Multiple sequence alignment - TraesCS5A01G389100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G389100 chr5A 100.000 4470 0 0 1 4470 585395602 585400071 0.000000e+00 8255.0
1 TraesCS5A01G389100 chr5A 92.619 691 46 3 2741 3428 585235999 585236687 0.000000e+00 989.0
2 TraesCS5A01G389100 chr5A 89.921 506 48 1 1024 1526 585234386 585234891 0.000000e+00 649.0
3 TraesCS5A01G389100 chr5A 86.200 500 47 18 1626 2115 585234977 585235464 5.120000e-144 521.0
4 TraesCS5A01G389100 chr5A 90.432 324 23 8 1 321 445435142 445435460 1.920000e-113 420.0
5 TraesCS5A01G389100 chr5A 86.957 322 36 4 1 321 705581767 705581451 1.530000e-94 357.0
6 TraesCS5A01G389100 chr5A 81.491 389 51 12 2232 2619 585235542 585235910 2.610000e-77 300.0
7 TraesCS5A01G389100 chr5A 81.433 307 43 13 1226 1525 584965915 584966214 5.780000e-59 239.0
8 TraesCS5A01G389100 chr5A 83.240 179 30 0 1880 2058 584966441 584966619 9.950000e-37 165.0
9 TraesCS5A01G389100 chr5A 88.000 75 9 0 2847 2921 585215944 585216018 6.160000e-14 89.8
10 TraesCS5A01G389100 chr5A 72.973 296 51 23 3881 4166 184259606 184259330 4.790000e-10 76.8
11 TraesCS5A01G389100 chr5D 92.994 2769 125 30 718 3483 464990050 464992752 0.000000e+00 3975.0
12 TraesCS5A01G389100 chr5D 91.533 685 53 3 2741 3422 464918279 464918961 0.000000e+00 939.0
13 TraesCS5A01G389100 chr5D 90.927 496 42 1 1032 1524 464916642 464917137 0.000000e+00 664.0
14 TraesCS5A01G389100 chr5D 87.723 505 42 13 1626 2116 464917231 464917729 5.020000e-159 571.0
15 TraesCS5A01G389100 chr5D 92.049 327 22 2 1 326 1889292 1889615 1.470000e-124 457.0
16 TraesCS5A01G389100 chr5D 88.623 334 31 4 1 330 123495998 123495668 2.500000e-107 399.0
17 TraesCS5A01G389100 chr5D 82.353 425 63 11 2199 2619 464917770 464918186 4.250000e-95 359.0
18 TraesCS5A01G389100 chr5D 83.110 373 53 8 3059 3426 464818155 464818522 9.270000e-87 331.0
19 TraesCS5A01G389100 chr5D 91.064 235 15 5 3616 3849 464992780 464993009 3.360000e-81 313.0
20 TraesCS5A01G389100 chr5D 83.974 312 23 9 4082 4388 464993345 464993634 1.580000e-69 274.0
21 TraesCS5A01G389100 chr5D 81.107 307 44 13 1226 1525 464491671 464491970 2.690000e-57 233.0
22 TraesCS5A01G389100 chr5D 78.378 333 48 10 3923 4248 457668155 457668470 1.270000e-45 195.0
23 TraesCS5A01G389100 chr5D 76.658 377 72 12 3870 4233 547998699 547999072 1.270000e-45 195.0
24 TraesCS5A01G389100 chr5D 82.682 179 31 0 1880 2058 464492224 464492402 4.630000e-35 159.0
25 TraesCS5A01G389100 chr5B 93.051 1986 103 15 719 2697 572341489 572343446 0.000000e+00 2870.0
26 TraesCS5A01G389100 chr5B 93.978 1179 51 13 2747 3911 572343460 572344632 0.000000e+00 1766.0
27 TraesCS5A01G389100 chr5B 91.387 685 54 3 2741 3422 572143515 572144197 0.000000e+00 933.0
28 TraesCS5A01G389100 chr5B 89.919 496 47 1 1032 1524 572141865 572142360 1.750000e-178 636.0
29 TraesCS5A01G389100 chr5B 88.687 495 47 9 1626 2116 572142454 572142943 2.980000e-166 595.0
30 TraesCS5A01G389100 chr5B 85.619 452 32 9 3937 4383 572345807 572346230 1.140000e-120 444.0
31 TraesCS5A01G389100 chr5B 82.033 423 63 10 2199 2619 572143000 572143411 9.200000e-92 348.0
32 TraesCS5A01G389100 chr5B 82.620 374 53 10 3059 3426 571555016 571554649 2.010000e-83 320.0
33 TraesCS5A01G389100 chr5B 80.984 305 44 13 1229 1526 571836668 571836371 3.480000e-56 230.0
34 TraesCS5A01G389100 chr5B 79.724 217 40 4 1880 2094 571836089 571835875 2.150000e-33 154.0
35 TraesCS5A01G389100 chr1B 89.666 329 29 4 1 327 512697484 512697809 8.950000e-112 414.0
36 TraesCS5A01G389100 chr3B 89.091 330 34 2 1 329 758577017 758577345 4.160000e-110 409.0
37 TraesCS5A01G389100 chr3B 82.727 330 53 4 3867 4194 181782623 181782950 1.570000e-74 291.0
38 TraesCS5A01G389100 chr3B 77.749 382 71 11 3042 3416 237496155 237496529 5.820000e-54 222.0
39 TraesCS5A01G389100 chr3A 91.667 288 21 2 1 287 720440391 720440106 3.240000e-106 396.0
40 TraesCS5A01G389100 chr3A 77.726 431 68 19 2199 2620 106300942 106301353 5.780000e-59 239.0
41 TraesCS5A01G389100 chr3A 90.909 176 11 2 429 604 744760589 744760759 9.670000e-57 231.0
42 TraesCS5A01G389100 chr3A 87.065 201 26 0 1933 2133 106300708 106300908 1.250000e-55 228.0
43 TraesCS5A01G389100 chr3A 87.234 141 18 0 3276 3416 187272568 187272708 1.290000e-35 161.0
44 TraesCS5A01G389100 chr2D 87.273 330 38 4 1 326 445057074 445056745 1.520000e-99 374.0
45 TraesCS5A01G389100 chr2D 87.113 194 25 0 1331 1524 634257654 634257461 2.090000e-53 220.0
46 TraesCS5A01G389100 chr2D 75.691 362 74 12 1083 1437 579521503 579521149 7.690000e-38 169.0
47 TraesCS5A01G389100 chr2D 79.263 217 41 4 1878 2092 634257179 634256965 1.000000e-31 148.0
48 TraesCS5A01G389100 chr4B 87.267 322 34 5 1 321 665600031 665599716 1.180000e-95 361.0
49 TraesCS5A01G389100 chr2B 84.685 333 40 9 3870 4194 514346501 514346172 5.580000e-84 322.0
50 TraesCS5A01G389100 chr2B 87.629 194 24 0 1331 1524 777171090 777170897 4.500000e-55 226.0
51 TraesCS5A01G389100 chr2B 79.724 217 40 4 1878 2092 777170610 777170396 2.150000e-33 154.0
52 TraesCS5A01G389100 chr7A 81.333 375 60 8 3868 4234 19449901 19450273 3.380000e-76 296.0
53 TraesCS5A01G389100 chr7A 81.024 332 56 7 3868 4194 19509031 19509360 1.600000e-64 257.0
54 TraesCS5A01G389100 chr7A 91.111 180 13 3 432 609 692131475 692131297 1.610000e-59 241.0
55 TraesCS5A01G389100 chr7B 79.592 392 64 11 3872 4252 456057113 456056727 2.650000e-67 267.0
56 TraesCS5A01G389100 chr7D 79.328 387 67 9 3868 4244 18965971 18966354 4.440000e-65 259.0
57 TraesCS5A01G389100 chr2A 78.032 437 60 23 2199 2622 613184958 613184545 4.470000e-60 243.0
58 TraesCS5A01G389100 chr2A 89.941 169 17 0 434 602 702944118 702944286 7.530000e-53 219.0
59 TraesCS5A01G389100 chr2A 87.634 186 19 3 426 610 715471735 715471553 3.500000e-51 213.0
60 TraesCS5A01G389100 chr6A 87.624 202 19 6 415 612 38404432 38404631 3.480000e-56 230.0
61 TraesCS5A01G389100 chr6A 89.080 174 19 0 429 602 34240391 34240564 2.710000e-52 217.0
62 TraesCS5A01G389100 chr3D 88.710 186 17 4 423 607 572090934 572091116 1.620000e-54 224.0
63 TraesCS5A01G389100 chr3D 77.249 378 80 6 3042 3416 160708002 160708376 2.710000e-52 217.0
64 TraesCS5A01G389100 chrUn 88.701 177 16 4 431 605 474962514 474962340 3.500000e-51 213.0
65 TraesCS5A01G389100 chr4A 87.568 185 18 5 421 602 216010030 216010212 4.530000e-50 209.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G389100 chr5A 585395602 585400071 4469 False 8255.000000 8255 100.000000 1 4470 1 chr5A.!!$F3 4469
1 TraesCS5A01G389100 chr5A 585234386 585236687 2301 False 614.750000 989 87.557750 1024 3428 4 chr5A.!!$F5 2404
2 TraesCS5A01G389100 chr5A 584965915 584966619 704 False 202.000000 239 82.336500 1226 2058 2 chr5A.!!$F4 832
3 TraesCS5A01G389100 chr5D 464990050 464993634 3584 False 1520.666667 3975 89.344000 718 4388 3 chr5D.!!$F7 3670
4 TraesCS5A01G389100 chr5D 464916642 464918961 2319 False 633.250000 939 88.134000 1032 3422 4 chr5D.!!$F6 2390
5 TraesCS5A01G389100 chr5B 572341489 572346230 4741 False 1693.333333 2870 90.882667 719 4383 3 chr5B.!!$F2 3664
6 TraesCS5A01G389100 chr5B 572141865 572144197 2332 False 628.000000 933 88.006500 1032 3422 4 chr5B.!!$F1 2390
7 TraesCS5A01G389100 chr3A 106300708 106301353 645 False 233.500000 239 82.395500 1933 2620 2 chr3A.!!$F3 687

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
306 307 0.030235 CACTACGATTCGCCGGATGA 59.970 55.0 5.05 0.00 0.00 2.92 F
307 308 0.030369 ACTACGATTCGCCGGATGAC 59.970 55.0 5.05 0.00 0.00 3.06 F
715 716 0.036388 TTTAGCTCGGGGTCTTGCTG 60.036 55.0 0.00 0.00 37.02 4.41 F
1606 1626 0.037512 CTCTGTCACTCACCTGCTGG 60.038 60.0 8.29 8.29 39.83 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1623 1651 0.106708 TCTCTGCACACCTGTTCACC 59.893 55.000 0.00 0.00 0.00 4.02 R
1851 1890 1.242076 CTTGTTCCTGCAGTTCCCAG 58.758 55.000 13.81 0.00 0.00 4.45 R
2420 2502 1.332686 CCATGATCTGCAACATCACGG 59.667 52.381 9.63 7.84 33.04 4.94 R
3495 3600 0.874390 CAAGGTCCACGGTTCATGTG 59.126 55.000 0.00 0.00 37.09 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.759489 TTATTTCTGCAACATAGGTCTTGTT 57.241 32.000 0.00 0.00 37.79 2.83
31 32 5.633830 CAACATAGGTCTTGTTGCAGAAT 57.366 39.130 3.87 0.00 45.10 2.40
32 33 6.017400 CAACATAGGTCTTGTTGCAGAATT 57.983 37.500 3.87 0.00 45.10 2.17
33 34 6.449698 CAACATAGGTCTTGTTGCAGAATTT 58.550 36.000 3.87 0.00 45.10 1.82
34 35 6.655078 ACATAGGTCTTGTTGCAGAATTTT 57.345 33.333 0.00 0.00 0.00 1.82
35 36 6.449698 ACATAGGTCTTGTTGCAGAATTTTG 58.550 36.000 0.00 0.00 0.00 2.44
36 37 6.040842 ACATAGGTCTTGTTGCAGAATTTTGT 59.959 34.615 0.00 0.00 0.00 2.83
37 38 5.343307 AGGTCTTGTTGCAGAATTTTGTT 57.657 34.783 0.00 0.00 0.00 2.83
38 39 5.111293 AGGTCTTGTTGCAGAATTTTGTTG 58.889 37.500 0.00 0.00 0.00 3.33
39 40 4.260334 GGTCTTGTTGCAGAATTTTGTTGC 60.260 41.667 0.00 0.00 38.30 4.17
40 41 4.329528 GTCTTGTTGCAGAATTTTGTTGCA 59.670 37.500 0.00 1.42 45.28 4.08
44 45 2.200067 TGCAGAATTTTGTTGCAACGG 58.800 42.857 23.79 7.36 44.13 4.44
45 46 2.200899 GCAGAATTTTGTTGCAACGGT 58.799 42.857 23.79 7.47 37.75 4.83
46 47 2.607180 GCAGAATTTTGTTGCAACGGTT 59.393 40.909 23.79 15.02 37.75 4.44
47 48 3.543852 GCAGAATTTTGTTGCAACGGTTG 60.544 43.478 23.79 16.35 37.75 3.77
48 49 3.616379 CAGAATTTTGTTGCAACGGTTGT 59.384 39.130 23.79 11.44 0.00 3.32
49 50 4.092675 CAGAATTTTGTTGCAACGGTTGTT 59.907 37.500 23.79 14.37 39.43 2.83
50 51 4.693095 AGAATTTTGTTGCAACGGTTGTTT 59.307 33.333 23.79 12.43 35.72 2.83
51 52 5.180304 AGAATTTTGTTGCAACGGTTGTTTT 59.820 32.000 23.79 10.98 35.72 2.43
52 53 6.369065 AGAATTTTGTTGCAACGGTTGTTTTA 59.631 30.769 23.79 0.57 35.72 1.52
53 54 6.670077 ATTTTGTTGCAACGGTTGTTTTAT 57.330 29.167 23.79 5.08 35.72 1.40
54 55 5.704217 TTTGTTGCAACGGTTGTTTTATC 57.296 34.783 23.79 5.04 35.72 1.75
55 56 3.364062 TGTTGCAACGGTTGTTTTATCG 58.636 40.909 23.79 0.00 35.72 2.92
56 57 2.039327 TGCAACGGTTGTTTTATCGC 57.961 45.000 20.92 5.76 35.72 4.58
57 58 0.972013 GCAACGGTTGTTTTATCGCG 59.028 50.000 20.92 0.00 35.72 5.87
58 59 1.398705 GCAACGGTTGTTTTATCGCGA 60.399 47.619 20.92 13.09 35.72 5.87
59 60 2.906153 CAACGGTTGTTTTATCGCGAA 58.094 42.857 15.24 0.00 35.72 4.70
60 61 3.289911 CAACGGTTGTTTTATCGCGAAA 58.710 40.909 15.24 6.24 35.72 3.46
61 62 3.605743 ACGGTTGTTTTATCGCGAAAA 57.394 38.095 15.24 12.42 0.00 2.29
62 63 3.950078 ACGGTTGTTTTATCGCGAAAAA 58.050 36.364 15.24 17.54 30.36 1.94
86 87 7.764695 AAACATTACAACTAGGTTTTGTTGC 57.235 32.000 2.88 0.00 45.07 4.17
87 88 6.458232 ACATTACAACTAGGTTTTGTTGCA 57.542 33.333 2.88 0.00 45.07 4.08
88 89 6.868622 ACATTACAACTAGGTTTTGTTGCAA 58.131 32.000 0.00 0.00 45.07 4.08
89 90 7.496747 ACATTACAACTAGGTTTTGTTGCAAT 58.503 30.769 0.59 2.88 45.07 3.56
90 91 7.984617 ACATTACAACTAGGTTTTGTTGCAATT 59.015 29.630 0.59 0.00 45.07 2.32
91 92 8.825745 CATTACAACTAGGTTTTGTTGCAATTT 58.174 29.630 0.59 0.00 45.07 1.82
92 93 8.779354 TTACAACTAGGTTTTGTTGCAATTTT 57.221 26.923 0.59 0.00 45.07 1.82
93 94 7.680442 ACAACTAGGTTTTGTTGCAATTTTT 57.320 28.000 0.59 0.00 45.07 1.94
111 112 3.781079 TTTTGTGCAACTGAGGTCTTG 57.219 42.857 0.00 0.00 38.04 3.02
112 113 2.418368 TTGTGCAACTGAGGTCTTGT 57.582 45.000 0.00 0.00 38.04 3.16
113 114 2.418368 TGTGCAACTGAGGTCTTGTT 57.582 45.000 0.00 0.00 38.04 2.83
114 115 2.016318 TGTGCAACTGAGGTCTTGTTG 58.984 47.619 0.00 0.00 42.55 3.33
118 119 2.564771 CAACTGAGGTCTTGTTGCAGA 58.435 47.619 0.00 0.00 35.39 4.26
119 120 2.945008 CAACTGAGGTCTTGTTGCAGAA 59.055 45.455 0.00 0.00 35.39 3.02
120 121 3.281727 ACTGAGGTCTTGTTGCAGAAA 57.718 42.857 0.00 0.00 0.00 2.52
121 122 3.620488 ACTGAGGTCTTGTTGCAGAAAA 58.380 40.909 0.00 0.00 0.00 2.29
122 123 4.210331 ACTGAGGTCTTGTTGCAGAAAAT 58.790 39.130 0.00 0.00 0.00 1.82
123 124 4.646492 ACTGAGGTCTTGTTGCAGAAAATT 59.354 37.500 0.00 0.00 0.00 1.82
124 125 5.127682 ACTGAGGTCTTGTTGCAGAAAATTT 59.872 36.000 0.00 0.00 0.00 1.82
125 126 5.976458 TGAGGTCTTGTTGCAGAAAATTTT 58.024 33.333 2.28 2.28 0.00 1.82
126 127 6.042143 TGAGGTCTTGTTGCAGAAAATTTTC 58.958 36.000 21.00 21.00 37.45 2.29
127 128 5.043248 AGGTCTTGTTGCAGAAAATTTTCG 58.957 37.500 21.98 17.81 41.92 3.46
128 129 4.318050 GGTCTTGTTGCAGAAAATTTTCGC 60.318 41.667 26.53 26.53 41.92 4.70
129 130 4.267452 GTCTTGTTGCAGAAAATTTTCGCA 59.733 37.500 29.46 29.46 41.33 5.10
130 131 4.867047 TCTTGTTGCAGAAAATTTTCGCAA 59.133 33.333 33.76 33.76 45.14 4.85
133 134 4.775440 TTGCAGAAAATTTTCGCAACAG 57.225 36.364 33.76 20.38 43.93 3.16
134 135 4.039151 TGCAGAAAATTTTCGCAACAGA 57.961 36.364 30.27 17.25 40.69 3.41
135 136 4.043750 TGCAGAAAATTTTCGCAACAGAG 58.956 39.130 30.27 15.64 40.69 3.35
136 137 3.426525 GCAGAAAATTTTCGCAACAGAGG 59.573 43.478 27.46 13.21 41.92 3.69
137 138 4.610945 CAGAAAATTTTCGCAACAGAGGT 58.389 39.130 21.98 1.40 41.92 3.85
138 139 5.043248 CAGAAAATTTTCGCAACAGAGGTT 58.957 37.500 21.98 0.93 41.92 3.50
139 140 5.519927 CAGAAAATTTTCGCAACAGAGGTTT 59.480 36.000 21.98 0.75 41.92 3.27
140 141 6.035975 CAGAAAATTTTCGCAACAGAGGTTTT 59.964 34.615 21.98 0.35 41.92 2.43
141 142 5.717038 AAATTTTCGCAACAGAGGTTTTG 57.283 34.783 0.00 0.00 34.21 2.44
142 143 3.859411 TTTTCGCAACAGAGGTTTTGT 57.141 38.095 0.00 0.00 34.21 2.83
143 144 3.859411 TTTCGCAACAGAGGTTTTGTT 57.141 38.095 0.00 0.00 39.23 2.83
150 151 4.956793 CAACAGAGGTTTTGTTGCAAAAC 58.043 39.130 22.07 22.07 45.97 2.43
151 152 4.535526 ACAGAGGTTTTGTTGCAAAACT 57.464 36.364 26.23 17.13 39.41 2.66
152 153 5.652994 ACAGAGGTTTTGTTGCAAAACTA 57.347 34.783 26.23 0.31 39.41 2.24
153 154 5.650543 ACAGAGGTTTTGTTGCAAAACTAG 58.349 37.500 26.23 18.66 39.41 2.57
154 155 5.417580 ACAGAGGTTTTGTTGCAAAACTAGA 59.582 36.000 26.23 0.00 39.41 2.43
155 156 5.743872 CAGAGGTTTTGTTGCAAAACTAGAC 59.256 40.000 26.23 18.00 39.41 2.59
156 157 5.006153 AGGTTTTGTTGCAAAACTAGACC 57.994 39.130 26.23 16.22 39.41 3.85
157 158 4.116961 GGTTTTGTTGCAAAACTAGACCC 58.883 43.478 26.23 12.68 39.41 4.46
158 159 3.701532 TTTGTTGCAAAACTAGACCCG 57.298 42.857 0.00 0.00 0.00 5.28
159 160 2.335316 TGTTGCAAAACTAGACCCGT 57.665 45.000 0.00 0.00 0.00 5.28
160 161 2.215196 TGTTGCAAAACTAGACCCGTC 58.785 47.619 0.00 0.00 0.00 4.79
161 162 2.215196 GTTGCAAAACTAGACCCGTCA 58.785 47.619 0.00 0.00 0.00 4.35
162 163 2.812011 GTTGCAAAACTAGACCCGTCAT 59.188 45.455 0.00 0.00 0.00 3.06
163 164 3.965379 TGCAAAACTAGACCCGTCATA 57.035 42.857 0.00 0.00 0.00 2.15
164 165 3.857052 TGCAAAACTAGACCCGTCATAG 58.143 45.455 0.00 0.00 0.00 2.23
165 166 3.512329 TGCAAAACTAGACCCGTCATAGA 59.488 43.478 0.00 0.00 0.00 1.98
166 167 3.864003 GCAAAACTAGACCCGTCATAGAC 59.136 47.826 0.00 0.00 0.00 2.59
167 168 4.430908 CAAAACTAGACCCGTCATAGACC 58.569 47.826 0.00 0.00 0.00 3.85
168 169 3.377253 AACTAGACCCGTCATAGACCA 57.623 47.619 0.00 0.00 0.00 4.02
169 170 3.596940 ACTAGACCCGTCATAGACCAT 57.403 47.619 0.00 0.00 0.00 3.55
170 171 3.912248 ACTAGACCCGTCATAGACCATT 58.088 45.455 0.00 0.00 0.00 3.16
171 172 3.637229 ACTAGACCCGTCATAGACCATTG 59.363 47.826 0.00 0.00 0.00 2.82
172 173 1.139058 AGACCCGTCATAGACCATTGC 59.861 52.381 0.00 0.00 0.00 3.56
173 174 0.908910 ACCCGTCATAGACCATTGCA 59.091 50.000 0.00 0.00 0.00 4.08
174 175 1.280710 ACCCGTCATAGACCATTGCAA 59.719 47.619 0.00 0.00 0.00 4.08
175 176 1.670811 CCCGTCATAGACCATTGCAAC 59.329 52.381 0.00 0.00 0.00 4.17
176 177 2.355197 CCGTCATAGACCATTGCAACA 58.645 47.619 0.00 0.00 0.00 3.33
177 178 2.095853 CCGTCATAGACCATTGCAACAC 59.904 50.000 0.00 0.00 0.00 3.32
178 179 2.095853 CGTCATAGACCATTGCAACACC 59.904 50.000 0.00 0.00 0.00 4.16
179 180 3.081061 GTCATAGACCATTGCAACACCA 58.919 45.455 0.00 0.00 0.00 4.17
180 181 3.081061 TCATAGACCATTGCAACACCAC 58.919 45.455 0.00 0.00 0.00 4.16
181 182 2.647683 TAGACCATTGCAACACCACA 57.352 45.000 0.00 0.00 0.00 4.17
182 183 1.999648 AGACCATTGCAACACCACAT 58.000 45.000 0.00 0.00 0.00 3.21
183 184 3.153369 AGACCATTGCAACACCACATA 57.847 42.857 0.00 0.00 0.00 2.29
184 185 3.700538 AGACCATTGCAACACCACATAT 58.299 40.909 0.00 0.00 0.00 1.78
185 186 3.444742 AGACCATTGCAACACCACATATG 59.555 43.478 0.00 0.00 0.00 1.78
186 187 3.164268 ACCATTGCAACACCACATATGT 58.836 40.909 0.00 1.41 0.00 2.29
187 188 3.577848 ACCATTGCAACACCACATATGTT 59.422 39.130 5.37 0.00 40.95 2.71
188 189 4.040217 ACCATTGCAACACCACATATGTTT 59.960 37.500 5.37 0.00 38.22 2.83
189 190 4.626604 CCATTGCAACACCACATATGTTTC 59.373 41.667 5.37 0.00 38.22 2.78
190 191 5.472148 CATTGCAACACCACATATGTTTCT 58.528 37.500 5.37 0.00 38.22 2.52
191 192 4.502171 TGCAACACCACATATGTTTCTG 57.498 40.909 5.37 4.26 38.22 3.02
192 193 4.140536 TGCAACACCACATATGTTTCTGA 58.859 39.130 5.37 0.00 38.22 3.27
193 194 4.582240 TGCAACACCACATATGTTTCTGAA 59.418 37.500 5.37 0.00 38.22 3.02
194 195 5.068329 TGCAACACCACATATGTTTCTGAAA 59.932 36.000 5.37 0.00 38.22 2.69
195 196 6.158598 GCAACACCACATATGTTTCTGAAAT 58.841 36.000 5.37 0.00 38.22 2.17
196 197 7.040132 TGCAACACCACATATGTTTCTGAAATA 60.040 33.333 5.37 3.95 38.22 1.40
197 198 7.975616 GCAACACCACATATGTTTCTGAAATAT 59.024 33.333 15.24 15.24 38.22 1.28
200 201 8.840321 ACACCACATATGTTTCTGAAATATAGC 58.160 33.333 19.65 3.93 29.75 2.97
201 202 8.292448 CACCACATATGTTTCTGAAATATAGCC 58.708 37.037 19.65 3.34 29.75 3.93
202 203 8.220559 ACCACATATGTTTCTGAAATATAGCCT 58.779 33.333 19.65 5.94 29.75 4.58
203 204 8.725148 CCACATATGTTTCTGAAATATAGCCTC 58.275 37.037 19.65 2.14 29.75 4.70
204 205 9.499479 CACATATGTTTCTGAAATATAGCCTCT 57.501 33.333 19.65 5.38 29.75 3.69
205 206 9.499479 ACATATGTTTCTGAAATATAGCCTCTG 57.501 33.333 19.65 15.66 29.75 3.35
206 207 9.499479 CATATGTTTCTGAAATATAGCCTCTGT 57.501 33.333 19.65 4.28 29.75 3.41
208 209 8.814038 ATGTTTCTGAAATATAGCCTCTGTTT 57.186 30.769 10.19 0.00 0.00 2.83
209 210 8.268850 TGTTTCTGAAATATAGCCTCTGTTTC 57.731 34.615 6.06 0.00 0.00 2.78
210 211 7.064609 TGTTTCTGAAATATAGCCTCTGTTTCG 59.935 37.037 6.06 0.00 32.85 3.46
211 212 5.601662 TCTGAAATATAGCCTCTGTTTCGG 58.398 41.667 2.85 2.85 36.81 4.30
212 213 5.362717 TCTGAAATATAGCCTCTGTTTCGGA 59.637 40.000 6.72 6.72 40.14 4.55
213 214 5.984725 TGAAATATAGCCTCTGTTTCGGAA 58.015 37.500 0.00 0.00 32.85 4.30
214 215 6.049149 TGAAATATAGCCTCTGTTTCGGAAG 58.951 40.000 0.00 0.00 32.85 3.46
215 216 2.317530 ATAGCCTCTGTTTCGGAAGC 57.682 50.000 0.00 0.00 0.00 3.86
216 217 0.108804 TAGCCTCTGTTTCGGAAGCG 60.109 55.000 0.13 0.00 32.05 4.68
217 218 3.028366 GCCTCTGTTTCGGAAGCGC 62.028 63.158 0.00 0.00 0.00 5.92
218 219 2.730672 CCTCTGTTTCGGAAGCGCG 61.731 63.158 0.00 0.00 0.00 6.86
219 220 2.022129 CTCTGTTTCGGAAGCGCGT 61.022 57.895 8.43 0.00 0.00 6.01
220 221 1.557443 CTCTGTTTCGGAAGCGCGTT 61.557 55.000 8.43 0.00 0.00 4.84
221 222 1.154654 CTGTTTCGGAAGCGCGTTC 60.155 57.895 8.43 10.33 0.00 3.95
222 223 2.202008 GTTTCGGAAGCGCGTTCG 60.202 61.111 18.45 18.45 35.80 3.95
223 224 2.354891 TTTCGGAAGCGCGTTCGA 60.355 55.556 22.97 22.97 35.80 3.71
224 225 2.651137 TTTCGGAAGCGCGTTCGAC 61.651 57.895 26.36 0.00 35.80 4.20
225 226 3.827551 TTCGGAAGCGCGTTCGACA 62.828 57.895 26.36 14.44 35.80 4.35
226 227 3.399770 CGGAAGCGCGTTCGACAA 61.400 61.111 19.81 0.00 35.80 3.18
227 228 2.932905 GGAAGCGCGTTCGACAAA 59.067 55.556 8.43 0.00 35.80 2.83
228 229 1.277440 GGAAGCGCGTTCGACAAAA 59.723 52.632 8.43 0.00 35.80 2.44
229 230 0.316360 GGAAGCGCGTTCGACAAAAA 60.316 50.000 8.43 0.00 35.80 1.94
269 270 3.075998 GACGAGTGTCATGCAGCG 58.924 61.111 0.00 0.00 44.82 5.18
270 271 2.433145 ACGAGTGTCATGCAGCGG 60.433 61.111 0.00 0.00 32.49 5.52
271 272 2.125952 CGAGTGTCATGCAGCGGA 60.126 61.111 0.00 0.00 0.00 5.54
272 273 2.163390 CGAGTGTCATGCAGCGGAG 61.163 63.158 0.00 0.00 0.00 4.63
273 274 1.812922 GAGTGTCATGCAGCGGAGG 60.813 63.158 0.00 0.00 0.00 4.30
274 275 2.046892 GTGTCATGCAGCGGAGGT 60.047 61.111 0.00 0.00 41.48 3.85
295 296 4.203076 GGACGCGGCCACTACGAT 62.203 66.667 30.38 0.00 0.00 3.73
296 297 2.202703 GACGCGGCCACTACGATT 60.203 61.111 12.47 0.00 0.00 3.34
297 298 2.202703 ACGCGGCCACTACGATTC 60.203 61.111 12.47 0.00 0.00 2.52
298 299 3.320078 CGCGGCCACTACGATTCG 61.320 66.667 2.24 4.14 0.00 3.34
299 300 3.627218 GCGGCCACTACGATTCGC 61.627 66.667 2.24 0.00 36.51 4.70
300 301 2.960129 CGGCCACTACGATTCGCC 60.960 66.667 2.24 0.00 36.21 5.54
301 302 2.960129 GGCCACTACGATTCGCCG 60.960 66.667 5.86 0.00 0.00 6.46
302 303 2.960129 GCCACTACGATTCGCCGG 60.960 66.667 5.86 0.00 0.00 6.13
303 304 2.802792 CCACTACGATTCGCCGGA 59.197 61.111 5.05 0.00 0.00 5.14
304 305 1.362717 CCACTACGATTCGCCGGAT 59.637 57.895 5.05 0.00 0.00 4.18
305 306 0.939577 CCACTACGATTCGCCGGATG 60.940 60.000 5.05 0.00 0.00 3.51
306 307 0.030235 CACTACGATTCGCCGGATGA 59.970 55.000 5.05 0.00 0.00 2.92
307 308 0.030369 ACTACGATTCGCCGGATGAC 59.970 55.000 5.05 0.00 0.00 3.06
308 309 0.997226 CTACGATTCGCCGGATGACG 60.997 60.000 5.05 5.60 43.80 4.35
320 321 1.597663 CGGATGACGGTATGCTTTTCC 59.402 52.381 0.00 0.00 39.42 3.13
321 322 2.741878 CGGATGACGGTATGCTTTTCCT 60.742 50.000 0.00 0.00 39.42 3.36
322 323 3.279434 GGATGACGGTATGCTTTTCCTT 58.721 45.455 0.00 0.00 0.00 3.36
323 324 3.694566 GGATGACGGTATGCTTTTCCTTT 59.305 43.478 0.00 0.00 0.00 3.11
324 325 4.157840 GGATGACGGTATGCTTTTCCTTTT 59.842 41.667 0.00 0.00 0.00 2.27
325 326 5.336451 GGATGACGGTATGCTTTTCCTTTTT 60.336 40.000 0.00 0.00 0.00 1.94
348 349 7.556733 TTTTTATTAACACGCCCTATACCAG 57.443 36.000 0.00 0.00 0.00 4.00
349 350 5.874897 TTATTAACACGCCCTATACCAGT 57.125 39.130 0.00 0.00 0.00 4.00
350 351 6.975196 TTATTAACACGCCCTATACCAGTA 57.025 37.500 0.00 0.00 0.00 2.74
351 352 5.874897 ATTAACACGCCCTATACCAGTAA 57.125 39.130 0.00 0.00 0.00 2.24
352 353 5.674052 TTAACACGCCCTATACCAGTAAA 57.326 39.130 0.00 0.00 0.00 2.01
353 354 4.556592 AACACGCCCTATACCAGTAAAA 57.443 40.909 0.00 0.00 0.00 1.52
354 355 4.556592 ACACGCCCTATACCAGTAAAAA 57.443 40.909 0.00 0.00 0.00 1.94
355 356 5.106876 ACACGCCCTATACCAGTAAAAAT 57.893 39.130 0.00 0.00 0.00 1.82
356 357 5.503002 ACACGCCCTATACCAGTAAAAATT 58.497 37.500 0.00 0.00 0.00 1.82
357 358 5.947566 ACACGCCCTATACCAGTAAAAATTT 59.052 36.000 0.00 0.00 0.00 1.82
358 359 7.111466 ACACGCCCTATACCAGTAAAAATTTA 58.889 34.615 0.00 0.00 0.00 1.40
359 360 7.066163 ACACGCCCTATACCAGTAAAAATTTAC 59.934 37.037 7.77 7.77 42.50 2.01
360 361 6.258507 ACGCCCTATACCAGTAAAAATTTACG 59.741 38.462 9.68 5.92 45.77 3.18
361 362 6.479660 CGCCCTATACCAGTAAAAATTTACGA 59.520 38.462 9.68 0.00 45.77 3.43
362 363 7.011295 CGCCCTATACCAGTAAAAATTTACGAA 59.989 37.037 9.68 0.00 45.77 3.85
363 364 8.676401 GCCCTATACCAGTAAAAATTTACGAAA 58.324 33.333 9.68 0.00 45.77 3.46
376 377 9.715123 AAAAATTTACGAAAAAGGAATTGCTTG 57.285 25.926 13.40 3.20 0.00 4.01
377 378 7.420184 AATTTACGAAAAAGGAATTGCTTGG 57.580 32.000 13.40 5.97 0.00 3.61
378 379 3.385193 ACGAAAAAGGAATTGCTTGGG 57.615 42.857 13.40 5.64 0.00 4.12
379 380 2.037121 ACGAAAAAGGAATTGCTTGGGG 59.963 45.455 13.40 5.96 0.00 4.96
380 381 2.037121 CGAAAAAGGAATTGCTTGGGGT 59.963 45.455 13.40 0.00 0.00 4.95
381 382 3.494223 CGAAAAAGGAATTGCTTGGGGTT 60.494 43.478 13.40 5.57 0.00 4.11
382 383 3.490439 AAAAGGAATTGCTTGGGGTTG 57.510 42.857 13.40 0.00 0.00 3.77
383 384 0.686789 AAGGAATTGCTTGGGGTTGC 59.313 50.000 11.84 0.00 0.00 4.17
384 385 0.178924 AGGAATTGCTTGGGGTTGCT 60.179 50.000 0.00 0.00 0.00 3.91
385 386 0.247460 GGAATTGCTTGGGGTTGCTC 59.753 55.000 0.00 0.00 0.00 4.26
386 387 1.260544 GAATTGCTTGGGGTTGCTCT 58.739 50.000 0.00 0.00 0.00 4.09
387 388 1.620323 GAATTGCTTGGGGTTGCTCTT 59.380 47.619 0.00 0.00 0.00 2.85
388 389 1.720781 ATTGCTTGGGGTTGCTCTTT 58.279 45.000 0.00 0.00 0.00 2.52
389 390 2.373335 TTGCTTGGGGTTGCTCTTTA 57.627 45.000 0.00 0.00 0.00 1.85
390 391 2.603075 TGCTTGGGGTTGCTCTTTAT 57.397 45.000 0.00 0.00 0.00 1.40
391 392 2.888212 TGCTTGGGGTTGCTCTTTATT 58.112 42.857 0.00 0.00 0.00 1.40
392 393 2.825532 TGCTTGGGGTTGCTCTTTATTC 59.174 45.455 0.00 0.00 0.00 1.75
393 394 2.825532 GCTTGGGGTTGCTCTTTATTCA 59.174 45.455 0.00 0.00 0.00 2.57
394 395 3.367395 GCTTGGGGTTGCTCTTTATTCAC 60.367 47.826 0.00 0.00 0.00 3.18
395 396 3.517296 TGGGGTTGCTCTTTATTCACA 57.483 42.857 0.00 0.00 0.00 3.58
396 397 3.153919 TGGGGTTGCTCTTTATTCACAC 58.846 45.455 0.00 0.00 0.00 3.82
397 398 2.492088 GGGGTTGCTCTTTATTCACACC 59.508 50.000 0.00 0.00 0.00 4.16
398 399 2.492088 GGGTTGCTCTTTATTCACACCC 59.508 50.000 0.00 0.00 0.00 4.61
399 400 2.161609 GGTTGCTCTTTATTCACACCCG 59.838 50.000 0.00 0.00 0.00 5.28
400 401 3.071479 GTTGCTCTTTATTCACACCCGA 58.929 45.455 0.00 0.00 0.00 5.14
401 402 2.972625 TGCTCTTTATTCACACCCGAG 58.027 47.619 0.00 0.00 0.00 4.63
402 403 2.565391 TGCTCTTTATTCACACCCGAGA 59.435 45.455 0.00 0.00 0.00 4.04
403 404 3.007506 TGCTCTTTATTCACACCCGAGAA 59.992 43.478 0.00 0.00 0.00 2.87
404 405 4.192317 GCTCTTTATTCACACCCGAGAAT 58.808 43.478 0.00 0.00 36.55 2.40
405 406 4.271291 GCTCTTTATTCACACCCGAGAATC 59.729 45.833 0.00 0.00 34.70 2.52
406 407 5.414789 TCTTTATTCACACCCGAGAATCA 57.585 39.130 0.00 0.00 34.70 2.57
407 408 5.800296 TCTTTATTCACACCCGAGAATCAA 58.200 37.500 0.00 0.00 34.70 2.57
408 409 6.234920 TCTTTATTCACACCCGAGAATCAAA 58.765 36.000 0.00 0.00 34.70 2.69
409 410 6.371548 TCTTTATTCACACCCGAGAATCAAAG 59.628 38.462 0.00 0.00 34.70 2.77
410 411 3.762407 TTCACACCCGAGAATCAAAGA 57.238 42.857 0.00 0.00 33.17 2.52
411 412 3.762407 TCACACCCGAGAATCAAAGAA 57.238 42.857 0.00 0.00 33.17 2.52
412 413 4.079980 TCACACCCGAGAATCAAAGAAA 57.920 40.909 0.00 0.00 33.17 2.52
413 414 4.456535 TCACACCCGAGAATCAAAGAAAA 58.543 39.130 0.00 0.00 33.17 2.29
414 415 4.515191 TCACACCCGAGAATCAAAGAAAAG 59.485 41.667 0.00 0.00 33.17 2.27
415 416 4.515191 CACACCCGAGAATCAAAGAAAAGA 59.485 41.667 0.00 0.00 33.17 2.52
416 417 5.008613 CACACCCGAGAATCAAAGAAAAGAA 59.991 40.000 0.00 0.00 33.17 2.52
417 418 5.239525 ACACCCGAGAATCAAAGAAAAGAAG 59.760 40.000 0.00 0.00 33.17 2.85
418 419 5.470098 CACCCGAGAATCAAAGAAAAGAAGA 59.530 40.000 0.00 0.00 33.17 2.87
419 420 5.703130 ACCCGAGAATCAAAGAAAAGAAGAG 59.297 40.000 0.00 0.00 33.17 2.85
420 421 5.934625 CCCGAGAATCAAAGAAAAGAAGAGA 59.065 40.000 0.00 0.00 33.17 3.10
421 422 6.428159 CCCGAGAATCAAAGAAAAGAAGAGAA 59.572 38.462 0.00 0.00 33.17 2.87
422 423 7.120432 CCCGAGAATCAAAGAAAAGAAGAGAAT 59.880 37.037 0.00 0.00 33.17 2.40
423 424 9.155975 CCGAGAATCAAAGAAAAGAAGAGAATA 57.844 33.333 0.00 0.00 33.17 1.75
438 439 9.525826 AAGAAGAGAATATTTCAAAGGATGTGT 57.474 29.630 0.00 0.00 0.00 3.72
439 440 9.525826 AGAAGAGAATATTTCAAAGGATGTGTT 57.474 29.630 0.00 0.00 0.00 3.32
444 445 8.971073 AGAATATTTCAAAGGATGTGTTTAGGG 58.029 33.333 0.00 0.00 0.00 3.53
445 446 4.864704 TTTCAAAGGATGTGTTTAGGGC 57.135 40.909 0.00 0.00 0.00 5.19
446 447 3.517296 TCAAAGGATGTGTTTAGGGCA 57.483 42.857 0.00 0.00 0.00 5.36
447 448 4.046286 TCAAAGGATGTGTTTAGGGCAT 57.954 40.909 0.00 0.00 0.00 4.40
448 449 5.186256 TCAAAGGATGTGTTTAGGGCATA 57.814 39.130 0.00 0.00 0.00 3.14
449 450 5.765510 TCAAAGGATGTGTTTAGGGCATAT 58.234 37.500 0.00 0.00 0.00 1.78
450 451 5.827797 TCAAAGGATGTGTTTAGGGCATATC 59.172 40.000 0.00 0.00 34.90 1.63
451 452 5.653255 AAGGATGTGTTTAGGGCATATCT 57.347 39.130 0.00 0.00 35.63 1.98
452 453 6.763715 AAGGATGTGTTTAGGGCATATCTA 57.236 37.500 0.00 0.00 35.63 1.98
453 454 6.365970 AGGATGTGTTTAGGGCATATCTAG 57.634 41.667 0.00 0.00 35.63 2.43
454 455 6.084738 AGGATGTGTTTAGGGCATATCTAGA 58.915 40.000 0.00 0.00 35.63 2.43
455 456 6.732862 AGGATGTGTTTAGGGCATATCTAGAT 59.267 38.462 10.73 10.73 35.63 1.98
456 457 6.820656 GGATGTGTTTAGGGCATATCTAGATG 59.179 42.308 15.79 2.00 35.63 2.90
457 458 6.747414 TGTGTTTAGGGCATATCTAGATGT 57.253 37.500 15.79 5.75 0.00 3.06
458 459 6.524734 TGTGTTTAGGGCATATCTAGATGTG 58.475 40.000 21.61 21.61 33.70 3.21
482 483 8.593492 TGCTATAGTTATTGCACATCTAAGTG 57.407 34.615 0.84 0.00 38.99 3.16
483 484 8.421002 TGCTATAGTTATTGCACATCTAAGTGA 58.579 33.333 0.84 0.00 42.05 3.41
484 485 8.920665 GCTATAGTTATTGCACATCTAAGTGAG 58.079 37.037 0.84 0.00 42.05 3.51
485 486 9.973450 CTATAGTTATTGCACATCTAAGTGAGT 57.027 33.333 0.00 0.00 42.05 3.41
486 487 6.974932 AGTTATTGCACATCTAAGTGAGTG 57.025 37.500 0.00 0.00 42.05 3.51
487 488 6.701340 AGTTATTGCACATCTAAGTGAGTGA 58.299 36.000 0.00 0.00 42.05 3.41
488 489 7.161404 AGTTATTGCACATCTAAGTGAGTGAA 58.839 34.615 0.00 0.00 42.05 3.18
489 490 7.826252 AGTTATTGCACATCTAAGTGAGTGAAT 59.174 33.333 0.00 0.00 42.05 2.57
490 491 8.454106 GTTATTGCACATCTAAGTGAGTGAATT 58.546 33.333 0.00 0.00 42.05 2.17
491 492 9.665719 TTATTGCACATCTAAGTGAGTGAATTA 57.334 29.630 0.00 0.00 42.05 1.40
492 493 7.977789 TTGCACATCTAAGTGAGTGAATTAA 57.022 32.000 0.00 0.00 42.05 1.40
493 494 7.601073 TGCACATCTAAGTGAGTGAATTAAG 57.399 36.000 0.00 0.00 42.05 1.85
494 495 7.161404 TGCACATCTAAGTGAGTGAATTAAGT 58.839 34.615 0.00 0.00 42.05 2.24
495 496 8.311109 TGCACATCTAAGTGAGTGAATTAAGTA 58.689 33.333 0.00 0.00 42.05 2.24
496 497 9.319143 GCACATCTAAGTGAGTGAATTAAGTAT 57.681 33.333 0.00 0.00 42.05 2.12
540 541 9.676861 AATCACATGAATCTCAACTTAAGATCA 57.323 29.630 10.09 2.61 32.29 2.92
541 542 9.676861 ATCACATGAATCTCAACTTAAGATCAA 57.323 29.630 10.09 0.00 32.29 2.57
542 543 9.676861 TCACATGAATCTCAACTTAAGATCAAT 57.323 29.630 10.09 0.00 32.29 2.57
543 544 9.717892 CACATGAATCTCAACTTAAGATCAATG 57.282 33.333 10.09 2.78 34.87 2.82
544 545 9.676861 ACATGAATCTCAACTTAAGATCAATGA 57.323 29.630 10.09 4.79 33.92 2.57
612 613 8.574196 GCTTTAGCAAAACTGTATTTCAAAGA 57.426 30.769 0.00 0.00 41.59 2.52
613 614 8.694394 GCTTTAGCAAAACTGTATTTCAAAGAG 58.306 33.333 0.00 0.00 41.59 2.85
614 615 9.950680 CTTTAGCAAAACTGTATTTCAAAGAGA 57.049 29.630 0.00 0.00 0.00 3.10
615 616 9.950680 TTTAGCAAAACTGTATTTCAAAGAGAG 57.049 29.630 0.00 0.00 0.00 3.20
616 617 7.807977 AGCAAAACTGTATTTCAAAGAGAGA 57.192 32.000 0.00 0.00 0.00 3.10
617 618 7.869800 AGCAAAACTGTATTTCAAAGAGAGAG 58.130 34.615 0.00 0.00 0.00 3.20
618 619 7.716998 AGCAAAACTGTATTTCAAAGAGAGAGA 59.283 33.333 0.00 0.00 0.00 3.10
619 620 8.345565 GCAAAACTGTATTTCAAAGAGAGAGAA 58.654 33.333 0.00 0.00 0.00 2.87
645 646 9.987272 AAAAAGAGAAAAGGAAAATCTACATGG 57.013 29.630 0.00 0.00 0.00 3.66
646 647 7.709149 AAGAGAAAAGGAAAATCTACATGGG 57.291 36.000 0.00 0.00 0.00 4.00
647 648 6.794534 AGAGAAAAGGAAAATCTACATGGGT 58.205 36.000 0.00 0.00 0.00 4.51
648 649 6.887002 AGAGAAAAGGAAAATCTACATGGGTC 59.113 38.462 0.00 0.00 0.00 4.46
649 650 6.552008 AGAAAAGGAAAATCTACATGGGTCA 58.448 36.000 0.00 0.00 0.00 4.02
650 651 6.434340 AGAAAAGGAAAATCTACATGGGTCAC 59.566 38.462 0.00 0.00 0.00 3.67
651 652 4.236527 AGGAAAATCTACATGGGTCACC 57.763 45.455 0.00 0.00 37.24 4.02
652 653 3.053619 AGGAAAATCTACATGGGTCACCC 60.054 47.826 5.63 5.63 45.71 4.61
667 668 3.087065 CCCAAATCAGGGGTCGGT 58.913 61.111 0.00 0.00 45.60 4.69
668 669 1.378514 CCCAAATCAGGGGTCGGTG 60.379 63.158 0.00 0.00 45.60 4.94
669 670 2.046285 CCAAATCAGGGGTCGGTGC 61.046 63.158 0.00 0.00 0.00 5.01
670 671 2.046285 CAAATCAGGGGTCGGTGCC 61.046 63.158 0.00 0.00 0.00 5.01
671 672 2.534396 AAATCAGGGGTCGGTGCCA 61.534 57.895 0.00 0.00 0.00 4.92
672 673 2.764637 AAATCAGGGGTCGGTGCCAC 62.765 60.000 0.00 0.00 0.00 5.01
706 707 2.200373 CCCCCATAATTTAGCTCGGG 57.800 55.000 0.00 0.00 0.00 5.14
708 709 2.951229 CCCATAATTTAGCTCGGGGT 57.049 50.000 0.00 0.00 0.00 4.95
709 710 2.779506 CCCATAATTTAGCTCGGGGTC 58.220 52.381 0.00 0.00 0.00 4.46
710 711 2.372172 CCCATAATTTAGCTCGGGGTCT 59.628 50.000 0.00 0.00 0.00 3.85
711 712 3.181443 CCCATAATTTAGCTCGGGGTCTT 60.181 47.826 0.00 0.00 0.00 3.01
712 713 3.815401 CCATAATTTAGCTCGGGGTCTTG 59.185 47.826 0.00 0.00 0.00 3.02
713 714 1.751437 AATTTAGCTCGGGGTCTTGC 58.249 50.000 0.00 0.00 0.00 4.01
714 715 0.912486 ATTTAGCTCGGGGTCTTGCT 59.088 50.000 0.00 0.00 39.30 3.91
715 716 0.036388 TTTAGCTCGGGGTCTTGCTG 60.036 55.000 0.00 0.00 37.02 4.41
716 717 1.899437 TTAGCTCGGGGTCTTGCTGG 61.899 60.000 0.00 0.00 37.02 4.85
834 835 4.273005 ACGCCGTTGTCAATAATTCATC 57.727 40.909 0.00 0.00 0.00 2.92
920 922 3.827898 CTCCTCTCGCCGTCACCC 61.828 72.222 0.00 0.00 0.00 4.61
952 954 4.875544 TCTCTATAAATTGTTGCACCGC 57.124 40.909 0.00 0.00 0.00 5.68
1098 1103 2.432628 GCGCTGTACAAGGACGCT 60.433 61.111 19.08 0.00 45.71 5.07
1159 1164 4.116328 TGACGCTCGCGGAGAAGG 62.116 66.667 16.18 0.00 44.69 3.46
1362 1367 1.008881 GATCTACGGCATCGACGCA 60.009 57.895 5.59 0.00 37.73 5.24
1549 1554 4.691216 ACTAAAATCTCCGAGCAACACTTC 59.309 41.667 0.00 0.00 0.00 3.01
1558 1577 3.365364 CCGAGCAACACTTCCTGAATTTC 60.365 47.826 0.00 0.00 0.00 2.17
1590 1610 0.891373 CCGACACCATCACTCACTCT 59.109 55.000 0.00 0.00 0.00 3.24
1591 1611 1.403382 CCGACACCATCACTCACTCTG 60.403 57.143 0.00 0.00 0.00 3.35
1599 1619 3.573598 CATCACTCACTCTGTCACTCAC 58.426 50.000 0.00 0.00 0.00 3.51
1603 1623 0.676184 TCACTCTGTCACTCACCTGC 59.324 55.000 0.00 0.00 0.00 4.85
1605 1625 0.678395 ACTCTGTCACTCACCTGCTG 59.322 55.000 0.00 0.00 0.00 4.41
1606 1626 0.037512 CTCTGTCACTCACCTGCTGG 60.038 60.000 8.29 8.29 39.83 4.85
1623 1651 0.394762 TGGCTGCTGCTTCCCTTATG 60.395 55.000 15.64 0.00 39.59 1.90
1798 1829 4.392921 AGTAAGATCCAGTCCATCAACG 57.607 45.455 0.00 0.00 0.00 4.10
2071 2110 0.323302 TGCACGCCAACCAAGATCTA 59.677 50.000 0.00 0.00 0.00 1.98
2147 2186 1.967319 ATTGCACTCGTGGTGTTCTT 58.033 45.000 11.43 0.00 46.86 2.52
2148 2187 1.013596 TTGCACTCGTGGTGTTCTTG 58.986 50.000 11.43 0.00 46.86 3.02
2149 2188 0.107897 TGCACTCGTGGTGTTCTTGT 60.108 50.000 11.43 0.00 46.86 3.16
2150 2189 1.137282 TGCACTCGTGGTGTTCTTGTA 59.863 47.619 11.43 0.00 46.86 2.41
2151 2190 1.525619 GCACTCGTGGTGTTCTTGTAC 59.474 52.381 11.43 0.00 46.86 2.90
2152 2191 1.784856 CACTCGTGGTGTTCTTGTACG 59.215 52.381 0.00 0.00 40.79 3.67
2153 2192 0.782384 CTCGTGGTGTTCTTGTACGC 59.218 55.000 0.00 0.00 34.98 4.42
2165 2204 4.002906 TCTTGTACGCTCAAATTCAGGT 57.997 40.909 0.00 0.00 0.00 4.00
2166 2205 3.745975 TCTTGTACGCTCAAATTCAGGTG 59.254 43.478 0.00 0.00 0.00 4.00
2167 2206 3.120321 TGTACGCTCAAATTCAGGTGT 57.880 42.857 0.00 0.00 0.00 4.16
2168 2207 3.472652 TGTACGCTCAAATTCAGGTGTT 58.527 40.909 0.00 0.00 0.00 3.32
2169 2208 3.496884 TGTACGCTCAAATTCAGGTGTTC 59.503 43.478 0.00 0.00 0.00 3.18
2349 2412 0.961019 GCCTTGACATGGTGAGCAAA 59.039 50.000 9.01 0.00 0.00 3.68
2367 2430 4.949856 AGCAAAACTTTCTTCTCTGTGGAA 59.050 37.500 0.00 0.00 0.00 3.53
2368 2431 5.418840 AGCAAAACTTTCTTCTCTGTGGAAA 59.581 36.000 0.00 0.00 0.00 3.13
2372 2435 7.703058 AAACTTTCTTCTCTGTGGAAAAAGA 57.297 32.000 0.00 0.00 0.00 2.52
2373 2436 7.888250 AACTTTCTTCTCTGTGGAAAAAGAT 57.112 32.000 0.00 0.00 0.00 2.40
2374 2437 7.888250 ACTTTCTTCTCTGTGGAAAAAGATT 57.112 32.000 0.00 0.00 0.00 2.40
2376 2439 7.340487 ACTTTCTTCTCTGTGGAAAAAGATTGT 59.660 33.333 0.00 0.00 0.00 2.71
2377 2440 6.624352 TCTTCTCTGTGGAAAAAGATTGTG 57.376 37.500 0.00 0.00 0.00 3.33
2379 2442 6.260936 TCTTCTCTGTGGAAAAAGATTGTGTC 59.739 38.462 0.00 0.00 0.00 3.67
2391 2457 8.908786 AAAAAGATTGTGTCTCTCTGTGAATA 57.091 30.769 0.00 0.00 35.67 1.75
2420 2502 3.125829 TGCTTGCTGAGATCGATGTTTTC 59.874 43.478 0.54 0.00 0.00 2.29
2630 2718 4.921834 GCAGGTGCTCTACTGACC 57.078 61.111 0.00 0.00 36.86 4.02
2649 2740 1.645034 CGATGAAACTCTGATGCCGT 58.355 50.000 0.00 0.00 0.00 5.68
2663 2754 5.879777 TCTGATGCCGTATTCTGAAATTTGA 59.120 36.000 0.00 0.00 0.00 2.69
2664 2755 6.037500 TCTGATGCCGTATTCTGAAATTTGAG 59.962 38.462 0.00 0.00 0.00 3.02
2686 2777 5.730550 AGTTCAGTTATGATTTGCTACCGA 58.269 37.500 0.00 0.00 34.73 4.69
2692 2783 7.335673 TCAGTTATGATTTGCTACCGAATTCAA 59.664 33.333 6.22 0.00 0.00 2.69
2694 2785 8.519526 AGTTATGATTTGCTACCGAATTCAAAA 58.480 29.630 6.22 0.00 32.97 2.44
2695 2786 9.134734 GTTATGATTTGCTACCGAATTCAAAAA 57.865 29.630 6.22 0.00 32.97 1.94
2696 2787 9.868277 TTATGATTTGCTACCGAATTCAAAAAT 57.132 25.926 6.22 2.22 32.97 1.82
2698 2789 7.151308 TGATTTGCTACCGAATTCAAAAATGT 58.849 30.769 6.22 0.00 32.97 2.71
2699 2790 7.655328 TGATTTGCTACCGAATTCAAAAATGTT 59.345 29.630 6.22 0.00 32.97 2.71
2700 2791 6.761731 TTGCTACCGAATTCAAAAATGTTG 57.238 33.333 6.22 0.00 0.00 3.33
2701 2792 4.683781 TGCTACCGAATTCAAAAATGTTGC 59.316 37.500 6.22 5.71 0.00 4.17
2702 2793 4.923281 GCTACCGAATTCAAAAATGTTGCT 59.077 37.500 6.22 0.00 0.00 3.91
2703 2794 5.405269 GCTACCGAATTCAAAAATGTTGCTT 59.595 36.000 6.22 0.00 0.00 3.91
2704 2795 5.905480 ACCGAATTCAAAAATGTTGCTTC 57.095 34.783 6.22 0.00 0.00 3.86
2705 2796 5.355596 ACCGAATTCAAAAATGTTGCTTCA 58.644 33.333 6.22 0.00 0.00 3.02
2706 2797 5.234116 ACCGAATTCAAAAATGTTGCTTCAC 59.766 36.000 6.22 0.00 0.00 3.18
3490 3595 4.139420 CGGTCAAGAAGCGCGCAG 62.139 66.667 35.10 16.90 42.62 5.18
3492 3597 2.734673 GGTCAAGAAGCGCGCAGAG 61.735 63.158 35.10 17.64 0.00 3.35
3546 3658 3.031417 ATGGCTCTACCGTGGCACC 62.031 63.158 12.86 0.00 43.94 5.01
3581 3693 7.065324 TGCCATTCTTTATAGAACAAGTTACCG 59.935 37.037 0.00 0.00 42.91 4.02
3717 3832 8.671921 GGCAAATGTATCCTCACTATTATGATG 58.328 37.037 0.00 0.00 0.00 3.07
3867 4148 9.780186 AACTTAGGATCCTATATTGTTACAAGC 57.220 33.333 22.30 0.00 0.00 4.01
3912 4194 4.660789 CTCCATGGAGCCCTTTATTTTG 57.339 45.455 28.45 1.40 35.31 2.44
3913 4195 4.280819 CTCCATGGAGCCCTTTATTTTGA 58.719 43.478 28.45 0.00 35.31 2.69
3914 4196 4.682563 TCCATGGAGCCCTTTATTTTGAA 58.317 39.130 11.44 0.00 0.00 2.69
3915 4197 5.090139 TCCATGGAGCCCTTTATTTTGAAA 58.910 37.500 11.44 0.00 0.00 2.69
3917 4199 6.215227 TCCATGGAGCCCTTTATTTTGAAAAT 59.785 34.615 11.44 8.35 0.00 1.82
3918 4200 6.885918 CCATGGAGCCCTTTATTTTGAAAATT 59.114 34.615 5.56 0.00 0.00 1.82
3919 4201 7.148205 CCATGGAGCCCTTTATTTTGAAAATTG 60.148 37.037 5.56 0.60 0.00 2.32
3920 4202 7.072263 TGGAGCCCTTTATTTTGAAAATTGA 57.928 32.000 8.60 0.00 0.00 2.57
3921 4203 7.512992 TGGAGCCCTTTATTTTGAAAATTGAA 58.487 30.769 8.60 4.14 0.00 2.69
3950 5381 7.687941 TCTCATTCTCAAGTTCCATAAAACC 57.312 36.000 0.00 0.00 0.00 3.27
3983 5414 8.260114 AGATCACACACATTCATACAGATGTAA 58.740 33.333 0.00 0.00 34.41 2.41
4030 5518 9.311916 GAAGATGATATACATTATGGTCAGAGC 57.688 37.037 0.00 0.00 39.56 4.09
4031 5519 8.606754 AGATGATATACATTATGGTCAGAGCT 57.393 34.615 0.38 0.00 39.56 4.09
4032 5520 9.706529 AGATGATATACATTATGGTCAGAGCTA 57.293 33.333 0.38 0.00 39.56 3.32
4033 5521 9.743057 GATGATATACATTATGGTCAGAGCTAC 57.257 37.037 0.38 0.00 39.56 3.58
4034 5522 8.650143 TGATATACATTATGGTCAGAGCTACA 57.350 34.615 0.38 0.00 0.00 2.74
4035 5523 9.088987 TGATATACATTATGGTCAGAGCTACAA 57.911 33.333 0.38 0.00 0.00 2.41
4036 5524 9.929180 GATATACATTATGGTCAGAGCTACAAA 57.071 33.333 0.38 0.00 0.00 2.83
4059 5547 6.700845 AAAAGGGGGAAATCATGATTTTCA 57.299 33.333 31.40 0.00 40.77 2.69
4060 5548 6.700845 AAAGGGGGAAATCATGATTTTCAA 57.299 33.333 31.40 0.00 40.77 2.69
4061 5549 6.700845 AAGGGGGAAATCATGATTTTCAAA 57.299 33.333 31.40 0.00 40.77 2.69
4062 5550 6.896452 AGGGGGAAATCATGATTTTCAAAT 57.104 33.333 31.40 18.12 40.77 2.32
4063 5551 6.655930 AGGGGGAAATCATGATTTTCAAATG 58.344 36.000 31.40 0.00 40.77 2.32
4064 5552 6.444493 AGGGGGAAATCATGATTTTCAAATGA 59.556 34.615 31.40 0.00 40.77 2.57
4065 5553 7.128263 AGGGGGAAATCATGATTTTCAAATGAT 59.872 33.333 31.40 14.21 41.64 2.45
4066 5554 7.227910 GGGGGAAATCATGATTTTCAAATGATG 59.772 37.037 31.40 5.60 39.53 3.07
4068 5556 9.386010 GGGAAATCATGATTTTCAAATGATGAA 57.614 29.630 31.40 3.58 46.70 2.57
4072 5560 9.938280 AATCATGATTTTCAAATGATGAACAGT 57.062 25.926 15.36 0.78 46.70 3.55
4079 5567 6.572167 TTCAAATGATGAACAGTACATGCA 57.428 33.333 0.00 0.00 43.08 3.96
4080 5568 5.941733 TCAAATGATGAACAGTACATGCAC 58.058 37.500 0.00 0.00 34.30 4.57
4081 5569 5.706833 TCAAATGATGAACAGTACATGCACT 59.293 36.000 0.00 0.00 34.30 4.40
4082 5570 6.348704 TCAAATGATGAACAGTACATGCACTG 60.349 38.462 22.10 22.10 41.52 3.66
4147 5635 8.043113 GCTCTCACCATAATGTATTCCATCATA 58.957 37.037 0.00 0.00 31.75 2.15
4230 5723 9.442047 TGACACTTAAAAATGTGTTTTCCAATT 57.558 25.926 0.00 0.00 45.94 2.32
4278 5771 4.416601 CTCCCTCCCGACCCCCTT 62.417 72.222 0.00 0.00 0.00 3.95
4279 5772 4.410033 TCCCTCCCGACCCCCTTC 62.410 72.222 0.00 0.00 0.00 3.46
4281 5774 4.416601 CCTCCCGACCCCCTTCCT 62.417 72.222 0.00 0.00 0.00 3.36
4282 5775 2.285442 CTCCCGACCCCCTTCCTT 60.285 66.667 0.00 0.00 0.00 3.36
4283 5776 1.923909 CTCCCGACCCCCTTCCTTT 60.924 63.158 0.00 0.00 0.00 3.11
4284 5777 1.911702 CTCCCGACCCCCTTCCTTTC 61.912 65.000 0.00 0.00 0.00 2.62
4285 5778 2.267961 CCGACCCCCTTCCTTTCG 59.732 66.667 0.00 0.00 0.00 3.46
4286 5779 2.288025 CCGACCCCCTTCCTTTCGA 61.288 63.158 0.00 0.00 0.00 3.71
4416 5909 4.496336 GCTTCCTCCGCCATGGCT 62.496 66.667 33.07 0.00 39.32 4.75
4417 5910 2.203126 CTTCCTCCGCCATGGCTC 60.203 66.667 33.07 7.26 39.32 4.70
4418 5911 3.764160 CTTCCTCCGCCATGGCTCC 62.764 68.421 33.07 6.46 39.32 4.70
4426 5919 3.716195 CCATGGCTCCGGGACACA 61.716 66.667 0.00 0.00 34.73 3.72
4427 5920 2.124983 CATGGCTCCGGGACACAG 60.125 66.667 0.00 0.00 34.73 3.66
4428 5921 2.607750 ATGGCTCCGGGACACAGT 60.608 61.111 0.00 0.00 34.73 3.55
4429 5922 2.660064 ATGGCTCCGGGACACAGTC 61.660 63.158 0.00 0.00 34.73 3.51
4430 5923 4.436998 GGCTCCGGGACACAGTCG 62.437 72.222 0.00 0.00 32.65 4.18
4437 5930 3.986006 GGACACAGTCGCGGTGGA 61.986 66.667 16.52 0.00 40.54 4.02
4438 5931 2.430921 GACACAGTCGCGGTGGAG 60.431 66.667 16.52 9.73 40.54 3.86
4439 5932 2.910479 ACACAGTCGCGGTGGAGA 60.910 61.111 16.52 0.00 40.54 3.71
4440 5933 2.214181 GACACAGTCGCGGTGGAGAT 62.214 60.000 16.52 0.00 40.54 2.75
4441 5934 1.517257 CACAGTCGCGGTGGAGATC 60.517 63.158 6.13 0.00 32.65 2.75
4442 5935 2.105128 CAGTCGCGGTGGAGATCC 59.895 66.667 6.13 0.00 0.00 3.36
4450 5943 2.982130 GTGGAGATCCGCACAGGT 59.018 61.111 7.56 0.00 45.55 4.00
4451 5944 1.448540 GTGGAGATCCGCACAGGTG 60.449 63.158 7.56 0.00 45.55 4.00
4452 5945 1.913262 TGGAGATCCGCACAGGTGT 60.913 57.895 0.91 0.00 41.99 4.16
4453 5946 1.153549 GGAGATCCGCACAGGTGTC 60.154 63.158 0.91 0.00 41.99 3.67
4454 5947 1.153549 GAGATCCGCACAGGTGTCC 60.154 63.158 0.91 0.00 41.99 4.02
4455 5948 1.608717 GAGATCCGCACAGGTGTCCT 61.609 60.000 0.91 0.00 41.99 3.85
4464 5957 3.048602 AGGTGTCCTGGTTCGACG 58.951 61.111 0.00 0.00 32.68 5.12
4465 5958 1.831286 AGGTGTCCTGGTTCGACGT 60.831 57.895 0.00 0.00 32.68 4.34
4466 5959 1.663702 GGTGTCCTGGTTCGACGTG 60.664 63.158 0.00 0.00 32.68 4.49
4467 5960 1.066918 GTGTCCTGGTTCGACGTGT 59.933 57.895 0.00 0.00 32.68 4.49
4468 5961 1.066752 TGTCCTGGTTCGACGTGTG 59.933 57.895 0.00 0.00 32.68 3.82
4469 5962 2.028484 TCCTGGTTCGACGTGTGC 59.972 61.111 0.00 0.00 0.00 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.759489 AACAAGACCTATGTTGCAGAAATAA 57.241 32.000 0.00 0.00 39.43 1.40
10 11 6.655078 AAATTCTGCAACAAGACCTATGTT 57.345 33.333 0.00 0.00 41.50 2.71
11 12 6.040842 ACAAAATTCTGCAACAAGACCTATGT 59.959 34.615 0.00 0.00 0.00 2.29
12 13 6.449698 ACAAAATTCTGCAACAAGACCTATG 58.550 36.000 0.00 0.00 0.00 2.23
13 14 6.655078 ACAAAATTCTGCAACAAGACCTAT 57.345 33.333 0.00 0.00 0.00 2.57
14 15 6.272318 CAACAAAATTCTGCAACAAGACCTA 58.728 36.000 0.00 0.00 0.00 3.08
15 16 5.111293 CAACAAAATTCTGCAACAAGACCT 58.889 37.500 0.00 0.00 0.00 3.85
16 17 4.260334 GCAACAAAATTCTGCAACAAGACC 60.260 41.667 0.00 0.00 36.09 3.85
17 18 4.329528 TGCAACAAAATTCTGCAACAAGAC 59.670 37.500 0.00 0.00 42.84 3.01
18 19 4.502016 TGCAACAAAATTCTGCAACAAGA 58.498 34.783 0.00 0.00 42.84 3.02
19 20 4.861389 TGCAACAAAATTCTGCAACAAG 57.139 36.364 0.00 0.00 42.84 3.16
24 25 2.200067 CCGTTGCAACAAAATTCTGCA 58.800 42.857 28.01 0.00 44.04 4.41
25 26 2.200899 ACCGTTGCAACAAAATTCTGC 58.799 42.857 28.01 0.00 36.60 4.26
26 27 3.616379 ACAACCGTTGCAACAAAATTCTG 59.384 39.130 28.01 16.07 0.00 3.02
27 28 3.855858 ACAACCGTTGCAACAAAATTCT 58.144 36.364 28.01 2.70 0.00 2.40
28 29 4.591998 AACAACCGTTGCAACAAAATTC 57.408 36.364 28.01 0.44 32.81 2.17
29 30 5.363979 AAAACAACCGTTGCAACAAAATT 57.636 30.435 28.01 13.42 34.86 1.82
30 31 6.508721 CGATAAAACAACCGTTGCAACAAAAT 60.509 34.615 28.01 9.14 34.86 1.82
31 32 5.220228 CGATAAAACAACCGTTGCAACAAAA 60.220 36.000 28.01 4.20 34.86 2.44
32 33 4.265556 CGATAAAACAACCGTTGCAACAAA 59.734 37.500 28.01 3.73 34.86 2.83
33 34 3.791887 CGATAAAACAACCGTTGCAACAA 59.208 39.130 28.01 3.22 34.86 2.83
34 35 3.364062 CGATAAAACAACCGTTGCAACA 58.636 40.909 28.01 6.65 34.86 3.33
35 36 2.152301 GCGATAAAACAACCGTTGCAAC 59.848 45.455 19.89 19.89 34.86 4.17
36 37 2.386249 GCGATAAAACAACCGTTGCAA 58.614 42.857 11.29 0.00 34.86 4.08
37 38 1.660614 CGCGATAAAACAACCGTTGCA 60.661 47.619 11.29 0.00 34.86 4.08
38 39 0.972013 CGCGATAAAACAACCGTTGC 59.028 50.000 11.29 0.00 34.86 4.17
39 40 2.580729 TCGCGATAAAACAACCGTTG 57.419 45.000 3.71 9.80 34.86 4.10
40 41 3.605743 TTTCGCGATAAAACAACCGTT 57.394 38.095 10.88 0.00 36.73 4.44
41 42 3.605743 TTTTCGCGATAAAACAACCGT 57.394 38.095 10.88 0.00 0.00 4.83
60 61 8.661257 GCAACAAAACCTAGTTGTAATGTTTTT 58.339 29.630 7.08 0.00 45.16 1.94
61 62 7.819900 TGCAACAAAACCTAGTTGTAATGTTTT 59.180 29.630 7.08 0.00 45.16 2.43
62 63 7.324178 TGCAACAAAACCTAGTTGTAATGTTT 58.676 30.769 7.08 0.00 45.16 2.83
63 64 6.868622 TGCAACAAAACCTAGTTGTAATGTT 58.131 32.000 7.08 0.00 45.16 2.71
64 65 6.458232 TGCAACAAAACCTAGTTGTAATGT 57.542 33.333 7.08 0.00 45.16 2.71
68 69 8.779354 AAAAATTGCAACAAAACCTAGTTGTA 57.221 26.923 0.00 0.11 45.16 2.41
69 70 7.680442 AAAAATTGCAACAAAACCTAGTTGT 57.320 28.000 0.00 0.00 45.16 3.32
90 91 3.509575 ACAAGACCTCAGTTGCACAAAAA 59.490 39.130 0.00 0.00 0.00 1.94
91 92 3.088532 ACAAGACCTCAGTTGCACAAAA 58.911 40.909 0.00 0.00 0.00 2.44
92 93 2.722094 ACAAGACCTCAGTTGCACAAA 58.278 42.857 0.00 0.00 0.00 2.83
93 94 2.418368 ACAAGACCTCAGTTGCACAA 57.582 45.000 0.00 0.00 0.00 3.33
94 95 2.016318 CAACAAGACCTCAGTTGCACA 58.984 47.619 0.00 0.00 36.59 4.57
95 96 2.763249 CAACAAGACCTCAGTTGCAC 57.237 50.000 0.00 0.00 36.59 4.57
98 99 2.564771 TCTGCAACAAGACCTCAGTTG 58.435 47.619 0.00 0.00 44.01 3.16
99 100 3.281727 TTCTGCAACAAGACCTCAGTT 57.718 42.857 0.00 0.00 0.00 3.16
100 101 3.281727 TTTCTGCAACAAGACCTCAGT 57.718 42.857 0.00 0.00 0.00 3.41
101 102 4.843220 ATTTTCTGCAACAAGACCTCAG 57.157 40.909 0.00 0.00 0.00 3.35
102 103 5.596836 AAATTTTCTGCAACAAGACCTCA 57.403 34.783 0.00 0.00 0.00 3.86
103 104 5.173854 CGAAAATTTTCTGCAACAAGACCTC 59.826 40.000 24.53 0.00 35.07 3.85
104 105 5.043248 CGAAAATTTTCTGCAACAAGACCT 58.957 37.500 24.53 0.00 35.07 3.85
105 106 4.318050 GCGAAAATTTTCTGCAACAAGACC 60.318 41.667 27.46 5.52 36.99 3.85
106 107 4.267452 TGCGAAAATTTTCTGCAACAAGAC 59.733 37.500 30.27 12.72 40.69 3.01
107 108 4.428209 TGCGAAAATTTTCTGCAACAAGA 58.572 34.783 30.27 16.77 40.69 3.02
108 109 4.775440 TGCGAAAATTTTCTGCAACAAG 57.225 36.364 30.27 16.07 40.69 3.16
112 113 4.428209 TCTGTTGCGAAAATTTTCTGCAA 58.572 34.783 33.76 33.76 45.14 4.08
113 114 4.039151 TCTGTTGCGAAAATTTTCTGCA 57.961 36.364 29.46 29.46 41.33 4.41
114 115 3.426525 CCTCTGTTGCGAAAATTTTCTGC 59.573 43.478 26.53 26.53 37.29 4.26
115 116 4.610945 ACCTCTGTTGCGAAAATTTTCTG 58.389 39.130 24.53 19.06 35.07 3.02
116 117 4.918810 ACCTCTGTTGCGAAAATTTTCT 57.081 36.364 24.53 3.29 35.07 2.52
117 118 5.966636 AAACCTCTGTTGCGAAAATTTTC 57.033 34.783 19.08 19.08 34.13 2.29
118 119 5.641636 ACAAAACCTCTGTTGCGAAAATTTT 59.358 32.000 2.28 2.28 34.13 1.82
119 120 5.175127 ACAAAACCTCTGTTGCGAAAATTT 58.825 33.333 0.00 0.00 34.13 1.82
120 121 4.754322 ACAAAACCTCTGTTGCGAAAATT 58.246 34.783 0.00 0.00 34.13 1.82
121 122 4.385358 ACAAAACCTCTGTTGCGAAAAT 57.615 36.364 0.00 0.00 34.13 1.82
122 123 3.859411 ACAAAACCTCTGTTGCGAAAA 57.141 38.095 0.00 0.00 34.13 2.29
123 124 3.506810 CAACAAAACCTCTGTTGCGAAA 58.493 40.909 3.02 0.00 45.07 3.46
124 125 3.143807 CAACAAAACCTCTGTTGCGAA 57.856 42.857 3.02 0.00 45.07 4.70
125 126 2.842208 CAACAAAACCTCTGTTGCGA 57.158 45.000 3.02 0.00 45.07 5.10
129 130 4.893608 AGTTTTGCAACAAAACCTCTGTT 58.106 34.783 24.68 8.99 40.10 3.16
130 131 4.535526 AGTTTTGCAACAAAACCTCTGT 57.464 36.364 24.68 9.56 40.10 3.41
131 132 5.743872 GTCTAGTTTTGCAACAAAACCTCTG 59.256 40.000 24.68 15.51 40.10 3.35
132 133 5.163550 GGTCTAGTTTTGCAACAAAACCTCT 60.164 40.000 24.68 13.83 40.10 3.69
133 134 5.041287 GGTCTAGTTTTGCAACAAAACCTC 58.959 41.667 24.68 15.40 40.10 3.85
134 135 4.142026 GGGTCTAGTTTTGCAACAAAACCT 60.142 41.667 24.68 17.00 40.10 3.50
135 136 4.116961 GGGTCTAGTTTTGCAACAAAACC 58.883 43.478 24.68 14.40 40.10 3.27
136 137 3.794564 CGGGTCTAGTTTTGCAACAAAAC 59.205 43.478 22.21 22.21 39.67 2.43
137 138 3.444388 ACGGGTCTAGTTTTGCAACAAAA 59.556 39.130 0.00 1.50 35.05 2.44
138 139 3.018149 ACGGGTCTAGTTTTGCAACAAA 58.982 40.909 0.00 0.00 35.05 2.83
139 140 2.614983 GACGGGTCTAGTTTTGCAACAA 59.385 45.455 0.00 0.00 35.05 2.83
140 141 2.215196 GACGGGTCTAGTTTTGCAACA 58.785 47.619 0.00 0.00 35.05 3.33
141 142 2.215196 TGACGGGTCTAGTTTTGCAAC 58.785 47.619 0.00 0.00 0.00 4.17
142 143 2.623878 TGACGGGTCTAGTTTTGCAA 57.376 45.000 0.00 0.00 0.00 4.08
143 144 2.851263 ATGACGGGTCTAGTTTTGCA 57.149 45.000 0.00 0.00 0.00 4.08
144 145 3.864003 GTCTATGACGGGTCTAGTTTTGC 59.136 47.826 0.00 0.00 0.00 3.68
145 146 4.081862 TGGTCTATGACGGGTCTAGTTTTG 60.082 45.833 0.00 0.00 32.65 2.44
146 147 4.091549 TGGTCTATGACGGGTCTAGTTTT 58.908 43.478 0.00 0.00 32.65 2.43
147 148 3.705051 TGGTCTATGACGGGTCTAGTTT 58.295 45.455 0.00 0.00 32.65 2.66
148 149 3.377253 TGGTCTATGACGGGTCTAGTT 57.623 47.619 0.00 0.00 32.65 2.24
149 150 3.596940 ATGGTCTATGACGGGTCTAGT 57.403 47.619 0.00 0.00 32.65 2.57
150 151 3.553096 GCAATGGTCTATGACGGGTCTAG 60.553 52.174 0.00 0.82 32.65 2.43
151 152 2.364324 GCAATGGTCTATGACGGGTCTA 59.636 50.000 0.00 0.00 32.65 2.59
152 153 1.139058 GCAATGGTCTATGACGGGTCT 59.861 52.381 0.00 0.00 32.65 3.85
153 154 1.134521 TGCAATGGTCTATGACGGGTC 60.135 52.381 0.00 0.00 32.65 4.46
154 155 0.908910 TGCAATGGTCTATGACGGGT 59.091 50.000 0.00 0.00 32.65 5.28
155 156 1.670811 GTTGCAATGGTCTATGACGGG 59.329 52.381 0.59 0.00 32.65 5.28
156 157 2.095853 GTGTTGCAATGGTCTATGACGG 59.904 50.000 0.59 0.00 32.65 4.79
157 158 2.095853 GGTGTTGCAATGGTCTATGACG 59.904 50.000 0.59 0.00 32.65 4.35
158 159 3.081061 TGGTGTTGCAATGGTCTATGAC 58.919 45.455 0.59 0.00 0.00 3.06
159 160 3.081061 GTGGTGTTGCAATGGTCTATGA 58.919 45.455 0.59 0.00 0.00 2.15
160 161 2.819019 TGTGGTGTTGCAATGGTCTATG 59.181 45.455 0.59 0.00 0.00 2.23
161 162 3.153369 TGTGGTGTTGCAATGGTCTAT 57.847 42.857 0.59 0.00 0.00 1.98
162 163 2.647683 TGTGGTGTTGCAATGGTCTA 57.352 45.000 0.59 0.00 0.00 2.59
163 164 1.999648 ATGTGGTGTTGCAATGGTCT 58.000 45.000 0.59 0.00 0.00 3.85
164 165 3.193267 ACATATGTGGTGTTGCAATGGTC 59.807 43.478 7.78 0.00 0.00 4.02
165 166 3.164268 ACATATGTGGTGTTGCAATGGT 58.836 40.909 7.78 0.00 0.00 3.55
166 167 3.872511 ACATATGTGGTGTTGCAATGG 57.127 42.857 7.78 0.00 0.00 3.16
167 168 5.346551 CAGAAACATATGTGGTGTTGCAATG 59.653 40.000 9.63 0.00 39.57 2.82
168 169 5.243507 TCAGAAACATATGTGGTGTTGCAAT 59.756 36.000 9.63 0.00 39.57 3.56
169 170 4.582240 TCAGAAACATATGTGGTGTTGCAA 59.418 37.500 9.63 0.00 39.57 4.08
170 171 4.140536 TCAGAAACATATGTGGTGTTGCA 58.859 39.130 9.63 0.00 39.57 4.08
171 172 4.764679 TCAGAAACATATGTGGTGTTGC 57.235 40.909 9.63 0.00 39.57 4.17
174 175 8.840321 GCTATATTTCAGAAACATATGTGGTGT 58.160 33.333 9.63 0.00 0.00 4.16
175 176 8.292448 GGCTATATTTCAGAAACATATGTGGTG 58.708 37.037 9.63 7.50 0.00 4.17
176 177 8.220559 AGGCTATATTTCAGAAACATATGTGGT 58.779 33.333 9.63 0.00 0.00 4.16
177 178 8.627208 AGGCTATATTTCAGAAACATATGTGG 57.373 34.615 9.63 0.05 0.00 4.17
178 179 9.499479 AGAGGCTATATTTCAGAAACATATGTG 57.501 33.333 9.63 0.00 0.00 3.21
179 180 9.499479 CAGAGGCTATATTTCAGAAACATATGT 57.501 33.333 1.41 1.41 0.00 2.29
180 181 9.499479 ACAGAGGCTATATTTCAGAAACATATG 57.501 33.333 0.00 0.00 0.00 1.78
182 183 9.905713 AAACAGAGGCTATATTTCAGAAACATA 57.094 29.630 0.00 0.00 0.00 2.29
183 184 8.814038 AAACAGAGGCTATATTTCAGAAACAT 57.186 30.769 0.00 0.00 0.00 2.71
184 185 7.064609 CGAAACAGAGGCTATATTTCAGAAACA 59.935 37.037 12.76 0.00 31.11 2.83
185 186 7.402640 CGAAACAGAGGCTATATTTCAGAAAC 58.597 38.462 12.76 0.00 31.11 2.78
186 187 6.538742 CCGAAACAGAGGCTATATTTCAGAAA 59.461 38.462 12.76 0.00 31.11 2.52
187 188 6.049149 CCGAAACAGAGGCTATATTTCAGAA 58.951 40.000 12.76 0.00 31.11 3.02
188 189 5.362717 TCCGAAACAGAGGCTATATTTCAGA 59.637 40.000 12.76 4.40 31.11 3.27
189 190 5.601662 TCCGAAACAGAGGCTATATTTCAG 58.398 41.667 12.76 2.05 31.11 3.02
190 191 5.607939 TCCGAAACAGAGGCTATATTTCA 57.392 39.130 12.76 0.00 31.11 2.69
191 192 5.050023 GCTTCCGAAACAGAGGCTATATTTC 60.050 44.000 2.87 2.87 33.82 2.17
192 193 4.816925 GCTTCCGAAACAGAGGCTATATTT 59.183 41.667 0.00 0.00 33.82 1.40
193 194 4.381411 GCTTCCGAAACAGAGGCTATATT 58.619 43.478 0.00 0.00 33.82 1.28
194 195 3.553096 CGCTTCCGAAACAGAGGCTATAT 60.553 47.826 0.00 0.00 34.41 0.86
195 196 2.223735 CGCTTCCGAAACAGAGGCTATA 60.224 50.000 0.00 0.00 34.41 1.31
196 197 1.471676 CGCTTCCGAAACAGAGGCTAT 60.472 52.381 0.00 0.00 34.41 2.97
197 198 0.108804 CGCTTCCGAAACAGAGGCTA 60.109 55.000 0.00 0.00 34.41 3.93
198 199 1.374758 CGCTTCCGAAACAGAGGCT 60.375 57.895 0.00 0.00 34.41 4.58
199 200 3.028366 GCGCTTCCGAAACAGAGGC 62.028 63.158 0.00 0.00 36.29 4.70
200 201 2.730672 CGCGCTTCCGAAACAGAGG 61.731 63.158 5.56 0.00 36.29 3.69
201 202 1.557443 AACGCGCTTCCGAAACAGAG 61.557 55.000 5.73 0.00 36.29 3.35
202 203 1.554042 GAACGCGCTTCCGAAACAGA 61.554 55.000 5.73 0.00 36.29 3.41
203 204 1.154654 GAACGCGCTTCCGAAACAG 60.155 57.895 5.73 0.00 36.29 3.16
204 205 2.932905 GAACGCGCTTCCGAAACA 59.067 55.556 5.73 0.00 36.29 2.83
205 206 2.202008 CGAACGCGCTTCCGAAAC 60.202 61.111 5.73 0.00 36.29 2.78
206 207 2.354891 TCGAACGCGCTTCCGAAA 60.355 55.556 5.73 0.00 37.46 3.46
207 208 3.101428 GTCGAACGCGCTTCCGAA 61.101 61.111 5.73 0.00 37.46 4.30
208 209 3.827551 TTGTCGAACGCGCTTCCGA 62.828 57.895 5.73 7.38 37.46 4.55
209 210 2.419100 TTTTGTCGAACGCGCTTCCG 62.419 55.000 5.73 4.70 37.46 4.30
210 211 0.316360 TTTTTGTCGAACGCGCTTCC 60.316 50.000 5.73 0.00 37.46 3.46
211 212 3.136800 TTTTTGTCGAACGCGCTTC 57.863 47.368 5.73 8.71 37.46 3.86
233 234 1.295792 CCAATTGATGGCTTGCATGC 58.704 50.000 15.87 15.87 43.80 4.06
243 244 3.486375 GCATGACACTCGTCCAATTGATG 60.486 47.826 7.12 0.00 41.85 3.07
244 245 2.679837 GCATGACACTCGTCCAATTGAT 59.320 45.455 7.12 0.00 41.85 2.57
245 246 2.076100 GCATGACACTCGTCCAATTGA 58.924 47.619 7.12 0.00 41.85 2.57
246 247 1.805943 TGCATGACACTCGTCCAATTG 59.194 47.619 0.00 0.00 41.85 2.32
247 248 2.079158 CTGCATGACACTCGTCCAATT 58.921 47.619 0.00 0.00 41.85 2.32
248 249 1.730501 CTGCATGACACTCGTCCAAT 58.269 50.000 0.00 0.00 41.85 3.16
249 250 0.950555 GCTGCATGACACTCGTCCAA 60.951 55.000 0.00 0.00 41.85 3.53
250 251 1.374631 GCTGCATGACACTCGTCCA 60.375 57.895 0.00 0.00 41.85 4.02
251 252 2.447887 CGCTGCATGACACTCGTCC 61.448 63.158 0.00 0.00 41.85 4.79
252 253 2.447887 CCGCTGCATGACACTCGTC 61.448 63.158 0.00 0.00 42.93 4.20
253 254 2.433145 CCGCTGCATGACACTCGT 60.433 61.111 0.00 0.00 0.00 4.18
254 255 2.125952 TCCGCTGCATGACACTCG 60.126 61.111 0.00 0.00 0.00 4.18
255 256 1.812922 CCTCCGCTGCATGACACTC 60.813 63.158 0.00 0.00 0.00 3.51
256 257 2.267006 CCTCCGCTGCATGACACT 59.733 61.111 0.00 0.00 0.00 3.55
257 258 2.046892 ACCTCCGCTGCATGACAC 60.047 61.111 0.00 0.00 0.00 3.67
258 259 2.046988 CACCTCCGCTGCATGACA 60.047 61.111 0.00 0.00 0.00 3.58
259 260 2.821366 CCACCTCCGCTGCATGAC 60.821 66.667 0.00 0.00 0.00 3.06
260 261 4.783621 GCCACCTCCGCTGCATGA 62.784 66.667 0.00 0.00 0.00 3.07
278 279 3.711541 AATCGTAGTGGCCGCGTCC 62.712 63.158 11.42 0.42 0.00 4.79
279 280 2.202703 AATCGTAGTGGCCGCGTC 60.203 61.111 11.42 7.17 0.00 5.19
280 281 2.202703 GAATCGTAGTGGCCGCGT 60.203 61.111 11.42 1.86 0.00 6.01
281 282 3.320078 CGAATCGTAGTGGCCGCG 61.320 66.667 11.42 0.00 0.00 6.46
282 283 3.627218 GCGAATCGTAGTGGCCGC 61.627 66.667 8.71 8.71 35.91 6.53
283 284 2.960129 GGCGAATCGTAGTGGCCG 60.960 66.667 4.07 0.00 33.58 6.13
284 285 2.960129 CGGCGAATCGTAGTGGCC 60.960 66.667 0.00 0.00 40.36 5.36
285 286 2.694829 ATCCGGCGAATCGTAGTGGC 62.695 60.000 9.30 0.00 0.00 5.01
286 287 0.939577 CATCCGGCGAATCGTAGTGG 60.940 60.000 9.30 1.50 0.00 4.00
287 288 0.030235 TCATCCGGCGAATCGTAGTG 59.970 55.000 9.30 0.00 0.00 2.74
288 289 0.030369 GTCATCCGGCGAATCGTAGT 59.970 55.000 9.30 0.00 0.00 2.73
289 290 0.997226 CGTCATCCGGCGAATCGTAG 60.997 60.000 9.30 0.00 0.00 3.51
290 291 1.009335 CGTCATCCGGCGAATCGTA 60.009 57.895 9.30 0.00 0.00 3.43
291 292 2.278596 CGTCATCCGGCGAATCGT 60.279 61.111 9.30 0.00 0.00 3.73
300 301 1.597663 GGAAAAGCATACCGTCATCCG 59.402 52.381 0.00 0.00 0.00 4.18
301 302 2.919228 AGGAAAAGCATACCGTCATCC 58.081 47.619 0.00 0.00 0.00 3.51
302 303 4.965119 AAAGGAAAAGCATACCGTCATC 57.035 40.909 0.00 0.00 0.00 2.92
303 304 5.722021 AAAAAGGAAAAGCATACCGTCAT 57.278 34.783 0.00 0.00 0.00 3.06
324 325 7.111466 ACTGGTATAGGGCGTGTTAATAAAAA 58.889 34.615 0.00 0.00 0.00 1.94
325 326 6.652053 ACTGGTATAGGGCGTGTTAATAAAA 58.348 36.000 0.00 0.00 0.00 1.52
326 327 6.237887 ACTGGTATAGGGCGTGTTAATAAA 57.762 37.500 0.00 0.00 0.00 1.40
327 328 5.874897 ACTGGTATAGGGCGTGTTAATAA 57.125 39.130 0.00 0.00 0.00 1.40
328 329 6.975196 TTACTGGTATAGGGCGTGTTAATA 57.025 37.500 0.00 0.00 0.00 0.98
329 330 5.874897 TTACTGGTATAGGGCGTGTTAAT 57.125 39.130 0.00 0.00 0.00 1.40
330 331 5.674052 TTTACTGGTATAGGGCGTGTTAA 57.326 39.130 0.00 0.00 0.00 2.01
331 332 5.674052 TTTTACTGGTATAGGGCGTGTTA 57.326 39.130 0.00 0.00 0.00 2.41
332 333 4.556592 TTTTACTGGTATAGGGCGTGTT 57.443 40.909 0.00 0.00 0.00 3.32
333 334 4.556592 TTTTTACTGGTATAGGGCGTGT 57.443 40.909 0.00 0.00 0.00 4.49
334 335 6.445357 AAATTTTTACTGGTATAGGGCGTG 57.555 37.500 0.00 0.00 0.00 5.34
335 336 6.258507 CGTAAATTTTTACTGGTATAGGGCGT 59.741 38.462 10.53 0.00 40.57 5.68
336 337 6.479660 TCGTAAATTTTTACTGGTATAGGGCG 59.520 38.462 10.53 0.00 40.57 6.13
337 338 7.790823 TCGTAAATTTTTACTGGTATAGGGC 57.209 36.000 10.53 0.00 40.57 5.19
350 351 9.715123 CAAGCAATTCCTTTTTCGTAAATTTTT 57.285 25.926 0.00 0.00 0.00 1.94
351 352 8.341903 CCAAGCAATTCCTTTTTCGTAAATTTT 58.658 29.630 0.00 0.00 0.00 1.82
352 353 7.041440 CCCAAGCAATTCCTTTTTCGTAAATTT 60.041 33.333 0.00 0.00 0.00 1.82
353 354 6.426633 CCCAAGCAATTCCTTTTTCGTAAATT 59.573 34.615 0.00 0.00 0.00 1.82
354 355 5.931724 CCCAAGCAATTCCTTTTTCGTAAAT 59.068 36.000 0.00 0.00 0.00 1.40
355 356 5.293560 CCCAAGCAATTCCTTTTTCGTAAA 58.706 37.500 0.00 0.00 0.00 2.01
356 357 4.262249 CCCCAAGCAATTCCTTTTTCGTAA 60.262 41.667 0.00 0.00 0.00 3.18
357 358 3.257127 CCCCAAGCAATTCCTTTTTCGTA 59.743 43.478 0.00 0.00 0.00 3.43
358 359 2.037121 CCCCAAGCAATTCCTTTTTCGT 59.963 45.455 0.00 0.00 0.00 3.85
359 360 2.037121 ACCCCAAGCAATTCCTTTTTCG 59.963 45.455 0.00 0.00 0.00 3.46
360 361 3.769739 ACCCCAAGCAATTCCTTTTTC 57.230 42.857 0.00 0.00 0.00 2.29
361 362 3.819368 CAACCCCAAGCAATTCCTTTTT 58.181 40.909 0.00 0.00 0.00 1.94
362 363 2.487086 GCAACCCCAAGCAATTCCTTTT 60.487 45.455 0.00 0.00 0.00 2.27
363 364 1.072173 GCAACCCCAAGCAATTCCTTT 59.928 47.619 0.00 0.00 0.00 3.11
364 365 0.686789 GCAACCCCAAGCAATTCCTT 59.313 50.000 0.00 0.00 0.00 3.36
365 366 0.178924 AGCAACCCCAAGCAATTCCT 60.179 50.000 0.00 0.00 0.00 3.36
366 367 0.247460 GAGCAACCCCAAGCAATTCC 59.753 55.000 0.00 0.00 0.00 3.01
367 368 1.260544 AGAGCAACCCCAAGCAATTC 58.739 50.000 0.00 0.00 0.00 2.17
368 369 1.720781 AAGAGCAACCCCAAGCAATT 58.279 45.000 0.00 0.00 0.00 2.32
369 370 1.720781 AAAGAGCAACCCCAAGCAAT 58.279 45.000 0.00 0.00 0.00 3.56
370 371 2.373335 TAAAGAGCAACCCCAAGCAA 57.627 45.000 0.00 0.00 0.00 3.91
371 372 2.603075 ATAAAGAGCAACCCCAAGCA 57.397 45.000 0.00 0.00 0.00 3.91
372 373 2.825532 TGAATAAAGAGCAACCCCAAGC 59.174 45.455 0.00 0.00 0.00 4.01
373 374 3.826157 TGTGAATAAAGAGCAACCCCAAG 59.174 43.478 0.00 0.00 0.00 3.61
374 375 3.572255 GTGTGAATAAAGAGCAACCCCAA 59.428 43.478 0.00 0.00 0.00 4.12
375 376 3.153919 GTGTGAATAAAGAGCAACCCCA 58.846 45.455 0.00 0.00 0.00 4.96
376 377 2.492088 GGTGTGAATAAAGAGCAACCCC 59.508 50.000 0.00 0.00 0.00 4.95
377 378 2.492088 GGGTGTGAATAAAGAGCAACCC 59.508 50.000 0.00 0.00 31.14 4.11
378 379 2.161609 CGGGTGTGAATAAAGAGCAACC 59.838 50.000 0.00 0.00 33.84 3.77
379 380 3.071479 TCGGGTGTGAATAAAGAGCAAC 58.929 45.455 0.00 0.00 0.00 4.17
380 381 3.007506 TCTCGGGTGTGAATAAAGAGCAA 59.992 43.478 0.00 0.00 0.00 3.91
381 382 2.565391 TCTCGGGTGTGAATAAAGAGCA 59.435 45.455 0.00 0.00 0.00 4.26
382 383 3.247006 TCTCGGGTGTGAATAAAGAGC 57.753 47.619 0.00 0.00 0.00 4.09
383 384 5.419542 TGATTCTCGGGTGTGAATAAAGAG 58.580 41.667 0.00 0.00 38.17 2.85
384 385 5.414789 TGATTCTCGGGTGTGAATAAAGA 57.585 39.130 0.00 0.00 38.17 2.52
385 386 6.371548 TCTTTGATTCTCGGGTGTGAATAAAG 59.628 38.462 0.00 0.00 38.17 1.85
386 387 6.234920 TCTTTGATTCTCGGGTGTGAATAAA 58.765 36.000 0.00 0.00 38.17 1.40
387 388 5.800296 TCTTTGATTCTCGGGTGTGAATAA 58.200 37.500 0.00 0.00 38.17 1.40
388 389 5.414789 TCTTTGATTCTCGGGTGTGAATA 57.585 39.130 0.00 0.00 38.17 1.75
389 390 4.286297 TCTTTGATTCTCGGGTGTGAAT 57.714 40.909 0.00 0.00 40.13 2.57
390 391 3.762407 TCTTTGATTCTCGGGTGTGAA 57.238 42.857 0.00 0.00 32.64 3.18
391 392 3.762407 TTCTTTGATTCTCGGGTGTGA 57.238 42.857 0.00 0.00 0.00 3.58
392 393 4.515191 TCTTTTCTTTGATTCTCGGGTGTG 59.485 41.667 0.00 0.00 0.00 3.82
393 394 4.714632 TCTTTTCTTTGATTCTCGGGTGT 58.285 39.130 0.00 0.00 0.00 4.16
394 395 5.470098 TCTTCTTTTCTTTGATTCTCGGGTG 59.530 40.000 0.00 0.00 0.00 4.61
395 396 5.621193 TCTTCTTTTCTTTGATTCTCGGGT 58.379 37.500 0.00 0.00 0.00 5.28
396 397 5.934625 TCTCTTCTTTTCTTTGATTCTCGGG 59.065 40.000 0.00 0.00 0.00 5.14
397 398 7.426929 TTCTCTTCTTTTCTTTGATTCTCGG 57.573 36.000 0.00 0.00 0.00 4.63
412 413 9.525826 ACACATCCTTTGAAATATTCTCTTCTT 57.474 29.630 0.00 0.00 0.00 2.52
413 414 9.525826 AACACATCCTTTGAAATATTCTCTTCT 57.474 29.630 0.00 0.00 0.00 2.85
418 419 8.971073 CCCTAAACACATCCTTTGAAATATTCT 58.029 33.333 0.00 0.00 0.00 2.40
419 420 7.706607 GCCCTAAACACATCCTTTGAAATATTC 59.293 37.037 0.00 0.00 0.00 1.75
420 421 7.180051 TGCCCTAAACACATCCTTTGAAATATT 59.820 33.333 0.00 0.00 0.00 1.28
421 422 6.667414 TGCCCTAAACACATCCTTTGAAATAT 59.333 34.615 0.00 0.00 0.00 1.28
422 423 6.013379 TGCCCTAAACACATCCTTTGAAATA 58.987 36.000 0.00 0.00 0.00 1.40
423 424 4.837860 TGCCCTAAACACATCCTTTGAAAT 59.162 37.500 0.00 0.00 0.00 2.17
424 425 4.219115 TGCCCTAAACACATCCTTTGAAA 58.781 39.130 0.00 0.00 0.00 2.69
425 426 3.838565 TGCCCTAAACACATCCTTTGAA 58.161 40.909 0.00 0.00 0.00 2.69
426 427 3.517296 TGCCCTAAACACATCCTTTGA 57.483 42.857 0.00 0.00 0.00 2.69
427 428 5.829924 AGATATGCCCTAAACACATCCTTTG 59.170 40.000 0.00 0.00 0.00 2.77
428 429 6.018433 AGATATGCCCTAAACACATCCTTT 57.982 37.500 0.00 0.00 0.00 3.11
429 430 5.653255 AGATATGCCCTAAACACATCCTT 57.347 39.130 0.00 0.00 0.00 3.36
430 431 6.084738 TCTAGATATGCCCTAAACACATCCT 58.915 40.000 0.00 0.00 0.00 3.24
431 432 6.360370 TCTAGATATGCCCTAAACACATCC 57.640 41.667 0.00 0.00 0.00 3.51
432 433 7.332926 CACATCTAGATATGCCCTAAACACATC 59.667 40.741 4.54 0.00 0.00 3.06
433 434 7.164122 CACATCTAGATATGCCCTAAACACAT 58.836 38.462 4.54 0.00 0.00 3.21
434 435 6.524734 CACATCTAGATATGCCCTAAACACA 58.475 40.000 4.54 0.00 0.00 3.72
435 436 5.409826 GCACATCTAGATATGCCCTAAACAC 59.590 44.000 22.87 0.00 35.32 3.32
436 437 5.307976 AGCACATCTAGATATGCCCTAAACA 59.692 40.000 28.11 0.00 41.89 2.83
437 438 5.799213 AGCACATCTAGATATGCCCTAAAC 58.201 41.667 28.11 3.72 41.89 2.01
438 439 7.739995 ATAGCACATCTAGATATGCCCTAAA 57.260 36.000 28.11 12.25 41.89 1.85
439 440 8.061920 ACTATAGCACATCTAGATATGCCCTAA 58.938 37.037 28.11 14.43 41.89 2.69
440 441 7.587258 ACTATAGCACATCTAGATATGCCCTA 58.413 38.462 28.11 19.26 41.89 3.53
441 442 6.439487 ACTATAGCACATCTAGATATGCCCT 58.561 40.000 28.11 19.18 41.89 5.19
442 443 6.723298 ACTATAGCACATCTAGATATGCCC 57.277 41.667 28.11 6.46 41.89 5.36
457 458 8.421002 TCACTTAGATGTGCAATAACTATAGCA 58.579 33.333 0.00 0.00 37.81 3.49
458 459 8.818141 TCACTTAGATGTGCAATAACTATAGC 57.182 34.615 0.00 0.00 37.81 2.97
459 460 9.973450 ACTCACTTAGATGTGCAATAACTATAG 57.027 33.333 0.00 0.00 37.81 1.31
460 461 9.750125 CACTCACTTAGATGTGCAATAACTATA 57.250 33.333 0.00 0.00 37.81 1.31
461 462 8.478066 TCACTCACTTAGATGTGCAATAACTAT 58.522 33.333 0.00 0.00 37.81 2.12
462 463 7.836842 TCACTCACTTAGATGTGCAATAACTA 58.163 34.615 0.00 0.00 37.81 2.24
463 464 6.701340 TCACTCACTTAGATGTGCAATAACT 58.299 36.000 0.00 0.00 37.81 2.24
464 465 6.968131 TCACTCACTTAGATGTGCAATAAC 57.032 37.500 0.00 0.00 37.81 1.89
465 466 8.565896 AATTCACTCACTTAGATGTGCAATAA 57.434 30.769 0.00 0.00 37.81 1.40
466 467 9.665719 TTAATTCACTCACTTAGATGTGCAATA 57.334 29.630 0.00 0.00 37.81 1.90
467 468 8.565896 TTAATTCACTCACTTAGATGTGCAAT 57.434 30.769 0.00 0.00 37.81 3.56
468 469 7.661437 ACTTAATTCACTCACTTAGATGTGCAA 59.339 33.333 0.00 0.00 37.81 4.08
469 470 7.161404 ACTTAATTCACTCACTTAGATGTGCA 58.839 34.615 0.00 0.00 37.81 4.57
470 471 7.602517 ACTTAATTCACTCACTTAGATGTGC 57.397 36.000 0.00 0.00 37.81 4.57
514 515 9.676861 TGATCTTAAGTTGAGATTCATGTGATT 57.323 29.630 11.15 0.00 34.13 2.57
515 516 9.676861 TTGATCTTAAGTTGAGATTCATGTGAT 57.323 29.630 11.15 0.00 34.13 3.06
516 517 9.676861 ATTGATCTTAAGTTGAGATTCATGTGA 57.323 29.630 11.15 0.00 34.13 3.58
517 518 9.717892 CATTGATCTTAAGTTGAGATTCATGTG 57.282 33.333 11.15 8.86 34.13 3.21
518 519 9.676861 TCATTGATCTTAAGTTGAGATTCATGT 57.323 29.630 19.18 8.37 34.13 3.21
587 588 8.574196 TCTTTGAAATACAGTTTTGCTAAAGC 57.426 30.769 0.00 0.00 42.50 3.51
588 589 9.950680 TCTCTTTGAAATACAGTTTTGCTAAAG 57.049 29.630 0.00 0.00 0.00 1.85
589 590 9.950680 CTCTCTTTGAAATACAGTTTTGCTAAA 57.049 29.630 0.00 0.00 0.00 1.85
590 591 9.337396 TCTCTCTTTGAAATACAGTTTTGCTAA 57.663 29.630 0.00 0.00 0.00 3.09
591 592 8.902540 TCTCTCTTTGAAATACAGTTTTGCTA 57.097 30.769 0.00 0.00 0.00 3.49
592 593 7.716998 TCTCTCTCTTTGAAATACAGTTTTGCT 59.283 33.333 0.00 0.00 0.00 3.91
593 594 7.865707 TCTCTCTCTTTGAAATACAGTTTTGC 58.134 34.615 0.00 0.00 0.00 3.68
619 620 9.987272 CCATGTAGATTTTCCTTTTCTCTTTTT 57.013 29.630 0.00 0.00 0.00 1.94
620 621 8.588472 CCCATGTAGATTTTCCTTTTCTCTTTT 58.412 33.333 0.00 0.00 0.00 2.27
621 622 7.730332 ACCCATGTAGATTTTCCTTTTCTCTTT 59.270 33.333 0.00 0.00 0.00 2.52
622 623 7.241628 ACCCATGTAGATTTTCCTTTTCTCTT 58.758 34.615 0.00 0.00 0.00 2.85
623 624 6.794534 ACCCATGTAGATTTTCCTTTTCTCT 58.205 36.000 0.00 0.00 0.00 3.10
624 625 6.659242 TGACCCATGTAGATTTTCCTTTTCTC 59.341 38.462 0.00 0.00 0.00 2.87
625 626 6.434340 GTGACCCATGTAGATTTTCCTTTTCT 59.566 38.462 0.00 0.00 0.00 2.52
626 627 6.350194 GGTGACCCATGTAGATTTTCCTTTTC 60.350 42.308 0.00 0.00 0.00 2.29
627 628 5.480422 GGTGACCCATGTAGATTTTCCTTTT 59.520 40.000 0.00 0.00 0.00 2.27
628 629 5.016831 GGTGACCCATGTAGATTTTCCTTT 58.983 41.667 0.00 0.00 0.00 3.11
629 630 4.600062 GGTGACCCATGTAGATTTTCCTT 58.400 43.478 0.00 0.00 0.00 3.36
630 631 4.236527 GGTGACCCATGTAGATTTTCCT 57.763 45.455 0.00 0.00 0.00 3.36
651 652 2.046285 GCACCGACCCCTGATTTGG 61.046 63.158 0.00 0.00 0.00 3.28
652 653 2.046285 GGCACCGACCCCTGATTTG 61.046 63.158 0.00 0.00 0.00 2.32
653 654 2.355115 GGCACCGACCCCTGATTT 59.645 61.111 0.00 0.00 0.00 2.17
654 655 2.933287 TGGCACCGACCCCTGATT 60.933 61.111 0.00 0.00 0.00 2.57
655 656 3.717294 GTGGCACCGACCCCTGAT 61.717 66.667 6.29 0.00 0.00 2.90
687 688 2.200373 CCCGAGCTAAATTATGGGGG 57.800 55.000 0.00 0.00 32.85 5.40
689 690 2.372172 AGACCCCGAGCTAAATTATGGG 59.628 50.000 0.00 0.00 37.58 4.00
690 691 3.771577 AGACCCCGAGCTAAATTATGG 57.228 47.619 0.00 0.00 0.00 2.74
691 692 3.251004 GCAAGACCCCGAGCTAAATTATG 59.749 47.826 0.00 0.00 0.00 1.90
692 693 3.136626 AGCAAGACCCCGAGCTAAATTAT 59.863 43.478 0.00 0.00 35.19 1.28
693 694 2.504175 AGCAAGACCCCGAGCTAAATTA 59.496 45.455 0.00 0.00 35.19 1.40
694 695 1.282157 AGCAAGACCCCGAGCTAAATT 59.718 47.619 0.00 0.00 35.19 1.82
695 696 0.912486 AGCAAGACCCCGAGCTAAAT 59.088 50.000 0.00 0.00 35.19 1.40
696 697 0.036388 CAGCAAGACCCCGAGCTAAA 60.036 55.000 0.00 0.00 35.19 1.85
697 698 1.596934 CAGCAAGACCCCGAGCTAA 59.403 57.895 0.00 0.00 35.19 3.09
698 699 2.359169 CCAGCAAGACCCCGAGCTA 61.359 63.158 0.00 0.00 35.19 3.32
699 700 3.710722 CCAGCAAGACCCCGAGCT 61.711 66.667 0.00 0.00 37.95 4.09
701 702 3.259633 AAGCCAGCAAGACCCCGAG 62.260 63.158 0.00 0.00 0.00 4.63
702 703 3.249189 AAGCCAGCAAGACCCCGA 61.249 61.111 0.00 0.00 0.00 5.14
703 704 3.058160 CAAGCCAGCAAGACCCCG 61.058 66.667 0.00 0.00 0.00 5.73
704 705 3.376918 GCAAGCCAGCAAGACCCC 61.377 66.667 0.00 0.00 0.00 4.95
705 706 1.905354 AAGCAAGCCAGCAAGACCC 60.905 57.895 0.55 0.00 36.85 4.46
706 707 1.288127 CAAGCAAGCCAGCAAGACC 59.712 57.895 0.55 0.00 36.85 3.85
707 708 1.372623 GCAAGCAAGCCAGCAAGAC 60.373 57.895 0.55 0.00 36.85 3.01
708 709 1.111116 AAGCAAGCAAGCCAGCAAGA 61.111 50.000 8.66 0.00 36.85 3.02
709 710 0.944311 CAAGCAAGCAAGCCAGCAAG 60.944 55.000 8.66 0.00 36.85 4.01
710 711 1.068417 CAAGCAAGCAAGCCAGCAA 59.932 52.632 8.66 0.00 36.85 3.91
711 712 2.129146 ACAAGCAAGCAAGCCAGCA 61.129 52.632 8.66 0.00 36.85 4.41
712 713 1.663702 CACAAGCAAGCAAGCCAGC 60.664 57.895 0.00 0.00 34.23 4.85
713 714 1.663702 GCACAAGCAAGCAAGCCAG 60.664 57.895 0.00 0.00 41.58 4.85
714 715 2.418356 GCACAAGCAAGCAAGCCA 59.582 55.556 0.00 0.00 41.58 4.75
715 716 2.732094 CGCACAAGCAAGCAAGCC 60.732 61.111 0.00 0.00 42.27 4.35
716 717 2.732094 CCGCACAAGCAAGCAAGC 60.732 61.111 0.00 0.00 42.27 4.01
771 772 7.093322 AGATTTTCAAACATATCTCTGCACC 57.907 36.000 0.00 0.00 0.00 5.01
834 835 4.158384 CGTGATTTTTCGGATCAAGTTGG 58.842 43.478 2.34 0.00 35.46 3.77
892 894 3.011517 AGAGGAGCCATGGCCGTT 61.012 61.111 33.14 18.32 43.17 4.44
920 922 1.469335 TTATAGAGAAGGGCGGGGCG 61.469 60.000 0.00 0.00 0.00 6.13
1141 1146 2.578178 CTTCTCCGCGAGCGTCAG 60.578 66.667 8.23 11.35 37.81 3.51
1159 1164 2.635229 ATCTGCGTCATCTGCCCGAC 62.635 60.000 0.00 0.00 0.00 4.79
1362 1367 1.138671 GTTGTTGTTGCCGTGCACT 59.861 52.632 16.19 0.00 38.71 4.40
1549 1554 1.006832 AACGCGATCCGAAATTCAGG 58.993 50.000 15.93 0.00 41.02 3.86
1558 1577 4.204891 GTCGGCAAACGCGATCCG 62.205 66.667 15.93 18.91 43.86 4.18
1590 1610 2.142761 AGCCAGCAGGTGAGTGACA 61.143 57.895 0.00 0.00 37.19 3.58
1591 1611 2.746359 AGCCAGCAGGTGAGTGAC 59.254 61.111 0.00 0.00 37.19 3.67
1603 1623 0.106819 ATAAGGGAAGCAGCAGCCAG 60.107 55.000 0.00 0.00 43.56 4.85
1605 1625 1.105759 CCATAAGGGAAGCAGCAGCC 61.106 60.000 0.00 0.00 39.80 4.85
1606 1626 0.394899 ACCATAAGGGAAGCAGCAGC 60.395 55.000 0.00 0.00 41.15 5.25
1623 1651 0.106708 TCTCTGCACACCTGTTCACC 59.893 55.000 0.00 0.00 0.00 4.02
1851 1890 1.242076 CTTGTTCCTGCAGTTCCCAG 58.758 55.000 13.81 0.00 0.00 4.45
1906 1945 4.329545 ATGCCGTTCACCGTGCCT 62.330 61.111 0.00 0.00 33.51 4.75
2071 2110 2.496470 GTCTTTGAGGTATCCGGTGACT 59.504 50.000 0.00 0.00 0.00 3.41
2147 2186 3.120321 ACACCTGAATTTGAGCGTACA 57.880 42.857 0.00 0.00 0.00 2.90
2148 2187 3.746492 AGAACACCTGAATTTGAGCGTAC 59.254 43.478 0.00 0.00 0.00 3.67
2149 2188 4.002906 AGAACACCTGAATTTGAGCGTA 57.997 40.909 0.00 0.00 0.00 4.42
2150 2189 2.851195 AGAACACCTGAATTTGAGCGT 58.149 42.857 0.00 0.00 0.00 5.07
2151 2190 3.250762 TGAAGAACACCTGAATTTGAGCG 59.749 43.478 0.00 0.00 0.00 5.03
2152 2191 4.836125 TGAAGAACACCTGAATTTGAGC 57.164 40.909 0.00 0.00 0.00 4.26
2153 2192 6.206243 ACTGATGAAGAACACCTGAATTTGAG 59.794 38.462 0.00 0.00 0.00 3.02
2165 2204 4.963318 AGAGTCCAACTGATGAAGAACA 57.037 40.909 0.00 0.00 0.00 3.18
2166 2205 5.059833 ACAAGAGTCCAACTGATGAAGAAC 58.940 41.667 0.00 0.00 0.00 3.01
2167 2206 5.296151 ACAAGAGTCCAACTGATGAAGAA 57.704 39.130 0.00 0.00 0.00 2.52
2168 2207 4.963318 ACAAGAGTCCAACTGATGAAGA 57.037 40.909 0.00 0.00 0.00 2.87
2169 2208 6.382869 AAAACAAGAGTCCAACTGATGAAG 57.617 37.500 0.00 0.00 0.00 3.02
2349 2412 7.888250 ATCTTTTTCCACAGAGAAGAAAGTT 57.112 32.000 0.00 0.00 32.86 2.66
2367 2430 7.933577 TGTATTCACAGAGAGACACAATCTTTT 59.066 33.333 0.00 0.00 38.00 2.27
2368 2431 7.445121 TGTATTCACAGAGAGACACAATCTTT 58.555 34.615 0.00 0.00 38.00 2.52
2420 2502 1.332686 CCATGATCTGCAACATCACGG 59.667 52.381 9.63 7.84 33.04 4.94
2622 2710 4.703645 TCAGAGTTTCATCGGTCAGTAG 57.296 45.455 0.00 0.00 0.00 2.57
2623 2711 4.678044 GCATCAGAGTTTCATCGGTCAGTA 60.678 45.833 0.00 0.00 0.00 2.74
2624 2712 3.854666 CATCAGAGTTTCATCGGTCAGT 58.145 45.455 0.00 0.00 0.00 3.41
2625 2713 2.606725 GCATCAGAGTTTCATCGGTCAG 59.393 50.000 0.00 0.00 0.00 3.51
2626 2714 2.621338 GCATCAGAGTTTCATCGGTCA 58.379 47.619 0.00 0.00 0.00 4.02
2630 2718 1.645034 ACGGCATCAGAGTTTCATCG 58.355 50.000 0.00 0.00 0.00 3.84
2663 2754 5.730550 TCGGTAGCAAATCATAACTGAACT 58.269 37.500 0.00 0.00 34.37 3.01
2664 2755 6.417191 TTCGGTAGCAAATCATAACTGAAC 57.583 37.500 0.00 0.00 34.37 3.18
2669 2760 8.682128 TTTTGAATTCGGTAGCAAATCATAAC 57.318 30.769 0.04 0.00 31.20 1.89
2686 2777 5.759763 GGAGGTGAAGCAACATTTTTGAATT 59.240 36.000 0.00 0.00 0.00 2.17
2692 2783 3.565307 TCAGGAGGTGAAGCAACATTTT 58.435 40.909 0.00 0.00 29.64 1.82
2694 2785 2.957402 TCAGGAGGTGAAGCAACATT 57.043 45.000 0.00 0.00 29.64 2.71
2695 2786 2.957402 TTCAGGAGGTGAAGCAACAT 57.043 45.000 0.00 0.00 40.45 2.71
2703 2794 6.830324 CCATAAATTCAGAATTCAGGAGGTGA 59.170 38.462 8.90 0.00 0.00 4.02
2704 2795 6.604795 ACCATAAATTCAGAATTCAGGAGGTG 59.395 38.462 20.10 0.00 0.00 4.00
2705 2796 6.604795 CACCATAAATTCAGAATTCAGGAGGT 59.395 38.462 20.10 15.26 0.00 3.85
2706 2797 6.604795 ACACCATAAATTCAGAATTCAGGAGG 59.395 38.462 20.10 14.81 0.00 4.30
2779 2881 1.734477 CACCAGCGACTTCCTCACG 60.734 63.158 0.00 0.00 0.00 4.35
3452 3557 2.294979 CCATCACATGCTGCTGTGTAT 58.705 47.619 22.42 15.38 45.40 2.29
3490 3595 2.476051 CACGGTTCATGTGCGCTC 59.524 61.111 9.73 5.51 0.00 5.03
3492 3597 3.047280 TCCACGGTTCATGTGCGC 61.047 61.111 0.00 0.00 36.01 6.09
3493 3598 2.677003 GGTCCACGGTTCATGTGCG 61.677 63.158 0.00 0.00 36.01 5.34
3495 3600 0.874390 CAAGGTCCACGGTTCATGTG 59.126 55.000 0.00 0.00 37.09 3.21
3496 3601 0.889186 GCAAGGTCCACGGTTCATGT 60.889 55.000 0.00 0.00 0.00 3.21
3546 3658 2.513065 AAAGAATGGCAACTCGCGCG 62.513 55.000 26.76 26.76 43.84 6.86
3556 3668 7.065443 ACGGTAACTTGTTCTATAAAGAATGGC 59.935 37.037 0.00 0.00 43.50 4.40
3581 3693 4.881273 TGTGCTGATGAATATTACCACCAC 59.119 41.667 0.00 0.00 0.00 4.16
3685 3800 2.754552 TGAGGATACATTTGCCACAAGC 59.245 45.455 0.00 0.00 40.74 4.01
3686 3801 4.012374 AGTGAGGATACATTTGCCACAAG 58.988 43.478 0.00 0.00 41.41 3.16
3687 3802 4.032960 AGTGAGGATACATTTGCCACAA 57.967 40.909 0.00 0.00 41.41 3.33
3788 3903 7.673180 CGGGGATGGTAAGTAACTAATTATCA 58.327 38.462 0.00 0.00 32.36 2.15
3791 3906 5.366186 TGCGGGGATGGTAAGTAACTAATTA 59.634 40.000 0.00 0.00 0.00 1.40
3820 3938 8.462589 AAGTTTTATCATGGTGGCAAATTTTT 57.537 26.923 0.00 0.00 0.00 1.94
3826 3944 5.575157 TCCTAAGTTTTATCATGGTGGCAA 58.425 37.500 0.00 0.00 0.00 4.52
3827 3945 5.186256 TCCTAAGTTTTATCATGGTGGCA 57.814 39.130 0.00 0.00 0.00 4.92
3828 3946 5.241728 GGATCCTAAGTTTTATCATGGTGGC 59.758 44.000 3.84 0.00 0.00 5.01
3867 4148 3.621268 TCGTCCTCCATTTAGCATTTTCG 59.379 43.478 0.00 0.00 0.00 3.46
3924 4206 8.743714 GGTTTTATGGAACTTGAGAATGAGATT 58.256 33.333 0.00 0.00 0.00 2.40
3926 4208 6.659242 GGGTTTTATGGAACTTGAGAATGAGA 59.341 38.462 0.00 0.00 0.00 3.27
3944 5375 6.833041 TGTGTGTGATCTTTCTAGGGTTTTA 58.167 36.000 0.00 0.00 0.00 1.52
3949 5380 5.491070 TGAATGTGTGTGATCTTTCTAGGG 58.509 41.667 0.00 0.00 0.00 3.53
3950 5381 7.765819 TGTATGAATGTGTGTGATCTTTCTAGG 59.234 37.037 0.00 0.00 0.00 3.02
3983 5414 7.497595 TCTTCTCAGTTTACACACATGTACTT 58.502 34.615 0.00 0.00 41.12 2.24
4035 5523 7.089106 TGAAAATCATGATTTCCCCCTTTTT 57.911 32.000 29.08 14.25 39.88 1.94
4036 5524 6.700845 TGAAAATCATGATTTCCCCCTTTT 57.299 33.333 29.08 14.90 39.88 2.27
4037 5525 6.700845 TTGAAAATCATGATTTCCCCCTTT 57.299 33.333 29.08 14.92 39.88 3.11
4038 5526 6.700845 TTTGAAAATCATGATTTCCCCCTT 57.299 33.333 29.08 15.57 39.88 3.95
4039 5527 6.444493 TCATTTGAAAATCATGATTTCCCCCT 59.556 34.615 29.08 16.23 39.88 4.79
4040 5528 6.652053 TCATTTGAAAATCATGATTTCCCCC 58.348 36.000 29.08 19.38 39.88 5.40
4041 5529 7.988599 TCATCATTTGAAAATCATGATTTCCCC 59.011 33.333 29.08 21.33 39.88 4.81
4042 5530 8.951787 TCATCATTTGAAAATCATGATTTCCC 57.048 30.769 29.08 23.31 39.88 3.97
4046 5534 9.938280 ACTGTTCATCATTTGAAAATCATGATT 57.062 25.926 15.36 15.36 45.71 2.57
4048 5536 9.844790 GTACTGTTCATCATTTGAAAATCATGA 57.155 29.630 0.00 0.00 45.71 3.07
4049 5537 9.628746 TGTACTGTTCATCATTTGAAAATCATG 57.371 29.630 0.00 0.00 45.71 3.07
4051 5539 9.628746 CATGTACTGTTCATCATTTGAAAATCA 57.371 29.630 0.00 0.00 45.71 2.57
4052 5540 8.589629 GCATGTACTGTTCATCATTTGAAAATC 58.410 33.333 0.00 0.00 45.71 2.17
4053 5541 8.089597 TGCATGTACTGTTCATCATTTGAAAAT 58.910 29.630 0.00 0.00 45.71 1.82
4054 5542 7.381948 GTGCATGTACTGTTCATCATTTGAAAA 59.618 33.333 6.69 0.00 45.71 2.29
4055 5543 6.862608 GTGCATGTACTGTTCATCATTTGAAA 59.137 34.615 6.69 0.00 45.71 2.69
4056 5544 6.207221 AGTGCATGTACTGTTCATCATTTGAA 59.793 34.615 16.23 0.00 42.09 2.69
4057 5545 5.706833 AGTGCATGTACTGTTCATCATTTGA 59.293 36.000 16.23 0.00 0.00 2.69
4058 5546 5.798434 CAGTGCATGTACTGTTCATCATTTG 59.202 40.000 29.45 6.42 42.38 2.32
4059 5547 5.946298 CAGTGCATGTACTGTTCATCATTT 58.054 37.500 29.45 0.00 42.38 2.32
4060 5548 5.556355 CAGTGCATGTACTGTTCATCATT 57.444 39.130 29.45 0.00 42.38 2.57
4070 5558 5.921962 TCATAGAGAACAGTGCATGTACT 57.078 39.130 11.03 11.03 43.00 2.73
4071 5559 6.968131 TTTCATAGAGAACAGTGCATGTAC 57.032 37.500 5.71 5.71 43.00 2.90
4072 5560 7.414429 GCATTTTCATAGAGAACAGTGCATGTA 60.414 37.037 0.00 0.00 43.00 2.29
4073 5561 6.624423 GCATTTTCATAGAGAACAGTGCATGT 60.624 38.462 0.00 0.00 46.97 3.21
4074 5562 5.742453 GCATTTTCATAGAGAACAGTGCATG 59.258 40.000 0.00 0.00 35.56 4.06
4075 5563 5.416639 TGCATTTTCATAGAGAACAGTGCAT 59.583 36.000 0.00 0.00 36.31 3.96
4076 5564 4.761227 TGCATTTTCATAGAGAACAGTGCA 59.239 37.500 0.00 0.00 37.49 4.57
4077 5565 5.300969 TGCATTTTCATAGAGAACAGTGC 57.699 39.130 0.00 0.00 35.56 4.40
4078 5566 7.080353 TCATGCATTTTCATAGAGAACAGTG 57.920 36.000 0.00 0.00 35.56 3.66
4079 5567 7.692460 TTCATGCATTTTCATAGAGAACAGT 57.308 32.000 0.00 0.00 35.56 3.55
4080 5568 9.582431 AAATTCATGCATTTTCATAGAGAACAG 57.418 29.630 0.00 0.00 35.56 3.16
4081 5569 9.361315 CAAATTCATGCATTTTCATAGAGAACA 57.639 29.630 0.00 0.00 35.56 3.18
4082 5570 9.362539 ACAAATTCATGCATTTTCATAGAGAAC 57.637 29.630 0.00 0.00 35.56 3.01
4083 5571 9.577110 GACAAATTCATGCATTTTCATAGAGAA 57.423 29.630 0.00 0.00 0.00 2.87
4084 5572 8.963725 AGACAAATTCATGCATTTTCATAGAGA 58.036 29.630 0.00 0.00 0.00 3.10
4085 5573 9.582431 AAGACAAATTCATGCATTTTCATAGAG 57.418 29.630 0.00 0.00 0.00 2.43
4086 5574 9.932207 AAAGACAAATTCATGCATTTTCATAGA 57.068 25.926 0.00 0.00 0.00 1.98
4244 5737 1.062810 GGAGGGAGGAGAAGGAGCTTA 60.063 57.143 0.00 0.00 0.00 3.09
4252 5745 3.010226 CGGGAGGGAGGGAGGAGAA 62.010 68.421 0.00 0.00 0.00 2.87
4275 5768 4.503991 CCCTAGATTGGATCGAAAGGAAGG 60.504 50.000 7.94 6.45 33.26 3.46
4276 5769 4.636249 CCCTAGATTGGATCGAAAGGAAG 58.364 47.826 7.94 0.00 33.26 3.46
4277 5770 3.181454 GCCCTAGATTGGATCGAAAGGAA 60.181 47.826 7.94 0.00 33.26 3.36
4278 5771 2.368875 GCCCTAGATTGGATCGAAAGGA 59.631 50.000 7.94 0.00 33.26 3.36
4279 5772 2.370189 AGCCCTAGATTGGATCGAAAGG 59.630 50.000 0.00 0.00 0.00 3.11
4280 5773 3.760580 AGCCCTAGATTGGATCGAAAG 57.239 47.619 0.00 0.00 0.00 2.62
4281 5774 3.492656 CGAAGCCCTAGATTGGATCGAAA 60.493 47.826 0.00 0.00 32.99 3.46
4282 5775 2.035961 CGAAGCCCTAGATTGGATCGAA 59.964 50.000 0.00 0.00 32.99 3.71
4283 5776 1.613925 CGAAGCCCTAGATTGGATCGA 59.386 52.381 0.00 0.00 32.99 3.59
4284 5777 1.337260 CCGAAGCCCTAGATTGGATCG 60.337 57.143 0.00 0.00 0.00 3.69
4285 5778 1.609320 GCCGAAGCCCTAGATTGGATC 60.609 57.143 0.00 0.00 0.00 3.36
4286 5779 0.398318 GCCGAAGCCCTAGATTGGAT 59.602 55.000 0.00 0.00 0.00 3.41
4352 5845 2.052779 CCATCATCCGCTGCCTAGA 58.947 57.895 0.00 0.00 0.00 2.43
4354 5847 2.427320 GCCATCATCCGCTGCCTA 59.573 61.111 0.00 0.00 0.00 3.93
4409 5902 3.687321 CTGTGTCCCGGAGCCATGG 62.687 68.421 7.63 7.63 0.00 3.66
4410 5903 2.124983 CTGTGTCCCGGAGCCATG 60.125 66.667 0.73 0.00 0.00 3.66
4411 5904 2.607750 ACTGTGTCCCGGAGCCAT 60.608 61.111 0.73 0.00 0.00 4.40
4412 5905 3.311110 GACTGTGTCCCGGAGCCA 61.311 66.667 0.73 0.00 0.00 4.75
4413 5906 4.436998 CGACTGTGTCCCGGAGCC 62.437 72.222 0.73 0.00 0.00 4.70
4415 5908 4.778415 CGCGACTGTGTCCCGGAG 62.778 72.222 0.73 0.00 31.34 4.63
4420 5913 3.916392 CTCCACCGCGACTGTGTCC 62.916 68.421 8.23 0.00 31.71 4.02
4421 5914 2.214181 ATCTCCACCGCGACTGTGTC 62.214 60.000 8.23 0.00 31.71 3.67
4422 5915 2.214181 GATCTCCACCGCGACTGTGT 62.214 60.000 8.23 0.00 31.71 3.72
4423 5916 1.517257 GATCTCCACCGCGACTGTG 60.517 63.158 8.23 7.44 0.00 3.66
4424 5917 2.711922 GGATCTCCACCGCGACTGT 61.712 63.158 8.23 0.00 35.64 3.55
4425 5918 2.105128 GGATCTCCACCGCGACTG 59.895 66.667 8.23 1.47 35.64 3.51
4426 5919 3.518998 CGGATCTCCACCGCGACT 61.519 66.667 8.23 0.00 43.74 4.18
4432 5925 2.187946 CCTGTGCGGATCTCCACC 59.812 66.667 11.82 0.00 35.14 4.61
4433 5926 1.448540 CACCTGTGCGGATCTCCAC 60.449 63.158 8.67 8.67 36.31 4.02
4434 5927 1.888436 GACACCTGTGCGGATCTCCA 61.888 60.000 0.00 0.00 36.31 3.86
4435 5928 1.153549 GACACCTGTGCGGATCTCC 60.154 63.158 0.00 0.00 36.31 3.71
4436 5929 1.153549 GGACACCTGTGCGGATCTC 60.154 63.158 0.00 0.00 36.31 2.75
4437 5930 1.610673 AGGACACCTGTGCGGATCT 60.611 57.895 0.00 0.00 41.53 2.75
4438 5931 1.448540 CAGGACACCTGTGCGGATC 60.449 63.158 9.36 0.00 45.82 3.36
4439 5932 2.665000 CAGGACACCTGTGCGGAT 59.335 61.111 9.36 0.00 45.82 4.18
4447 5940 1.831286 ACGTCGAACCAGGACACCT 60.831 57.895 0.00 0.00 34.04 4.00
4448 5941 1.663702 CACGTCGAACCAGGACACC 60.664 63.158 0.00 0.00 34.04 4.16
4449 5942 1.066918 ACACGTCGAACCAGGACAC 59.933 57.895 0.00 0.00 34.04 3.67
4450 5943 1.066752 CACACGTCGAACCAGGACA 59.933 57.895 0.00 0.00 34.04 4.02
4451 5944 2.308039 GCACACGTCGAACCAGGAC 61.308 63.158 0.00 0.00 0.00 3.85
4452 5945 2.028484 GCACACGTCGAACCAGGA 59.972 61.111 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.