.41
2449 2521 7.068839 TCGATCCTTTTCTAGCTCTAGATTGTT 59.931 37.037 7.38 0.00 41.37 2.83
2450 2522 6.547880 TCGATCCTTTTCTAGCTCTAGATTGT 59.452 38.462 7.38 0.00 41.37 2.71
2451 2523 6.861055 GTCGATCCTTTTCTAGCTCTAGATTG 59.139 42.308 7.38 2.23 41.37 2.67
2452 2524 6.547880 TGTCGATCCTTTTCTAGCTCTAGATT 59.452 38.462 7.38 0.00 41.37 2.40
2453 2525 6.065374 TGTCGATCCTTTTCTAGCTCTAGAT 58.935 40.000 7.38 0.00 41.37 1.98
2454 2526 5.437946 TGTCGATCCTTTTCTAGCTCTAGA 58.562 41.667 2.65 2.65 40.17 2.43
2455 2527 5.278266 CCTGTCGATCCTTTTCTAGCTCTAG 60.278 48.000 0.00 0.00 34.56 2.43
2456 2528 4.580995 CCTGTCGATCCTTTTCTAGCTCTA 59.419 45.833 0.00 0.00 0.00 2.43
2457 2529 3.383185 CCTGTCGATCCTTTTCTAGCTCT 59.617 47.826 0.00 0.00 0.00 4.09
2458 2530 3.491792 CCCTGTCGATCCTTTTCTAGCTC 60.492 52.174 0.00 0.00 0.00 4.09
2459 2531 2.432510 CCCTGTCGATCCTTTTCTAGCT 59.567 50.000 0.00 0.00 0.00 3.32
2460 2532 2.431057 TCCCTGTCGATCCTTTTCTAGC 59.569 50.000 0.00 0.00 0.00 3.42
2461 2533 3.954904 TCTCCCTGTCGATCCTTTTCTAG 59.045 47.826 0.00 0.00 0.00 2.43
2462 2534 3.977312 TCTCCCTGTCGATCCTTTTCTA 58.023 45.455 0.00 0.00 0.00 2.10
2463 2535 2.821437 TCTCCCTGTCGATCCTTTTCT 58.179 47.619 0.00 0.00 0.00 2.52
2464 2536 3.526534 CTTCTCCCTGTCGATCCTTTTC 58.473 50.000 0.00 0.00 0.00 2.29
2465 2537 2.355209 GCTTCTCCCTGTCGATCCTTTT 60.355 50.000 0.00 0.00 0.00 2.27
2466 2538 1.208293 GCTTCTCCCTGTCGATCCTTT 59.792 52.381 0.00 0.00 0.00 3.11
2467 2539 0.827368 GCTTCTCCCTGTCGATCCTT 59.173 55.000 0.00 0.00 0.00 3.36
2468 2540 0.324738 TGCTTCTCCCTGTCGATCCT 60.325 55.000 0.00 0.00 0.00 3.24
2469 2541 0.755686 ATGCTTCTCCCTGTCGATCC 59.244 55.000 0.00 0.00 0.00 3.36
2470 2542 2.609244 GCTATGCTTCTCCCTGTCGATC 60.609 54.545 0.00 0.00 0.00 3.69
2471 2543 1.342819 GCTATGCTTCTCCCTGTCGAT 59.657 52.381 0.00 0.00 0.00 3.59
2472 2544 0.747255 GCTATGCTTCTCCCTGTCGA 59.253 55.000 0.00 0.00 0.00 4.20
2473 2545 0.749649 AGCTATGCTTCTCCCTGTCG 59.250 55.000 0.00 0.00 33.89 4.35
2474 2546 2.559440 CAAGCTATGCTTCTCCCTGTC 58.441 52.381 1.45 0.00 46.77 3.51
2475 2547 1.211457 CCAAGCTATGCTTCTCCCTGT 59.789 52.381 1.45 0.00 46.77 4.00
2476 2548 1.487976 TCCAAGCTATGCTTCTCCCTG 59.512 52.381 1.45 0.00 46.77 4.45
2477 2549 1.767681 CTCCAAGCTATGCTTCTCCCT 59.232 52.381 1.45 0.00 46.77 4.20
2478 2550 1.765314 TCTCCAAGCTATGCTTCTCCC 59.235 52.381 1.45 0.00 46.77 4.30
2479 2551 2.484594 GGTCTCCAAGCTATGCTTCTCC 60.485 54.545 1.45 0.00 46.77 3.71
2480 2552 2.801342 CGGTCTCCAAGCTATGCTTCTC 60.801 54.545 1.45 0.00 46.77 2.87
2481 2553 1.137872 CGGTCTCCAAGCTATGCTTCT 59.862 52.381 1.45 0.00 46.77 2.85
2482 2554 1.137086 TCGGTCTCCAAGCTATGCTTC 59.863 52.381 1.45 0.00 46.77 3.86
2484 2556 1.195115 TTCGGTCTCCAAGCTATGCT 58.805 50.000 0.00 0.00 42.56 3.79
2485 2557 1.936547 CTTTCGGTCTCCAAGCTATGC 59.063 52.381 0.00 0.00 0.00 3.14
2486 2558 2.555199 CCTTTCGGTCTCCAAGCTATG 58.445 52.381 0.00 0.00 0.00 2.23
2487 2559 1.486726 CCCTTTCGGTCTCCAAGCTAT 59.513 52.381 0.00 0.00 0.00 2.97
2488 2560 0.902531 CCCTTTCGGTCTCCAAGCTA 59.097 55.000 0.00 0.00 0.00 3.32
2489 2561 1.128188 ACCCTTTCGGTCTCCAAGCT 61.128 55.000 0.00 0.00 43.58 3.74
2490 2562 1.375326 ACCCTTTCGGTCTCCAAGC 59.625 57.895 0.00 0.00 43.58 4.01
2499 2571 2.125512 CGCTGAGGACCCTTTCGG 60.126 66.667 0.00 0.00 37.81 4.30
2500 2572 2.815647 GCGCTGAGGACCCTTTCG 60.816 66.667 0.00 0.00 0.00 3.46
2501 2573 1.743252 CTGCGCTGAGGACCCTTTC 60.743 63.158 9.73 0.00 0.00 2.62
2502 2574 2.348998 CTGCGCTGAGGACCCTTT 59.651 61.111 9.73 0.00 0.00 3.11
2503 2575 3.710722 CCTGCGCTGAGGACCCTT 61.711 66.667 16.65 0.00 34.69 3.95
2504 2576 3.602075 TACCTGCGCTGAGGACCCT 62.602 63.158 19.86 0.64 36.51 4.34
2505 2577 2.579684 CTTACCTGCGCTGAGGACCC 62.580 65.000 19.86 0.00 36.51 4.46
2506 2578 1.153549 CTTACCTGCGCTGAGGACC 60.154 63.158 19.86 0.00 36.51 4.46
2507 2579 0.246635 TTCTTACCTGCGCTGAGGAC 59.753 55.000 19.86 0.00 36.51 3.85
2508 2580 0.532573 CTTCTTACCTGCGCTGAGGA 59.467 55.000 19.86 2.41 36.51 3.71
2509 2581 0.460987 CCTTCTTACCTGCGCTGAGG 60.461 60.000 16.65 14.21 39.28 3.86
2510 2582 0.532573 TCCTTCTTACCTGCGCTGAG 59.467 55.000 16.65 8.42 0.00 3.35
2511 2583 0.532573 CTCCTTCTTACCTGCGCTGA 59.467 55.000 16.65 0.00 0.00 4.26
2512 2584 0.532573 TCTCCTTCTTACCTGCGCTG 59.467 55.000 9.73 8.47 0.00 5.18
2513 2585 1.267121 TTCTCCTTCTTACCTGCGCT 58.733 50.000 9.73 0.00 0.00 5.92
2514 2586 1.936547 CATTCTCCTTCTTACCTGCGC 59.063 52.381 0.00 0.00 0.00 6.09
2515 2587 1.936547 GCATTCTCCTTCTTACCTGCG 59.063 52.381 0.00 0.00 0.00 5.18
2516 2588 2.092699 AGGCATTCTCCTTCTTACCTGC 60.093 50.000 0.00 0.00 30.82 4.85
2517 2589 3.539604 CAGGCATTCTCCTTCTTACCTG 58.460 50.000 0.00 0.00 37.69 4.00
2518 2590 2.092699 GCAGGCATTCTCCTTCTTACCT 60.093 50.000 0.00 0.00 33.25 3.08
2519 2591 2.293170 GCAGGCATTCTCCTTCTTACC 58.707 52.381 0.00 0.00 33.25 2.85
2520 2592 2.680339 GTGCAGGCATTCTCCTTCTTAC 59.320 50.000 0.00 0.00 33.25 2.34
2521 2593 2.573462 AGTGCAGGCATTCTCCTTCTTA 59.427 45.455 0.00 0.00 33.25 2.10
2522 2594 1.353694 AGTGCAGGCATTCTCCTTCTT 59.646 47.619 0.00 0.00 33.25 2.52
2523 2595 0.990374 AGTGCAGGCATTCTCCTTCT 59.010 50.000 0.00 0.00 33.25 2.85
2524 2596 1.093159 CAGTGCAGGCATTCTCCTTC 58.907 55.000 0.00 0.00 33.25 3.46
2525 2597 0.694771 TCAGTGCAGGCATTCTCCTT 59.305 50.000 0.00 0.00 33.25 3.36
2526 2598 0.694771 TTCAGTGCAGGCATTCTCCT 59.305 50.000 0.00 0.00 36.78 3.69
2527 2599 1.674962 GATTCAGTGCAGGCATTCTCC 59.325 52.381 0.00 0.00 0.00 3.71
2528 2600 2.362736 TGATTCAGTGCAGGCATTCTC 58.637 47.619 0.00 0.00 0.00 2.87
2529 2601 2.490903 GTTGATTCAGTGCAGGCATTCT 59.509 45.455 0.00 0.00 0.00 2.40
2530 2602 2.229543 TGTTGATTCAGTGCAGGCATTC 59.770 45.455 0.00 0.00 0.00 2.67
2531 2603 2.029649 GTGTTGATTCAGTGCAGGCATT 60.030 45.455 0.00 0.00 0.00 3.56
2532 2604 1.542915 GTGTTGATTCAGTGCAGGCAT 59.457 47.619 0.00 0.00 0.00 4.40
2533 2605 0.953727 GTGTTGATTCAGTGCAGGCA 59.046 50.000 0.00 0.00 0.00 4.75
2534 2606 0.110056 CGTGTTGATTCAGTGCAGGC 60.110 55.000 0.00 0.00 0.00 4.85
2535 2607 1.195448 GACGTGTTGATTCAGTGCAGG 59.805 52.381 0.00 0.00 0.00 4.85
2536 2608 2.096565 CAGACGTGTTGATTCAGTGCAG 60.097 50.000 0.00 0.00 0.00 4.41
2537 2609 1.866601 CAGACGTGTTGATTCAGTGCA 59.133 47.619 0.00 0.00 0.00 4.57
2538 2610 2.096713 GTCAGACGTGTTGATTCAGTGC 60.097 50.000 0.00 0.00 0.00 4.40
2539 2611 2.153817 CGTCAGACGTGTTGATTCAGTG 59.846 50.000 15.21 0.00 36.74 3.66
2540 2612 2.034179 TCGTCAGACGTGTTGATTCAGT 59.966 45.455 22.16 0.00 43.14 3.41
2541 2613 2.405357 GTCGTCAGACGTGTTGATTCAG 59.595 50.000 22.16 0.00 43.14 3.02
2542 2614 2.390938 GTCGTCAGACGTGTTGATTCA 58.609 47.619 22.16 0.00 43.14 2.57
2554 2626 2.338620 CGTGCCCTTGTCGTCAGA 59.661 61.111 0.00 0.00 0.00 3.27
2555 2627 3.414700 GCGTGCCCTTGTCGTCAG 61.415 66.667 0.00 0.00 0.00 3.51
2556 2628 4.980805 GGCGTGCCCTTGTCGTCA 62.981 66.667 0.00 0.00 0.00 4.35
2567 2639 3.573491 GATTAGGCCACGGCGTGC 61.573 66.667 33.15 26.21 43.06 5.34
2568 2640 2.125310 TGATTAGGCCACGGCGTG 60.125 61.111 31.78 31.78 43.06 5.34
2569 2641 2.125269 GTGATTAGGCCACGGCGT 60.125 61.111 6.77 6.77 43.06 5.68
2570 2642 2.895372 GGTGATTAGGCCACGGCG 60.895 66.667 5.01 4.80 43.06 6.46
2571 2643 1.819632 CTGGTGATTAGGCCACGGC 60.820 63.158 5.01 0.00 41.06 5.68
2572 2644 1.819632 GCTGGTGATTAGGCCACGG 60.820 63.158 5.01 0.00 35.48 4.94
2573 2645 1.078497 TGCTGGTGATTAGGCCACG 60.078 57.895 5.01 0.00 35.48 4.94
2574 2646 1.379642 GCTGCTGGTGATTAGGCCAC 61.380 60.000 5.01 0.00 0.00 5.01
2575 2647 1.077501 GCTGCTGGTGATTAGGCCA 60.078 57.895 5.01 0.00 0.00 5.36
2576 2648 1.825622 GGCTGCTGGTGATTAGGCC 60.826 63.158 0.00 0.00 0.00 5.19
2577 2649 1.825622 GGGCTGCTGGTGATTAGGC 60.826 63.158 0.00 0.00 35.24 3.93
2578 2650 1.152881 GGGGCTGCTGGTGATTAGG 60.153 63.158 0.00 0.00 0.00 2.69
2579 2651 0.749454 GTGGGGCTGCTGGTGATTAG 60.749 60.000 0.00 0.00 0.00 1.73
2580 2652 1.302949 GTGGGGCTGCTGGTGATTA 59.697 57.895 0.00 0.00 0.00 1.75
2581 2653 2.036256 GTGGGGCTGCTGGTGATT 59.964 61.111 0.00 0.00 0.00 2.57
2582 2654 3.259314 TGTGGGGCTGCTGGTGAT 61.259 61.111 0.00 0.00 0.00 3.06
2583 2655 4.269523 GTGTGGGGCTGCTGGTGA 62.270 66.667 0.00 0.00 0.00 4.02
2584 2656 3.873679 ATGTGTGGGGCTGCTGGTG 62.874 63.158 0.00 0.00 0.00 4.17
2585 2657 3.574074 GATGTGTGGGGCTGCTGGT 62.574 63.158 0.00 0.00 0.00 4.00
2586 2658 2.753043 GATGTGTGGGGCTGCTGG 60.753 66.667 0.00 0.00 0.00 4.85
2587 2659 3.129502 CGATGTGTGGGGCTGCTG 61.130 66.667 0.00 0.00 0.00 4.41
2588 2660 4.415150 CCGATGTGTGGGGCTGCT 62.415 66.667 0.00 0.00 0.00 4.24
2593 2665 4.802051 CTGGGCCGATGTGTGGGG 62.802 72.222 0.00 0.00 0.00 4.96
2595 2667 4.415150 AGCTGGGCCGATGTGTGG 62.415 66.667 0.00 0.00 0.00 4.17
2596 2668 2.821366 GAGCTGGGCCGATGTGTG 60.821 66.667 0.00 0.00 0.00 3.82
2597 2669 4.101448 GGAGCTGGGCCGATGTGT 62.101 66.667 0.00 0.00 0.00 3.72
2598 2670 2.898920 AATGGAGCTGGGCCGATGTG 62.899 60.000 0.00 0.00 0.00 3.21
2599 2671 2.683465 AATGGAGCTGGGCCGATGT 61.683 57.895 0.00 0.00 0.00 3.06
2600 2672 2.194056 AATGGAGCTGGGCCGATG 59.806 61.111 0.00 0.00 0.00 3.84



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.