Multiple sequence alignment - TraesCS5A01G387700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G387700 chr5A 100.000 8720 0 0 1 8720 584680548 584671829 0.000000e+00 16103.0
1 TraesCS5A01G387700 chr5A 100.000 41 0 0 7421 7461 584672318 584672278 9.390000e-10 76.8
2 TraesCS5A01G387700 chr5A 100.000 41 0 0 8231 8271 584673128 584673088 9.390000e-10 76.8
3 TraesCS5A01G387700 chr5D 94.117 5201 180 48 1 5118 464284344 464279187 0.000000e+00 7793.0
4 TraesCS5A01G387700 chr5D 96.020 2538 82 12 5327 7855 464279204 464276677 0.000000e+00 4109.0
5 TraesCS5A01G387700 chr5D 88.298 376 13 12 7853 8218 464276646 464276292 1.050000e-113 422.0
6 TraesCS5A01G387700 chr5D 96.078 51 1 1 8301 8351 464276282 464276233 2.020000e-11 82.4
7 TraesCS5A01G387700 chr5D 100.000 41 0 0 8231 8271 464277110 464277070 9.390000e-10 76.8
8 TraesCS5A01G387700 chr5B 95.417 4211 125 28 950 5118 571467974 571463790 0.000000e+00 6645.0
9 TraesCS5A01G387700 chr5B 96.054 2534 86 8 5330 7854 571463804 571461276 0.000000e+00 4113.0
10 TraesCS5A01G387700 chr5B 85.605 917 81 21 4 912 571468848 571467975 0.000000e+00 915.0
11 TraesCS5A01G387700 chr5B 100.000 185 0 0 5141 5325 267758042 267758226 8.380000e-90 342.0
12 TraesCS5A01G387700 chr5B 86.957 253 14 8 7853 8094 571461244 571461000 5.190000e-67 267.0
13 TraesCS5A01G387700 chr5B 81.515 330 46 13 8401 8719 571449800 571449475 3.120000e-64 257.0
14 TraesCS5A01G387700 chr5B 81.570 293 23 7 8434 8720 571450846 571450579 6.860000e-51 213.0
15 TraesCS5A01G387700 chr5B 91.971 137 9 2 8083 8218 571451051 571450916 3.210000e-44 191.0
16 TraesCS5A01G387700 chr5B 100.000 41 0 0 8231 8271 571461707 571461667 9.390000e-10 76.8
17 TraesCS5A01G387700 chr5B 97.436 39 0 1 8301 8339 571450902 571450865 2.030000e-06 65.8
18 TraesCS5A01G387700 chr6B 98.454 194 2 1 5141 5334 583448105 583447913 3.010000e-89 340.0
19 TraesCS5A01G387700 chr6B 98.936 188 2 0 5141 5328 20920577 20920390 3.900000e-88 337.0
20 TraesCS5A01G387700 chr4A 98.942 189 2 0 5141 5329 456485527 456485715 1.080000e-88 339.0
21 TraesCS5A01G387700 chr4A 98.942 189 2 0 5141 5329 456486332 456486520 1.080000e-88 339.0
22 TraesCS5A01G387700 chr4A 98.942 189 2 0 5141 5329 456487127 456487315 1.080000e-88 339.0
23 TraesCS5A01G387700 chr4A 99.462 186 1 0 5141 5326 529621095 529621280 1.080000e-88 339.0
24 TraesCS5A01G387700 chr4A 100.000 31 0 0 5117 5147 521841917 521841887 3.400000e-04 58.4
25 TraesCS5A01G387700 chr3A 99.462 186 1 0 5141 5326 83748866 83748681 1.080000e-88 339.0
26 TraesCS5A01G387700 chr7A 98.429 191 3 0 5135 5325 15837921 15838111 3.900000e-88 337.0
27 TraesCS5A01G387700 chr2D 77.632 152 29 3 1 152 74971860 74972006 4.340000e-13 87.9
28 TraesCS5A01G387700 chr6D 86.667 75 8 1 74 148 262193081 262193153 2.020000e-11 82.4
29 TraesCS5A01G387700 chr2B 85.714 77 11 0 74 150 114066259 114066335 2.020000e-11 82.4
30 TraesCS5A01G387700 chrUn 96.875 32 1 0 5116 5147 8841334 8841303 4.000000e-03 54.7
31 TraesCS5A01G387700 chrUn 96.875 32 1 0 5116 5147 11849427 11849396 4.000000e-03 54.7
32 TraesCS5A01G387700 chrUn 96.875 32 1 0 5116 5147 34213980 34213949 4.000000e-03 54.7
33 TraesCS5A01G387700 chrUn 100.000 29 0 0 5116 5144 40706753 40706781 4.000000e-03 54.7
34 TraesCS5A01G387700 chrUn 96.875 32 1 0 5116 5147 41799748 41799717 4.000000e-03 54.7
35 TraesCS5A01G387700 chrUn 100.000 29 0 0 5116 5144 48289121 48289149 4.000000e-03 54.7
36 TraesCS5A01G387700 chrUn 100.000 29 0 0 5116 5144 71055661 71055689 4.000000e-03 54.7
37 TraesCS5A01G387700 chr7D 96.875 32 1 0 117 148 175665448 175665417 4.000000e-03 54.7
38 TraesCS5A01G387700 chr3B 94.444 36 1 1 5116 5151 605011108 605011074 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G387700 chr5A 584671829 584680548 8719 True 16103.00 16103 100.0000 1 8720 1 chr5A.!!$R1 8719
1 TraesCS5A01G387700 chr5D 464276233 464284344 8111 True 2496.64 7793 94.9026 1 8351 5 chr5D.!!$R1 8350
2 TraesCS5A01G387700 chr5B 571461000 571468848 7848 True 2403.36 6645 92.8066 4 8271 5 chr5B.!!$R2 8267
3 TraesCS5A01G387700 chr4A 456485527 456487315 1788 False 339.00 339 98.9420 5141 5329 3 chr4A.!!$F2 188

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
525 528 0.108377 CGGATGACATGACCGGTTCA 60.108 55.000 9.42 9.21 42.48 3.18 F
1682 1748 0.107945 GCAAAGAGAGGCGAGTCCAT 60.108 55.000 0.00 0.00 37.29 3.41 F
1878 1953 0.034059 AAGACGGTGGCAAGTCAGAG 59.966 55.000 21.32 0.00 39.67 3.35 F
3534 3611 2.309755 TCTGGCAAACTGGAATCCTGAT 59.690 45.455 13.27 0.00 0.00 2.90 F
4254 4331 1.505425 GTACTTGGACCCACGTTCAC 58.495 55.000 3.47 0.00 30.96 3.18 F
5130 5266 0.099436 CATTTGTAGCTCCCGCTTGC 59.901 55.000 0.00 0.00 46.47 4.01 F
5131 5267 1.369091 ATTTGTAGCTCCCGCTTGCG 61.369 55.000 8.14 8.14 46.47 4.85 F
5927 6701 1.631388 TCCGTTCATTCCCAAGCCTTA 59.369 47.619 0.00 0.00 0.00 2.69 F
5928 6702 2.017049 CCGTTCATTCCCAAGCCTTAG 58.983 52.381 0.00 0.00 0.00 2.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1686 1752 1.027357 GTGCGATCTTGCCATTGGAT 58.973 50.000 6.95 0.00 0.00 3.41 R
3056 3133 1.300233 GATAGTTGGCGCTCCTCCG 60.300 63.158 7.64 0.00 0.00 4.63 R
3652 3729 2.930168 GCAACGGATGCGCTTTTAG 58.070 52.632 9.73 0.42 46.87 1.85 R
4714 4849 1.488393 TGTGATCATATCGCCCAACCA 59.512 47.619 0.00 0.00 38.99 3.67 R
5903 6677 1.200020 GCTTGGGAATGAACGGAACAG 59.800 52.381 0.00 0.00 0.00 3.16 R
6407 7181 2.228822 AGCATAAACAAGAACTTGGCCG 59.771 45.455 17.05 4.21 44.45 6.13 R
6540 7320 3.130516 TCTGGTACTTAGCATTCACGGAG 59.869 47.826 0.00 0.00 32.73 4.63 R
7302 8083 0.539986 TTCCTTCACATAGGTCGCCC 59.460 55.000 0.00 0.00 36.63 6.13 R
7918 8738 1.248101 AAGTTTCAATTCGCCCCCGG 61.248 55.000 0.00 0.00 34.56 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.846371 GTTGAGAGCATGCTCCGTT 58.154 52.632 37.79 23.78 43.70 4.44
43 44 9.665719 TTGCATACTATGTGTCTTTAAGAATCA 57.334 29.630 0.00 0.00 0.00 2.57
44 45 9.836864 TGCATACTATGTGTCTTTAAGAATCAT 57.163 29.630 14.09 14.09 0.00 2.45
67 68 4.562789 TCTTCATCATCGTCGTTTGATCAC 59.437 41.667 0.00 0.00 30.24 3.06
71 72 3.595173 TCATCGTCGTTTGATCACCATT 58.405 40.909 0.00 0.00 0.00 3.16
100 101 2.094182 TCCATGAACTCGGTGTAGAAGC 60.094 50.000 0.00 0.00 0.00 3.86
226 227 1.363530 ATGGATTGGGGCTACCTGGG 61.364 60.000 0.00 0.00 41.11 4.45
245 246 4.519610 GGCAACTGGATTGTGGGT 57.480 55.556 0.00 0.00 40.77 4.51
274 276 2.686816 CGTAGGCAAAGTTGGGCGG 61.687 63.158 0.00 0.00 35.71 6.13
299 301 2.980233 GGTGGAGCAGCGCAAGTT 60.980 61.111 11.47 0.00 41.68 2.66
323 325 2.951475 AAGGCCTTGGCAACGTTCGA 62.951 55.000 19.73 0.00 42.51 3.71
376 378 5.336213 GGAGCATGAATATAAAGCACATGGG 60.336 44.000 0.00 0.00 38.76 4.00
419 421 7.777440 AGAATGAGATCTTTGGATAGGGTTTTC 59.223 37.037 0.00 0.00 31.46 2.29
420 422 6.387192 TGAGATCTTTGGATAGGGTTTTCA 57.613 37.500 0.00 0.00 31.46 2.69
452 454 1.184970 TGTCGGAGTCTGACATGGCA 61.185 55.000 27.45 0.00 41.20 4.92
454 456 1.153489 CGGAGTCTGACATGGCAGG 60.153 63.158 28.28 8.08 36.55 4.85
525 528 0.108377 CGGATGACATGACCGGTTCA 60.108 55.000 9.42 9.21 42.48 3.18
559 562 1.663695 CCGTCGTTGGATGGCTAAAT 58.336 50.000 0.00 0.00 42.23 1.40
690 735 3.815337 TTTTGAGTCGACGAGAGAGAG 57.185 47.619 10.46 0.00 0.00 3.20
691 736 1.728068 TTGAGTCGACGAGAGAGAGG 58.272 55.000 10.46 0.00 0.00 3.69
693 738 1.002201 TGAGTCGACGAGAGAGAGGTT 59.998 52.381 10.46 0.00 0.00 3.50
695 740 0.448593 GTCGACGAGAGAGAGGTTGG 59.551 60.000 0.00 0.00 0.00 3.77
697 742 0.882474 CGACGAGAGAGAGGTTGGTT 59.118 55.000 0.00 0.00 0.00 3.67
698 743 1.401670 CGACGAGAGAGAGGTTGGTTG 60.402 57.143 0.00 0.00 0.00 3.77
836 886 4.029809 GTAAGGCAGCCCCGTGGT 62.030 66.667 8.22 0.00 39.21 4.16
942 995 2.770748 CCCCCATCCATCTCTCTCC 58.229 63.158 0.00 0.00 0.00 3.71
943 996 0.193069 CCCCCATCCATCTCTCTCCT 59.807 60.000 0.00 0.00 0.00 3.69
945 998 1.149711 CCCCATCCATCTCTCTCCTCT 59.850 57.143 0.00 0.00 0.00 3.69
947 1000 2.250031 CCATCCATCTCTCTCCTCTGG 58.750 57.143 0.00 0.00 0.00 3.86
948 1001 2.426121 CCATCCATCTCTCTCCTCTGGT 60.426 54.545 0.00 0.00 0.00 4.00
980 1033 2.265739 CGCAGCAGTAGAGCCCAA 59.734 61.111 0.00 0.00 34.23 4.12
1124 1183 2.273449 CCGCCTGGATGCCTTCTT 59.727 61.111 0.00 0.00 37.49 2.52
1313 1377 2.842394 ATTCGCTGCCTCTCACACCG 62.842 60.000 0.00 0.00 0.00 4.94
1505 1569 7.015877 ACAGGTTCTGTACTGTAATTTCACCTA 59.984 37.037 0.00 0.00 45.45 3.08
1527 1593 7.036425 ACCTACCCCCAGTTCTTAATTTCATAA 60.036 37.037 0.00 0.00 0.00 1.90
1680 1746 4.193653 GCAAAGAGAGGCGAGTCC 57.806 61.111 0.00 0.00 0.00 3.85
1681 1747 1.293498 GCAAAGAGAGGCGAGTCCA 59.707 57.895 0.00 0.00 37.29 4.02
1682 1748 0.107945 GCAAAGAGAGGCGAGTCCAT 60.108 55.000 0.00 0.00 37.29 3.41
1683 1749 1.649664 CAAAGAGAGGCGAGTCCATG 58.350 55.000 0.00 0.00 37.29 3.66
1684 1750 0.107945 AAAGAGAGGCGAGTCCATGC 60.108 55.000 0.00 0.00 37.29 4.06
1685 1751 1.260538 AAGAGAGGCGAGTCCATGCA 61.261 55.000 0.00 0.00 37.29 3.96
1686 1752 1.219124 GAGAGGCGAGTCCATGCAA 59.781 57.895 0.00 0.00 37.29 4.08
1702 1777 1.406180 TGCAATCCAATGGCAAGATCG 59.594 47.619 0.00 0.00 34.05 3.69
1709 1784 0.659427 AATGGCAAGATCGCACATCG 59.341 50.000 0.00 0.00 40.15 3.84
1765 1840 3.236816 GTGTATGTGTTTGCTGTGCATC 58.763 45.455 0.00 0.00 38.76 3.91
1855 1930 1.083489 CCGTTCGCTCTTGCCATTTA 58.917 50.000 0.00 0.00 35.36 1.40
1873 1948 5.105917 CCATTTAATAAAGACGGTGGCAAGT 60.106 40.000 0.00 0.00 0.00 3.16
1878 1953 0.034059 AAGACGGTGGCAAGTCAGAG 59.966 55.000 21.32 0.00 39.67 3.35
2059 2135 4.201910 TGCCGCATAGCTTTATTTCTGTTC 60.202 41.667 0.00 0.00 0.00 3.18
2064 2140 8.345565 CCGCATAGCTTTATTTCTGTTCTTTAT 58.654 33.333 0.00 0.00 0.00 1.40
2092 2168 8.507249 GCATACAGCTTAATTTATGTTAGAGGG 58.493 37.037 0.00 0.00 41.15 4.30
2119 2195 8.907222 AGAAACAAAGGCATGATTTACAAATT 57.093 26.923 0.00 0.00 0.00 1.82
2127 2203 6.664816 AGGCATGATTTACAAATTCCTTCTGA 59.335 34.615 0.00 0.00 0.00 3.27
2128 2204 6.976925 GGCATGATTTACAAATTCCTTCTGAG 59.023 38.462 0.00 0.00 0.00 3.35
2142 2218 9.652114 AATTCCTTCTGAGCCATTTCTTATATT 57.348 29.630 0.00 0.00 0.00 1.28
2169 2245 4.563337 TTATATGTCTGTACGCGAGCTT 57.437 40.909 15.93 0.00 0.00 3.74
2368 2444 3.066621 TGTGCACTCAGTGGAAAAATGTC 59.933 43.478 19.41 0.00 35.32 3.06
2414 2490 8.484214 TCTATTTATCTGACTATTCCTGTGCT 57.516 34.615 0.00 0.00 0.00 4.40
2810 2887 4.039973 AGTGACCGAAACTTGAATGGAGTA 59.960 41.667 0.00 0.00 0.00 2.59
2921 2998 5.009631 TGTTCCCCATTTAACTCATGACAG 58.990 41.667 0.00 0.00 0.00 3.51
2925 3002 6.785076 TCCCCATTTAACTCATGACAGTAAA 58.215 36.000 0.00 0.00 0.00 2.01
2966 3043 8.868522 TTGGTCTGTCAGATTTCTTATTGATT 57.131 30.769 5.68 0.00 0.00 2.57
3056 3133 5.049680 TGCGGAACTGTTCTCAAGTTATTTC 60.050 40.000 19.05 0.00 0.00 2.17
3347 3424 4.861196 AGACTCAGAGACAGCTATTACCA 58.139 43.478 3.79 0.00 0.00 3.25
3400 3477 9.352191 ACTTGTCGAGGTACTTGTTCTATATAT 57.648 33.333 0.00 0.00 41.55 0.86
3534 3611 2.309755 TCTGGCAAACTGGAATCCTGAT 59.690 45.455 13.27 0.00 0.00 2.90
3652 3729 6.372659 TGACATTAGCTCTTTGAAGGATCAAC 59.627 38.462 0.00 0.00 45.01 3.18
3786 3863 5.047590 TGAAATGAGATTGCTTTGTGATGCT 60.048 36.000 0.00 0.00 0.00 3.79
3795 3872 5.199024 TGCTTTGTGATGCTAATTGTGTT 57.801 34.783 0.00 0.00 0.00 3.32
4053 4130 8.396272 AGGCAAGTATTACCATAAATGACATC 57.604 34.615 0.00 0.00 32.43 3.06
4122 4199 3.476552 TCTAAACAACACTCCCTGCTTG 58.523 45.455 0.00 0.00 0.00 4.01
4254 4331 1.505425 GTACTTGGACCCACGTTCAC 58.495 55.000 3.47 0.00 30.96 3.18
4281 4366 4.699257 CAGCTTCTTTCCATAGCTCAAAGT 59.301 41.667 0.00 0.00 43.04 2.66
4339 4424 3.779573 GACTCTTGTCTTTGCGAGTTC 57.220 47.619 0.00 0.00 39.94 3.01
4346 4431 4.521130 TGTCTTTGCGAGTTCTGTATCT 57.479 40.909 0.00 0.00 0.00 1.98
4446 4579 5.830457 TGGTCATTTGTGGTCATAACTTGAA 59.170 36.000 0.00 0.00 35.70 2.69
4504 4639 3.389656 GCCTATCTTCTTAGCAGAACCCT 59.610 47.826 0.00 0.00 33.80 4.34
4516 4651 9.396022 TCTTAGCAGAACCCTATTATTTTCTTG 57.604 33.333 0.00 0.00 0.00 3.02
4523 4658 6.530019 ACCCTATTATTTTCTTGTGCTTGG 57.470 37.500 0.00 0.00 0.00 3.61
4555 4690 3.472652 TGTATTCCTCAACAAGCACGTT 58.527 40.909 0.00 0.00 0.00 3.99
4599 4734 6.503524 TGAAGTTGTTTTAGTCAAAGCATCC 58.496 36.000 0.00 0.00 35.19 3.51
4600 4735 6.321181 TGAAGTTGTTTTAGTCAAAGCATCCT 59.679 34.615 0.00 0.00 35.19 3.24
4714 4849 5.245526 ACCTATCTTGACCGTAACAGTCTTT 59.754 40.000 0.00 0.00 35.21 2.52
4715 4850 5.577164 CCTATCTTGACCGTAACAGTCTTTG 59.423 44.000 0.00 0.00 35.21 2.77
4716 4851 3.724374 TCTTGACCGTAACAGTCTTTGG 58.276 45.455 0.00 0.00 35.21 3.28
4868 5004 4.100373 AGAATGCTATCATCTCTACCCCC 58.900 47.826 0.00 0.00 31.27 5.40
5024 5160 0.606604 AGAACCACGAGCCGTATGTT 59.393 50.000 11.67 11.67 38.32 2.71
5115 5251 9.574516 AGTTCTATCTTGGTACTTTTGACATTT 57.425 29.630 0.00 0.00 0.00 2.32
5116 5252 9.612620 GTTCTATCTTGGTACTTTTGACATTTG 57.387 33.333 0.00 0.00 0.00 2.32
5117 5253 8.918202 TCTATCTTGGTACTTTTGACATTTGT 57.082 30.769 0.00 0.00 0.00 2.83
5120 5256 6.966021 TCTTGGTACTTTTGACATTTGTAGC 58.034 36.000 0.00 0.00 33.76 3.58
5121 5257 6.770785 TCTTGGTACTTTTGACATTTGTAGCT 59.229 34.615 0.00 0.00 34.13 3.32
5122 5258 6.554334 TGGTACTTTTGACATTTGTAGCTC 57.446 37.500 0.00 0.00 34.13 4.09
5123 5259 5.472137 TGGTACTTTTGACATTTGTAGCTCC 59.528 40.000 0.00 0.00 34.13 4.70
5124 5260 5.106277 GGTACTTTTGACATTTGTAGCTCCC 60.106 44.000 0.00 0.00 0.00 4.30
5125 5261 3.502211 ACTTTTGACATTTGTAGCTCCCG 59.498 43.478 0.00 0.00 0.00 5.14
5126 5262 1.448985 TTGACATTTGTAGCTCCCGC 58.551 50.000 0.00 0.00 0.00 6.13
5128 5264 1.003118 TGACATTTGTAGCTCCCGCTT 59.997 47.619 0.00 0.00 46.47 4.68
5129 5265 1.398390 GACATTTGTAGCTCCCGCTTG 59.602 52.381 0.00 0.00 46.47 4.01
5130 5266 0.099436 CATTTGTAGCTCCCGCTTGC 59.901 55.000 0.00 0.00 46.47 4.01
5131 5267 1.369091 ATTTGTAGCTCCCGCTTGCG 61.369 55.000 8.14 8.14 46.47 4.85
5134 5270 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
5617 6384 3.051940 AGATACCTCTCCATGCTTCCA 57.948 47.619 0.00 0.00 0.00 3.53
5903 6677 3.249559 GGCTGTTAGCTATGCATTGACTC 59.750 47.826 12.54 0.00 41.99 3.36
5927 6701 1.631388 TCCGTTCATTCCCAAGCCTTA 59.369 47.619 0.00 0.00 0.00 2.69
5928 6702 2.017049 CCGTTCATTCCCAAGCCTTAG 58.983 52.381 0.00 0.00 0.00 2.18
5955 6729 6.743575 TTTCATTCAGCTAAGAAGGCTTAC 57.256 37.500 0.00 0.00 38.03 2.34
5973 6747 5.705905 GGCTTACCTTACAGTTCTGTCATTT 59.294 40.000 8.80 0.00 0.00 2.32
6043 6817 7.806680 TTATAGTGATCATATGGCCCTTGTA 57.193 36.000 0.00 0.00 0.00 2.41
6323 7097 4.477780 CCAACAATTTCCATTGCATTTGC 58.522 39.130 0.00 0.00 43.39 3.68
6339 7113 5.353938 GCATTTGCATTACATGGAAGACAT 58.646 37.500 0.00 0.00 41.64 3.06
6407 7181 3.274288 GTCCTTCAAGACCATGGATGAC 58.726 50.000 21.47 3.62 0.00 3.06
6469 7243 3.698040 GTCCTGAAATGCTCATGTCCAAT 59.302 43.478 0.00 0.00 32.14 3.16
6470 7244 3.697542 TCCTGAAATGCTCATGTCCAATG 59.302 43.478 0.00 0.00 32.14 2.82
6489 7263 5.221422 CCAATGCCCCGTTTAATACATCATT 60.221 40.000 0.00 0.00 0.00 2.57
6540 7320 7.012421 ACTCTGACATTAAGGTTTGTTCAGAAC 59.988 37.037 6.32 6.32 33.64 3.01
6543 7323 6.262273 TGACATTAAGGTTTGTTCAGAACTCC 59.738 38.462 14.51 13.00 0.00 3.85
6732 7512 8.602328 TGTCAAATGCTTTGTCTTTGTATTTTG 58.398 29.630 8.01 0.00 41.36 2.44
6733 7513 7.583762 GTCAAATGCTTTGTCTTTGTATTTTGC 59.416 33.333 8.01 0.00 41.36 3.68
6734 7514 7.279536 TCAAATGCTTTGTCTTTGTATTTTGCA 59.720 29.630 8.01 0.00 41.36 4.08
6735 7515 7.733402 AATGCTTTGTCTTTGTATTTTGCAT 57.267 28.000 0.00 0.00 38.78 3.96
6773 7553 7.093112 ACTGATCTATGCCTTCTAACTTGTCTT 60.093 37.037 0.00 0.00 0.00 3.01
6929 7709 8.918961 CAATTAATTTGGAAGGCGTTATACAA 57.081 30.769 0.00 0.00 0.00 2.41
7028 7808 5.505173 AATTACAATCCTCTGCCATTTCG 57.495 39.130 0.00 0.00 0.00 3.46
7100 7881 8.768955 CCTCTGAATATAAAGCATGTGTTACTC 58.231 37.037 0.00 0.00 0.00 2.59
7134 7915 7.636326 ACGTGTCACCAGTAAGAAATTAAAAG 58.364 34.615 0.00 0.00 0.00 2.27
7269 8050 3.295093 TGACATTCACAAGGAAGGCAAA 58.705 40.909 0.00 0.00 40.88 3.68
7584 8365 2.026301 GACGCCGCGATAGAAGCT 59.974 61.111 21.79 0.00 39.76 3.74
7707 8488 4.142966 CCAAGGAAACGGACGAGAAATAAC 60.143 45.833 0.00 0.00 0.00 1.89
7723 8504 7.640240 CGAGAAATAACCCGAAGAAATGATTTC 59.360 37.037 9.82 9.82 39.96 2.17
7742 8523 4.365514 TTCTGCAAGGTTAGGTTCATCA 57.634 40.909 0.00 0.00 0.00 3.07
7801 8582 3.760261 TATTGGATGCACTGTGCCCCC 62.760 57.143 28.17 26.11 44.23 5.40
7809 8590 0.038744 CACTGTGCCCCCAGAAAGAT 59.961 55.000 0.00 0.00 36.30 2.40
7913 8733 9.554724 CATGTGTTTGATACTGTGTTATTTACC 57.445 33.333 0.00 0.00 0.00 2.85
7918 8738 9.769093 GTTTGATACTGTGTTATTTACCATCAC 57.231 33.333 0.00 0.00 0.00 3.06
7920 8740 6.759356 TGATACTGTGTTATTTACCATCACCG 59.241 38.462 0.00 0.00 0.00 4.94
8021 8924 5.171339 ACCACTGAAGCTGAGATTTGTAT 57.829 39.130 0.00 0.00 0.00 2.29
8076 8979 0.761323 TTCCACTCCGTTGGTCCTCA 60.761 55.000 0.00 0.00 37.93 3.86
8082 8985 1.228124 CCGTTGGTCCTCAAGGCAA 60.228 57.895 0.00 0.00 39.24 4.52
8083 8986 1.515521 CCGTTGGTCCTCAAGGCAAC 61.516 60.000 8.63 8.63 39.24 4.17
8084 8987 1.515521 CGTTGGTCCTCAAGGCAACC 61.516 60.000 11.57 6.88 35.86 3.77
8085 8988 0.178990 GTTGGTCCTCAAGGCAACCT 60.179 55.000 8.06 0.00 34.29 3.50
8087 8990 1.352622 TGGTCCTCAAGGCAACCTGT 61.353 55.000 8.06 0.00 34.22 4.00
8133 9039 7.465989 CAAATGCATTCAAGTTGAGTGTTTTT 58.534 30.769 24.21 20.21 36.60 1.94
8218 9124 7.808381 TGAGTTTCTCGTCTAAGAAATACAGTG 59.192 37.037 2.72 0.00 44.64 3.66
8219 9125 7.091443 AGTTTCTCGTCTAAGAAATACAGTGG 58.909 38.462 2.72 0.00 44.64 4.00
8221 9127 5.950883 TCTCGTCTAAGAAATACAGTGGTG 58.049 41.667 0.00 0.00 0.00 4.17
8222 9128 5.068234 TCGTCTAAGAAATACAGTGGTGG 57.932 43.478 0.00 0.00 0.00 4.61
8223 9129 4.525487 TCGTCTAAGAAATACAGTGGTGGT 59.475 41.667 0.00 0.00 0.00 4.16
8224 9130 5.011329 TCGTCTAAGAAATACAGTGGTGGTT 59.989 40.000 0.00 0.00 0.00 3.67
8227 9133 6.001460 TCTAAGAAATACAGTGGTGGTTTGG 58.999 40.000 0.00 0.00 0.00 3.28
8228 9134 3.496331 AGAAATACAGTGGTGGTTTGGG 58.504 45.455 0.00 0.00 0.00 4.12
8229 9135 3.117284 AGAAATACAGTGGTGGTTTGGGT 60.117 43.478 0.00 0.00 0.00 4.51
8231 9137 1.513858 TACAGTGGTGGTTTGGGTCT 58.486 50.000 0.00 0.00 0.00 3.85
8232 9138 0.106719 ACAGTGGTGGTTTGGGTCTG 60.107 55.000 0.00 0.00 0.00 3.51
8234 9140 1.454847 GTGGTGGTTTGGGTCTGCA 60.455 57.895 0.00 0.00 0.00 4.41
8235 9141 1.152777 TGGTGGTTTGGGTCTGCAG 60.153 57.895 7.63 7.63 0.00 4.41
8236 9142 1.150536 GGTGGTTTGGGTCTGCAGA 59.849 57.895 13.74 13.74 0.00 4.26
8237 9143 1.172812 GGTGGTTTGGGTCTGCAGAC 61.173 60.000 34.25 34.25 44.04 3.51
8251 9157 3.473147 CAGACCTTGCTGATGAGGG 57.527 57.895 0.00 0.00 38.14 4.30
8252 9158 0.747283 CAGACCTTGCTGATGAGGGC 60.747 60.000 0.00 0.00 41.68 5.19
8253 9159 1.203441 AGACCTTGCTGATGAGGGCA 61.203 55.000 0.00 0.00 43.94 5.36
8254 9160 0.747283 GACCTTGCTGATGAGGGCAG 60.747 60.000 0.00 0.00 40.98 4.85
8255 9161 1.453379 CCTTGCTGATGAGGGCAGG 60.453 63.158 0.00 0.00 39.68 4.85
8256 9162 2.044650 TTGCTGATGAGGGCAGGC 60.045 61.111 0.00 0.00 39.68 4.85
8257 9163 3.650298 TTGCTGATGAGGGCAGGCC 62.650 63.158 4.33 4.33 39.68 5.19
8258 9164 4.119363 GCTGATGAGGGCAGGCCA 62.119 66.667 16.94 0.00 37.98 5.36
8259 9165 2.124403 CTGATGAGGGCAGGCCAC 60.124 66.667 16.94 9.99 37.98 5.01
8260 9166 2.934932 TGATGAGGGCAGGCCACA 60.935 61.111 15.67 15.67 37.98 4.17
8261 9167 2.439156 GATGAGGGCAGGCCACAC 60.439 66.667 15.65 6.60 37.98 3.82
8262 9168 4.415150 ATGAGGGCAGGCCACACG 62.415 66.667 15.65 0.00 37.98 4.49
8272 9178 2.594592 GCCACACGCCTCCAAACT 60.595 61.111 0.00 0.00 0.00 2.66
8273 9179 2.908073 GCCACACGCCTCCAAACTG 61.908 63.158 0.00 0.00 0.00 3.16
8274 9180 2.260869 CCACACGCCTCCAAACTGG 61.261 63.158 0.00 0.00 39.43 4.00
8275 9181 1.525995 CACACGCCTCCAAACTGGT 60.526 57.895 0.00 0.00 39.03 4.00
8276 9182 1.525995 ACACGCCTCCAAACTGGTG 60.526 57.895 0.00 0.00 39.03 4.17
8280 9186 3.763671 CCTCCAAACTGGTGGTGC 58.236 61.111 5.75 0.00 44.14 5.01
8281 9187 1.151450 CCTCCAAACTGGTGGTGCT 59.849 57.895 5.75 0.00 44.14 4.40
8282 9188 0.890996 CCTCCAAACTGGTGGTGCTC 60.891 60.000 5.75 0.00 44.14 4.26
8283 9189 0.890996 CTCCAAACTGGTGGTGCTCC 60.891 60.000 0.00 0.00 39.03 4.70
8284 9190 1.151450 CCAAACTGGTGGTGCTCCT 59.849 57.895 6.34 0.00 33.63 3.69
8285 9191 0.468029 CCAAACTGGTGGTGCTCCTT 60.468 55.000 6.34 0.00 33.63 3.36
8286 9192 1.402787 CAAACTGGTGGTGCTCCTTT 58.597 50.000 6.34 0.00 34.23 3.11
8287 9193 1.338020 CAAACTGGTGGTGCTCCTTTC 59.662 52.381 6.34 0.00 34.23 2.62
8288 9194 0.178990 AACTGGTGGTGCTCCTTTCC 60.179 55.000 6.34 6.81 34.23 3.13
8289 9195 1.062488 ACTGGTGGTGCTCCTTTCCT 61.062 55.000 6.34 0.00 34.23 3.36
8290 9196 0.322008 CTGGTGGTGCTCCTTTCCTC 60.322 60.000 6.34 0.00 34.23 3.71
8291 9197 0.768221 TGGTGGTGCTCCTTTCCTCT 60.768 55.000 6.34 0.00 34.23 3.69
8292 9198 0.035915 GGTGGTGCTCCTTTCCTCTC 60.036 60.000 6.34 0.00 34.23 3.20
8293 9199 0.687354 GTGGTGCTCCTTTCCTCTCA 59.313 55.000 6.34 0.00 34.23 3.27
8294 9200 1.072331 GTGGTGCTCCTTTCCTCTCAA 59.928 52.381 6.34 0.00 34.23 3.02
8295 9201 1.774254 TGGTGCTCCTTTCCTCTCAAA 59.226 47.619 6.34 0.00 34.23 2.69
8296 9202 2.376518 TGGTGCTCCTTTCCTCTCAAAT 59.623 45.455 6.34 0.00 34.23 2.32
8297 9203 3.013219 GGTGCTCCTTTCCTCTCAAATC 58.987 50.000 0.00 0.00 0.00 2.17
8298 9204 3.013219 GTGCTCCTTTCCTCTCAAATCC 58.987 50.000 0.00 0.00 0.00 3.01
8299 9205 2.644299 TGCTCCTTTCCTCTCAAATCCA 59.356 45.455 0.00 0.00 0.00 3.41
8300 9206 3.267812 TGCTCCTTTCCTCTCAAATCCAT 59.732 43.478 0.00 0.00 0.00 3.41
8301 9207 4.474651 TGCTCCTTTCCTCTCAAATCCATA 59.525 41.667 0.00 0.00 0.00 2.74
8302 9208 4.819088 GCTCCTTTCCTCTCAAATCCATAC 59.181 45.833 0.00 0.00 0.00 2.39
8303 9209 5.372373 CTCCTTTCCTCTCAAATCCATACC 58.628 45.833 0.00 0.00 0.00 2.73
8304 9210 4.788075 TCCTTTCCTCTCAAATCCATACCA 59.212 41.667 0.00 0.00 0.00 3.25
8305 9211 5.252863 TCCTTTCCTCTCAAATCCATACCAA 59.747 40.000 0.00 0.00 0.00 3.67
8306 9212 5.358160 CCTTTCCTCTCAAATCCATACCAAC 59.642 44.000 0.00 0.00 0.00 3.77
8307 9213 5.779241 TTCCTCTCAAATCCATACCAACT 57.221 39.130 0.00 0.00 0.00 3.16
8344 9250 4.274459 CAGGTTATGATGTTAGAAGGCAGC 59.726 45.833 0.00 0.00 0.00 5.25
8361 9267 4.351938 CGTGGAGCGAACCGGTGA 62.352 66.667 8.52 0.00 44.77 4.02
8362 9268 2.737376 GTGGAGCGAACCGGTGAC 60.737 66.667 8.52 4.69 37.83 3.67
8374 9280 2.186903 GGTGACGATGGCATCCGT 59.813 61.111 21.20 20.35 42.17 4.69
8375 9281 2.173669 GGTGACGATGGCATCCGTG 61.174 63.158 22.98 12.85 39.30 4.94
8376 9282 1.153647 GTGACGATGGCATCCGTGA 60.154 57.895 22.98 15.43 39.30 4.35
8377 9283 1.141665 TGACGATGGCATCCGTGAG 59.858 57.895 22.98 12.23 39.30 3.51
8389 9295 2.425592 CGTGAGGAGGTGGCACAA 59.574 61.111 20.82 0.00 44.16 3.33
8390 9296 1.669115 CGTGAGGAGGTGGCACAAG 60.669 63.158 20.82 0.00 44.16 3.16
8391 9297 1.302832 GTGAGGAGGTGGCACAAGG 60.303 63.158 20.82 0.00 44.16 3.61
8392 9298 1.461268 TGAGGAGGTGGCACAAGGA 60.461 57.895 20.82 0.00 44.16 3.36
8393 9299 1.059584 TGAGGAGGTGGCACAAGGAA 61.060 55.000 20.82 0.00 44.16 3.36
8394 9300 0.322008 GAGGAGGTGGCACAAGGAAG 60.322 60.000 20.82 0.00 44.16 3.46
8395 9301 1.303643 GGAGGTGGCACAAGGAAGG 60.304 63.158 20.82 0.00 44.16 3.46
8396 9302 1.973812 GAGGTGGCACAAGGAAGGC 60.974 63.158 20.82 0.00 44.16 4.35
8397 9303 2.203480 GGTGGCACAAGGAAGGCA 60.203 61.111 20.82 0.00 44.16 4.75
8398 9304 2.270986 GGTGGCACAAGGAAGGCAG 61.271 63.158 20.82 0.00 44.16 4.85
8399 9305 1.228245 GTGGCACAAGGAAGGCAGA 60.228 57.895 13.86 0.00 44.16 4.26
8400 9306 1.073722 TGGCACAAGGAAGGCAGAG 59.926 57.895 0.00 0.00 35.21 3.35
8401 9307 1.073897 GGCACAAGGAAGGCAGAGT 59.926 57.895 0.00 0.00 0.00 3.24
8402 9308 1.239968 GGCACAAGGAAGGCAGAGTG 61.240 60.000 0.00 0.00 0.00 3.51
8403 9309 1.239968 GCACAAGGAAGGCAGAGTGG 61.240 60.000 0.00 0.00 0.00 4.00
8404 9310 0.109342 CACAAGGAAGGCAGAGTGGT 59.891 55.000 0.00 0.00 0.00 4.16
8405 9311 1.347707 CACAAGGAAGGCAGAGTGGTA 59.652 52.381 0.00 0.00 0.00 3.25
8406 9312 2.026822 CACAAGGAAGGCAGAGTGGTAT 60.027 50.000 0.00 0.00 0.00 2.73
8407 9313 2.644798 ACAAGGAAGGCAGAGTGGTATT 59.355 45.455 0.00 0.00 0.00 1.89
8408 9314 3.274288 CAAGGAAGGCAGAGTGGTATTC 58.726 50.000 0.00 0.00 0.00 1.75
8409 9315 1.482593 AGGAAGGCAGAGTGGTATTCG 59.517 52.381 0.00 0.00 0.00 3.34
8410 9316 1.473434 GGAAGGCAGAGTGGTATTCGG 60.473 57.143 0.00 0.00 0.00 4.30
8411 9317 0.541863 AAGGCAGAGTGGTATTCGGG 59.458 55.000 0.00 0.00 0.00 5.14
8412 9318 0.325296 AGGCAGAGTGGTATTCGGGA 60.325 55.000 0.00 0.00 0.00 5.14
8413 9319 0.105039 GGCAGAGTGGTATTCGGGAG 59.895 60.000 0.00 0.00 0.00 4.30
8414 9320 0.105039 GCAGAGTGGTATTCGGGAGG 59.895 60.000 0.00 0.00 0.00 4.30
8415 9321 1.486211 CAGAGTGGTATTCGGGAGGT 58.514 55.000 0.00 0.00 0.00 3.85
8416 9322 1.831736 CAGAGTGGTATTCGGGAGGTT 59.168 52.381 0.00 0.00 0.00 3.50
8417 9323 2.236395 CAGAGTGGTATTCGGGAGGTTT 59.764 50.000 0.00 0.00 0.00 3.27
8418 9324 2.910977 AGAGTGGTATTCGGGAGGTTTT 59.089 45.455 0.00 0.00 0.00 2.43
8419 9325 3.055312 AGAGTGGTATTCGGGAGGTTTTC 60.055 47.826 0.00 0.00 0.00 2.29
8420 9326 2.910977 AGTGGTATTCGGGAGGTTTTCT 59.089 45.455 0.00 0.00 0.00 2.52
8421 9327 3.329814 AGTGGTATTCGGGAGGTTTTCTT 59.670 43.478 0.00 0.00 0.00 2.52
8422 9328 4.077108 GTGGTATTCGGGAGGTTTTCTTT 58.923 43.478 0.00 0.00 0.00 2.52
8423 9329 4.521639 GTGGTATTCGGGAGGTTTTCTTTT 59.478 41.667 0.00 0.00 0.00 2.27
8424 9330 4.763279 TGGTATTCGGGAGGTTTTCTTTTC 59.237 41.667 0.00 0.00 0.00 2.29
8425 9331 4.157289 GGTATTCGGGAGGTTTTCTTTTCC 59.843 45.833 0.00 0.00 0.00 3.13
8426 9332 3.300239 TTCGGGAGGTTTTCTTTTCCA 57.700 42.857 0.00 0.00 0.00 3.53
8427 9333 3.518992 TCGGGAGGTTTTCTTTTCCAT 57.481 42.857 0.00 0.00 0.00 3.41
8428 9334 4.644163 TCGGGAGGTTTTCTTTTCCATA 57.356 40.909 0.00 0.00 0.00 2.74
8429 9335 4.988029 TCGGGAGGTTTTCTTTTCCATAA 58.012 39.130 0.00 0.00 0.00 1.90
8430 9336 5.386924 TCGGGAGGTTTTCTTTTCCATAAA 58.613 37.500 0.00 0.00 0.00 1.40
8431 9337 5.834204 TCGGGAGGTTTTCTTTTCCATAAAA 59.166 36.000 0.00 0.00 33.58 1.52
8432 9338 6.324254 TCGGGAGGTTTTCTTTTCCATAAAAA 59.676 34.615 0.00 0.00 34.26 1.94
8433 9339 6.422701 CGGGAGGTTTTCTTTTCCATAAAAAC 59.577 38.462 0.00 0.00 39.64 2.43
8434 9340 7.506114 GGGAGGTTTTCTTTTCCATAAAAACT 58.494 34.615 8.82 0.00 41.55 2.66
8436 9342 8.282124 GAGGTTTTCTTTTCCATAAAAACTCG 57.718 34.615 8.54 0.00 43.24 4.18
8437 9343 8.002984 AGGTTTTCTTTTCCATAAAAACTCGA 57.997 30.769 8.82 0.00 35.74 4.04
8438 9344 8.471609 AGGTTTTCTTTTCCATAAAAACTCGAA 58.528 29.630 8.82 0.00 35.74 3.71
8439 9345 9.256477 GGTTTTCTTTTCCATAAAAACTCGAAT 57.744 29.630 8.82 0.00 40.03 3.34
8441 9347 7.867445 TTCTTTTCCATAAAAACTCGAATGC 57.133 32.000 0.00 0.00 34.26 3.56
8442 9348 6.386654 TCTTTTCCATAAAAACTCGAATGCC 58.613 36.000 0.00 0.00 34.26 4.40
8443 9349 5.713792 TTTCCATAAAAACTCGAATGCCA 57.286 34.783 0.00 0.00 0.00 4.92
8444 9350 5.713792 TTCCATAAAAACTCGAATGCCAA 57.286 34.783 0.00 0.00 0.00 4.52
8445 9351 5.713792 TCCATAAAAACTCGAATGCCAAA 57.286 34.783 0.00 0.00 0.00 3.28
8446 9352 6.090483 TCCATAAAAACTCGAATGCCAAAA 57.910 33.333 0.00 0.00 0.00 2.44
8447 9353 6.696411 TCCATAAAAACTCGAATGCCAAAAT 58.304 32.000 0.00 0.00 0.00 1.82
8448 9354 7.158021 TCCATAAAAACTCGAATGCCAAAATT 58.842 30.769 0.00 0.00 0.00 1.82
8449 9355 7.659390 TCCATAAAAACTCGAATGCCAAAATTT 59.341 29.630 0.00 0.00 0.00 1.82
8450 9356 7.956943 CCATAAAAACTCGAATGCCAAAATTTC 59.043 33.333 0.00 0.00 0.00 2.17
8451 9357 8.711457 CATAAAAACTCGAATGCCAAAATTTCT 58.289 29.630 0.00 0.00 0.00 2.52
8452 9358 6.769608 AAAACTCGAATGCCAAAATTTCTC 57.230 33.333 0.00 0.00 0.00 2.87
8453 9359 4.083581 ACTCGAATGCCAAAATTTCTCG 57.916 40.909 0.00 0.00 0.00 4.04
8454 9360 3.751175 ACTCGAATGCCAAAATTTCTCGA 59.249 39.130 0.00 0.00 0.00 4.04
8455 9361 4.215399 ACTCGAATGCCAAAATTTCTCGAA 59.785 37.500 0.00 0.00 0.00 3.71
8456 9362 5.106157 ACTCGAATGCCAAAATTTCTCGAAT 60.106 36.000 0.00 0.00 0.00 3.34
8457 9363 6.093495 ACTCGAATGCCAAAATTTCTCGAATA 59.907 34.615 0.00 0.00 0.00 1.75
8458 9364 6.486248 TCGAATGCCAAAATTTCTCGAATAG 58.514 36.000 0.00 0.00 0.00 1.73
8459 9365 5.172053 CGAATGCCAAAATTTCTCGAATAGC 59.828 40.000 0.00 0.00 0.00 2.97
8460 9366 4.370364 TGCCAAAATTTCTCGAATAGCC 57.630 40.909 0.00 0.00 0.00 3.93
8461 9367 3.761218 TGCCAAAATTTCTCGAATAGCCA 59.239 39.130 0.00 0.00 0.00 4.75
8462 9368 4.402155 TGCCAAAATTTCTCGAATAGCCAT 59.598 37.500 0.00 0.00 0.00 4.40
8463 9369 4.741676 GCCAAAATTTCTCGAATAGCCATG 59.258 41.667 0.00 0.00 0.00 3.66
8464 9370 5.679638 GCCAAAATTTCTCGAATAGCCATGT 60.680 40.000 0.00 0.00 0.00 3.21
8465 9371 5.745294 CCAAAATTTCTCGAATAGCCATGTG 59.255 40.000 0.00 0.00 0.00 3.21
8466 9372 5.505173 AAATTTCTCGAATAGCCATGTGG 57.495 39.130 0.00 0.00 38.53 4.17
8467 9373 2.620251 TTCTCGAATAGCCATGTGGG 57.380 50.000 0.54 0.00 40.85 4.61
8468 9374 0.758734 TCTCGAATAGCCATGTGGGG 59.241 55.000 0.54 0.00 37.04 4.96
8475 9381 2.998097 GCCATGTGGGGTGCTAGA 59.002 61.111 0.54 0.00 37.04 2.43
8476 9382 1.153086 GCCATGTGGGGTGCTAGAG 60.153 63.158 0.54 0.00 37.04 2.43
8477 9383 1.528824 CCATGTGGGGTGCTAGAGG 59.471 63.158 0.00 0.00 0.00 3.69
8478 9384 1.528824 CATGTGGGGTGCTAGAGGG 59.471 63.158 0.00 0.00 0.00 4.30
8479 9385 1.694169 ATGTGGGGTGCTAGAGGGG 60.694 63.158 0.00 0.00 0.00 4.79
8480 9386 3.798511 GTGGGGTGCTAGAGGGGC 61.799 72.222 0.00 0.00 0.00 5.80
8481 9387 4.024984 TGGGGTGCTAGAGGGGCT 62.025 66.667 0.00 0.00 0.00 5.19
8482 9388 2.692741 GGGGTGCTAGAGGGGCTT 60.693 66.667 0.00 0.00 0.00 4.35
8483 9389 2.309504 GGGGTGCTAGAGGGGCTTT 61.310 63.158 0.00 0.00 0.00 3.51
8484 9390 1.691823 GGGTGCTAGAGGGGCTTTT 59.308 57.895 0.00 0.00 0.00 2.27
8485 9391 0.394488 GGGTGCTAGAGGGGCTTTTC 60.394 60.000 0.00 0.00 0.00 2.29
8486 9392 0.621082 GGTGCTAGAGGGGCTTTTCT 59.379 55.000 0.00 0.00 0.00 2.52
8487 9393 1.838077 GGTGCTAGAGGGGCTTTTCTA 59.162 52.381 0.00 0.00 0.00 2.10
8488 9394 2.238898 GGTGCTAGAGGGGCTTTTCTAA 59.761 50.000 0.00 0.00 0.00 2.10
8489 9395 3.308188 GGTGCTAGAGGGGCTTTTCTAAA 60.308 47.826 0.00 0.00 0.00 1.85
8490 9396 4.332828 GTGCTAGAGGGGCTTTTCTAAAA 58.667 43.478 0.00 0.00 0.00 1.52
8491 9397 4.156190 GTGCTAGAGGGGCTTTTCTAAAAC 59.844 45.833 0.00 0.00 0.00 2.43
8492 9398 4.202524 TGCTAGAGGGGCTTTTCTAAAACA 60.203 41.667 0.00 0.00 0.00 2.83
8493 9399 4.765339 GCTAGAGGGGCTTTTCTAAAACAA 59.235 41.667 0.00 0.00 0.00 2.83
8494 9400 5.243060 GCTAGAGGGGCTTTTCTAAAACAAA 59.757 40.000 0.00 0.00 0.00 2.83
8495 9401 5.791336 AGAGGGGCTTTTCTAAAACAAAG 57.209 39.130 0.00 0.00 33.77 2.77
8496 9402 4.588951 AGAGGGGCTTTTCTAAAACAAAGG 59.411 41.667 0.00 0.00 31.65 3.11
8497 9403 4.552674 AGGGGCTTTTCTAAAACAAAGGA 58.447 39.130 0.00 0.00 31.65 3.36
8498 9404 4.344102 AGGGGCTTTTCTAAAACAAAGGAC 59.656 41.667 0.00 0.00 31.65 3.85
8499 9405 4.502604 GGGGCTTTTCTAAAACAAAGGACC 60.503 45.833 0.00 0.00 37.29 4.46
8500 9406 4.100344 GGGCTTTTCTAAAACAAAGGACCA 59.900 41.667 0.00 0.00 37.82 4.02
8501 9407 5.395879 GGGCTTTTCTAAAACAAAGGACCAA 60.396 40.000 0.00 0.00 37.82 3.67
8502 9408 6.288294 GGCTTTTCTAAAACAAAGGACCAAT 58.712 36.000 0.00 0.00 31.65 3.16
8503 9409 6.202762 GGCTTTTCTAAAACAAAGGACCAATG 59.797 38.462 0.00 0.00 31.65 2.82
8504 9410 6.292865 GCTTTTCTAAAACAAAGGACCAATGC 60.293 38.462 0.00 0.00 31.65 3.56
8505 9411 6.478512 TTTCTAAAACAAAGGACCAATGCT 57.521 33.333 0.00 0.00 0.00 3.79
8506 9412 6.478512 TTCTAAAACAAAGGACCAATGCTT 57.521 33.333 0.00 0.00 38.30 3.91
8507 9413 5.841810 TCTAAAACAAAGGACCAATGCTTG 58.158 37.500 0.00 0.00 36.47 4.01
8508 9414 4.486125 AAAACAAAGGACCAATGCTTGT 57.514 36.364 0.00 0.00 36.47 3.16
8509 9415 4.486125 AAACAAAGGACCAATGCTTGTT 57.514 36.364 0.00 0.00 36.47 2.83
8510 9416 3.733443 ACAAAGGACCAATGCTTGTTC 57.267 42.857 0.00 0.00 36.47 3.18
8511 9417 2.365293 ACAAAGGACCAATGCTTGTTCC 59.635 45.455 0.00 4.90 42.08 3.62
8515 9421 3.303881 GGACCAATGCTTGTTCCTTTC 57.696 47.619 5.59 0.00 39.00 2.62
8516 9422 2.627699 GGACCAATGCTTGTTCCTTTCA 59.372 45.455 5.59 0.00 39.00 2.69
8517 9423 3.259123 GGACCAATGCTTGTTCCTTTCAT 59.741 43.478 5.59 0.00 39.00 2.57
8518 9424 4.462483 GGACCAATGCTTGTTCCTTTCATA 59.538 41.667 5.59 0.00 39.00 2.15
8519 9425 5.393461 GGACCAATGCTTGTTCCTTTCATAG 60.393 44.000 5.59 0.00 39.00 2.23
8520 9426 5.079643 ACCAATGCTTGTTCCTTTCATAGT 58.920 37.500 0.00 0.00 0.00 2.12
8521 9427 5.047802 ACCAATGCTTGTTCCTTTCATAGTG 60.048 40.000 0.00 0.00 0.00 2.74
8522 9428 5.404946 CAATGCTTGTTCCTTTCATAGTGG 58.595 41.667 0.00 0.00 0.00 4.00
8523 9429 4.098914 TGCTTGTTCCTTTCATAGTGGT 57.901 40.909 0.00 0.00 0.00 4.16
8524 9430 5.235850 TGCTTGTTCCTTTCATAGTGGTA 57.764 39.130 0.00 0.00 0.00 3.25
8525 9431 5.815581 TGCTTGTTCCTTTCATAGTGGTAT 58.184 37.500 0.00 0.00 0.00 2.73
8526 9432 6.245408 TGCTTGTTCCTTTCATAGTGGTATT 58.755 36.000 0.00 0.00 0.00 1.89
8527 9433 6.374333 TGCTTGTTCCTTTCATAGTGGTATTC 59.626 38.462 0.00 0.00 0.00 1.75
8528 9434 6.456988 GCTTGTTCCTTTCATAGTGGTATTCG 60.457 42.308 0.00 0.00 0.00 3.34
8529 9435 4.873827 TGTTCCTTTCATAGTGGTATTCGC 59.126 41.667 0.00 0.00 0.00 4.70
8530 9436 4.746535 TCCTTTCATAGTGGTATTCGCA 57.253 40.909 0.00 0.00 0.00 5.10
8531 9437 5.092554 TCCTTTCATAGTGGTATTCGCAA 57.907 39.130 0.00 0.00 0.00 4.85
8532 9438 5.116180 TCCTTTCATAGTGGTATTCGCAAG 58.884 41.667 0.00 0.00 0.00 4.01
8594 9544 4.846779 TTTGCTTGCGAAATAAGAGGTT 57.153 36.364 0.00 0.00 0.00 3.50
8597 9547 6.509418 TTGCTTGCGAAATAAGAGGTTTAT 57.491 33.333 0.00 0.00 0.00 1.40
8598 9548 6.509418 TGCTTGCGAAATAAGAGGTTTATT 57.491 33.333 0.00 0.00 0.00 1.40
8599 9549 6.321717 TGCTTGCGAAATAAGAGGTTTATTG 58.678 36.000 0.00 0.00 0.00 1.90
8600 9550 6.072175 TGCTTGCGAAATAAGAGGTTTATTGT 60.072 34.615 0.00 0.00 0.00 2.71
8601 9551 6.251376 GCTTGCGAAATAAGAGGTTTATTGTG 59.749 38.462 0.00 0.00 0.00 3.33
8602 9552 6.189677 TGCGAAATAAGAGGTTTATTGTGG 57.810 37.500 0.00 0.00 0.00 4.17
8603 9553 5.708230 TGCGAAATAAGAGGTTTATTGTGGT 59.292 36.000 0.00 0.00 0.00 4.16
8604 9554 6.027749 GCGAAATAAGAGGTTTATTGTGGTG 58.972 40.000 0.00 0.00 0.00 4.17
8606 9556 7.415206 GCGAAATAAGAGGTTTATTGTGGTGAT 60.415 37.037 0.00 0.00 0.00 3.06
8607 9557 8.458843 CGAAATAAGAGGTTTATTGTGGTGATT 58.541 33.333 0.00 0.00 0.00 2.57
8608 9558 9.573133 GAAATAAGAGGTTTATTGTGGTGATTG 57.427 33.333 0.00 0.00 0.00 2.67
8609 9559 5.391312 AAGAGGTTTATTGTGGTGATTGC 57.609 39.130 0.00 0.00 0.00 3.56
8611 9561 2.094752 AGGTTTATTGTGGTGATTGCGC 60.095 45.455 0.00 0.00 0.00 6.09
8612 9562 2.094752 GGTTTATTGTGGTGATTGCGCT 60.095 45.455 9.73 0.00 0.00 5.92
8613 9563 3.574614 GTTTATTGTGGTGATTGCGCTT 58.425 40.909 9.73 0.00 0.00 4.68
8614 9564 3.932545 TTATTGTGGTGATTGCGCTTT 57.067 38.095 9.73 0.00 0.00 3.51
8615 9565 5.157781 GTTTATTGTGGTGATTGCGCTTTA 58.842 37.500 9.73 0.00 0.00 1.85
8616 9566 3.932545 ATTGTGGTGATTGCGCTTTAA 57.067 38.095 9.73 0.00 0.00 1.52
8617 9567 3.932545 TTGTGGTGATTGCGCTTTAAT 57.067 38.095 9.73 0.00 0.00 1.40
8619 9569 3.573598 TGTGGTGATTGCGCTTTAATTG 58.426 40.909 9.73 0.00 0.00 2.32
8622 9572 2.165437 GGTGATTGCGCTTTAATTGGGA 59.835 45.455 9.73 0.00 0.00 4.37
8623 9573 3.367910 GGTGATTGCGCTTTAATTGGGAA 60.368 43.478 9.73 0.00 0.00 3.97
8624 9574 4.241681 GTGATTGCGCTTTAATTGGGAAA 58.758 39.130 9.73 0.00 0.00 3.13
8625 9575 4.869861 GTGATTGCGCTTTAATTGGGAAAT 59.130 37.500 9.73 0.00 0.00 2.17
8628 9578 3.843999 TGCGCTTTAATTGGGAAATGTC 58.156 40.909 9.73 0.00 0.00 3.06
8629 9579 3.186909 GCGCTTTAATTGGGAAATGTCC 58.813 45.455 0.00 0.00 44.10 4.02
8631 9581 4.423732 CGCTTTAATTGGGAAATGTCCTG 58.576 43.478 0.82 0.00 44.28 3.86
8632 9582 4.082245 CGCTTTAATTGGGAAATGTCCTGT 60.082 41.667 0.82 0.00 44.28 4.00
8633 9583 5.410924 GCTTTAATTGGGAAATGTCCTGTC 58.589 41.667 0.82 0.00 44.28 3.51
8634 9584 5.185828 GCTTTAATTGGGAAATGTCCTGTCT 59.814 40.000 0.82 0.00 44.28 3.41
8635 9585 6.377146 GCTTTAATTGGGAAATGTCCTGTCTA 59.623 38.462 0.82 0.00 44.28 2.59
8637 9587 8.519799 TTTAATTGGGAAATGTCCTGTCTATC 57.480 34.615 0.82 0.00 44.28 2.08
8638 9588 5.715439 ATTGGGAAATGTCCTGTCTATCA 57.285 39.130 0.82 0.00 44.28 2.15
8639 9589 5.512942 TTGGGAAATGTCCTGTCTATCAA 57.487 39.130 0.82 0.00 44.28 2.57
8640 9590 5.512942 TGGGAAATGTCCTGTCTATCAAA 57.487 39.130 0.82 0.00 44.28 2.69
8641 9591 6.078456 TGGGAAATGTCCTGTCTATCAAAT 57.922 37.500 0.82 0.00 44.28 2.32
8642 9592 7.206789 TGGGAAATGTCCTGTCTATCAAATA 57.793 36.000 0.82 0.00 44.28 1.40
8643 9593 7.282585 TGGGAAATGTCCTGTCTATCAAATAG 58.717 38.462 0.82 0.00 44.28 1.73
8645 9595 8.429641 GGGAAATGTCCTGTCTATCAAATAGTA 58.570 37.037 0.82 0.00 44.28 1.82
8646 9596 9.482627 GGAAATGTCCTGTCTATCAAATAGTAG 57.517 37.037 0.00 0.00 41.24 2.57
8651 9601 9.696572 TGTCCTGTCTATCAAATAGTAGTTACT 57.303 33.333 0.00 0.00 40.24 2.24
8678 9628 9.730420 ATGTACCACTCAAATAATATTTTTCGC 57.270 29.630 0.00 0.00 0.00 4.70
8679 9629 8.731605 TGTACCACTCAAATAATATTTTTCGCA 58.268 29.630 0.00 0.00 0.00 5.10
8680 9630 9.221775 GTACCACTCAAATAATATTTTTCGCAG 57.778 33.333 0.00 0.00 0.00 5.18
8681 9631 8.050778 ACCACTCAAATAATATTTTTCGCAGA 57.949 30.769 0.00 0.00 0.00 4.26
8682 9632 8.686334 ACCACTCAAATAATATTTTTCGCAGAT 58.314 29.630 0.00 0.00 35.04 2.90
8683 9633 9.520204 CCACTCAAATAATATTTTTCGCAGATT 57.480 29.630 0.00 0.00 35.04 2.40
8710 9660 2.380064 AAAAAGACCCAGCACCATCA 57.620 45.000 0.00 0.00 0.00 3.07
8711 9661 2.380064 AAAAGACCCAGCACCATCAA 57.620 45.000 0.00 0.00 0.00 2.57
8712 9662 2.380064 AAAGACCCAGCACCATCAAA 57.620 45.000 0.00 0.00 0.00 2.69
8713 9663 2.610438 AAGACCCAGCACCATCAAAT 57.390 45.000 0.00 0.00 0.00 2.32
8715 9665 1.106285 GACCCAGCACCATCAAATCC 58.894 55.000 0.00 0.00 0.00 3.01
8719 9669 2.624838 CCCAGCACCATCAAATCCATAC 59.375 50.000 0.00 0.00 0.00 2.39
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 9.836864 ATGATTCTTAAAGACACATAGTATGCA 57.163 29.630 10.16 0.00 0.00 3.96
43 44 5.233050 GTGATCAAACGACGATGATGAAGAT 59.767 40.000 20.07 5.28 36.45 2.40
44 45 4.562789 GTGATCAAACGACGATGATGAAGA 59.437 41.667 20.07 4.69 36.45 2.87
45 46 4.259970 GGTGATCAAACGACGATGATGAAG 60.260 45.833 20.07 0.00 36.45 3.02
46 47 3.616821 GGTGATCAAACGACGATGATGAA 59.383 43.478 20.07 9.55 36.45 2.57
67 68 3.198068 AGTTCATGGATTCGTCGAATGG 58.802 45.455 24.50 11.21 31.89 3.16
71 72 1.202256 CCGAGTTCATGGATTCGTCGA 60.202 52.381 16.71 0.00 0.00 4.20
100 101 1.933853 GGTGAATTCGGACGAGGATTG 59.066 52.381 0.04 0.00 0.00 2.67
226 227 0.251341 ACCCACAATCCAGTTGCCTC 60.251 55.000 0.00 0.00 41.69 4.70
239 240 4.612412 GCCGTCGTTCCACCCACA 62.612 66.667 0.00 0.00 0.00 4.17
294 296 0.593128 CCAAGGCCTTGTCGAACTTG 59.407 55.000 37.09 19.65 38.85 3.16
299 301 1.896660 GTTGCCAAGGCCTTGTCGA 60.897 57.895 37.09 26.37 41.09 4.20
323 325 3.249080 CCGACATCGTTGTTTTACCACTT 59.751 43.478 0.00 0.00 35.79 3.16
376 378 0.991920 TCTTTCACTCCATCCACCCC 59.008 55.000 0.00 0.00 0.00 4.95
443 445 3.610619 CTGGACGCCTGCCATGTCA 62.611 63.158 0.00 0.00 34.33 3.58
452 454 4.057428 GCGACAGTCTGGACGCCT 62.057 66.667 25.41 0.00 39.72 5.52
454 456 1.954146 TTTGCGACAGTCTGGACGC 60.954 57.895 27.49 27.49 43.35 5.19
525 528 2.232941 ACGACGGTCACCATAATTGTCT 59.767 45.455 9.10 0.00 0.00 3.41
559 562 1.418264 TCTCCCAAATTGTCCGACACA 59.582 47.619 0.00 0.00 0.00 3.72
679 724 1.887198 TCAACCAACCTCTCTCTCGTC 59.113 52.381 0.00 0.00 0.00 4.20
681 726 2.159170 GGATCAACCAACCTCTCTCTCG 60.159 54.545 0.00 0.00 38.79 4.04
689 734 2.355115 GCCCGGATCAACCAACCT 59.645 61.111 0.73 0.00 38.90 3.50
690 735 2.034999 TGCCCGGATCAACCAACC 59.965 61.111 0.73 0.00 38.90 3.77
691 736 2.046285 CCTGCCCGGATCAACCAAC 61.046 63.158 0.73 0.00 38.90 3.77
693 738 2.609299 TCCTGCCCGGATCAACCA 60.609 61.111 0.73 0.00 36.69 3.67
695 740 2.514824 GCTCCTGCCCGGATCAAC 60.515 66.667 0.73 0.00 42.12 3.18
697 742 3.473647 CAGCTCCTGCCCGGATCA 61.474 66.667 0.73 0.00 42.12 2.92
741 786 4.142447 CCTGTGCATCATTCTTCTGAAAGG 60.142 45.833 0.00 0.00 35.63 3.11
745 790 2.362736 GCCTGTGCATCATTCTTCTGA 58.637 47.619 0.00 0.00 37.47 3.27
836 886 1.204146 GGGCTGGTCCTTCTGTGATA 58.796 55.000 0.00 0.00 34.39 2.15
938 991 2.060383 CGGGCATGACCAGAGGAGA 61.060 63.158 20.22 0.00 42.05 3.71
939 992 2.503061 CGGGCATGACCAGAGGAG 59.497 66.667 20.22 0.00 42.05 3.69
940 993 3.785859 GCGGGCATGACCAGAGGA 61.786 66.667 20.22 0.00 42.05 3.71
980 1033 0.537371 GCTACTGTTGGCTGGTTGGT 60.537 55.000 0.00 0.00 0.00 3.67
1235 1294 3.324117 AGCAGCATAGATAAGATGTGCG 58.676 45.455 0.00 0.00 40.54 5.34
1277 1341 3.585862 CGAATGAGACGAAGAAAAGGGA 58.414 45.455 0.00 0.00 0.00 4.20
1505 1569 5.656859 GCTTATGAAATTAAGAACTGGGGGT 59.343 40.000 0.00 0.00 32.02 4.95
1527 1593 4.392047 TCATCAACATTTCTGTGACTGCT 58.608 39.130 0.00 0.00 35.22 4.24
1674 1740 1.335810 CCATTGGATTGCATGGACTCG 59.664 52.381 0.00 0.00 42.49 4.18
1678 1744 1.483004 CTTGCCATTGGATTGCATGGA 59.517 47.619 6.95 0.00 42.49 3.41
1679 1745 1.483004 TCTTGCCATTGGATTGCATGG 59.517 47.619 6.95 0.00 42.73 3.66
1680 1746 2.971660 TCTTGCCATTGGATTGCATG 57.028 45.000 6.95 0.00 34.51 4.06
1681 1747 2.035449 CGATCTTGCCATTGGATTGCAT 59.965 45.455 6.95 0.00 34.51 3.96
1682 1748 1.406180 CGATCTTGCCATTGGATTGCA 59.594 47.619 6.95 0.00 0.00 4.08
1683 1749 1.866880 GCGATCTTGCCATTGGATTGC 60.867 52.381 6.95 2.75 38.94 3.56
1684 1750 1.406180 TGCGATCTTGCCATTGGATTG 59.594 47.619 6.95 0.00 0.00 2.67
1685 1751 1.406539 GTGCGATCTTGCCATTGGATT 59.593 47.619 6.95 0.00 0.00 3.01
1686 1752 1.027357 GTGCGATCTTGCCATTGGAT 58.973 50.000 6.95 0.00 0.00 3.41
1702 1777 4.340894 TTGCAATAAGAGAACGATGTGC 57.659 40.909 0.00 0.00 0.00 4.57
1732 1807 6.128849 GCAAACACATACACACCATTCAAATC 60.129 38.462 0.00 0.00 0.00 2.17
1765 1840 2.031157 GGATCACCACCTGTTTGTTTCG 60.031 50.000 0.00 0.00 35.97 3.46
1855 1930 3.074412 CTGACTTGCCACCGTCTTTATT 58.926 45.455 0.00 0.00 0.00 1.40
1873 1948 3.006323 GCTTTCTCAGAACCACTCTCTGA 59.994 47.826 2.78 2.78 45.50 3.27
1878 1953 3.324993 CTCAGCTTTCTCAGAACCACTC 58.675 50.000 0.00 0.00 0.00 3.51
2092 2168 7.945033 TTGTAAATCATGCCTTTGTTTCTTC 57.055 32.000 0.00 0.00 0.00 2.87
2119 2195 9.125026 GAAAATATAAGAAATGGCTCAGAAGGA 57.875 33.333 0.00 0.00 0.00 3.36
2142 2218 6.074516 GCTCGCGTACAGACATATAAATGAAA 60.075 38.462 5.77 0.00 36.54 2.69
2169 2245 8.999905 TTCATCCAATATTTCCATGAATCAGA 57.000 30.769 0.00 0.00 30.30 3.27
2368 2444 2.800250 AGGACAGAAGGGAATTGCAAG 58.200 47.619 4.94 0.00 0.00 4.01
2414 2490 6.126409 CCCAGAAATAACTATAACCTGGCAA 58.874 40.000 0.00 0.00 38.60 4.52
2893 2970 6.553100 TCATGAGTTAAATGGGGAACAAAACT 59.447 34.615 0.00 0.00 34.97 2.66
2966 3043 5.475719 CGTGACAATAGGTCCTTTAGAACA 58.524 41.667 0.00 0.00 46.38 3.18
3032 3109 2.325583 AACTTGAGAACAGTTCCGCA 57.674 45.000 9.85 6.05 0.00 5.69
3056 3133 1.300233 GATAGTTGGCGCTCCTCCG 60.300 63.158 7.64 0.00 0.00 4.63
3200 3277 3.091545 TGTGAATCCCTGAATTCAAGGC 58.908 45.455 17.04 5.42 44.83 4.35
3203 3280 4.706476 GGATGTGTGAATCCCTGAATTCAA 59.294 41.667 9.88 0.00 44.83 2.69
3447 3524 5.914201 TGAAGGGCATCCTGCATAGTACAA 61.914 45.833 1.09 0.00 43.78 2.41
3534 3611 7.453393 CCTCTATGAGATTAAACCCTATGCAA 58.547 38.462 0.00 0.00 0.00 4.08
3652 3729 2.930168 GCAACGGATGCGCTTTTAG 58.070 52.632 9.73 0.42 46.87 1.85
3675 3752 3.617263 GCAGTAACACTCTATTTGGGTCG 59.383 47.826 0.00 0.00 0.00 4.79
3723 3800 4.686191 AGGATCAATTACCTGCTCAGAG 57.314 45.455 0.00 0.00 34.99 3.35
3786 3863 5.164620 TCTCAGATCCAGCAACACAATTA 57.835 39.130 0.00 0.00 0.00 1.40
3795 3872 3.609256 AGAGGTATCTCAGATCCAGCA 57.391 47.619 5.64 0.00 42.34 4.41
4029 4106 7.041372 ACGATGTCATTTATGGTAATACTTGCC 60.041 37.037 0.00 0.00 35.79 4.52
4053 4130 2.482336 TCCACAATCCATGACGAAAACG 59.518 45.455 0.00 0.00 0.00 3.60
4122 4199 2.442236 TTGAAATCCATGAGGGGAGC 57.558 50.000 0.00 0.00 41.08 4.70
4254 4331 2.019984 GCTATGGAAAGAAGCTGGTGG 58.980 52.381 0.00 0.00 33.40 4.61
4281 4366 9.725019 CATATAACATACAGAAGGGAAGCATTA 57.275 33.333 0.00 0.00 0.00 1.90
4346 4431 7.442969 AGAGACGGTCAAACATAATAACACAAA 59.557 33.333 11.27 0.00 0.00 2.83
4398 4483 5.602561 AGAAACCCCATATTAAGGCAAATCC 59.397 40.000 0.00 0.00 0.00 3.01
4446 4579 9.432982 TGATATAAACCAATGGGCTAAATTTCT 57.567 29.630 3.55 0.00 37.90 2.52
4555 4690 3.772572 TCATGAGAGGAACGGGAACATTA 59.227 43.478 0.00 0.00 0.00 1.90
4599 4734 3.751175 TGACCACCGAAGCAGAATAAAAG 59.249 43.478 0.00 0.00 0.00 2.27
4600 4735 3.745799 TGACCACCGAAGCAGAATAAAA 58.254 40.909 0.00 0.00 0.00 1.52
4714 4849 1.488393 TGTGATCATATCGCCCAACCA 59.512 47.619 0.00 0.00 38.99 3.67
4715 4850 1.873591 GTGTGATCATATCGCCCAACC 59.126 52.381 0.00 0.00 38.99 3.77
4716 4851 2.802816 GAGTGTGATCATATCGCCCAAC 59.197 50.000 0.00 0.00 38.99 3.77
5056 5192 2.291741 ACGCAAAGGCAAAGAGAGAAAG 59.708 45.455 0.00 0.00 41.24 2.62
5132 5268 4.748798 AGGCTCCCCTGGACCCTG 62.749 72.222 0.00 0.00 36.51 4.45
5133 5269 3.960313 AAGGCTCCCCTGGACCCT 61.960 66.667 0.00 0.00 41.90 4.34
5134 5270 3.732849 CAAGGCTCCCCTGGACCC 61.733 72.222 0.00 0.00 41.90 4.46
5135 5271 3.732849 CCAAGGCTCCCCTGGACC 61.733 72.222 0.00 0.00 41.90 4.46
5136 5272 4.432741 GCCAAGGCTCCCCTGGAC 62.433 72.222 7.14 0.00 41.90 4.02
5200 5336 2.912956 TGTAAGAGGCTGTTTCCAGGAT 59.087 45.455 0.90 0.00 39.22 3.24
5325 5968 4.627058 CCCAACAAATGTCAAAAGTACCC 58.373 43.478 0.00 0.00 0.00 3.69
5329 5972 3.706086 AGAGCCCAACAAATGTCAAAAGT 59.294 39.130 0.00 0.00 0.00 2.66
5330 5973 4.326504 AGAGCCCAACAAATGTCAAAAG 57.673 40.909 0.00 0.00 0.00 2.27
5331 5974 4.751767 AAGAGCCCAACAAATGTCAAAA 57.248 36.364 0.00 0.00 0.00 2.44
5332 5975 4.646945 TGTAAGAGCCCAACAAATGTCAAA 59.353 37.500 0.00 0.00 0.00 2.69
5333 5976 4.037446 GTGTAAGAGCCCAACAAATGTCAA 59.963 41.667 0.00 0.00 0.00 3.18
5334 5977 3.568007 GTGTAAGAGCCCAACAAATGTCA 59.432 43.478 0.00 0.00 0.00 3.58
5335 5978 3.364964 CGTGTAAGAGCCCAACAAATGTC 60.365 47.826 0.00 0.00 0.00 3.06
5617 6384 1.358152 TCCCCAACTTCGGATCAACT 58.642 50.000 0.00 0.00 0.00 3.16
5903 6677 1.200020 GCTTGGGAATGAACGGAACAG 59.800 52.381 0.00 0.00 0.00 3.16
5960 6734 8.081633 TGCCAACTAATAAAAATGACAGAACTG 58.918 33.333 0.00 0.00 0.00 3.16
5965 6739 7.156876 TCCTGCCAACTAATAAAAATGACAG 57.843 36.000 0.00 0.00 0.00 3.51
6043 6817 3.181461 CCTTCCATCCTTCATAAGCTCGT 60.181 47.826 0.00 0.00 0.00 4.18
6407 7181 2.228822 AGCATAAACAAGAACTTGGCCG 59.771 45.455 17.05 4.21 44.45 6.13
6469 7243 5.923733 AAAATGATGTATTAAACGGGGCA 57.076 34.783 0.00 0.00 0.00 5.36
6470 7244 6.334202 TGAAAAATGATGTATTAAACGGGGC 58.666 36.000 0.00 0.00 0.00 5.80
6540 7320 3.130516 TCTGGTACTTAGCATTCACGGAG 59.869 47.826 0.00 0.00 32.73 4.63
6543 7323 3.187700 GGTCTGGTACTTAGCATTCACG 58.812 50.000 0.00 0.00 32.73 4.35
6743 7523 3.472283 AGAAGGCATAGATCAGTGCAG 57.528 47.619 19.73 0.00 43.00 4.41
6773 7553 4.401022 CATCTTCAAATGCCCAGCCTATA 58.599 43.478 0.00 0.00 0.00 1.31
6861 7641 8.603242 TCTTCTGTACAAGTTTATCAAGTTCC 57.397 34.615 0.00 0.00 0.00 3.62
6979 7759 8.604184 TGGTACCTAAAGTATCACCAATGTTTA 58.396 33.333 14.36 0.00 37.14 2.01
6986 7766 8.604184 TGTAATTTGGTACCTAAAGTATCACCA 58.396 33.333 14.36 7.17 41.89 4.17
6999 7779 4.338400 GGCAGAGGATTGTAATTTGGTACC 59.662 45.833 4.43 4.43 0.00 3.34
7028 7808 5.148651 TCACTTTCCCTTGTTAGCTACTC 57.851 43.478 0.00 0.00 0.00 2.59
7134 7915 8.082242 AGTAAATTGGATACTCAACAACTTTGC 58.918 33.333 0.00 0.00 37.61 3.68
7187 7968 7.855904 GCCACATTACAAGCACAATTAGTATAC 59.144 37.037 0.00 0.00 0.00 1.47
7269 8050 6.532657 GCTCTTGTGCAGCAAATAAAATGTAT 59.467 34.615 0.00 0.00 36.53 2.29
7302 8083 0.539986 TTCCTTCACATAGGTCGCCC 59.460 55.000 0.00 0.00 36.63 6.13
7584 8365 2.582052 GTTTGTGTCAACCATCCCAGA 58.418 47.619 0.00 0.00 0.00 3.86
7723 8504 4.425577 GTTGATGAACCTAACCTTGCAG 57.574 45.455 0.00 0.00 0.00 4.41
7742 8523 2.775384 TGTCAGTTAACTGTCAGGGGTT 59.225 45.455 29.83 0.00 44.12 4.11
7801 8582 4.205065 AGCTCTGTGGAGAATCTTTCTG 57.795 45.455 0.00 0.00 40.87 3.02
7913 8733 2.124320 AATTCGCCCCCGGTGATG 60.124 61.111 0.00 0.00 42.13 3.07
7918 8738 1.248101 AAGTTTCAATTCGCCCCCGG 61.248 55.000 0.00 0.00 34.56 5.73
7920 8740 3.445805 TGATAAAGTTTCAATTCGCCCCC 59.554 43.478 0.00 0.00 0.00 5.40
7998 8825 4.623932 ACAAATCTCAGCTTCAGTGGTA 57.376 40.909 0.00 0.00 0.00 3.25
8021 8924 2.140224 TCCTTTCCTCCCCTGAACAAA 58.860 47.619 0.00 0.00 0.00 2.83
8076 8979 1.145571 TACCCAAGACAGGTTGCCTT 58.854 50.000 0.00 0.00 38.89 4.35
8082 8985 0.912486 GCCTCATACCCAAGACAGGT 59.088 55.000 0.00 0.00 41.64 4.00
8083 8986 0.179073 CGCCTCATACCCAAGACAGG 60.179 60.000 0.00 0.00 0.00 4.00
8084 8987 0.179073 CCGCCTCATACCCAAGACAG 60.179 60.000 0.00 0.00 0.00 3.51
8085 8988 0.907704 ACCGCCTCATACCCAAGACA 60.908 55.000 0.00 0.00 0.00 3.41
8087 8990 0.616395 TCACCGCCTCATACCCAAGA 60.616 55.000 0.00 0.00 0.00 3.02
8133 9039 8.457261 CAACCCATGTTTTTCTTCAATGAAAAA 58.543 29.630 10.02 10.02 46.87 1.94
8134 9040 7.826252 TCAACCCATGTTTTTCTTCAATGAAAA 59.174 29.630 0.00 0.00 42.12 2.29
8135 9041 7.334090 TCAACCCATGTTTTTCTTCAATGAAA 58.666 30.769 0.00 0.00 34.55 2.69
8136 9042 6.882656 TCAACCCATGTTTTTCTTCAATGAA 58.117 32.000 0.00 0.00 30.42 2.57
8137 9043 6.098124 ACTCAACCCATGTTTTTCTTCAATGA 59.902 34.615 0.00 0.00 30.42 2.57
8138 9044 6.282930 ACTCAACCCATGTTTTTCTTCAATG 58.717 36.000 0.00 0.00 30.42 2.82
8139 9045 6.484364 ACTCAACCCATGTTTTTCTTCAAT 57.516 33.333 0.00 0.00 30.42 2.57
8140 9046 5.930837 ACTCAACCCATGTTTTTCTTCAA 57.069 34.783 0.00 0.00 30.42 2.69
8141 9047 7.595819 AATACTCAACCCATGTTTTTCTTCA 57.404 32.000 0.00 0.00 30.42 3.02
8143 9049 8.143835 CAGAAATACTCAACCCATGTTTTTCTT 58.856 33.333 0.00 0.00 38.73 2.52
8150 9056 4.589908 GGACAGAAATACTCAACCCATGT 58.410 43.478 0.00 0.00 0.00 3.21
8218 9124 1.150536 TCTGCAGACCCAAACCACC 59.849 57.895 13.74 0.00 0.00 4.61
8219 9125 2.331265 GTCTGCAGACCCAAACCAC 58.669 57.895 32.55 8.09 39.07 4.16
8234 9140 1.203441 TGCCCTCATCAGCAAGGTCT 61.203 55.000 0.00 0.00 35.69 3.85
8235 9141 0.747283 CTGCCCTCATCAGCAAGGTC 60.747 60.000 0.00 0.00 38.82 3.85
8236 9142 1.302285 CTGCCCTCATCAGCAAGGT 59.698 57.895 0.00 0.00 38.82 3.50
8237 9143 1.453379 CCTGCCCTCATCAGCAAGG 60.453 63.158 0.00 0.00 38.82 3.61
8238 9144 2.119655 GCCTGCCCTCATCAGCAAG 61.120 63.158 0.00 0.00 38.82 4.01
8239 9145 2.044650 GCCTGCCCTCATCAGCAA 60.045 61.111 0.00 0.00 38.82 3.91
8240 9146 4.119363 GGCCTGCCCTCATCAGCA 62.119 66.667 0.00 0.00 37.46 4.41
8241 9147 4.119363 TGGCCTGCCCTCATCAGC 62.119 66.667 3.32 0.00 34.56 4.26
8242 9148 2.124403 GTGGCCTGCCCTCATCAG 60.124 66.667 3.32 0.00 34.56 2.90
8243 9149 2.934932 TGTGGCCTGCCCTCATCA 60.935 61.111 3.32 0.00 32.37 3.07
8244 9150 2.439156 GTGTGGCCTGCCCTCATC 60.439 66.667 3.32 0.00 39.16 2.92
8245 9151 4.415150 CGTGTGGCCTGCCCTCAT 62.415 66.667 3.32 0.00 39.16 2.90
8255 9161 2.594592 AGTTTGGAGGCGTGTGGC 60.595 61.111 0.00 0.00 42.51 5.01
8256 9162 2.260869 CCAGTTTGGAGGCGTGTGG 61.261 63.158 0.00 0.00 40.96 4.17
8257 9163 1.525995 ACCAGTTTGGAGGCGTGTG 60.526 57.895 1.40 0.00 40.96 3.82
8258 9164 1.525995 CACCAGTTTGGAGGCGTGT 60.526 57.895 1.40 0.00 40.96 4.49
8259 9165 2.260869 CCACCAGTTTGGAGGCGTG 61.261 63.158 1.40 0.00 41.28 5.34
8260 9166 2.113139 CCACCAGTTTGGAGGCGT 59.887 61.111 1.40 0.00 41.28 5.68
8264 9170 0.890996 GGAGCACCACCAGTTTGGAG 60.891 60.000 1.40 0.00 41.78 3.86
8265 9171 1.150536 GGAGCACCACCAGTTTGGA 59.849 57.895 1.40 0.00 41.78 3.53
8266 9172 0.468029 AAGGAGCACCACCAGTTTGG 60.468 55.000 2.07 0.00 45.02 3.28
8267 9173 1.338020 GAAAGGAGCACCACCAGTTTG 59.662 52.381 2.07 0.00 38.94 2.93
8268 9174 1.692411 GAAAGGAGCACCACCAGTTT 58.308 50.000 2.07 0.00 38.94 2.66
8269 9175 0.178990 GGAAAGGAGCACCACCAGTT 60.179 55.000 2.07 0.00 38.94 3.16
8270 9176 1.062488 AGGAAAGGAGCACCACCAGT 61.062 55.000 2.07 0.00 38.94 4.00
8271 9177 0.322008 GAGGAAAGGAGCACCACCAG 60.322 60.000 2.07 0.00 38.94 4.00
8272 9178 0.768221 AGAGGAAAGGAGCACCACCA 60.768 55.000 2.07 0.00 38.94 4.17
8273 9179 0.035915 GAGAGGAAAGGAGCACCACC 60.036 60.000 2.07 3.05 38.94 4.61
8274 9180 0.687354 TGAGAGGAAAGGAGCACCAC 59.313 55.000 2.07 0.00 38.94 4.16
8275 9181 1.434188 TTGAGAGGAAAGGAGCACCA 58.566 50.000 2.07 0.00 38.94 4.17
8276 9182 2.568623 TTTGAGAGGAAAGGAGCACC 57.431 50.000 0.00 0.00 0.00 5.01
8277 9183 3.013219 GGATTTGAGAGGAAAGGAGCAC 58.987 50.000 0.00 0.00 0.00 4.40
8278 9184 2.644299 TGGATTTGAGAGGAAAGGAGCA 59.356 45.455 0.00 0.00 0.00 4.26
8279 9185 3.356529 TGGATTTGAGAGGAAAGGAGC 57.643 47.619 0.00 0.00 0.00 4.70
8280 9186 5.104360 TGGTATGGATTTGAGAGGAAAGGAG 60.104 44.000 0.00 0.00 0.00 3.69
8281 9187 4.788075 TGGTATGGATTTGAGAGGAAAGGA 59.212 41.667 0.00 0.00 0.00 3.36
8282 9188 5.116084 TGGTATGGATTTGAGAGGAAAGG 57.884 43.478 0.00 0.00 0.00 3.11
8283 9189 6.183347 AGTTGGTATGGATTTGAGAGGAAAG 58.817 40.000 0.00 0.00 0.00 2.62
8284 9190 6.139679 AGTTGGTATGGATTTGAGAGGAAA 57.860 37.500 0.00 0.00 0.00 3.13
8285 9191 5.779241 AGTTGGTATGGATTTGAGAGGAA 57.221 39.130 0.00 0.00 0.00 3.36
8286 9192 5.779241 AAGTTGGTATGGATTTGAGAGGA 57.221 39.130 0.00 0.00 0.00 3.71
8287 9193 6.840780 AAAAGTTGGTATGGATTTGAGAGG 57.159 37.500 0.00 0.00 0.00 3.69
8288 9194 9.014297 ACTTAAAAGTTGGTATGGATTTGAGAG 57.986 33.333 0.00 0.00 35.21 3.20
8289 9195 8.934023 ACTTAAAAGTTGGTATGGATTTGAGA 57.066 30.769 0.00 0.00 35.21 3.27
8290 9196 9.014297 AGACTTAAAAGTTGGTATGGATTTGAG 57.986 33.333 0.00 0.00 39.88 3.02
8291 9197 8.792633 CAGACTTAAAAGTTGGTATGGATTTGA 58.207 33.333 0.00 0.00 39.88 2.69
8292 9198 8.028938 CCAGACTTAAAAGTTGGTATGGATTTG 58.971 37.037 12.27 0.00 39.88 2.32
8293 9199 7.728532 ACCAGACTTAAAAGTTGGTATGGATTT 59.271 33.333 19.34 3.00 42.80 2.17
8294 9200 7.238710 ACCAGACTTAAAAGTTGGTATGGATT 58.761 34.615 19.34 3.47 42.80 3.01
8295 9201 6.790319 ACCAGACTTAAAAGTTGGTATGGAT 58.210 36.000 19.34 3.94 42.80 3.41
8296 9202 6.195600 ACCAGACTTAAAAGTTGGTATGGA 57.804 37.500 19.34 0.00 42.80 3.41
8297 9203 6.488683 TGAACCAGACTTAAAAGTTGGTATGG 59.511 38.462 20.28 14.70 43.29 2.74
8298 9204 7.308589 CCTGAACCAGACTTAAAAGTTGGTATG 60.309 40.741 20.28 15.38 43.29 2.39
8299 9205 6.715264 CCTGAACCAGACTTAAAAGTTGGTAT 59.285 38.462 20.28 14.31 43.29 2.73
8300 9206 6.059484 CCTGAACCAGACTTAAAAGTTGGTA 58.941 40.000 20.28 11.35 43.29 3.25
8301 9207 4.887655 CCTGAACCAGACTTAAAAGTTGGT 59.112 41.667 16.97 16.97 44.59 3.67
8302 9208 4.887655 ACCTGAACCAGACTTAAAAGTTGG 59.112 41.667 16.11 16.11 39.88 3.77
8303 9209 6.451064 AACCTGAACCAGACTTAAAAGTTG 57.549 37.500 0.00 0.00 39.88 3.16
8304 9210 7.996644 TCATAACCTGAACCAGACTTAAAAGTT 59.003 33.333 0.00 0.00 39.88 2.66
8305 9211 7.514721 TCATAACCTGAACCAGACTTAAAAGT 58.485 34.615 0.00 0.00 43.16 2.66
8306 9212 7.979444 TCATAACCTGAACCAGACTTAAAAG 57.021 36.000 0.00 0.00 32.44 2.27
8307 9213 7.942341 ACATCATAACCTGAACCAGACTTAAAA 59.058 33.333 0.00 0.00 37.44 1.52
8344 9250 4.351938 TCACCGGTTCGCTCCACG 62.352 66.667 2.97 0.00 45.62 4.94
8351 9257 3.186047 GCCATCGTCACCGGTTCG 61.186 66.667 19.06 19.06 33.95 3.95
8352 9258 1.429148 GATGCCATCGTCACCGGTTC 61.429 60.000 2.97 0.00 33.95 3.62
8353 9259 1.449601 GATGCCATCGTCACCGGTT 60.450 57.895 2.97 0.00 33.95 4.44
8354 9260 2.186903 GATGCCATCGTCACCGGT 59.813 61.111 0.00 0.00 33.95 5.28
8355 9261 2.588877 GGATGCCATCGTCACCGG 60.589 66.667 0.00 0.00 33.95 5.28
8356 9262 2.961721 CGGATGCCATCGTCACCG 60.962 66.667 0.00 0.00 34.77 4.94
8357 9263 2.173669 CACGGATGCCATCGTCACC 61.174 63.158 0.00 0.00 37.53 4.02
8358 9264 1.148157 CTCACGGATGCCATCGTCAC 61.148 60.000 0.00 0.00 37.53 3.67
8359 9265 1.141665 CTCACGGATGCCATCGTCA 59.858 57.895 0.00 0.00 37.53 4.35
8360 9266 1.592669 CCTCACGGATGCCATCGTC 60.593 63.158 0.00 0.00 37.53 4.20
8361 9267 2.021068 CTCCTCACGGATGCCATCGT 62.021 60.000 0.00 0.00 39.01 3.73
8362 9268 1.300465 CTCCTCACGGATGCCATCG 60.300 63.158 0.00 0.00 39.01 3.84
8363 9269 1.070445 CCTCCTCACGGATGCCATC 59.930 63.158 0.00 0.00 39.01 3.51
8364 9270 1.690633 ACCTCCTCACGGATGCCAT 60.691 57.895 0.00 0.00 39.01 4.40
8365 9271 2.284625 ACCTCCTCACGGATGCCA 60.285 61.111 0.00 0.00 39.01 4.92
8366 9272 2.187946 CACCTCCTCACGGATGCC 59.812 66.667 0.00 0.00 39.01 4.40
8367 9273 2.187946 CCACCTCCTCACGGATGC 59.812 66.667 0.00 0.00 39.01 3.91
8368 9274 2.187946 GCCACCTCCTCACGGATG 59.812 66.667 0.00 0.00 39.01 3.51
8369 9275 2.284625 TGCCACCTCCTCACGGAT 60.285 61.111 0.00 0.00 39.01 4.18
8370 9276 3.311110 GTGCCACCTCCTCACGGA 61.311 66.667 0.00 0.00 37.82 4.69
8371 9277 3.177194 TTGTGCCACCTCCTCACGG 62.177 63.158 0.00 0.00 33.69 4.94
8372 9278 1.669115 CTTGTGCCACCTCCTCACG 60.669 63.158 0.00 0.00 33.69 4.35
8373 9279 1.302832 CCTTGTGCCACCTCCTCAC 60.303 63.158 0.00 0.00 0.00 3.51
8374 9280 1.059584 TTCCTTGTGCCACCTCCTCA 61.060 55.000 0.00 0.00 0.00 3.86
8375 9281 0.322008 CTTCCTTGTGCCACCTCCTC 60.322 60.000 0.00 0.00 0.00 3.71
8376 9282 1.763770 CTTCCTTGTGCCACCTCCT 59.236 57.895 0.00 0.00 0.00 3.69
8377 9283 1.303643 CCTTCCTTGTGCCACCTCC 60.304 63.158 0.00 0.00 0.00 4.30
8378 9284 1.973812 GCCTTCCTTGTGCCACCTC 60.974 63.158 0.00 0.00 0.00 3.85
8379 9285 2.116125 GCCTTCCTTGTGCCACCT 59.884 61.111 0.00 0.00 0.00 4.00
8380 9286 2.203480 TGCCTTCCTTGTGCCACC 60.203 61.111 0.00 0.00 0.00 4.61
8381 9287 1.228245 TCTGCCTTCCTTGTGCCAC 60.228 57.895 0.00 0.00 0.00 5.01
8382 9288 1.073722 CTCTGCCTTCCTTGTGCCA 59.926 57.895 0.00 0.00 0.00 4.92
8383 9289 1.073897 ACTCTGCCTTCCTTGTGCC 59.926 57.895 0.00 0.00 0.00 5.01
8384 9290 1.239968 CCACTCTGCCTTCCTTGTGC 61.240 60.000 0.00 0.00 0.00 4.57
8385 9291 0.109342 ACCACTCTGCCTTCCTTGTG 59.891 55.000 0.00 0.00 0.00 3.33
8386 9292 1.729586 TACCACTCTGCCTTCCTTGT 58.270 50.000 0.00 0.00 0.00 3.16
8387 9293 3.274288 GAATACCACTCTGCCTTCCTTG 58.726 50.000 0.00 0.00 0.00 3.61
8388 9294 2.093447 CGAATACCACTCTGCCTTCCTT 60.093 50.000 0.00 0.00 0.00 3.36
8389 9295 1.482593 CGAATACCACTCTGCCTTCCT 59.517 52.381 0.00 0.00 0.00 3.36
8390 9296 1.473434 CCGAATACCACTCTGCCTTCC 60.473 57.143 0.00 0.00 0.00 3.46
8391 9297 1.473434 CCCGAATACCACTCTGCCTTC 60.473 57.143 0.00 0.00 0.00 3.46
8392 9298 0.541863 CCCGAATACCACTCTGCCTT 59.458 55.000 0.00 0.00 0.00 4.35
8393 9299 0.325296 TCCCGAATACCACTCTGCCT 60.325 55.000 0.00 0.00 0.00 4.75
8394 9300 0.105039 CTCCCGAATACCACTCTGCC 59.895 60.000 0.00 0.00 0.00 4.85
8395 9301 0.105039 CCTCCCGAATACCACTCTGC 59.895 60.000 0.00 0.00 0.00 4.26
8396 9302 1.486211 ACCTCCCGAATACCACTCTG 58.514 55.000 0.00 0.00 0.00 3.35
8397 9303 2.249309 AACCTCCCGAATACCACTCT 57.751 50.000 0.00 0.00 0.00 3.24
8398 9304 3.055312 AGAAAACCTCCCGAATACCACTC 60.055 47.826 0.00 0.00 0.00 3.51
8399 9305 2.910977 AGAAAACCTCCCGAATACCACT 59.089 45.455 0.00 0.00 0.00 4.00
8400 9306 3.345508 AGAAAACCTCCCGAATACCAC 57.654 47.619 0.00 0.00 0.00 4.16
8401 9307 4.376225 AAAGAAAACCTCCCGAATACCA 57.624 40.909 0.00 0.00 0.00 3.25
8402 9308 4.157289 GGAAAAGAAAACCTCCCGAATACC 59.843 45.833 0.00 0.00 0.00 2.73
8403 9309 4.763279 TGGAAAAGAAAACCTCCCGAATAC 59.237 41.667 0.00 0.00 0.00 1.89
8404 9310 4.988029 TGGAAAAGAAAACCTCCCGAATA 58.012 39.130 0.00 0.00 0.00 1.75
8405 9311 3.839778 TGGAAAAGAAAACCTCCCGAAT 58.160 40.909 0.00 0.00 0.00 3.34
8406 9312 3.300239 TGGAAAAGAAAACCTCCCGAA 57.700 42.857 0.00 0.00 0.00 4.30
8407 9313 3.518992 ATGGAAAAGAAAACCTCCCGA 57.481 42.857 0.00 0.00 0.00 5.14
8408 9314 5.715434 TTTATGGAAAAGAAAACCTCCCG 57.285 39.130 0.00 0.00 0.00 5.14
8409 9315 7.506114 AGTTTTTATGGAAAAGAAAACCTCCC 58.494 34.615 6.86 0.00 40.85 4.30
8410 9316 7.381408 CGAGTTTTTATGGAAAAGAAAACCTCC 59.619 37.037 6.86 0.00 40.85 4.30
8411 9317 8.132995 TCGAGTTTTTATGGAAAAGAAAACCTC 58.867 33.333 6.86 0.00 40.85 3.85
8412 9318 8.002984 TCGAGTTTTTATGGAAAAGAAAACCT 57.997 30.769 6.86 0.00 40.85 3.50
8413 9319 8.637281 TTCGAGTTTTTATGGAAAAGAAAACC 57.363 30.769 6.86 0.00 40.85 3.27
8415 9321 8.760569 GCATTCGAGTTTTTATGGAAAAGAAAA 58.239 29.630 0.00 0.00 37.88 2.29
8416 9322 7.383843 GGCATTCGAGTTTTTATGGAAAAGAAA 59.616 33.333 0.00 0.00 37.88 2.52
8417 9323 6.866248 GGCATTCGAGTTTTTATGGAAAAGAA 59.134 34.615 0.00 0.00 37.88 2.52
8418 9324 6.015856 TGGCATTCGAGTTTTTATGGAAAAGA 60.016 34.615 0.00 0.00 37.88 2.52
8419 9325 6.155827 TGGCATTCGAGTTTTTATGGAAAAG 58.844 36.000 0.00 0.00 37.88 2.27
8420 9326 6.090483 TGGCATTCGAGTTTTTATGGAAAA 57.910 33.333 0.00 0.00 34.93 2.29
8421 9327 5.713792 TGGCATTCGAGTTTTTATGGAAA 57.286 34.783 0.00 0.00 0.00 3.13
8422 9328 5.713792 TTGGCATTCGAGTTTTTATGGAA 57.286 34.783 0.00 0.00 0.00 3.53
8423 9329 5.713792 TTTGGCATTCGAGTTTTTATGGA 57.286 34.783 0.00 0.00 0.00 3.41
8424 9330 6.966435 ATTTTGGCATTCGAGTTTTTATGG 57.034 33.333 0.00 0.00 0.00 2.74
8425 9331 8.711457 AGAAATTTTGGCATTCGAGTTTTTATG 58.289 29.630 0.00 0.00 0.00 1.90
8426 9332 8.831715 AGAAATTTTGGCATTCGAGTTTTTAT 57.168 26.923 0.00 0.00 0.00 1.40
8427 9333 7.114247 CGAGAAATTTTGGCATTCGAGTTTTTA 59.886 33.333 0.00 0.00 0.00 1.52
8428 9334 6.074356 CGAGAAATTTTGGCATTCGAGTTTTT 60.074 34.615 0.00 0.00 0.00 1.94
8429 9335 5.402270 CGAGAAATTTTGGCATTCGAGTTTT 59.598 36.000 0.00 0.00 0.00 2.43
8430 9336 4.917415 CGAGAAATTTTGGCATTCGAGTTT 59.083 37.500 0.00 0.00 0.00 2.66
8431 9337 4.215399 TCGAGAAATTTTGGCATTCGAGTT 59.785 37.500 0.00 0.00 32.57 3.01
8432 9338 3.751175 TCGAGAAATTTTGGCATTCGAGT 59.249 39.130 0.00 0.00 32.57 4.18
8433 9339 4.340894 TCGAGAAATTTTGGCATTCGAG 57.659 40.909 0.00 0.00 32.57 4.04
8434 9340 4.757799 TTCGAGAAATTTTGGCATTCGA 57.242 36.364 0.00 0.00 34.27 3.71
8435 9341 5.172053 GCTATTCGAGAAATTTTGGCATTCG 59.828 40.000 0.00 0.00 0.00 3.34
8436 9342 5.460091 GGCTATTCGAGAAATTTTGGCATTC 59.540 40.000 0.00 0.00 0.00 2.67
8437 9343 5.105392 TGGCTATTCGAGAAATTTTGGCATT 60.105 36.000 0.00 0.00 0.00 3.56
8438 9344 4.402155 TGGCTATTCGAGAAATTTTGGCAT 59.598 37.500 0.00 0.00 0.00 4.40
8439 9345 3.761218 TGGCTATTCGAGAAATTTTGGCA 59.239 39.130 0.00 0.00 0.00 4.92
8440 9346 4.370364 TGGCTATTCGAGAAATTTTGGC 57.630 40.909 0.00 0.00 0.00 4.52
8441 9347 5.745294 CACATGGCTATTCGAGAAATTTTGG 59.255 40.000 0.00 0.00 0.00 3.28
8442 9348 5.745294 CCACATGGCTATTCGAGAAATTTTG 59.255 40.000 0.00 0.00 0.00 2.44
8443 9349 5.163519 CCCACATGGCTATTCGAGAAATTTT 60.164 40.000 0.00 0.00 0.00 1.82
8444 9350 4.339247 CCCACATGGCTATTCGAGAAATTT 59.661 41.667 0.00 0.00 0.00 1.82
8445 9351 3.885297 CCCACATGGCTATTCGAGAAATT 59.115 43.478 0.00 0.00 0.00 1.82
8446 9352 3.480470 CCCACATGGCTATTCGAGAAAT 58.520 45.455 0.00 0.00 0.00 2.17
8447 9353 2.421388 CCCCACATGGCTATTCGAGAAA 60.421 50.000 0.00 0.00 0.00 2.52
8448 9354 1.140852 CCCCACATGGCTATTCGAGAA 59.859 52.381 0.00 0.00 0.00 2.87
8449 9355 0.758734 CCCCACATGGCTATTCGAGA 59.241 55.000 0.00 0.00 0.00 4.04
8450 9356 0.469917 ACCCCACATGGCTATTCGAG 59.530 55.000 0.00 0.00 0.00 4.04
8451 9357 0.180171 CACCCCACATGGCTATTCGA 59.820 55.000 0.00 0.00 0.00 3.71
8452 9358 1.447317 GCACCCCACATGGCTATTCG 61.447 60.000 0.00 0.00 0.00 3.34
8453 9359 0.106519 AGCACCCCACATGGCTATTC 60.107 55.000 0.00 0.00 34.25 1.75
8454 9360 1.143684 CTAGCACCCCACATGGCTATT 59.856 52.381 0.00 0.00 38.11 1.73
8455 9361 0.767375 CTAGCACCCCACATGGCTAT 59.233 55.000 0.00 0.00 38.11 2.97
8456 9362 0.326143 TCTAGCACCCCACATGGCTA 60.326 55.000 0.00 0.00 37.79 3.93
8457 9363 1.616327 TCTAGCACCCCACATGGCT 60.616 57.895 0.00 0.00 40.26 4.75
8458 9364 1.153086 CTCTAGCACCCCACATGGC 60.153 63.158 0.00 0.00 0.00 4.40
8459 9365 1.528824 CCTCTAGCACCCCACATGG 59.471 63.158 0.00 0.00 0.00 3.66
8460 9366 1.528824 CCCTCTAGCACCCCACATG 59.471 63.158 0.00 0.00 0.00 3.21
8461 9367 1.694169 CCCCTCTAGCACCCCACAT 60.694 63.158 0.00 0.00 0.00 3.21
8462 9368 2.285368 CCCCTCTAGCACCCCACA 60.285 66.667 0.00 0.00 0.00 4.17
8463 9369 3.798511 GCCCCTCTAGCACCCCAC 61.799 72.222 0.00 0.00 0.00 4.61
8464 9370 3.579451 AAGCCCCTCTAGCACCCCA 62.579 63.158 0.00 0.00 0.00 4.96
8465 9371 1.864263 AAAAGCCCCTCTAGCACCCC 61.864 60.000 0.00 0.00 0.00 4.95
8466 9372 0.394488 GAAAAGCCCCTCTAGCACCC 60.394 60.000 0.00 0.00 0.00 4.61
8467 9373 0.621082 AGAAAAGCCCCTCTAGCACC 59.379 55.000 0.00 0.00 0.00 5.01
8468 9374 3.629142 TTAGAAAAGCCCCTCTAGCAC 57.371 47.619 0.00 0.00 0.00 4.40
8469 9375 4.202524 TGTTTTAGAAAAGCCCCTCTAGCA 60.203 41.667 0.00 0.00 0.00 3.49
8470 9376 4.332828 TGTTTTAGAAAAGCCCCTCTAGC 58.667 43.478 0.00 0.00 0.00 3.42
8471 9377 6.071896 CCTTTGTTTTAGAAAAGCCCCTCTAG 60.072 42.308 0.00 0.00 33.02 2.43
8472 9378 5.773176 CCTTTGTTTTAGAAAAGCCCCTCTA 59.227 40.000 0.00 0.00 33.02 2.43
8473 9379 4.588951 CCTTTGTTTTAGAAAAGCCCCTCT 59.411 41.667 0.00 0.00 33.02 3.69
8474 9380 4.587262 TCCTTTGTTTTAGAAAAGCCCCTC 59.413 41.667 0.00 0.00 33.02 4.30
8475 9381 4.344102 GTCCTTTGTTTTAGAAAAGCCCCT 59.656 41.667 0.00 0.00 33.02 4.79
8476 9382 4.502604 GGTCCTTTGTTTTAGAAAAGCCCC 60.503 45.833 0.00 0.00 33.02 5.80
8477 9383 4.100344 TGGTCCTTTGTTTTAGAAAAGCCC 59.900 41.667 0.00 0.00 33.02 5.19
8478 9384 5.270893 TGGTCCTTTGTTTTAGAAAAGCC 57.729 39.130 0.00 0.00 33.02 4.35
8479 9385 6.292865 GCATTGGTCCTTTGTTTTAGAAAAGC 60.293 38.462 0.00 0.00 33.02 3.51
8480 9386 6.986231 AGCATTGGTCCTTTGTTTTAGAAAAG 59.014 34.615 0.00 0.00 33.95 2.27
8481 9387 6.883744 AGCATTGGTCCTTTGTTTTAGAAAA 58.116 32.000 0.00 0.00 0.00 2.29
8482 9388 6.478512 AGCATTGGTCCTTTGTTTTAGAAA 57.521 33.333 0.00 0.00 0.00 2.52
8483 9389 6.279882 CAAGCATTGGTCCTTTGTTTTAGAA 58.720 36.000 0.00 0.00 43.94 2.10
8484 9390 5.841810 CAAGCATTGGTCCTTTGTTTTAGA 58.158 37.500 0.00 0.00 43.94 2.10
8500 9406 5.079643 ACCACTATGAAAGGAACAAGCATT 58.920 37.500 0.00 0.00 0.00 3.56
8501 9407 4.666512 ACCACTATGAAAGGAACAAGCAT 58.333 39.130 0.00 0.00 0.00 3.79
8502 9408 4.098914 ACCACTATGAAAGGAACAAGCA 57.901 40.909 0.00 0.00 0.00 3.91
8503 9409 6.456988 CGAATACCACTATGAAAGGAACAAGC 60.457 42.308 0.00 0.00 0.00 4.01
8504 9410 6.456988 GCGAATACCACTATGAAAGGAACAAG 60.457 42.308 0.00 0.00 0.00 3.16
8505 9411 5.353123 GCGAATACCACTATGAAAGGAACAA 59.647 40.000 0.00 0.00 0.00 2.83
8506 9412 4.873827 GCGAATACCACTATGAAAGGAACA 59.126 41.667 0.00 0.00 0.00 3.18
8507 9413 4.873827 TGCGAATACCACTATGAAAGGAAC 59.126 41.667 0.00 0.00 0.00 3.62
8508 9414 5.092554 TGCGAATACCACTATGAAAGGAA 57.907 39.130 0.00 0.00 0.00 3.36
8509 9415 4.746535 TGCGAATACCACTATGAAAGGA 57.253 40.909 0.00 0.00 0.00 3.36
8510 9416 5.116180 TCTTGCGAATACCACTATGAAAGG 58.884 41.667 0.00 0.00 0.00 3.11
8511 9417 6.662414 TTCTTGCGAATACCACTATGAAAG 57.338 37.500 0.00 0.00 0.00 2.62
8512 9418 7.441890 TTTTCTTGCGAATACCACTATGAAA 57.558 32.000 0.00 0.00 0.00 2.69
8513 9419 7.441890 TTTTTCTTGCGAATACCACTATGAA 57.558 32.000 0.00 0.00 0.00 2.57
8541 9447 9.885934 GTGTTTTTCCAGTTTTGTTAAAAATGT 57.114 25.926 11.80 0.00 42.93 2.71
8542 9448 9.884465 TGTGTTTTTCCAGTTTTGTTAAAAATG 57.116 25.926 7.31 7.31 43.77 2.32
8575 9481 6.072175 ACAATAAACCTCTTATTTCGCAAGCA 60.072 34.615 0.00 0.00 37.18 3.91
8577 9483 6.747280 CCACAATAAACCTCTTATTTCGCAAG 59.253 38.462 0.00 0.00 0.00 4.01
8578 9484 6.207810 ACCACAATAAACCTCTTATTTCGCAA 59.792 34.615 0.00 0.00 0.00 4.85
8579 9485 5.708230 ACCACAATAAACCTCTTATTTCGCA 59.292 36.000 0.00 0.00 0.00 5.10
8580 9486 6.027749 CACCACAATAAACCTCTTATTTCGC 58.972 40.000 0.00 0.00 0.00 4.70
8581 9487 7.372451 TCACCACAATAAACCTCTTATTTCG 57.628 36.000 0.00 0.00 0.00 3.46
8582 9488 9.573133 CAATCACCACAATAAACCTCTTATTTC 57.427 33.333 0.00 0.00 0.00 2.17
8586 9536 5.123186 CGCAATCACCACAATAAACCTCTTA 59.877 40.000 0.00 0.00 0.00 2.10
8594 9544 3.932545 AAAGCGCAATCACCACAATAA 57.067 38.095 11.47 0.00 0.00 1.40
8597 9547 3.932545 ATTAAAGCGCAATCACCACAA 57.067 38.095 11.47 0.00 0.00 3.33
8598 9548 3.573598 CAATTAAAGCGCAATCACCACA 58.426 40.909 11.47 0.00 0.00 4.17
8599 9549 2.923020 CCAATTAAAGCGCAATCACCAC 59.077 45.455 11.47 0.00 0.00 4.16
8600 9550 2.094286 CCCAATTAAAGCGCAATCACCA 60.094 45.455 11.47 0.00 0.00 4.17
8601 9551 2.165437 TCCCAATTAAAGCGCAATCACC 59.835 45.455 11.47 0.00 0.00 4.02
8602 9552 3.502191 TCCCAATTAAAGCGCAATCAC 57.498 42.857 11.47 0.00 0.00 3.06
8603 9553 4.527509 TTTCCCAATTAAAGCGCAATCA 57.472 36.364 11.47 0.00 0.00 2.57
8604 9554 4.869861 ACATTTCCCAATTAAAGCGCAATC 59.130 37.500 11.47 0.00 0.00 2.67
8606 9556 4.241681 GACATTTCCCAATTAAAGCGCAA 58.758 39.130 11.47 0.00 0.00 4.85
8607 9557 3.367910 GGACATTTCCCAATTAAAGCGCA 60.368 43.478 11.47 0.00 35.57 6.09
8608 9558 3.119137 AGGACATTTCCCAATTAAAGCGC 60.119 43.478 0.00 0.00 44.10 5.92
8609 9559 4.082245 ACAGGACATTTCCCAATTAAAGCG 60.082 41.667 0.00 0.00 44.10 4.68
8611 9561 6.840780 AGACAGGACATTTCCCAATTAAAG 57.159 37.500 0.00 0.00 44.10 1.85
8612 9562 8.112822 TGATAGACAGGACATTTCCCAATTAAA 58.887 33.333 0.00 0.00 44.10 1.52
8613 9563 7.638444 TGATAGACAGGACATTTCCCAATTAA 58.362 34.615 0.00 0.00 44.10 1.40
8614 9564 7.206789 TGATAGACAGGACATTTCCCAATTA 57.793 36.000 0.00 0.00 44.10 1.40
8615 9565 6.078456 TGATAGACAGGACATTTCCCAATT 57.922 37.500 0.00 0.00 44.10 2.32
8616 9566 5.715439 TGATAGACAGGACATTTCCCAAT 57.285 39.130 0.00 0.00 44.10 3.16
8617 9567 5.512942 TTGATAGACAGGACATTTCCCAA 57.487 39.130 0.00 0.00 44.10 4.12
8619 9569 7.283329 ACTATTTGATAGACAGGACATTTCCC 58.717 38.462 0.00 0.00 38.36 3.97
8625 9575 9.696572 AGTAACTACTATTTGATAGACAGGACA 57.303 33.333 2.18 0.00 36.68 4.02
8652 9602 9.730420 GCGAAAAATATTATTTGAGTGGTACAT 57.270 29.630 2.48 0.00 44.52 2.29
8653 9603 8.731605 TGCGAAAAATATTATTTGAGTGGTACA 58.268 29.630 2.48 0.00 0.00 2.90
8654 9604 9.221775 CTGCGAAAAATATTATTTGAGTGGTAC 57.778 33.333 2.48 0.00 0.00 3.34
8655 9605 9.168451 TCTGCGAAAAATATTATTTGAGTGGTA 57.832 29.630 2.48 0.00 0.00 3.25
8656 9606 8.050778 TCTGCGAAAAATATTATTTGAGTGGT 57.949 30.769 2.48 0.00 0.00 4.16
8657 9607 9.520204 AATCTGCGAAAAATATTATTTGAGTGG 57.480 29.630 2.48 0.00 0.00 4.00
8691 9641 2.380064 TGATGGTGCTGGGTCTTTTT 57.620 45.000 0.00 0.00 0.00 1.94
8695 9645 1.341383 GGATTTGATGGTGCTGGGTCT 60.341 52.381 0.00 0.00 0.00 3.85
8697 9647 0.409092 TGGATTTGATGGTGCTGGGT 59.591 50.000 0.00 0.00 0.00 4.51
8698 9648 1.784358 ATGGATTTGATGGTGCTGGG 58.216 50.000 0.00 0.00 0.00 4.45
8699 9649 3.996150 GTATGGATTTGATGGTGCTGG 57.004 47.619 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.