Multiple sequence alignment - TraesCS5A01G376800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G376800 chr5A 100.000 2882 0 0 1 2882 574401678 574398797 0.000000e+00 5323.0
1 TraesCS5A01G376800 chr5A 91.076 381 34 0 1164 1544 546566487 546566867 1.530000e-142 516.0
2 TraesCS5A01G376800 chr5A 91.139 79 6 1 507 584 502603909 502603831 3.930000e-19 106.0
3 TraesCS5A01G376800 chr5D 89.829 1406 83 33 677 2060 456592106 456593473 0.000000e+00 1749.0
4 TraesCS5A01G376800 chr5D 92.720 261 12 4 234 493 456614740 456614486 1.260000e-98 370.0
5 TraesCS5A01G376800 chr5D 88.732 71 4 4 2075 2143 456593456 456593524 1.840000e-12 84.2
6 TraesCS5A01G376800 chr5B 89.735 1169 68 26 767 1920 558284119 558285250 0.000000e+00 1447.0
7 TraesCS5A01G376800 chr5B 82.131 610 90 4 2291 2882 356369187 356369795 3.310000e-139 505.0
8 TraesCS5A01G376800 chr5B 81.636 599 92 3 2302 2882 412283545 412284143 5.590000e-132 481.0
9 TraesCS5A01G376800 chr5B 93.103 87 6 0 152 238 14289015 14288929 8.380000e-26 128.0
10 TraesCS5A01G376800 chr7D 92.670 382 27 1 1164 1545 28782863 28782483 1.510000e-152 549.0
11 TraesCS5A01G376800 chr7D 91.089 101 9 0 144 244 431937005 431937105 1.390000e-28 137.0
12 TraesCS5A01G376800 chr7A 82.759 609 87 8 2292 2882 219166514 219167122 7.070000e-146 527.0
13 TraesCS5A01G376800 chr7A 92.208 77 5 1 508 583 712701045 712701121 1.090000e-19 108.0
14 TraesCS5A01G376800 chr7A 91.026 78 6 1 508 584 62477409 62477486 1.410000e-18 104.0
15 TraesCS5A01G376800 chr7A 91.026 78 6 1 508 584 725323899 725323976 1.410000e-18 104.0
16 TraesCS5A01G376800 chr7B 82.459 610 89 9 2291 2882 640720358 640720967 4.260000e-143 518.0
17 TraesCS5A01G376800 chr6D 82.508 606 91 6 2291 2882 336996735 336996131 4.260000e-143 518.0
18 TraesCS5A01G376800 chr6D 92.233 103 7 1 143 244 34809018 34808916 8.320000e-31 145.0
19 TraesCS5A01G376800 chr6D 100.000 29 0 0 64 92 471549952 471549980 1.000000e-03 54.7
20 TraesCS5A01G376800 chr3D 82.131 610 91 3 2291 2882 380179897 380180506 9.210000e-140 507.0
21 TraesCS5A01G376800 chr3D 92.632 95 7 0 152 246 569126398 569126492 1.390000e-28 137.0
22 TraesCS5A01G376800 chr3D 100.000 30 0 0 65 94 600829630 600829601 4.010000e-04 56.5
23 TraesCS5A01G376800 chrUn 82.043 607 91 6 2291 2879 331003984 331003378 4.290000e-138 501.0
24 TraesCS5A01G376800 chrUn 82.043 607 91 6 2291 2879 358260794 358260188 4.290000e-138 501.0
25 TraesCS5A01G376800 chr4B 81.803 610 93 11 2291 2882 504044879 504044270 1.990000e-136 496.0
26 TraesCS5A01G376800 chr4B 90.566 106 7 3 153 255 399119751 399119856 1.390000e-28 137.0
27 TraesCS5A01G376800 chr3B 91.429 105 9 0 1164 1268 819915953 819915849 8.320000e-31 145.0
28 TraesCS5A01G376800 chr1B 94.565 92 5 0 149 240 250420351 250420260 2.990000e-30 143.0
29 TraesCS5A01G376800 chr4A 92.000 100 8 0 149 248 605008726 605008627 1.080000e-29 141.0
30 TraesCS5A01G376800 chr4A 78.846 104 11 5 2 94 539325735 539325838 3.100000e-05 60.2
31 TraesCS5A01G376800 chr6B 91.753 97 8 0 151 247 534906757 534906853 5.010000e-28 135.0
32 TraesCS5A01G376800 chr6B 94.048 84 5 0 1166 1249 156278945 156279028 8.380000e-26 128.0
33 TraesCS5A01G376800 chr2B 91.000 100 9 0 152 251 453180970 453180871 5.010000e-28 135.0
34 TraesCS5A01G376800 chr6A 93.590 78 4 1 508 584 6898452 6898529 6.530000e-22 115.0
35 TraesCS5A01G376800 chr6A 92.308 78 5 1 508 584 475375146 475375223 3.040000e-20 110.0
36 TraesCS5A01G376800 chr6A 100.000 30 0 0 65 94 14362898 14362927 4.010000e-04 56.5
37 TraesCS5A01G376800 chr6A 100.000 30 0 0 65 94 483599620 483599649 4.010000e-04 56.5
38 TraesCS5A01G376800 chr6A 100.000 29 0 0 586 614 162312691 162312663 1.000000e-03 54.7
39 TraesCS5A01G376800 chr2A 92.308 78 5 1 508 584 264329950 264329873 3.040000e-20 110.0
40 TraesCS5A01G376800 chr2A 91.250 80 6 1 508 586 734092317 734092238 1.090000e-19 108.0
41 TraesCS5A01G376800 chr2A 90.123 81 6 2 506 584 20239093 20239013 1.410000e-18 104.0
42 TraesCS5A01G376800 chr2A 100.000 30 0 0 65 94 673128591 673128620 4.010000e-04 56.5
43 TraesCS5A01G376800 chr3A 78.302 106 11 5 1 94 127169617 127169512 1.120000e-04 58.4
44 TraesCS5A01G376800 chr3A 100.000 30 0 0 65 94 433950758 433950729 4.010000e-04 56.5
45 TraesCS5A01G376800 chr3A 88.889 45 4 1 2250 2294 603266488 603266531 1.000000e-03 54.7
46 TraesCS5A01G376800 chr1D 100.000 28 0 0 67 94 407613387 407613360 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G376800 chr5A 574398797 574401678 2881 True 5323.0 5323 100.0000 1 2882 1 chr5A.!!$R2 2881
1 TraesCS5A01G376800 chr5D 456592106 456593524 1418 False 916.6 1749 89.2805 677 2143 2 chr5D.!!$F1 1466
2 TraesCS5A01G376800 chr5B 558284119 558285250 1131 False 1447.0 1447 89.7350 767 1920 1 chr5B.!!$F3 1153
3 TraesCS5A01G376800 chr5B 356369187 356369795 608 False 505.0 505 82.1310 2291 2882 1 chr5B.!!$F1 591
4 TraesCS5A01G376800 chr5B 412283545 412284143 598 False 481.0 481 81.6360 2302 2882 1 chr5B.!!$F2 580
5 TraesCS5A01G376800 chr7A 219166514 219167122 608 False 527.0 527 82.7590 2292 2882 1 chr7A.!!$F2 590
6 TraesCS5A01G376800 chr7B 640720358 640720967 609 False 518.0 518 82.4590 2291 2882 1 chr7B.!!$F1 591
7 TraesCS5A01G376800 chr6D 336996131 336996735 604 True 518.0 518 82.5080 2291 2882 1 chr6D.!!$R2 591
8 TraesCS5A01G376800 chr3D 380179897 380180506 609 False 507.0 507 82.1310 2291 2882 1 chr3D.!!$F1 591
9 TraesCS5A01G376800 chrUn 331003378 331003984 606 True 501.0 501 82.0430 2291 2879 1 chrUn.!!$R1 588
10 TraesCS5A01G376800 chrUn 358260188 358260794 606 True 501.0 501 82.0430 2291 2879 1 chrUn.!!$R2 588
11 TraesCS5A01G376800 chr4B 504044270 504044879 609 True 496.0 496 81.8030 2291 2882 1 chr4B.!!$R1 591


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
89 90 0.036483 GGAAATTTGCGGGTTGCCAT 60.036 50.0 0.0 0.0 45.6 4.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2074 2122 0.103026 CGAAGACCCATCGCTCATGA 59.897 55.0 0.0 0.0 33.8 3.07 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.867233 GATGTATGCTGCTACGGTTGG 59.133 52.381 0.00 0.00 0.00 3.77
21 22 0.899019 TGTATGCTGCTACGGTTGGA 59.101 50.000 0.00 0.00 0.00 3.53
22 23 1.484653 TGTATGCTGCTACGGTTGGAT 59.515 47.619 0.00 0.00 0.00 3.41
23 24 1.867233 GTATGCTGCTACGGTTGGATG 59.133 52.381 0.00 0.00 0.00 3.51
24 25 0.541392 ATGCTGCTACGGTTGGATGA 59.459 50.000 0.00 0.00 0.00 2.92
25 26 0.391130 TGCTGCTACGGTTGGATGAC 60.391 55.000 0.00 0.00 0.00 3.06
26 27 1.421410 GCTGCTACGGTTGGATGACG 61.421 60.000 0.00 0.00 0.00 4.35
27 28 0.172578 CTGCTACGGTTGGATGACGA 59.827 55.000 0.00 0.00 0.00 4.20
28 29 0.821517 TGCTACGGTTGGATGACGAT 59.178 50.000 0.00 0.00 0.00 3.73
29 30 1.202371 TGCTACGGTTGGATGACGATC 60.202 52.381 0.00 0.00 0.00 3.69
30 31 1.067212 GCTACGGTTGGATGACGATCT 59.933 52.381 0.00 0.00 0.00 2.75
31 32 2.859032 GCTACGGTTGGATGACGATCTC 60.859 54.545 0.00 0.00 0.00 2.75
32 33 0.460311 ACGGTTGGATGACGATCTCC 59.540 55.000 0.00 0.00 0.00 3.71
33 34 0.747255 CGGTTGGATGACGATCTCCT 59.253 55.000 0.00 0.00 32.47 3.69
34 35 1.536922 CGGTTGGATGACGATCTCCTG 60.537 57.143 0.00 0.00 32.47 3.86
35 36 1.576356 GTTGGATGACGATCTCCTGC 58.424 55.000 0.00 0.00 32.47 4.85
36 37 0.103026 TTGGATGACGATCTCCTGCG 59.897 55.000 0.00 0.00 32.47 5.18
37 38 1.037579 TGGATGACGATCTCCTGCGT 61.038 55.000 0.00 0.00 44.33 5.24
41 42 2.750637 ACGATCTCCTGCGTCCGT 60.751 61.111 0.00 0.00 35.59 4.69
42 43 2.278206 CGATCTCCTGCGTCCGTG 60.278 66.667 0.00 0.00 0.00 4.94
43 44 2.885861 GATCTCCTGCGTCCGTGT 59.114 61.111 0.00 0.00 0.00 4.49
44 45 1.226717 GATCTCCTGCGTCCGTGTC 60.227 63.158 0.00 0.00 0.00 3.67
45 46 2.615262 GATCTCCTGCGTCCGTGTCC 62.615 65.000 0.00 0.00 0.00 4.02
46 47 3.680786 CTCCTGCGTCCGTGTCCA 61.681 66.667 0.00 0.00 0.00 4.02
47 48 2.994995 TCCTGCGTCCGTGTCCAT 60.995 61.111 0.00 0.00 0.00 3.41
48 49 2.815211 CCTGCGTCCGTGTCCATG 60.815 66.667 0.00 0.00 0.00 3.66
49 50 2.815211 CTGCGTCCGTGTCCATGG 60.815 66.667 4.97 4.97 38.85 3.66
50 51 3.295304 CTGCGTCCGTGTCCATGGA 62.295 63.158 11.44 11.44 43.85 3.41
54 55 2.662596 TCCGTGTCCATGGACTGC 59.337 61.111 37.92 29.32 44.80 4.40
55 56 2.436646 CCGTGTCCATGGACTGCC 60.437 66.667 37.92 25.99 44.80 4.85
56 57 2.436646 CGTGTCCATGGACTGCCC 60.437 66.667 37.92 23.91 44.80 5.36
57 58 2.044946 GTGTCCATGGACTGCCCC 60.045 66.667 37.92 20.31 44.80 5.80
58 59 3.338250 TGTCCATGGACTGCCCCC 61.338 66.667 37.92 16.54 44.80 5.40
59 60 3.017581 GTCCATGGACTGCCCCCT 61.018 66.667 33.47 0.00 41.57 4.79
60 61 3.016971 TCCATGGACTGCCCCCTG 61.017 66.667 11.44 0.00 0.00 4.45
61 62 3.341629 CCATGGACTGCCCCCTGT 61.342 66.667 5.56 0.00 0.00 4.00
62 63 2.273449 CATGGACTGCCCCCTGTC 59.727 66.667 0.00 0.00 38.69 3.51
74 75 3.702048 CCTGTCCGCGGGAGGAAA 61.702 66.667 30.19 8.06 43.97 3.13
75 76 2.584608 CTGTCCGCGGGAGGAAAT 59.415 61.111 27.83 0.00 42.77 2.17
76 77 1.078426 CTGTCCGCGGGAGGAAATT 60.078 57.895 27.83 0.00 42.77 1.82
77 78 0.676782 CTGTCCGCGGGAGGAAATTT 60.677 55.000 27.83 0.00 42.77 1.82
78 79 0.958382 TGTCCGCGGGAGGAAATTTG 60.958 55.000 27.83 0.00 42.77 2.32
79 80 2.043980 TCCGCGGGAGGAAATTTGC 61.044 57.895 27.83 0.68 37.36 3.68
80 81 2.100216 CGCGGGAGGAAATTTGCG 59.900 61.111 0.00 4.09 39.57 4.85
81 82 2.489751 GCGGGAGGAAATTTGCGG 59.510 61.111 3.87 0.00 0.00 5.69
82 83 3.063743 GCGGGAGGAAATTTGCGGG 62.064 63.158 3.87 0.00 0.00 6.13
83 84 1.677633 CGGGAGGAAATTTGCGGGT 60.678 57.895 3.87 0.00 0.00 5.28
84 85 1.248101 CGGGAGGAAATTTGCGGGTT 61.248 55.000 3.87 0.00 0.00 4.11
85 86 0.246360 GGGAGGAAATTTGCGGGTTG 59.754 55.000 3.87 0.00 0.00 3.77
86 87 0.389817 GGAGGAAATTTGCGGGTTGC 60.390 55.000 3.87 0.00 46.70 4.17
87 88 0.389817 GAGGAAATTTGCGGGTTGCC 60.390 55.000 3.87 0.00 45.60 4.52
88 89 1.118356 AGGAAATTTGCGGGTTGCCA 61.118 50.000 3.87 0.00 45.60 4.92
89 90 0.036483 GGAAATTTGCGGGTTGCCAT 60.036 50.000 0.00 0.00 45.60 4.40
90 91 1.610363 GGAAATTTGCGGGTTGCCATT 60.610 47.619 0.00 0.00 45.60 3.16
91 92 1.464219 GAAATTTGCGGGTTGCCATTG 59.536 47.619 0.00 0.00 45.60 2.82
92 93 0.321475 AATTTGCGGGTTGCCATTGG 60.321 50.000 0.00 0.00 45.60 3.16
93 94 1.190833 ATTTGCGGGTTGCCATTGGA 61.191 50.000 6.95 0.00 45.60 3.53
94 95 2.093537 TTTGCGGGTTGCCATTGGAC 62.094 55.000 6.95 0.00 45.60 4.02
95 96 3.758931 GCGGGTTGCCATTGGACC 61.759 66.667 6.95 5.92 37.76 4.46
99 100 3.681909 GGTTGCCATTGGACCCTAA 57.318 52.632 6.95 0.00 0.00 2.69
100 101 1.182667 GGTTGCCATTGGACCCTAAC 58.817 55.000 6.95 3.22 0.00 2.34
101 102 1.549037 GGTTGCCATTGGACCCTAACA 60.549 52.381 6.95 0.00 0.00 2.41
102 103 1.818674 GTTGCCATTGGACCCTAACAG 59.181 52.381 6.95 0.00 0.00 3.16
103 104 0.323360 TGCCATTGGACCCTAACAGC 60.323 55.000 6.95 0.00 0.00 4.40
104 105 0.323360 GCCATTGGACCCTAACAGCA 60.323 55.000 6.95 0.00 0.00 4.41
105 106 1.686115 GCCATTGGACCCTAACAGCAT 60.686 52.381 6.95 0.00 0.00 3.79
106 107 2.422803 GCCATTGGACCCTAACAGCATA 60.423 50.000 6.95 0.00 0.00 3.14
107 108 3.214328 CCATTGGACCCTAACAGCATAC 58.786 50.000 0.00 0.00 0.00 2.39
108 109 3.117888 CCATTGGACCCTAACAGCATACT 60.118 47.826 0.00 0.00 0.00 2.12
109 110 3.906720 TTGGACCCTAACAGCATACTC 57.093 47.619 0.00 0.00 0.00 2.59
110 111 2.116238 TGGACCCTAACAGCATACTCC 58.884 52.381 0.00 0.00 0.00 3.85
111 112 2.292918 TGGACCCTAACAGCATACTCCT 60.293 50.000 0.00 0.00 0.00 3.69
112 113 2.772515 GGACCCTAACAGCATACTCCTT 59.227 50.000 0.00 0.00 0.00 3.36
113 114 3.432326 GGACCCTAACAGCATACTCCTTG 60.432 52.174 0.00 0.00 0.00 3.61
114 115 3.182152 ACCCTAACAGCATACTCCTTGT 58.818 45.455 0.00 0.00 0.00 3.16
115 116 3.587506 ACCCTAACAGCATACTCCTTGTT 59.412 43.478 0.00 0.00 37.51 2.83
116 117 3.941483 CCCTAACAGCATACTCCTTGTTG 59.059 47.826 0.00 0.00 35.55 3.33
117 118 3.375299 CCTAACAGCATACTCCTTGTTGC 59.625 47.826 0.00 0.00 35.55 4.17
118 119 1.826385 ACAGCATACTCCTTGTTGCC 58.174 50.000 0.00 0.00 35.10 4.52
119 120 1.352352 ACAGCATACTCCTTGTTGCCT 59.648 47.619 0.00 0.00 35.10 4.75
120 121 2.571653 ACAGCATACTCCTTGTTGCCTA 59.428 45.455 0.00 0.00 35.10 3.93
121 122 3.009033 ACAGCATACTCCTTGTTGCCTAA 59.991 43.478 0.00 0.00 35.10 2.69
122 123 4.009675 CAGCATACTCCTTGTTGCCTAAA 58.990 43.478 0.00 0.00 35.10 1.85
123 124 4.458989 CAGCATACTCCTTGTTGCCTAAAA 59.541 41.667 0.00 0.00 35.10 1.52
124 125 5.048083 CAGCATACTCCTTGTTGCCTAAAAA 60.048 40.000 0.00 0.00 35.10 1.94
143 144 5.712152 AAAAACAGCATACTCCTTGAAGG 57.288 39.130 4.45 4.45 36.46 3.46
144 145 4.640771 AAACAGCATACTCCTTGAAGGA 57.359 40.909 14.16 14.16 43.43 3.36
145 146 4.640771 AACAGCATACTCCTTGAAGGAA 57.359 40.909 15.79 1.26 45.28 3.36
146 147 4.213564 ACAGCATACTCCTTGAAGGAAG 57.786 45.455 15.79 11.55 45.28 3.46
147 148 3.584848 ACAGCATACTCCTTGAAGGAAGT 59.415 43.478 15.79 16.29 45.28 3.01
148 149 4.777896 ACAGCATACTCCTTGAAGGAAGTA 59.222 41.667 15.79 17.74 45.28 2.24
149 150 5.426833 ACAGCATACTCCTTGAAGGAAGTAT 59.573 40.000 15.79 18.97 45.28 2.12
150 151 6.611642 ACAGCATACTCCTTGAAGGAAGTATA 59.388 38.462 23.52 13.02 45.28 1.47
151 152 7.151308 CAGCATACTCCTTGAAGGAAGTATAG 58.849 42.308 23.52 19.83 45.28 1.31
152 153 6.841755 AGCATACTCCTTGAAGGAAGTATAGT 59.158 38.462 23.52 16.53 45.28 2.12
153 154 8.005388 AGCATACTCCTTGAAGGAAGTATAGTA 58.995 37.037 23.52 17.71 45.28 1.82
154 155 8.083462 GCATACTCCTTGAAGGAAGTATAGTAC 58.917 40.741 23.52 15.28 45.28 2.73
155 156 9.357161 CATACTCCTTGAAGGAAGTATAGTACT 57.643 37.037 23.52 0.00 45.28 2.73
156 157 7.885009 ACTCCTTGAAGGAAGTATAGTACTC 57.115 40.000 15.79 0.00 45.28 2.59
157 158 6.834969 ACTCCTTGAAGGAAGTATAGTACTCC 59.165 42.308 15.79 0.00 45.28 3.85
158 159 6.982899 TCCTTGAAGGAAGTATAGTACTCCT 58.017 40.000 12.35 0.00 42.51 3.69
159 160 7.420029 TCCTTGAAGGAAGTATAGTACTCCTT 58.580 38.462 12.35 11.77 42.51 3.36
162 163 6.316440 GAAGGAAGTATAGTACTCCTTCGG 57.684 45.833 18.85 0.00 43.99 4.30
163 164 5.385628 AGGAAGTATAGTACTCCTTCGGT 57.614 43.478 17.08 9.11 38.26 4.69
164 165 6.506538 AGGAAGTATAGTACTCCTTCGGTA 57.493 41.667 17.08 0.00 38.26 4.02
165 166 6.904626 AGGAAGTATAGTACTCCTTCGGTAA 58.095 40.000 17.08 0.00 38.26 2.85
166 167 7.349598 AGGAAGTATAGTACTCCTTCGGTAAA 58.650 38.462 17.08 0.00 38.26 2.01
167 168 7.284261 AGGAAGTATAGTACTCCTTCGGTAAAC 59.716 40.741 17.08 7.83 38.26 2.01
168 169 7.284261 GGAAGTATAGTACTCCTTCGGTAAACT 59.716 40.741 17.08 0.00 38.26 2.66
169 170 9.331282 GAAGTATAGTACTCCTTCGGTAAACTA 57.669 37.037 0.00 0.00 38.26 2.24
170 171 9.686683 AAGTATAGTACTCCTTCGGTAAACTAA 57.313 33.333 0.00 0.00 38.26 2.24
171 172 9.859152 AGTATAGTACTCCTTCGGTAAACTAAT 57.141 33.333 0.00 0.00 32.47 1.73
179 180 8.358895 ACTCCTTCGGTAAACTAATATAAGAGC 58.641 37.037 0.00 0.00 0.00 4.09
180 181 7.365741 TCCTTCGGTAAACTAATATAAGAGCG 58.634 38.462 0.00 0.00 0.00 5.03
181 182 7.013655 TCCTTCGGTAAACTAATATAAGAGCGT 59.986 37.037 0.00 0.00 0.00 5.07
182 183 7.650903 CCTTCGGTAAACTAATATAAGAGCGTT 59.349 37.037 0.00 0.00 0.00 4.84
183 184 8.931385 TTCGGTAAACTAATATAAGAGCGTTT 57.069 30.769 0.00 0.00 0.00 3.60
185 186 9.669353 TCGGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
186 187 9.669353 CGGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
200 201 9.570488 AAGAGCGTTTAGATTACTAAAGTAGTG 57.430 33.333 0.00 0.00 45.42 2.74
201 202 8.954350 AGAGCGTTTAGATTACTAAAGTAGTGA 58.046 33.333 0.00 0.00 45.42 3.41
202 203 9.733219 GAGCGTTTAGATTACTAAAGTAGTGAT 57.267 33.333 0.00 0.00 45.42 3.06
213 214 9.918630 TTACTAAAGTAGTGATTTAAACGCTCT 57.081 29.630 7.00 4.27 39.81 4.09
214 215 8.828688 ACTAAAGTAGTGATTTAAACGCTCTT 57.171 30.769 7.00 7.86 37.69 2.85
215 216 9.918630 ACTAAAGTAGTGATTTAAACGCTCTTA 57.081 29.630 7.00 4.87 37.69 2.10
229 230 7.704789 AAACGCTCTTATATTAGTTTACGGG 57.295 36.000 0.00 0.00 31.14 5.28
230 231 5.776744 ACGCTCTTATATTAGTTTACGGGG 58.223 41.667 0.00 0.00 0.00 5.73
231 232 5.166398 CGCTCTTATATTAGTTTACGGGGG 58.834 45.833 0.00 0.00 0.00 5.40
312 313 7.913674 AAAAATACTTTTTGGACACTTGCAA 57.086 28.000 0.00 0.00 41.04 4.08
313 314 7.538303 AAAATACTTTTTGGACACTTGCAAG 57.462 32.000 24.84 24.84 34.12 4.01
314 315 5.852282 ATACTTTTTGGACACTTGCAAGT 57.148 34.783 26.36 26.36 40.60 3.16
315 316 6.952773 ATACTTTTTGGACACTTGCAAGTA 57.047 33.333 30.67 13.67 37.08 2.24
316 317 5.652994 ACTTTTTGGACACTTGCAAGTAA 57.347 34.783 30.67 18.81 37.08 2.24
317 318 6.031751 ACTTTTTGGACACTTGCAAGTAAA 57.968 33.333 30.67 23.12 37.08 2.01
318 319 6.099341 ACTTTTTGGACACTTGCAAGTAAAG 58.901 36.000 30.61 30.61 37.12 1.85
319 320 4.647424 TTTGGACACTTGCAAGTAAAGG 57.353 40.909 30.67 20.50 37.08 3.11
320 321 3.290948 TGGACACTTGCAAGTAAAGGT 57.709 42.857 30.67 23.48 37.08 3.50
321 322 4.425180 TGGACACTTGCAAGTAAAGGTA 57.575 40.909 30.67 12.99 37.08 3.08
322 323 4.980573 TGGACACTTGCAAGTAAAGGTAT 58.019 39.130 30.67 10.96 37.08 2.73
323 324 4.759693 TGGACACTTGCAAGTAAAGGTATG 59.240 41.667 30.67 18.10 37.08 2.39
324 325 4.760204 GGACACTTGCAAGTAAAGGTATGT 59.240 41.667 30.67 21.06 37.08 2.29
325 326 5.935789 GGACACTTGCAAGTAAAGGTATGTA 59.064 40.000 30.67 0.00 37.08 2.29
326 327 6.428771 GGACACTTGCAAGTAAAGGTATGTAA 59.571 38.462 30.67 0.00 37.08 2.41
327 328 7.040961 GGACACTTGCAAGTAAAGGTATGTAAA 60.041 37.037 30.67 0.00 37.08 2.01
328 329 7.871853 ACACTTGCAAGTAAAGGTATGTAAAG 58.128 34.615 30.67 15.58 37.08 1.85
329 330 7.040686 ACACTTGCAAGTAAAGGTATGTAAAGG 60.041 37.037 30.67 14.97 37.08 3.11
330 331 7.002276 ACTTGCAAGTAAAGGTATGTAAAGGT 58.998 34.615 30.25 0.00 37.52 3.50
331 332 8.158789 ACTTGCAAGTAAAGGTATGTAAAGGTA 58.841 33.333 30.25 0.00 37.52 3.08
332 333 7.910441 TGCAAGTAAAGGTATGTAAAGGTAC 57.090 36.000 0.00 0.00 0.00 3.34
333 334 7.451732 TGCAAGTAAAGGTATGTAAAGGTACA 58.548 34.615 0.00 0.00 44.29 2.90
334 335 7.388500 TGCAAGTAAAGGTATGTAAAGGTACAC 59.612 37.037 0.00 0.00 42.99 2.90
335 336 7.605309 GCAAGTAAAGGTATGTAAAGGTACACT 59.395 37.037 0.00 0.00 42.99 3.55
336 337 9.498176 CAAGTAAAGGTATGTAAAGGTACACTT 57.502 33.333 0.00 0.00 42.99 3.16
337 338 9.716531 AAGTAAAGGTATGTAAAGGTACACTTC 57.283 33.333 0.00 0.00 42.99 3.01
338 339 9.097946 AGTAAAGGTATGTAAAGGTACACTTCT 57.902 33.333 0.00 0.00 42.99 2.85
339 340 9.716531 GTAAAGGTATGTAAAGGTACACTTCTT 57.283 33.333 0.00 0.00 42.99 2.52
340 341 8.843885 AAAGGTATGTAAAGGTACACTTCTTC 57.156 34.615 0.00 0.00 42.99 2.87
341 342 7.793948 AGGTATGTAAAGGTACACTTCTTCT 57.206 36.000 0.00 0.00 42.99 2.85
342 343 8.203681 AGGTATGTAAAGGTACACTTCTTCTT 57.796 34.615 0.00 0.00 42.99 2.52
343 344 8.657712 AGGTATGTAAAGGTACACTTCTTCTTT 58.342 33.333 0.00 0.00 42.99 2.52
344 345 8.933807 GGTATGTAAAGGTACACTTCTTCTTTC 58.066 37.037 0.00 0.00 42.99 2.62
345 346 9.708092 GTATGTAAAGGTACACTTCTTCTTTCT 57.292 33.333 0.00 0.00 42.99 2.52
378 379 8.675040 AAAAACGCAAGATATTTTCTTAGCTC 57.325 30.769 0.00 0.00 42.98 4.09
379 380 5.643339 ACGCAAGATATTTTCTTAGCTCG 57.357 39.130 0.00 0.00 42.98 5.03
380 381 4.025647 ACGCAAGATATTTTCTTAGCTCGC 60.026 41.667 0.00 0.00 42.98 5.03
381 382 4.025730 CGCAAGATATTTTCTTAGCTCGCA 60.026 41.667 0.00 0.00 42.98 5.10
382 383 5.502382 CGCAAGATATTTTCTTAGCTCGCAA 60.502 40.000 0.00 0.00 42.98 4.85
383 384 6.433766 GCAAGATATTTTCTTAGCTCGCAAT 58.566 36.000 0.00 0.00 42.98 3.56
384 385 6.576684 GCAAGATATTTTCTTAGCTCGCAATC 59.423 38.462 0.00 0.00 42.98 2.67
385 386 6.459257 AGATATTTTCTTAGCTCGCAATCG 57.541 37.500 0.00 0.00 0.00 3.34
386 387 2.806288 TTTTCTTAGCTCGCAATCGC 57.194 45.000 0.00 0.00 35.26 4.58
387 388 1.720805 TTTCTTAGCTCGCAATCGCA 58.279 45.000 0.00 0.00 38.40 5.10
388 389 1.720805 TTCTTAGCTCGCAATCGCAA 58.279 45.000 0.00 0.00 38.40 4.85
389 390 1.720805 TCTTAGCTCGCAATCGCAAA 58.279 45.000 0.00 0.00 38.40 3.68
390 391 1.393539 TCTTAGCTCGCAATCGCAAAC 59.606 47.619 0.00 0.00 38.40 2.93
391 392 0.446222 TTAGCTCGCAATCGCAAACC 59.554 50.000 0.00 0.00 38.40 3.27
392 393 0.672091 TAGCTCGCAATCGCAAACCA 60.672 50.000 0.00 0.00 38.40 3.67
393 394 1.081509 GCTCGCAATCGCAAACCAA 60.082 52.632 0.00 0.00 38.40 3.67
394 395 0.456653 GCTCGCAATCGCAAACCAAT 60.457 50.000 0.00 0.00 38.40 3.16
395 396 1.538276 CTCGCAATCGCAAACCAATC 58.462 50.000 0.00 0.00 38.40 2.67
396 397 0.877743 TCGCAATCGCAAACCAATCA 59.122 45.000 0.00 0.00 38.40 2.57
397 398 1.268079 TCGCAATCGCAAACCAATCAA 59.732 42.857 0.00 0.00 38.40 2.57
398 399 2.057316 CGCAATCGCAAACCAATCAAA 58.943 42.857 0.00 0.00 38.40 2.69
399 400 2.159986 CGCAATCGCAAACCAATCAAAC 60.160 45.455 0.00 0.00 38.40 2.93
400 401 3.059166 GCAATCGCAAACCAATCAAACT 58.941 40.909 0.00 0.00 38.36 2.66
401 402 3.121778 GCAATCGCAAACCAATCAAACTC 59.878 43.478 0.00 0.00 38.36 3.01
402 403 4.549458 CAATCGCAAACCAATCAAACTCT 58.451 39.130 0.00 0.00 0.00 3.24
403 404 5.698832 CAATCGCAAACCAATCAAACTCTA 58.301 37.500 0.00 0.00 0.00 2.43
404 405 5.551760 ATCGCAAACCAATCAAACTCTAG 57.448 39.130 0.00 0.00 0.00 2.43
405 406 4.385825 TCGCAAACCAATCAAACTCTAGT 58.614 39.130 0.00 0.00 0.00 2.57
406 407 4.451096 TCGCAAACCAATCAAACTCTAGTC 59.549 41.667 0.00 0.00 0.00 2.59
407 408 4.666655 CGCAAACCAATCAAACTCTAGTCG 60.667 45.833 0.00 0.00 0.00 4.18
408 409 4.712763 CAAACCAATCAAACTCTAGTCGC 58.287 43.478 0.00 0.00 0.00 5.19
409 410 3.678056 ACCAATCAAACTCTAGTCGCA 57.322 42.857 0.00 0.00 0.00 5.10
410 411 4.002906 ACCAATCAAACTCTAGTCGCAA 57.997 40.909 0.00 0.00 0.00 4.85
411 412 4.385825 ACCAATCAAACTCTAGTCGCAAA 58.614 39.130 0.00 0.00 0.00 3.68
412 413 4.452455 ACCAATCAAACTCTAGTCGCAAAG 59.548 41.667 0.00 0.00 0.00 2.77
413 414 4.142816 CCAATCAAACTCTAGTCGCAAAGG 60.143 45.833 0.00 0.00 0.00 3.11
414 415 4.537135 ATCAAACTCTAGTCGCAAAGGA 57.463 40.909 0.00 0.00 0.00 3.36
415 416 4.330944 TCAAACTCTAGTCGCAAAGGAA 57.669 40.909 0.00 0.00 0.00 3.36
416 417 4.056050 TCAAACTCTAGTCGCAAAGGAAC 58.944 43.478 0.00 0.00 0.00 3.62
417 418 2.745515 ACTCTAGTCGCAAAGGAACC 57.254 50.000 0.00 0.00 0.00 3.62
418 419 1.067776 ACTCTAGTCGCAAAGGAACCG 60.068 52.381 0.00 0.00 0.00 4.44
419 420 0.245539 TCTAGTCGCAAAGGAACCGG 59.754 55.000 0.00 0.00 0.00 5.28
420 421 0.245539 CTAGTCGCAAAGGAACCGGA 59.754 55.000 9.46 0.00 0.00 5.14
421 422 0.245539 TAGTCGCAAAGGAACCGGAG 59.754 55.000 9.46 0.00 0.00 4.63
422 423 2.358247 TCGCAAAGGAACCGGAGC 60.358 61.111 9.46 0.00 0.00 4.70
423 424 3.431725 CGCAAAGGAACCGGAGCC 61.432 66.667 9.46 9.15 0.00 4.70
424 425 2.282180 GCAAAGGAACCGGAGCCA 60.282 61.111 9.46 0.00 0.00 4.75
425 426 1.901464 GCAAAGGAACCGGAGCCAA 60.901 57.895 9.46 0.00 0.00 4.52
426 427 1.250840 GCAAAGGAACCGGAGCCAAT 61.251 55.000 9.46 0.00 0.00 3.16
427 428 1.256812 CAAAGGAACCGGAGCCAATT 58.743 50.000 9.46 5.56 0.00 2.32
428 429 1.067635 CAAAGGAACCGGAGCCAATTG 60.068 52.381 9.46 13.80 0.00 2.32
429 430 1.250840 AAGGAACCGGAGCCAATTGC 61.251 55.000 9.46 0.00 41.71 3.56
438 439 4.496927 GCCAATTGCTTCGGCGGG 62.497 66.667 7.21 1.20 45.37 6.13
439 440 2.749839 CCAATTGCTTCGGCGGGA 60.750 61.111 7.21 0.00 45.37 5.14
440 441 2.339556 CCAATTGCTTCGGCGGGAA 61.340 57.895 7.21 0.00 45.37 3.97
460 461 2.865308 CGACGAGCACGGTAGACA 59.135 61.111 8.74 0.00 44.46 3.41
461 462 1.208358 CGACGAGCACGGTAGACAA 59.792 57.895 8.74 0.00 44.46 3.18
462 463 0.179171 CGACGAGCACGGTAGACAAT 60.179 55.000 8.74 0.00 44.46 2.71
463 464 1.546834 GACGAGCACGGTAGACAATC 58.453 55.000 8.74 0.00 44.46 2.67
464 465 0.172803 ACGAGCACGGTAGACAATCC 59.827 55.000 8.74 0.00 44.46 3.01
465 466 0.172578 CGAGCACGGTAGACAATCCA 59.827 55.000 0.00 0.00 35.72 3.41
466 467 1.202417 CGAGCACGGTAGACAATCCAT 60.202 52.381 0.00 0.00 35.72 3.41
467 468 2.474816 GAGCACGGTAGACAATCCATC 58.525 52.381 0.00 0.00 0.00 3.51
468 469 2.101582 GAGCACGGTAGACAATCCATCT 59.898 50.000 0.00 0.00 0.00 2.90
469 470 2.501723 AGCACGGTAGACAATCCATCTT 59.498 45.455 0.00 0.00 0.00 2.40
470 471 2.609459 GCACGGTAGACAATCCATCTTG 59.391 50.000 0.00 0.00 0.00 3.02
471 472 3.198068 CACGGTAGACAATCCATCTTGG 58.802 50.000 0.00 0.00 39.43 3.61
472 473 2.213499 CGGTAGACAATCCATCTTGGC 58.787 52.381 0.00 0.00 37.47 4.52
473 474 2.576615 GGTAGACAATCCATCTTGGCC 58.423 52.381 0.00 0.00 37.47 5.36
474 475 2.092429 GGTAGACAATCCATCTTGGCCA 60.092 50.000 0.00 0.00 37.47 5.36
475 476 2.134789 AGACAATCCATCTTGGCCAC 57.865 50.000 3.88 0.00 37.47 5.01
476 477 1.106285 GACAATCCATCTTGGCCACC 58.894 55.000 3.88 0.00 37.47 4.61
477 478 0.409092 ACAATCCATCTTGGCCACCA 59.591 50.000 3.88 0.00 37.47 4.17
478 479 1.007479 ACAATCCATCTTGGCCACCAT 59.993 47.619 3.88 0.00 37.47 3.55
479 480 1.684983 CAATCCATCTTGGCCACCATC 59.315 52.381 3.88 0.00 37.47 3.51
480 481 0.186873 ATCCATCTTGGCCACCATCC 59.813 55.000 3.88 0.00 37.47 3.51
481 482 1.825191 CCATCTTGGCCACCATCCG 60.825 63.158 3.88 0.00 31.53 4.18
482 483 1.077501 CATCTTGGCCACCATCCGT 60.078 57.895 3.88 0.00 31.53 4.69
483 484 1.097547 CATCTTGGCCACCATCCGTC 61.098 60.000 3.88 0.00 31.53 4.79
484 485 2.270874 ATCTTGGCCACCATCCGTCC 62.271 60.000 3.88 0.00 31.53 4.79
485 486 4.402528 TTGGCCACCATCCGTCCG 62.403 66.667 3.88 0.00 31.53 4.79
487 488 4.404098 GGCCACCATCCGTCCGTT 62.404 66.667 0.00 0.00 0.00 4.44
488 489 2.818274 GCCACCATCCGTCCGTTC 60.818 66.667 0.00 0.00 0.00 3.95
489 490 2.508439 CCACCATCCGTCCGTTCG 60.508 66.667 0.00 0.00 0.00 3.95
490 491 2.260434 CACCATCCGTCCGTTCGT 59.740 61.111 0.00 0.00 0.00 3.85
491 492 1.804326 CACCATCCGTCCGTTCGTC 60.804 63.158 0.00 0.00 0.00 4.20
492 493 2.202703 CCATCCGTCCGTTCGTCC 60.203 66.667 0.00 0.00 0.00 4.79
493 494 2.569657 CATCCGTCCGTTCGTCCA 59.430 61.111 0.00 0.00 0.00 4.02
494 495 1.141019 CATCCGTCCGTTCGTCCAT 59.859 57.895 0.00 0.00 0.00 3.41
495 496 0.870307 CATCCGTCCGTTCGTCCATC 60.870 60.000 0.00 0.00 0.00 3.51
496 497 2.012902 ATCCGTCCGTTCGTCCATCC 62.013 60.000 0.00 0.00 0.00 3.51
497 498 2.707849 CCGTCCGTTCGTCCATCCT 61.708 63.158 0.00 0.00 0.00 3.24
498 499 1.516386 CGTCCGTTCGTCCATCCTG 60.516 63.158 0.00 0.00 0.00 3.86
499 500 1.810030 GTCCGTTCGTCCATCCTGC 60.810 63.158 0.00 0.00 0.00 4.85
500 501 1.982395 TCCGTTCGTCCATCCTGCT 60.982 57.895 0.00 0.00 0.00 4.24
501 502 1.519455 CCGTTCGTCCATCCTGCTC 60.519 63.158 0.00 0.00 0.00 4.26
502 503 1.519455 CGTTCGTCCATCCTGCTCC 60.519 63.158 0.00 0.00 0.00 4.70
503 504 1.596934 GTTCGTCCATCCTGCTCCA 59.403 57.895 0.00 0.00 0.00 3.86
504 505 0.179000 GTTCGTCCATCCTGCTCCAT 59.821 55.000 0.00 0.00 0.00 3.41
505 506 0.178767 TTCGTCCATCCTGCTCCATG 59.821 55.000 0.00 0.00 0.00 3.66
506 507 1.227764 CGTCCATCCTGCTCCATGG 60.228 63.158 4.97 4.97 41.04 3.66
507 508 1.689243 CGTCCATCCTGCTCCATGGA 61.689 60.000 15.27 15.27 45.32 3.41
508 509 3.025986 TCCATCCTGCTCCATGGAA 57.974 52.632 17.00 0.00 44.68 3.53
509 510 1.297968 TCCATCCTGCTCCATGGAAA 58.702 50.000 17.00 6.25 44.68 3.13
510 511 1.640149 TCCATCCTGCTCCATGGAAAA 59.360 47.619 17.00 5.86 44.68 2.29
511 512 2.042842 TCCATCCTGCTCCATGGAAAAA 59.957 45.455 17.00 3.17 44.68 1.94
538 539 3.383162 AGACCAGGTCTCACGGATT 57.617 52.632 17.31 0.00 38.71 3.01
539 540 2.526888 AGACCAGGTCTCACGGATTA 57.473 50.000 17.31 0.00 38.71 1.75
540 541 2.379972 AGACCAGGTCTCACGGATTAG 58.620 52.381 17.31 0.00 38.71 1.73
541 542 0.824759 ACCAGGTCTCACGGATTAGC 59.175 55.000 0.00 0.00 0.00 3.09
542 543 0.824109 CCAGGTCTCACGGATTAGCA 59.176 55.000 0.00 0.00 0.00 3.49
543 544 1.414181 CCAGGTCTCACGGATTAGCAT 59.586 52.381 0.00 0.00 0.00 3.79
544 545 2.546795 CCAGGTCTCACGGATTAGCATC 60.547 54.545 0.00 0.00 0.00 3.91
545 546 1.689273 AGGTCTCACGGATTAGCATCC 59.311 52.381 0.00 0.00 45.40 3.51
546 547 1.689273 GGTCTCACGGATTAGCATCCT 59.311 52.381 1.90 0.00 46.57 3.24
547 548 2.546795 GGTCTCACGGATTAGCATCCTG 60.547 54.545 1.90 0.46 46.57 3.86
548 549 2.362397 GTCTCACGGATTAGCATCCTGA 59.638 50.000 1.90 4.12 46.57 3.86
549 550 3.006323 GTCTCACGGATTAGCATCCTGAT 59.994 47.826 1.90 0.00 46.57 2.90
550 551 3.006217 TCTCACGGATTAGCATCCTGATG 59.994 47.826 2.72 2.72 46.57 3.07
551 552 2.037641 TCACGGATTAGCATCCTGATGG 59.962 50.000 9.07 0.00 46.57 3.51
552 553 2.037641 CACGGATTAGCATCCTGATGGA 59.962 50.000 9.07 0.00 46.57 3.41
562 563 0.536724 TCCTGATGGATGACACGTGG 59.463 55.000 21.57 1.66 37.46 4.94
563 564 1.091771 CCTGATGGATGACACGTGGC 61.092 60.000 21.57 19.24 34.57 5.01
564 565 0.391528 CTGATGGATGACACGTGGCA 60.392 55.000 29.28 29.28 37.54 4.92
566 567 1.339920 TGATGGATGACACGTGGCATT 60.340 47.619 36.07 22.11 45.42 3.56
567 568 1.331756 GATGGATGACACGTGGCATTC 59.668 52.381 36.07 34.16 45.42 2.67
568 569 1.018752 TGGATGACACGTGGCATTCG 61.019 55.000 36.07 1.14 45.42 3.34
569 570 1.060937 GATGACACGTGGCATTCGC 59.939 57.895 36.07 20.92 45.42 4.70
570 571 1.634757 GATGACACGTGGCATTCGCA 61.635 55.000 36.07 9.07 45.42 5.10
571 572 1.233950 ATGACACGTGGCATTCGCAA 61.234 50.000 31.22 4.08 42.08 4.85
572 573 1.281353 GACACGTGGCATTCGCAAA 59.719 52.632 18.77 0.00 41.24 3.68
573 574 0.109781 GACACGTGGCATTCGCAAAT 60.110 50.000 18.77 0.00 41.24 2.32
574 575 0.109781 ACACGTGGCATTCGCAAATC 60.110 50.000 21.57 0.00 41.24 2.17
575 576 0.109827 CACGTGGCATTCGCAAATCA 60.110 50.000 7.95 0.00 41.24 2.57
576 577 0.109781 ACGTGGCATTCGCAAATCAC 60.110 50.000 0.00 0.00 41.24 3.06
577 578 0.109827 CGTGGCATTCGCAAATCACA 60.110 50.000 0.00 0.00 41.24 3.58
578 579 1.665448 CGTGGCATTCGCAAATCACAA 60.665 47.619 0.00 0.00 41.24 3.33
579 580 2.402305 GTGGCATTCGCAAATCACAAA 58.598 42.857 0.00 0.00 41.24 2.83
580 581 2.409378 GTGGCATTCGCAAATCACAAAG 59.591 45.455 0.00 0.00 41.24 2.77
581 582 1.391144 GGCATTCGCAAATCACAAAGC 59.609 47.619 0.00 0.00 41.24 3.51
582 583 2.060284 GCATTCGCAAATCACAAAGCA 58.940 42.857 0.00 0.00 38.36 3.91
583 584 2.669434 GCATTCGCAAATCACAAAGCAT 59.331 40.909 0.00 0.00 38.36 3.79
584 585 3.858812 GCATTCGCAAATCACAAAGCATA 59.141 39.130 0.00 0.00 38.36 3.14
585 586 4.505191 GCATTCGCAAATCACAAAGCATAT 59.495 37.500 0.00 0.00 38.36 1.78
586 587 5.555631 GCATTCGCAAATCACAAAGCATATG 60.556 40.000 0.00 0.00 38.36 1.78
587 588 4.961435 TCGCAAATCACAAAGCATATGA 57.039 36.364 6.97 0.00 0.00 2.15
588 589 4.912214 TCGCAAATCACAAAGCATATGAG 58.088 39.130 6.97 0.00 0.00 2.90
589 590 4.635324 TCGCAAATCACAAAGCATATGAGA 59.365 37.500 6.97 0.00 0.00 3.27
590 591 4.731961 CGCAAATCACAAAGCATATGAGAC 59.268 41.667 6.97 0.00 0.00 3.36
591 592 5.039333 GCAAATCACAAAGCATATGAGACC 58.961 41.667 6.97 0.00 0.00 3.85
592 593 5.163581 GCAAATCACAAAGCATATGAGACCT 60.164 40.000 6.97 0.00 0.00 3.85
593 594 6.263344 CAAATCACAAAGCATATGAGACCTG 58.737 40.000 6.97 0.00 0.00 4.00
594 595 3.877559 TCACAAAGCATATGAGACCTGG 58.122 45.455 6.97 0.00 0.00 4.45
595 596 3.264193 TCACAAAGCATATGAGACCTGGT 59.736 43.478 6.97 0.00 0.00 4.00
596 597 3.624861 CACAAAGCATATGAGACCTGGTC 59.375 47.826 19.20 19.20 0.00 4.02
597 598 3.521126 ACAAAGCATATGAGACCTGGTCT 59.479 43.478 28.70 28.70 46.42 3.85
614 615 9.793259 GACCTGGTCTCATATAATTTATTTCCA 57.207 33.333 19.53 0.00 0.00 3.53
628 629 5.596836 TTATTTCCATGAACCATCAAGGC 57.403 39.130 0.00 0.00 42.82 4.35
629 630 1.462616 TTCCATGAACCATCAAGGCG 58.537 50.000 0.00 0.00 42.82 5.52
630 631 0.394216 TCCATGAACCATCAAGGCGG 60.394 55.000 0.00 0.00 42.82 6.13
631 632 1.386525 CCATGAACCATCAAGGCGGG 61.387 60.000 0.00 0.00 43.14 6.13
632 633 0.680921 CATGAACCATCAAGGCGGGT 60.681 55.000 0.00 0.00 43.14 5.28
633 634 0.394352 ATGAACCATCAAGGCGGGTC 60.394 55.000 0.00 0.00 43.14 4.46
634 635 1.299976 GAACCATCAAGGCGGGTCT 59.700 57.895 0.00 0.00 43.14 3.85
635 636 0.744771 GAACCATCAAGGCGGGTCTC 60.745 60.000 0.00 0.00 43.14 3.36
636 637 1.488705 AACCATCAAGGCGGGTCTCA 61.489 55.000 0.00 0.00 43.14 3.27
637 638 1.450312 CCATCAAGGCGGGTCTCAC 60.450 63.158 0.00 0.00 0.00 3.51
638 639 1.450312 CATCAAGGCGGGTCTCACC 60.450 63.158 0.00 0.00 37.60 4.02
639 640 1.613630 ATCAAGGCGGGTCTCACCT 60.614 57.895 0.00 0.00 38.64 4.00
651 652 4.954875 GGGTCTCACCTGATTTAGATGAG 58.045 47.826 0.00 0.00 38.64 2.90
652 653 4.651503 GGGTCTCACCTGATTTAGATGAGA 59.348 45.833 0.00 0.00 42.63 3.27
654 655 5.860941 TCTCACCTGATTTAGATGAGACC 57.139 43.478 0.00 0.00 40.59 3.85
655 656 5.523588 TCTCACCTGATTTAGATGAGACCT 58.476 41.667 0.00 0.00 40.59 3.85
656 657 5.362143 TCTCACCTGATTTAGATGAGACCTG 59.638 44.000 0.00 0.00 40.59 4.00
657 658 4.406972 TCACCTGATTTAGATGAGACCTGG 59.593 45.833 0.00 0.00 0.00 4.45
658 659 4.163078 CACCTGATTTAGATGAGACCTGGT 59.837 45.833 0.00 0.00 0.00 4.00
659 660 4.407296 ACCTGATTTAGATGAGACCTGGTC 59.593 45.833 19.20 19.20 0.00 4.02
660 661 4.653341 CCTGATTTAGATGAGACCTGGTCT 59.347 45.833 28.70 28.70 46.42 3.85
696 697 7.473735 TTTTCATGAACCATGGTTATAAGCA 57.526 32.000 29.89 22.10 41.66 3.91
724 726 1.810755 CACGGAAAAGGAGGTAAAGCC 59.189 52.381 0.00 0.00 37.58 4.35
734 736 2.366833 GGTAAAGCCTGTCGCGTAC 58.633 57.895 5.77 3.66 44.76 3.67
746 748 4.314096 GCGTACCACGTGCGATAT 57.686 55.556 16.58 0.00 43.77 1.63
747 749 2.585263 GCGTACCACGTGCGATATT 58.415 52.632 16.58 0.00 43.77 1.28
748 750 1.757574 GCGTACCACGTGCGATATTA 58.242 50.000 16.58 0.00 43.77 0.98
749 751 2.322161 GCGTACCACGTGCGATATTAT 58.678 47.619 16.58 0.00 43.77 1.28
750 752 2.727798 GCGTACCACGTGCGATATTATT 59.272 45.455 16.58 0.00 43.77 1.40
751 753 3.913763 GCGTACCACGTGCGATATTATTA 59.086 43.478 16.58 0.00 43.77 0.98
752 754 4.560035 GCGTACCACGTGCGATATTATTAT 59.440 41.667 16.58 0.00 43.77 1.28
754 756 6.251163 GCGTACCACGTGCGATATTATTATTA 59.749 38.462 16.58 0.00 43.77 0.98
756 758 9.437045 CGTACCACGTGCGATATTATTATTATA 57.563 33.333 10.91 0.00 43.77 0.98
803 805 1.671379 GAACGGAAGCCCTCACACC 60.671 63.158 0.00 0.00 0.00 4.16
832 834 9.467796 CTTTATAAAAGACCTCCTCTTTCCATT 57.532 33.333 0.00 0.00 46.80 3.16
834 836 4.308526 AAAGACCTCCTCTTTCCATTCC 57.691 45.455 0.00 0.00 44.68 3.01
835 837 2.921221 AGACCTCCTCTTTCCATTCCA 58.079 47.619 0.00 0.00 0.00 3.53
836 838 3.468850 AGACCTCCTCTTTCCATTCCAT 58.531 45.455 0.00 0.00 0.00 3.41
841 843 3.950395 CTCCTCTTTCCATTCCATCAACC 59.050 47.826 0.00 0.00 0.00 3.77
843 845 3.309410 CCTCTTTCCATTCCATCAACCCT 60.309 47.826 0.00 0.00 0.00 4.34
844 846 3.950395 CTCTTTCCATTCCATCAACCCTC 59.050 47.826 0.00 0.00 0.00 4.30
846 848 0.926293 TCCATTCCATCAACCCTCCC 59.074 55.000 0.00 0.00 0.00 4.30
847 849 0.630673 CCATTCCATCAACCCTCCCA 59.369 55.000 0.00 0.00 0.00 4.37
848 850 1.006998 CCATTCCATCAACCCTCCCAA 59.993 52.381 0.00 0.00 0.00 4.12
849 851 2.559478 CCATTCCATCAACCCTCCCAAA 60.559 50.000 0.00 0.00 0.00 3.28
850 852 3.377573 CATTCCATCAACCCTCCCAAAT 58.622 45.455 0.00 0.00 0.00 2.32
860 864 1.407989 CCCTCCCAAATCTCAGCTCAC 60.408 57.143 0.00 0.00 0.00 3.51
868 872 2.810439 ATCTCAGCTCACGCCTAATC 57.190 50.000 0.00 0.00 36.60 1.75
878 882 0.452987 ACGCCTAATCGCACGACTTA 59.547 50.000 0.00 0.00 0.00 2.24
882 886 3.298317 GCCTAATCGCACGACTTAGTAG 58.702 50.000 14.94 0.00 0.00 2.57
883 887 3.003068 GCCTAATCGCACGACTTAGTAGA 59.997 47.826 0.00 0.00 0.00 2.59
884 888 4.774586 CCTAATCGCACGACTTAGTAGAG 58.225 47.826 0.00 0.00 0.00 2.43
885 889 4.272991 CCTAATCGCACGACTTAGTAGAGT 59.727 45.833 0.00 0.00 0.00 3.24
886 890 5.464722 CCTAATCGCACGACTTAGTAGAGTA 59.535 44.000 0.00 0.00 0.00 2.59
893 897 6.138236 CGCACGACTTAGTAGAGTATTAAACG 59.862 42.308 0.00 0.00 0.00 3.60
914 918 1.449353 GCCCGAGCCATCAATCTCT 59.551 57.895 0.00 0.00 0.00 3.10
922 926 1.260033 GCCATCAATCTCTTTCGCTCG 59.740 52.381 0.00 0.00 0.00 5.03
952 966 4.899239 CGTCTCCGGCCAGCCATC 62.899 72.222 9.78 0.00 35.37 3.51
953 967 4.554036 GTCTCCGGCCAGCCATCC 62.554 72.222 9.78 0.00 35.37 3.51
1300 1332 1.603236 CTTCCTCACGCTCTGCCTCT 61.603 60.000 0.00 0.00 0.00 3.69
1561 1593 3.999285 ACTGCCCGGACCTCTCCT 61.999 66.667 0.73 0.00 33.79 3.69
1562 1594 3.151022 CTGCCCGGACCTCTCCTC 61.151 72.222 0.73 0.00 33.79 3.71
1587 1619 2.938798 ACCTCCGGGGCCATCAAA 60.939 61.111 4.39 0.00 39.10 2.69
1697 1729 3.869272 CATTCTCGCCGGCTGCAC 61.869 66.667 26.68 0.00 41.33 4.57
1896 1928 5.623141 CGTCATGTGATCTCCTCTTTCAAGA 60.623 44.000 0.00 0.00 0.00 3.02
1900 1932 4.221703 TGTGATCTCCTCTTTCAAGACCTC 59.778 45.833 0.00 0.00 0.00 3.85
1901 1933 3.445450 TGATCTCCTCTTTCAAGACCTCG 59.555 47.826 0.00 0.00 0.00 4.63
1908 1940 3.067106 TCTTTCAAGACCTCGTTGATGC 58.933 45.455 0.00 0.00 33.95 3.91
1949 1993 3.305897 CGTAGCACAAATCTTGATGCGTA 59.694 43.478 0.00 0.00 40.30 4.42
1965 2009 4.300189 TGCGTATTTGAAACACTTGCTT 57.700 36.364 0.00 0.00 0.00 3.91
1966 2010 4.677584 TGCGTATTTGAAACACTTGCTTT 58.322 34.783 0.00 0.00 0.00 3.51
2025 2069 5.918576 AGAATAATGACGTATTCGATTGCGA 59.081 36.000 21.57 3.65 42.76 5.10
2036 2084 2.914861 TCGATTGCGATTTTGTGTGTG 58.085 42.857 0.00 0.00 42.51 3.82
2039 2087 2.483583 TTGCGATTTTGTGTGTGGAC 57.516 45.000 0.00 0.00 0.00 4.02
2044 2092 2.611751 CGATTTTGTGTGTGGACTGTCA 59.388 45.455 10.38 0.00 0.00 3.58
2047 2095 1.965935 TTGTGTGTGGACTGTCATGG 58.034 50.000 10.38 0.00 0.00 3.66
2060 2108 0.394352 GTCATGGGCGATGGGTCTTT 60.394 55.000 9.70 0.00 32.26 2.52
2061 2109 0.331278 TCATGGGCGATGGGTCTTTT 59.669 50.000 9.70 0.00 32.26 2.27
2062 2110 0.740737 CATGGGCGATGGGTCTTTTC 59.259 55.000 0.98 0.00 0.00 2.29
2065 2113 1.203001 TGGGCGATGGGTCTTTTCTTT 60.203 47.619 0.00 0.00 0.00 2.52
2066 2114 1.893137 GGGCGATGGGTCTTTTCTTTT 59.107 47.619 0.00 0.00 0.00 2.27
2067 2115 2.299013 GGGCGATGGGTCTTTTCTTTTT 59.701 45.455 0.00 0.00 0.00 1.94
2084 2132 3.763097 TTTTTGCGAATCATGAGCGAT 57.237 38.095 20.81 0.00 0.00 4.58
2085 2133 2.742954 TTTGCGAATCATGAGCGATG 57.257 45.000 20.81 2.59 0.00 3.84
2086 2134 0.939419 TTGCGAATCATGAGCGATGG 59.061 50.000 20.81 2.47 32.26 3.51
2087 2135 0.881600 TGCGAATCATGAGCGATGGG 60.882 55.000 20.81 0.00 32.26 4.00
2088 2136 0.882042 GCGAATCATGAGCGATGGGT 60.882 55.000 20.81 0.00 32.26 4.51
2089 2137 1.143305 CGAATCATGAGCGATGGGTC 58.857 55.000 13.69 0.00 41.07 4.46
2090 2138 1.269988 CGAATCATGAGCGATGGGTCT 60.270 52.381 13.69 0.00 41.26 3.85
2091 2139 2.804572 CGAATCATGAGCGATGGGTCTT 60.805 50.000 13.69 0.00 41.26 3.01
2092 2140 2.540265 ATCATGAGCGATGGGTCTTC 57.460 50.000 8.42 0.00 41.26 2.87
2093 2141 0.103026 TCATGAGCGATGGGTCTTCG 59.897 55.000 8.42 0.00 41.26 3.79
2127 2175 7.646130 AGGAATTTACGTGTGTACATTTGTTTG 59.354 33.333 0.00 0.00 32.52 2.93
2128 2176 7.432838 GGAATTTACGTGTGTACATTTGTTTGT 59.567 33.333 0.00 0.00 32.52 2.83
2129 2177 7.901874 ATTTACGTGTGTACATTTGTTTGTC 57.098 32.000 0.00 0.00 0.00 3.18
2130 2178 6.665474 TTACGTGTGTACATTTGTTTGTCT 57.335 33.333 0.00 0.00 0.00 3.41
2131 2179 5.151632 ACGTGTGTACATTTGTTTGTCTC 57.848 39.130 0.00 0.00 0.00 3.36
2132 2180 4.200827 CGTGTGTACATTTGTTTGTCTCG 58.799 43.478 0.00 0.00 0.00 4.04
2133 2181 4.523813 GTGTGTACATTTGTTTGTCTCGG 58.476 43.478 0.00 0.00 0.00 4.63
2134 2182 4.034742 GTGTGTACATTTGTTTGTCTCGGT 59.965 41.667 0.00 0.00 0.00 4.69
2135 2183 5.234757 GTGTGTACATTTGTTTGTCTCGGTA 59.765 40.000 0.00 0.00 0.00 4.02
2136 2184 5.234757 TGTGTACATTTGTTTGTCTCGGTAC 59.765 40.000 0.00 0.00 0.00 3.34
2155 2203 6.175712 GGTACGTAATAGATACTTCCTCCG 57.824 45.833 0.00 0.00 31.96 4.63
2156 2204 5.703130 GGTACGTAATAGATACTTCCTCCGT 59.297 44.000 0.00 0.00 31.96 4.69
2157 2205 6.205658 GGTACGTAATAGATACTTCCTCCGTT 59.794 42.308 0.00 0.00 31.96 4.44
2158 2206 6.311055 ACGTAATAGATACTTCCTCCGTTC 57.689 41.667 0.00 0.00 31.96 3.95
2159 2207 5.824624 ACGTAATAGATACTTCCTCCGTTCA 59.175 40.000 0.00 0.00 31.96 3.18
2160 2208 6.319658 ACGTAATAGATACTTCCTCCGTTCAA 59.680 38.462 0.00 0.00 31.96 2.69
2161 2209 7.148018 ACGTAATAGATACTTCCTCCGTTCAAA 60.148 37.037 0.00 0.00 31.96 2.69
2162 2210 7.703621 CGTAATAGATACTTCCTCCGTTCAAAA 59.296 37.037 0.00 0.00 31.96 2.44
2163 2211 9.374838 GTAATAGATACTTCCTCCGTTCAAAAA 57.625 33.333 0.00 0.00 0.00 1.94
2262 2310 7.447374 AATCCATGTCGAAATACTCAAAACA 57.553 32.000 0.00 0.00 0.00 2.83
2263 2311 7.630242 ATCCATGTCGAAATACTCAAAACAT 57.370 32.000 0.00 0.00 0.00 2.71
2264 2312 8.731275 ATCCATGTCGAAATACTCAAAACATA 57.269 30.769 0.00 0.00 0.00 2.29
2265 2313 8.731275 TCCATGTCGAAATACTCAAAACATAT 57.269 30.769 0.00 0.00 0.00 1.78
2266 2314 9.173021 TCCATGTCGAAATACTCAAAACATATT 57.827 29.630 0.00 0.00 0.00 1.28
2267 2315 9.787532 CCATGTCGAAATACTCAAAACATATTT 57.212 29.630 0.00 0.00 32.50 1.40
2285 2333 8.391075 ACATATTTATATTTGTGAACGGAGGG 57.609 34.615 0.00 0.00 0.00 4.30
2286 2334 7.447238 ACATATTTATATTTGTGAACGGAGGGG 59.553 37.037 0.00 0.00 0.00 4.79
2287 2335 2.729028 ATATTTGTGAACGGAGGGGG 57.271 50.000 0.00 0.00 0.00 5.40
2288 2336 1.364269 TATTTGTGAACGGAGGGGGT 58.636 50.000 0.00 0.00 0.00 4.95
2289 2337 1.364269 ATTTGTGAACGGAGGGGGTA 58.636 50.000 0.00 0.00 0.00 3.69
2354 2402 8.019094 AGATTTAATTACAAGCCACGTAAACAC 58.981 33.333 0.00 0.00 32.84 3.32
2355 2403 6.615264 TTAATTACAAGCCACGTAAACACA 57.385 33.333 0.00 0.00 32.84 3.72
2357 2405 2.032680 ACAAGCCACGTAAACACAGT 57.967 45.000 0.00 0.00 0.00 3.55
2360 2408 1.578583 AGCCACGTAAACACAGTCAC 58.421 50.000 0.00 0.00 0.00 3.67
2416 2465 0.534412 AACAGAGCATGTCCCTCTCG 59.466 55.000 0.00 0.00 43.00 4.04
2419 2468 1.064946 GAGCATGTCCCTCTCGACG 59.935 63.158 0.00 0.00 35.40 5.12
2428 2477 2.730404 GTCCCTCTCGACGAAGAAAAAC 59.270 50.000 0.00 0.00 0.00 2.43
2460 2509 0.596577 CTCTTCACCCGAACTCGACA 59.403 55.000 0.00 0.00 43.02 4.35
2470 2519 1.078759 GAACTCGACACGGCTCCATG 61.079 60.000 0.00 0.00 0.00 3.66
2485 2534 1.839354 TCCATGGTTGATCAGCAGCTA 59.161 47.619 12.58 0.00 35.97 3.32
2494 2543 0.598562 ATCAGCAGCTATACGGACCG 59.401 55.000 13.61 13.61 0.00 4.79
2495 2544 0.464916 TCAGCAGCTATACGGACCGA 60.465 55.000 23.38 4.52 0.00 4.69
2499 2548 1.864435 GCAGCTATACGGACCGACAAG 60.864 57.143 23.38 14.55 0.00 3.16
2546 2595 4.447290 TGTTGTTGAAAGAATCAGACCGA 58.553 39.130 0.00 0.00 39.77 4.69
2572 2621 2.754375 GTCCCCGGACACACCATT 59.246 61.111 0.73 0.00 44.02 3.16
2594 2643 3.136443 TGAACTTCAGAACTGACACCCAT 59.864 43.478 3.88 0.00 39.66 4.00
2623 2673 1.154073 GACGTCGAAGGAGGAACCG 60.154 63.158 0.00 0.00 44.74 4.44
2627 2677 0.319405 GTCGAAGGAGGAACCGGAAA 59.681 55.000 9.46 0.00 44.74 3.13
2630 2680 1.095600 GAAGGAGGAACCGGAAATGC 58.904 55.000 9.46 0.00 44.74 3.56
2645 2695 3.590466 ATGCCAGCCTCCAACCACC 62.590 63.158 0.00 0.00 0.00 4.61
2657 2707 1.118838 CAACCACCAACCCAACACAT 58.881 50.000 0.00 0.00 0.00 3.21
2666 2716 0.112995 ACCCAACACATGATGCACCT 59.887 50.000 0.00 0.00 0.00 4.00
2682 2732 0.398318 ACCTTCTTCCAGCTGTCACC 59.602 55.000 13.81 0.00 0.00 4.02
2683 2733 0.322008 CCTTCTTCCAGCTGTCACCC 60.322 60.000 13.81 0.00 0.00 4.61
2694 2744 0.108804 CTGTCACCCGCGTAGACAAT 60.109 55.000 20.68 0.00 41.27 2.71
2711 2761 1.732259 CAATTGTCTGCGTGTACTCCC 59.268 52.381 0.00 0.00 0.00 4.30
2714 2764 3.066190 TCTGCGTGTACTCCCGGG 61.066 66.667 16.85 16.85 0.00 5.73
2718 2768 3.751246 CGTGTACTCCCGGGCGAA 61.751 66.667 19.65 0.00 0.00 4.70
2719 2769 2.183555 GTGTACTCCCGGGCGAAG 59.816 66.667 19.65 12.26 0.00 3.79
2727 2777 2.813908 CCGGGCGAAGAAACCTCG 60.814 66.667 0.00 0.00 0.00 4.63
2737 2787 0.326264 AGAAACCTCGCTGCTCCATT 59.674 50.000 0.00 0.00 0.00 3.16
2741 2791 2.110967 CCTCGCTGCTCCATTGTGG 61.111 63.158 0.00 0.00 39.43 4.17
2753 2803 1.012086 CATTGTGGCATCGGAGACAG 58.988 55.000 0.00 0.00 42.51 3.51
2761 2811 2.942796 ATCGGAGACAGTGCCGCAA 61.943 57.895 0.00 0.00 46.79 4.85
2765 2815 1.237285 GGAGACAGTGCCGCAACAAT 61.237 55.000 0.00 0.00 0.00 2.71
2821 2887 1.449423 CCGACGCCATCCATGAACA 60.449 57.895 0.00 0.00 0.00 3.18
2868 2934 0.168788 AAACACGCGATGCCATCAAG 59.831 50.000 15.93 0.24 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.867233 CCAACCGTAGCAGCATACATC 59.133 52.381 0.00 0.00 0.00 3.06
1 2 1.484653 TCCAACCGTAGCAGCATACAT 59.515 47.619 0.00 0.00 0.00 2.29
2 3 0.899019 TCCAACCGTAGCAGCATACA 59.101 50.000 0.00 0.00 0.00 2.29
3 4 1.867233 CATCCAACCGTAGCAGCATAC 59.133 52.381 0.00 0.00 0.00 2.39
4 5 1.760029 TCATCCAACCGTAGCAGCATA 59.240 47.619 0.00 0.00 0.00 3.14
5 6 0.541392 TCATCCAACCGTAGCAGCAT 59.459 50.000 0.00 0.00 0.00 3.79
6 7 0.391130 GTCATCCAACCGTAGCAGCA 60.391 55.000 0.00 0.00 0.00 4.41
7 8 1.421410 CGTCATCCAACCGTAGCAGC 61.421 60.000 0.00 0.00 0.00 5.25
8 9 0.172578 TCGTCATCCAACCGTAGCAG 59.827 55.000 0.00 0.00 0.00 4.24
9 10 0.821517 ATCGTCATCCAACCGTAGCA 59.178 50.000 0.00 0.00 0.00 3.49
10 11 1.067212 AGATCGTCATCCAACCGTAGC 59.933 52.381 0.00 0.00 0.00 3.58
11 12 2.287668 GGAGATCGTCATCCAACCGTAG 60.288 54.545 0.00 0.00 35.54 3.51
12 13 1.679680 GGAGATCGTCATCCAACCGTA 59.320 52.381 0.00 0.00 35.54 4.02
13 14 0.460311 GGAGATCGTCATCCAACCGT 59.540 55.000 0.00 0.00 35.54 4.83
14 15 0.747255 AGGAGATCGTCATCCAACCG 59.253 55.000 1.91 0.00 38.12 4.44
15 16 1.808133 GCAGGAGATCGTCATCCAACC 60.808 57.143 1.91 0.00 38.12 3.77
16 17 1.576356 GCAGGAGATCGTCATCCAAC 58.424 55.000 1.91 0.00 38.12 3.77
17 18 0.103026 CGCAGGAGATCGTCATCCAA 59.897 55.000 1.91 0.00 38.12 3.53
18 19 1.037579 ACGCAGGAGATCGTCATCCA 61.038 55.000 1.91 0.00 38.12 3.41
19 20 1.736586 ACGCAGGAGATCGTCATCC 59.263 57.895 0.00 0.00 33.09 3.51
24 25 2.750637 ACGGACGCAGGAGATCGT 60.751 61.111 0.00 0.00 42.09 3.73
25 26 2.278206 CACGGACGCAGGAGATCG 60.278 66.667 0.00 0.00 0.00 3.69
26 27 1.226717 GACACGGACGCAGGAGATC 60.227 63.158 0.00 0.00 0.00 2.75
27 28 2.711922 GGACACGGACGCAGGAGAT 61.712 63.158 0.00 0.00 0.00 2.75
28 29 3.371063 GGACACGGACGCAGGAGA 61.371 66.667 0.00 0.00 0.00 3.71
29 30 3.006756 ATGGACACGGACGCAGGAG 62.007 63.158 0.00 0.00 0.00 3.69
30 31 2.994995 ATGGACACGGACGCAGGA 60.995 61.111 0.00 0.00 0.00 3.86
31 32 2.815211 CATGGACACGGACGCAGG 60.815 66.667 0.00 0.00 0.00 4.85
32 33 2.815211 CCATGGACACGGACGCAG 60.815 66.667 5.56 0.00 0.00 5.18
33 34 3.307108 TCCATGGACACGGACGCA 61.307 61.111 11.44 0.00 0.00 5.24
34 35 2.813908 GTCCATGGACACGGACGC 60.814 66.667 35.21 9.41 42.19 5.19
37 38 2.662596 GCAGTCCATGGACACGGA 59.337 61.111 39.38 6.02 46.76 4.69
38 39 2.436646 GGCAGTCCATGGACACGG 60.437 66.667 39.38 29.38 46.76 4.94
39 40 2.436646 GGGCAGTCCATGGACACG 60.437 66.667 39.38 30.99 46.76 4.49
40 41 2.044946 GGGGCAGTCCATGGACAC 60.045 66.667 39.38 30.92 46.76 3.67
41 42 3.338250 GGGGGCAGTCCATGGACA 61.338 66.667 39.38 8.48 46.76 4.02
42 43 3.017581 AGGGGGCAGTCCATGGAC 61.018 66.667 33.72 33.72 44.86 4.02
43 44 3.016971 CAGGGGGCAGTCCATGGA 61.017 66.667 11.44 11.44 35.19 3.41
44 45 3.341629 ACAGGGGGCAGTCCATGG 61.342 66.667 4.97 4.97 42.33 3.66
45 46 2.273449 GACAGGGGGCAGTCCATG 59.727 66.667 0.00 3.63 43.52 3.66
57 58 2.536997 AATTTCCTCCCGCGGACAGG 62.537 60.000 30.73 29.39 31.44 4.00
58 59 0.676782 AAATTTCCTCCCGCGGACAG 60.677 55.000 30.73 21.55 31.44 3.51
59 60 0.958382 CAAATTTCCTCCCGCGGACA 60.958 55.000 30.73 12.18 31.44 4.02
60 61 1.800681 CAAATTTCCTCCCGCGGAC 59.199 57.895 30.73 0.00 31.44 4.79
61 62 2.043980 GCAAATTTCCTCCCGCGGA 61.044 57.895 30.73 12.25 0.00 5.54
62 63 2.489751 GCAAATTTCCTCCCGCGG 59.510 61.111 21.04 21.04 0.00 6.46
63 64 2.100216 CGCAAATTTCCTCCCGCG 59.900 61.111 0.00 0.00 36.47 6.46
64 65 2.489751 CCGCAAATTTCCTCCCGC 59.510 61.111 0.00 0.00 0.00 6.13
65 66 1.248101 AACCCGCAAATTTCCTCCCG 61.248 55.000 0.00 0.00 0.00 5.14
66 67 0.246360 CAACCCGCAAATTTCCTCCC 59.754 55.000 0.00 0.00 0.00 4.30
67 68 0.389817 GCAACCCGCAAATTTCCTCC 60.390 55.000 0.00 0.00 41.79 4.30
68 69 0.389817 GGCAACCCGCAAATTTCCTC 60.390 55.000 0.00 0.00 45.17 3.71
69 70 1.118356 TGGCAACCCGCAAATTTCCT 61.118 50.000 0.00 0.00 45.17 3.36
70 71 0.036483 ATGGCAACCCGCAAATTTCC 60.036 50.000 0.00 0.00 45.17 3.13
71 72 1.464219 CAATGGCAACCCGCAAATTTC 59.536 47.619 0.00 0.00 45.17 2.17
72 73 1.521580 CAATGGCAACCCGCAAATTT 58.478 45.000 0.00 0.00 45.17 1.82
73 74 0.321475 CCAATGGCAACCCGCAAATT 60.321 50.000 0.00 0.00 45.17 1.82
74 75 1.190833 TCCAATGGCAACCCGCAAAT 61.191 50.000 0.00 0.00 45.17 2.32
75 76 1.834378 TCCAATGGCAACCCGCAAA 60.834 52.632 0.00 0.00 45.17 3.68
76 77 2.203552 TCCAATGGCAACCCGCAA 60.204 55.556 0.00 0.00 45.17 4.85
77 78 2.988684 GTCCAATGGCAACCCGCA 60.989 61.111 0.00 0.00 45.17 5.69
78 79 3.758931 GGTCCAATGGCAACCCGC 61.759 66.667 0.00 0.00 41.28 6.13
79 80 3.068064 GGGTCCAATGGCAACCCG 61.068 66.667 12.77 0.00 43.08 5.28
81 82 1.182667 GTTAGGGTCCAATGGCAACC 58.817 55.000 1.73 1.73 0.00 3.77
82 83 1.818674 CTGTTAGGGTCCAATGGCAAC 59.181 52.381 0.00 0.00 0.00 4.17
83 84 1.890573 GCTGTTAGGGTCCAATGGCAA 60.891 52.381 0.00 0.00 0.00 4.52
84 85 0.323360 GCTGTTAGGGTCCAATGGCA 60.323 55.000 0.00 0.00 0.00 4.92
85 86 0.323360 TGCTGTTAGGGTCCAATGGC 60.323 55.000 0.00 0.00 0.00 4.40
86 87 2.442236 ATGCTGTTAGGGTCCAATGG 57.558 50.000 0.00 0.00 0.00 3.16
87 88 4.130118 GAGTATGCTGTTAGGGTCCAATG 58.870 47.826 0.00 0.00 0.00 2.82
88 89 3.136626 GGAGTATGCTGTTAGGGTCCAAT 59.863 47.826 0.00 0.00 0.00 3.16
89 90 2.504175 GGAGTATGCTGTTAGGGTCCAA 59.496 50.000 0.00 0.00 0.00 3.53
90 91 2.116238 GGAGTATGCTGTTAGGGTCCA 58.884 52.381 0.00 0.00 0.00 4.02
91 92 2.399580 AGGAGTATGCTGTTAGGGTCC 58.600 52.381 0.00 0.00 32.93 4.46
92 93 3.197983 ACAAGGAGTATGCTGTTAGGGTC 59.802 47.826 0.00 0.00 36.28 4.46
93 94 3.182152 ACAAGGAGTATGCTGTTAGGGT 58.818 45.455 0.00 0.00 36.28 4.34
94 95 3.914426 ACAAGGAGTATGCTGTTAGGG 57.086 47.619 0.00 0.00 36.28 3.53
95 96 3.375299 GCAACAAGGAGTATGCTGTTAGG 59.625 47.826 0.00 0.00 36.28 2.69
96 97 3.375299 GGCAACAAGGAGTATGCTGTTAG 59.625 47.826 0.00 0.00 36.28 2.34
97 98 3.009033 AGGCAACAAGGAGTATGCTGTTA 59.991 43.478 0.00 0.00 36.28 2.41
98 99 2.162681 GGCAACAAGGAGTATGCTGTT 58.837 47.619 0.00 0.00 36.28 3.16
99 100 1.352352 AGGCAACAAGGAGTATGCTGT 59.648 47.619 0.00 0.00 36.28 4.40
100 101 2.119801 AGGCAACAAGGAGTATGCTG 57.880 50.000 0.00 0.00 36.28 4.41
101 102 4.301072 TTTAGGCAACAAGGAGTATGCT 57.699 40.909 0.00 0.00 40.15 3.79
102 103 5.385509 TTTTTAGGCAACAAGGAGTATGC 57.614 39.130 0.00 0.00 41.41 3.14
121 122 5.385198 TCCTTCAAGGAGTATGCTGTTTTT 58.615 37.500 0.34 0.00 40.06 1.94
122 123 4.985538 TCCTTCAAGGAGTATGCTGTTTT 58.014 39.130 0.34 0.00 40.06 2.43
123 124 4.640771 TCCTTCAAGGAGTATGCTGTTT 57.359 40.909 0.34 0.00 40.06 2.83
124 125 4.042187 ACTTCCTTCAAGGAGTATGCTGTT 59.958 41.667 6.17 0.00 46.73 3.16
125 126 3.584848 ACTTCCTTCAAGGAGTATGCTGT 59.415 43.478 6.17 0.00 46.73 4.40
126 127 4.213564 ACTTCCTTCAAGGAGTATGCTG 57.786 45.455 6.17 0.00 46.73 4.41
127 128 6.841755 ACTATACTTCCTTCAAGGAGTATGCT 59.158 38.462 24.69 14.21 46.73 3.79
128 129 7.056844 ACTATACTTCCTTCAAGGAGTATGC 57.943 40.000 24.69 0.00 46.73 3.14
129 130 9.357161 AGTACTATACTTCCTTCAAGGAGTATG 57.643 37.037 24.69 19.40 46.73 2.39
130 131 9.577222 GAGTACTATACTTCCTTCAAGGAGTAT 57.423 37.037 22.14 22.14 46.73 2.12
131 132 7.997803 GGAGTACTATACTTCCTTCAAGGAGTA 59.002 40.741 6.17 11.47 46.73 2.59
132 133 6.834969 GGAGTACTATACTTCCTTCAAGGAGT 59.165 42.308 6.17 9.66 46.73 3.85
133 134 7.064229 AGGAGTACTATACTTCCTTCAAGGAG 58.936 42.308 6.17 3.89 46.73 3.69
134 135 6.982899 AGGAGTACTATACTTCCTTCAAGGA 58.017 40.000 0.34 0.34 44.10 3.36
135 136 7.663043 AAGGAGTACTATACTTCCTTCAAGG 57.337 40.000 0.00 0.00 39.72 3.61
157 158 8.571461 AACGCTCTTATATTAGTTTACCGAAG 57.429 34.615 0.00 0.00 0.00 3.79
158 159 8.931385 AAACGCTCTTATATTAGTTTACCGAA 57.069 30.769 0.00 0.00 31.14 4.30
159 160 9.669353 CTAAACGCTCTTATATTAGTTTACCGA 57.331 33.333 0.00 0.00 34.29 4.69
160 161 9.669353 TCTAAACGCTCTTATATTAGTTTACCG 57.331 33.333 0.00 0.00 34.29 4.02
174 175 9.570488 CACTACTTTAGTAATCTAAACGCTCTT 57.430 33.333 0.00 0.00 40.05 2.85
175 176 8.954350 TCACTACTTTAGTAATCTAAACGCTCT 58.046 33.333 0.00 0.00 40.05 4.09
176 177 9.733219 ATCACTACTTTAGTAATCTAAACGCTC 57.267 33.333 0.00 0.00 40.05 5.03
187 188 9.918630 AGAGCGTTTAAATCACTACTTTAGTAA 57.081 29.630 0.00 0.00 37.23 2.24
188 189 9.918630 AAGAGCGTTTAAATCACTACTTTAGTA 57.081 29.630 0.00 0.00 37.23 1.82
189 190 8.828688 AAGAGCGTTTAAATCACTACTTTAGT 57.171 30.769 0.00 0.00 40.28 2.24
203 204 9.248291 CCCGTAAACTAATATAAGAGCGTTTAA 57.752 33.333 0.00 0.00 31.24 1.52
204 205 7.867403 CCCCGTAAACTAATATAAGAGCGTTTA 59.133 37.037 0.00 0.00 0.00 2.01
205 206 6.703165 CCCCGTAAACTAATATAAGAGCGTTT 59.297 38.462 0.00 0.00 0.00 3.60
206 207 6.218746 CCCCGTAAACTAATATAAGAGCGTT 58.781 40.000 0.00 0.00 0.00 4.84
207 208 5.279156 CCCCCGTAAACTAATATAAGAGCGT 60.279 44.000 0.00 0.00 0.00 5.07
208 209 5.166398 CCCCCGTAAACTAATATAAGAGCG 58.834 45.833 0.00 0.00 0.00 5.03
289 290 7.102993 ACTTGCAAGTGTCCAAAAAGTATTTT 58.897 30.769 30.66 0.00 43.80 1.82
290 291 6.639563 ACTTGCAAGTGTCCAAAAAGTATTT 58.360 32.000 30.66 0.00 37.71 1.40
291 292 6.220726 ACTTGCAAGTGTCCAAAAAGTATT 57.779 33.333 30.66 0.00 37.98 1.89
292 293 5.852282 ACTTGCAAGTGTCCAAAAAGTAT 57.148 34.783 30.66 0.66 37.98 2.12
293 294 6.761099 TTACTTGCAAGTGTCCAAAAAGTA 57.239 33.333 36.50 13.57 40.07 2.24
294 295 5.652994 TTACTTGCAAGTGTCCAAAAAGT 57.347 34.783 36.50 12.87 40.07 2.66
295 296 5.519927 CCTTTACTTGCAAGTGTCCAAAAAG 59.480 40.000 36.50 31.48 40.07 2.27
296 297 5.046950 ACCTTTACTTGCAAGTGTCCAAAAA 60.047 36.000 36.50 26.03 40.07 1.94
297 298 4.464597 ACCTTTACTTGCAAGTGTCCAAAA 59.535 37.500 36.50 26.64 40.07 2.44
298 299 4.020543 ACCTTTACTTGCAAGTGTCCAAA 58.979 39.130 36.50 26.95 40.07 3.28
299 300 3.626930 ACCTTTACTTGCAAGTGTCCAA 58.373 40.909 36.50 22.51 40.07 3.53
300 301 3.290948 ACCTTTACTTGCAAGTGTCCA 57.709 42.857 36.50 18.06 40.07 4.02
301 302 4.760204 ACATACCTTTACTTGCAAGTGTCC 59.240 41.667 36.50 0.00 40.07 4.02
302 303 5.941948 ACATACCTTTACTTGCAAGTGTC 57.058 39.130 36.50 0.00 40.07 3.67
303 304 7.040686 CCTTTACATACCTTTACTTGCAAGTGT 60.041 37.037 36.50 27.71 40.07 3.55
304 305 7.040686 ACCTTTACATACCTTTACTTGCAAGTG 60.041 37.037 36.50 23.99 40.07 3.16
305 306 7.002276 ACCTTTACATACCTTTACTTGCAAGT 58.998 34.615 32.97 32.97 42.91 3.16
306 307 7.448748 ACCTTTACATACCTTTACTTGCAAG 57.551 36.000 24.84 24.84 0.00 4.01
307 308 7.937942 TGTACCTTTACATACCTTTACTTGCAA 59.062 33.333 0.00 0.00 32.98 4.08
308 309 7.388500 GTGTACCTTTACATACCTTTACTTGCA 59.612 37.037 0.00 0.00 40.40 4.08
309 310 7.605309 AGTGTACCTTTACATACCTTTACTTGC 59.395 37.037 0.00 0.00 40.40 4.01
310 311 9.498176 AAGTGTACCTTTACATACCTTTACTTG 57.502 33.333 0.00 0.00 40.40 3.16
311 312 9.716531 GAAGTGTACCTTTACATACCTTTACTT 57.283 33.333 0.00 0.00 40.40 2.24
312 313 9.097946 AGAAGTGTACCTTTACATACCTTTACT 57.902 33.333 0.00 0.00 40.40 2.24
313 314 9.716531 AAGAAGTGTACCTTTACATACCTTTAC 57.283 33.333 0.00 0.00 40.40 2.01
314 315 9.933723 GAAGAAGTGTACCTTTACATACCTTTA 57.066 33.333 0.00 0.00 40.40 1.85
315 316 8.657712 AGAAGAAGTGTACCTTTACATACCTTT 58.342 33.333 0.00 0.00 40.40 3.11
316 317 8.203681 AGAAGAAGTGTACCTTTACATACCTT 57.796 34.615 0.00 0.00 40.40 3.50
317 318 7.793948 AGAAGAAGTGTACCTTTACATACCT 57.206 36.000 0.00 0.00 40.40 3.08
318 319 8.843885 AAAGAAGAAGTGTACCTTTACATACC 57.156 34.615 0.00 0.00 40.40 2.73
319 320 9.708092 AGAAAGAAGAAGTGTACCTTTACATAC 57.292 33.333 0.00 0.00 40.40 2.39
359 360 8.499492 CGATTGCGAGCTAAGAAAATATCTTGC 61.499 40.741 1.10 3.53 43.66 4.01
360 361 6.789403 CGATTGCGAGCTAAGAAAATATCTTG 59.211 38.462 1.10 0.00 43.66 3.02
361 362 6.564873 GCGATTGCGAGCTAAGAAAATATCTT 60.565 38.462 0.00 0.00 44.98 2.40
362 363 5.107298 GCGATTGCGAGCTAAGAAAATATCT 60.107 40.000 0.00 0.00 39.13 1.98
363 364 5.076106 GCGATTGCGAGCTAAGAAAATATC 58.924 41.667 0.00 0.00 40.82 1.63
364 365 5.023551 GCGATTGCGAGCTAAGAAAATAT 57.976 39.130 0.00 0.00 40.82 1.28
365 366 4.452890 GCGATTGCGAGCTAAGAAAATA 57.547 40.909 0.00 0.00 40.82 1.40
366 367 3.325230 GCGATTGCGAGCTAAGAAAAT 57.675 42.857 0.00 0.00 40.82 1.82
367 368 2.806288 GCGATTGCGAGCTAAGAAAA 57.194 45.000 0.00 0.00 40.82 2.29
379 380 3.059166 AGTTTGATTGGTTTGCGATTGC 58.941 40.909 0.00 0.00 43.20 3.56
380 381 4.549458 AGAGTTTGATTGGTTTGCGATTG 58.451 39.130 0.00 0.00 0.00 2.67
381 382 4.853924 AGAGTTTGATTGGTTTGCGATT 57.146 36.364 0.00 0.00 0.00 3.34
382 383 5.003804 ACTAGAGTTTGATTGGTTTGCGAT 58.996 37.500 0.00 0.00 0.00 4.58
383 384 4.385825 ACTAGAGTTTGATTGGTTTGCGA 58.614 39.130 0.00 0.00 0.00 5.10
384 385 4.666655 CGACTAGAGTTTGATTGGTTTGCG 60.667 45.833 0.00 0.00 0.00 4.85
385 386 4.712763 CGACTAGAGTTTGATTGGTTTGC 58.287 43.478 0.00 0.00 0.00 3.68
386 387 4.213270 TGCGACTAGAGTTTGATTGGTTTG 59.787 41.667 0.00 0.00 0.00 2.93
387 388 4.385825 TGCGACTAGAGTTTGATTGGTTT 58.614 39.130 0.00 0.00 0.00 3.27
388 389 4.002906 TGCGACTAGAGTTTGATTGGTT 57.997 40.909 0.00 0.00 0.00 3.67
389 390 3.678056 TGCGACTAGAGTTTGATTGGT 57.322 42.857 0.00 0.00 0.00 3.67
390 391 4.142816 CCTTTGCGACTAGAGTTTGATTGG 60.143 45.833 0.00 0.00 0.00 3.16
391 392 4.690748 TCCTTTGCGACTAGAGTTTGATTG 59.309 41.667 0.00 0.00 0.00 2.67
392 393 4.894784 TCCTTTGCGACTAGAGTTTGATT 58.105 39.130 0.00 0.00 0.00 2.57
393 394 4.537135 TCCTTTGCGACTAGAGTTTGAT 57.463 40.909 0.00 0.00 0.00 2.57
394 395 4.056050 GTTCCTTTGCGACTAGAGTTTGA 58.944 43.478 0.00 0.00 0.00 2.69
395 396 3.186613 GGTTCCTTTGCGACTAGAGTTTG 59.813 47.826 0.00 0.00 0.00 2.93
396 397 3.400255 GGTTCCTTTGCGACTAGAGTTT 58.600 45.455 0.00 0.00 0.00 2.66
397 398 2.609737 CGGTTCCTTTGCGACTAGAGTT 60.610 50.000 0.00 0.00 0.00 3.01
398 399 1.067776 CGGTTCCTTTGCGACTAGAGT 60.068 52.381 0.00 0.00 0.00 3.24
399 400 1.630148 CGGTTCCTTTGCGACTAGAG 58.370 55.000 0.00 0.00 0.00 2.43
400 401 0.245539 CCGGTTCCTTTGCGACTAGA 59.754 55.000 0.00 0.00 0.00 2.43
401 402 0.245539 TCCGGTTCCTTTGCGACTAG 59.754 55.000 0.00 0.00 0.00 2.57
402 403 0.245539 CTCCGGTTCCTTTGCGACTA 59.754 55.000 0.00 0.00 0.00 2.59
403 404 1.004918 CTCCGGTTCCTTTGCGACT 60.005 57.895 0.00 0.00 0.00 4.18
404 405 2.677979 GCTCCGGTTCCTTTGCGAC 61.678 63.158 0.00 0.00 0.00 5.19
405 406 2.358247 GCTCCGGTTCCTTTGCGA 60.358 61.111 0.00 0.00 0.00 5.10
406 407 3.431725 GGCTCCGGTTCCTTTGCG 61.432 66.667 0.00 0.00 0.00 4.85
407 408 1.250840 ATTGGCTCCGGTTCCTTTGC 61.251 55.000 0.00 0.00 0.00 3.68
408 409 1.067635 CAATTGGCTCCGGTTCCTTTG 60.068 52.381 0.00 8.58 0.00 2.77
409 410 1.256812 CAATTGGCTCCGGTTCCTTT 58.743 50.000 0.00 0.01 0.00 3.11
410 411 1.250840 GCAATTGGCTCCGGTTCCTT 61.251 55.000 7.72 0.00 40.25 3.36
411 412 1.678970 GCAATTGGCTCCGGTTCCT 60.679 57.895 7.72 0.00 40.25 3.36
412 413 2.885113 GCAATTGGCTCCGGTTCC 59.115 61.111 7.72 4.38 40.25 3.62
422 423 2.270297 CTTCCCGCCGAAGCAATTGG 62.270 60.000 7.72 0.00 41.61 3.16
423 424 1.137404 CTTCCCGCCGAAGCAATTG 59.863 57.895 0.00 0.00 41.61 2.32
424 425 2.046285 CCTTCCCGCCGAAGCAATT 61.046 57.895 5.24 0.00 45.83 2.32
425 426 2.438434 CCTTCCCGCCGAAGCAAT 60.438 61.111 5.24 0.00 45.83 3.56
438 439 3.332493 TACCGTGCTCGTCGCCTTC 62.332 63.158 7.47 0.00 38.05 3.46
439 440 3.338126 CTACCGTGCTCGTCGCCTT 62.338 63.158 7.47 0.00 38.05 4.35
440 441 3.812019 CTACCGTGCTCGTCGCCT 61.812 66.667 7.47 0.00 38.05 5.52
441 442 3.807538 TCTACCGTGCTCGTCGCC 61.808 66.667 7.47 0.00 38.05 5.54
442 443 2.576317 GTCTACCGTGCTCGTCGC 60.576 66.667 7.47 0.00 39.77 5.19
443 444 0.179171 ATTGTCTACCGTGCTCGTCG 60.179 55.000 7.47 0.00 35.01 5.12
444 445 1.546834 GATTGTCTACCGTGCTCGTC 58.453 55.000 7.47 0.00 35.01 4.20
445 446 0.172803 GGATTGTCTACCGTGCTCGT 59.827 55.000 7.47 0.00 35.01 4.18
446 447 0.172578 TGGATTGTCTACCGTGCTCG 59.827 55.000 0.14 0.14 0.00 5.03
447 448 2.101582 AGATGGATTGTCTACCGTGCTC 59.898 50.000 0.00 0.00 0.00 4.26
448 449 2.111384 AGATGGATTGTCTACCGTGCT 58.889 47.619 0.00 0.00 0.00 4.40
449 450 2.604046 AGATGGATTGTCTACCGTGC 57.396 50.000 0.00 0.00 0.00 5.34
450 451 3.198068 CCAAGATGGATTGTCTACCGTG 58.802 50.000 0.00 0.00 40.96 4.94
451 452 2.420129 GCCAAGATGGATTGTCTACCGT 60.420 50.000 0.00 0.00 40.96 4.83
452 453 2.213499 GCCAAGATGGATTGTCTACCG 58.787 52.381 0.00 0.00 40.96 4.02
453 454 2.092429 TGGCCAAGATGGATTGTCTACC 60.092 50.000 0.61 0.00 40.96 3.18
454 455 2.945668 GTGGCCAAGATGGATTGTCTAC 59.054 50.000 7.24 0.00 40.96 2.59
455 456 2.092429 GGTGGCCAAGATGGATTGTCTA 60.092 50.000 7.24 0.00 40.96 2.59
456 457 1.341383 GGTGGCCAAGATGGATTGTCT 60.341 52.381 7.24 0.00 40.96 3.41
457 458 1.106285 GGTGGCCAAGATGGATTGTC 58.894 55.000 7.24 0.00 40.96 3.18
458 459 0.409092 TGGTGGCCAAGATGGATTGT 59.591 50.000 7.24 0.00 40.96 2.71
459 460 1.684983 GATGGTGGCCAAGATGGATTG 59.315 52.381 7.24 0.00 40.96 2.67
460 461 1.412074 GGATGGTGGCCAAGATGGATT 60.412 52.381 7.24 0.00 40.96 3.01
461 462 0.186873 GGATGGTGGCCAAGATGGAT 59.813 55.000 7.24 0.00 40.96 3.41
462 463 1.614711 GGATGGTGGCCAAGATGGA 59.385 57.895 7.24 0.00 40.96 3.41
463 464 1.825191 CGGATGGTGGCCAAGATGG 60.825 63.158 7.24 0.00 41.55 3.51
464 465 1.077501 ACGGATGGTGGCCAAGATG 60.078 57.895 7.24 0.00 36.95 2.90
465 466 1.224592 GACGGATGGTGGCCAAGAT 59.775 57.895 7.24 1.10 36.95 2.40
466 467 2.668632 GACGGATGGTGGCCAAGA 59.331 61.111 7.24 0.00 36.95 3.02
467 468 2.438434 GGACGGATGGTGGCCAAG 60.438 66.667 7.24 0.00 36.95 3.61
468 469 4.402528 CGGACGGATGGTGGCCAA 62.403 66.667 7.24 0.00 36.95 4.52
470 471 4.404098 AACGGACGGATGGTGGCC 62.404 66.667 0.00 0.00 0.00 5.36
471 472 2.818274 GAACGGACGGATGGTGGC 60.818 66.667 0.00 0.00 0.00 5.01
472 473 2.508439 CGAACGGACGGATGGTGG 60.508 66.667 0.00 0.00 0.00 4.61
473 474 1.804326 GACGAACGGACGGATGGTG 60.804 63.158 8.20 0.00 37.61 4.17
474 475 2.570181 GACGAACGGACGGATGGT 59.430 61.111 8.20 0.00 37.61 3.55
475 476 2.202703 GGACGAACGGACGGATGG 60.203 66.667 8.20 0.00 37.61 3.51
476 477 0.870307 GATGGACGAACGGACGGATG 60.870 60.000 8.20 0.00 37.61 3.51
477 478 1.436336 GATGGACGAACGGACGGAT 59.564 57.895 8.20 0.00 37.61 4.18
478 479 2.703798 GGATGGACGAACGGACGGA 61.704 63.158 8.20 0.00 37.61 4.69
479 480 2.202703 GGATGGACGAACGGACGG 60.203 66.667 8.20 0.00 37.61 4.79
480 481 1.516386 CAGGATGGACGAACGGACG 60.516 63.158 0.00 2.26 39.31 4.79
481 482 1.810030 GCAGGATGGACGAACGGAC 60.810 63.158 0.00 0.00 35.86 4.79
482 483 1.945354 GAGCAGGATGGACGAACGGA 61.945 60.000 0.00 0.00 35.86 4.69
483 484 1.519455 GAGCAGGATGGACGAACGG 60.519 63.158 0.00 0.00 35.86 4.44
484 485 1.519455 GGAGCAGGATGGACGAACG 60.519 63.158 0.00 0.00 35.86 3.95
485 486 0.179000 ATGGAGCAGGATGGACGAAC 59.821 55.000 0.00 0.00 35.86 3.95
486 487 0.178767 CATGGAGCAGGATGGACGAA 59.821 55.000 0.00 0.00 35.86 3.85
487 488 1.689243 CCATGGAGCAGGATGGACGA 61.689 60.000 5.56 0.00 41.63 4.20
488 489 1.227764 CCATGGAGCAGGATGGACG 60.228 63.158 5.56 0.00 41.63 4.79
489 490 0.548031 TTCCATGGAGCAGGATGGAC 59.452 55.000 15.53 0.00 46.33 4.02
490 491 1.297968 TTTCCATGGAGCAGGATGGA 58.702 50.000 15.53 6.51 45.27 3.41
491 492 2.148446 TTTTCCATGGAGCAGGATGG 57.852 50.000 15.53 0.00 40.61 3.51
520 521 2.379972 CTAATCCGTGAGACCTGGTCT 58.620 52.381 28.70 28.70 46.42 3.85
521 522 1.202428 GCTAATCCGTGAGACCTGGTC 60.202 57.143 19.20 19.20 0.00 4.02
522 523 0.824759 GCTAATCCGTGAGACCTGGT 59.175 55.000 0.00 0.00 0.00 4.00
523 524 0.824109 TGCTAATCCGTGAGACCTGG 59.176 55.000 0.00 0.00 0.00 4.45
524 525 2.546795 GGATGCTAATCCGTGAGACCTG 60.547 54.545 0.00 0.00 43.12 4.00
525 526 1.689273 GGATGCTAATCCGTGAGACCT 59.311 52.381 0.00 0.00 43.12 3.85
526 527 2.156343 GGATGCTAATCCGTGAGACC 57.844 55.000 0.00 0.00 43.12 3.85
544 545 1.091771 GCCACGTGTCATCCATCAGG 61.092 60.000 15.65 0.00 0.00 3.86
545 546 0.391528 TGCCACGTGTCATCCATCAG 60.392 55.000 15.65 0.00 0.00 2.90
546 547 0.252761 ATGCCACGTGTCATCCATCA 59.747 50.000 15.65 0.00 0.00 3.07
547 548 1.331756 GAATGCCACGTGTCATCCATC 59.668 52.381 13.12 3.25 0.00 3.51
548 549 1.382522 GAATGCCACGTGTCATCCAT 58.617 50.000 13.12 0.00 0.00 3.41
549 550 1.018752 CGAATGCCACGTGTCATCCA 61.019 55.000 13.12 2.78 0.00 3.41
550 551 1.715585 CGAATGCCACGTGTCATCC 59.284 57.895 13.12 0.00 0.00 3.51
551 552 1.060937 GCGAATGCCACGTGTCATC 59.939 57.895 13.12 5.83 33.98 2.92
552 553 1.233950 TTGCGAATGCCACGTGTCAT 61.234 50.000 15.65 11.07 41.78 3.06
553 554 1.440145 TTTGCGAATGCCACGTGTCA 61.440 50.000 15.65 8.63 41.78 3.58
554 555 0.109781 ATTTGCGAATGCCACGTGTC 60.110 50.000 15.65 0.98 41.78 3.67
555 556 0.109781 GATTTGCGAATGCCACGTGT 60.110 50.000 15.65 0.00 41.78 4.49
556 557 0.109827 TGATTTGCGAATGCCACGTG 60.110 50.000 9.08 9.08 41.78 4.49
557 558 0.109781 GTGATTTGCGAATGCCACGT 60.110 50.000 3.20 0.00 41.78 4.49
558 559 0.109827 TGTGATTTGCGAATGCCACG 60.110 50.000 3.20 0.00 41.78 4.94
559 560 2.063156 TTGTGATTTGCGAATGCCAC 57.937 45.000 3.20 7.66 41.78 5.01
560 561 2.674954 CTTTGTGATTTGCGAATGCCA 58.325 42.857 3.20 0.00 41.78 4.92
561 562 1.391144 GCTTTGTGATTTGCGAATGCC 59.609 47.619 3.20 0.00 41.78 4.40
562 563 2.060284 TGCTTTGTGATTTGCGAATGC 58.940 42.857 3.20 0.59 43.20 3.56
563 564 5.744819 TCATATGCTTTGTGATTTGCGAATG 59.255 36.000 3.20 0.00 0.00 2.67
564 565 5.893687 TCATATGCTTTGTGATTTGCGAAT 58.106 33.333 0.00 0.00 0.00 3.34
565 566 5.123661 TCTCATATGCTTTGTGATTTGCGAA 59.876 36.000 0.00 0.00 0.00 4.70
566 567 4.635324 TCTCATATGCTTTGTGATTTGCGA 59.365 37.500 0.00 0.00 0.00 5.10
567 568 4.731961 GTCTCATATGCTTTGTGATTTGCG 59.268 41.667 0.00 0.00 0.00 4.85
568 569 5.039333 GGTCTCATATGCTTTGTGATTTGC 58.961 41.667 0.00 0.00 0.00 3.68
569 570 6.263344 CAGGTCTCATATGCTTTGTGATTTG 58.737 40.000 0.00 0.00 0.00 2.32
570 571 5.359009 CCAGGTCTCATATGCTTTGTGATTT 59.641 40.000 0.00 0.00 0.00 2.17
571 572 4.885907 CCAGGTCTCATATGCTTTGTGATT 59.114 41.667 0.00 0.00 0.00 2.57
572 573 4.080129 ACCAGGTCTCATATGCTTTGTGAT 60.080 41.667 0.00 0.00 0.00 3.06
573 574 3.264193 ACCAGGTCTCATATGCTTTGTGA 59.736 43.478 0.00 0.00 0.00 3.58
574 575 3.614092 ACCAGGTCTCATATGCTTTGTG 58.386 45.455 0.00 0.00 0.00 3.33
575 576 3.521126 AGACCAGGTCTCATATGCTTTGT 59.479 43.478 17.31 0.00 38.71 2.83
576 577 4.148128 AGACCAGGTCTCATATGCTTTG 57.852 45.455 17.31 0.00 38.71 2.77
588 589 9.793259 TGGAAATAAATTATATGAGACCAGGTC 57.207 33.333 12.25 12.25 0.00 3.85
602 603 8.203485 GCCTTGATGGTTCATGGAAATAAATTA 58.797 33.333 10.99 0.00 45.66 1.40
603 604 7.049754 GCCTTGATGGTTCATGGAAATAAATT 58.950 34.615 10.99 0.00 45.66 1.82
604 605 6.585416 GCCTTGATGGTTCATGGAAATAAAT 58.415 36.000 10.99 0.00 45.66 1.40
605 606 5.394005 CGCCTTGATGGTTCATGGAAATAAA 60.394 40.000 10.99 0.00 45.66 1.40
606 607 4.097741 CGCCTTGATGGTTCATGGAAATAA 59.902 41.667 10.99 0.00 45.66 1.40
607 608 3.631686 CGCCTTGATGGTTCATGGAAATA 59.368 43.478 10.99 0.00 45.66 1.40
608 609 2.428171 CGCCTTGATGGTTCATGGAAAT 59.572 45.455 10.99 0.00 45.66 2.17
609 610 1.818060 CGCCTTGATGGTTCATGGAAA 59.182 47.619 10.99 0.00 45.66 3.13
610 611 1.462616 CGCCTTGATGGTTCATGGAA 58.537 50.000 10.99 0.00 45.66 3.53
611 612 0.394216 CCGCCTTGATGGTTCATGGA 60.394 55.000 10.99 0.00 45.66 3.41
612 613 1.386525 CCCGCCTTGATGGTTCATGG 61.387 60.000 0.00 4.08 45.60 3.66
613 614 0.680921 ACCCGCCTTGATGGTTCATG 60.681 55.000 0.00 0.00 38.35 3.07
614 615 0.394352 GACCCGCCTTGATGGTTCAT 60.394 55.000 0.00 0.00 38.35 2.57
615 616 1.002624 GACCCGCCTTGATGGTTCA 60.003 57.895 0.00 0.00 38.35 3.18
616 617 0.744771 GAGACCCGCCTTGATGGTTC 60.745 60.000 0.00 0.00 38.35 3.62
617 618 1.299976 GAGACCCGCCTTGATGGTT 59.700 57.895 0.00 0.00 38.35 3.67
618 619 1.918293 TGAGACCCGCCTTGATGGT 60.918 57.895 0.00 0.00 38.35 3.55
619 620 1.450312 GTGAGACCCGCCTTGATGG 60.450 63.158 0.00 0.00 39.35 3.51
620 621 1.450312 GGTGAGACCCGCCTTGATG 60.450 63.158 0.00 0.00 42.19 3.07
621 622 2.990479 GGTGAGACCCGCCTTGAT 59.010 61.111 0.00 0.00 42.19 2.57
626 627 0.539986 TAAATCAGGTGAGACCCGCC 59.460 55.000 0.00 0.00 45.81 6.13
627 628 1.480954 TCTAAATCAGGTGAGACCCGC 59.519 52.381 0.00 0.00 39.75 6.13
628 629 3.384789 TCATCTAAATCAGGTGAGACCCG 59.615 47.826 0.00 0.00 39.59 5.28
634 635 4.406972 CCAGGTCTCATCTAAATCAGGTGA 59.593 45.833 0.00 0.00 42.35 4.02
635 636 4.163078 ACCAGGTCTCATCTAAATCAGGTG 59.837 45.833 0.00 0.00 36.64 4.00
636 637 4.366267 ACCAGGTCTCATCTAAATCAGGT 58.634 43.478 0.00 0.00 0.00 4.00
637 638 4.653341 AGACCAGGTCTCATCTAAATCAGG 59.347 45.833 17.31 0.00 38.71 3.86
638 639 5.867903 AGACCAGGTCTCATCTAAATCAG 57.132 43.478 17.31 0.00 38.71 2.90
671 672 7.901029 TGCTTATAACCATGGTTCATGAAAAA 58.099 30.769 33.06 14.00 43.81 1.94
672 673 7.473735 TGCTTATAACCATGGTTCATGAAAA 57.526 32.000 33.06 14.78 43.81 2.29
673 674 7.473735 TTGCTTATAACCATGGTTCATGAAA 57.526 32.000 33.06 20.08 43.81 2.69
674 675 7.473735 TTTGCTTATAACCATGGTTCATGAA 57.526 32.000 33.06 19.86 43.81 2.57
675 676 7.473735 TTTTGCTTATAACCATGGTTCATGA 57.526 32.000 33.06 16.72 43.81 3.07
716 717 1.080435 GGTACGCGACAGGCTTTACC 61.080 60.000 15.93 7.94 39.40 2.85
751 753 9.185680 GTGTTTGGTTCCTTGGTTAGATATAAT 57.814 33.333 0.00 0.00 0.00 1.28
752 754 7.334921 CGTGTTTGGTTCCTTGGTTAGATATAA 59.665 37.037 0.00 0.00 0.00 0.98
754 756 5.646360 CGTGTTTGGTTCCTTGGTTAGATAT 59.354 40.000 0.00 0.00 0.00 1.63
756 758 3.818773 CGTGTTTGGTTCCTTGGTTAGAT 59.181 43.478 0.00 0.00 0.00 1.98
757 759 3.207778 CGTGTTTGGTTCCTTGGTTAGA 58.792 45.455 0.00 0.00 0.00 2.10
758 760 2.287368 GCGTGTTTGGTTCCTTGGTTAG 60.287 50.000 0.00 0.00 0.00 2.34
759 761 1.677052 GCGTGTTTGGTTCCTTGGTTA 59.323 47.619 0.00 0.00 0.00 2.85
760 762 0.458260 GCGTGTTTGGTTCCTTGGTT 59.542 50.000 0.00 0.00 0.00 3.67
761 763 0.395173 AGCGTGTTTGGTTCCTTGGT 60.395 50.000 0.00 0.00 0.00 3.67
762 764 0.030638 CAGCGTGTTTGGTTCCTTGG 59.969 55.000 0.00 0.00 0.00 3.61
763 765 0.030638 CCAGCGTGTTTGGTTCCTTG 59.969 55.000 0.00 0.00 0.00 3.61
764 766 1.734388 GCCAGCGTGTTTGGTTCCTT 61.734 55.000 0.00 0.00 38.02 3.36
765 767 2.193536 GCCAGCGTGTTTGGTTCCT 61.194 57.895 0.00 0.00 38.02 3.36
795 797 4.948004 GTCTTTTATAAAGGGGGTGTGAGG 59.052 45.833 7.41 0.00 0.00 3.86
803 805 5.977821 AGAGGAGGTCTTTTATAAAGGGG 57.022 43.478 7.41 0.00 27.07 4.79
832 834 2.242196 GAGATTTGGGAGGGTTGATGGA 59.758 50.000 0.00 0.00 0.00 3.41
834 836 3.285484 CTGAGATTTGGGAGGGTTGATG 58.715 50.000 0.00 0.00 0.00 3.07
835 837 2.357569 GCTGAGATTTGGGAGGGTTGAT 60.358 50.000 0.00 0.00 0.00 2.57
836 838 1.004745 GCTGAGATTTGGGAGGGTTGA 59.995 52.381 0.00 0.00 0.00 3.18
841 843 1.741732 CGTGAGCTGAGATTTGGGAGG 60.742 57.143 0.00 0.00 0.00 4.30
843 845 3.840831 CGTGAGCTGAGATTTGGGA 57.159 52.632 0.00 0.00 0.00 4.37
860 864 1.121240 CTAAGTCGTGCGATTAGGCG 58.879 55.000 0.00 0.00 35.06 5.52
868 872 6.138236 CGTTTAATACTCTACTAAGTCGTGCG 59.862 42.308 0.00 0.00 0.00 5.34
878 882 2.223900 GGGCGGCGTTTAATACTCTACT 60.224 50.000 9.37 0.00 0.00 2.57
882 886 0.528249 TCGGGCGGCGTTTAATACTC 60.528 55.000 9.37 0.00 0.00 2.59
883 887 0.529119 CTCGGGCGGCGTTTAATACT 60.529 55.000 9.37 0.00 0.00 2.12
884 888 1.929376 CTCGGGCGGCGTTTAATAC 59.071 57.895 9.37 0.00 0.00 1.89
885 889 1.884004 GCTCGGGCGGCGTTTAATA 60.884 57.895 9.37 0.00 0.00 0.98
886 890 3.199891 GCTCGGGCGGCGTTTAAT 61.200 61.111 9.37 0.00 0.00 1.40
948 962 3.861797 CGGTTCCCCTCCGGATGG 61.862 72.222 18.32 18.32 41.63 3.51
954 968 3.400054 CACCTCCGGTTCCCCTCC 61.400 72.222 0.00 0.00 31.02 4.30
955 969 3.400054 CCACCTCCGGTTCCCCTC 61.400 72.222 0.00 0.00 31.02 4.30
964 978 2.385091 CGTTTTACCGCCACCTCCG 61.385 63.158 0.00 0.00 0.00 4.63
965 979 3.569902 CGTTTTACCGCCACCTCC 58.430 61.111 0.00 0.00 0.00 4.30
973 987 1.683790 CGAGCTCCTGCGTTTTACCG 61.684 60.000 8.47 0.00 45.42 4.02
976 990 1.740296 GCCGAGCTCCTGCGTTTTA 60.740 57.895 8.47 0.00 45.42 1.52
1044 1076 1.450312 CTCCATCTCGCCCCACAAC 60.450 63.158 0.00 0.00 0.00 3.32
1045 1077 1.612146 TCTCCATCTCGCCCCACAA 60.612 57.895 0.00 0.00 0.00 3.33
1046 1078 2.038813 TCTCCATCTCGCCCCACA 59.961 61.111 0.00 0.00 0.00 4.17
1281 1313 1.153667 GAGGCAGAGCGTGAGGAAG 60.154 63.158 0.00 0.00 0.00 3.46
1697 1729 2.391469 CTGAATTCCTCCAGCTGCG 58.609 57.895 8.66 1.56 0.00 5.18
1704 1736 1.821332 CCTGGCGCTGAATTCCTCC 60.821 63.158 7.64 0.00 0.00 4.30
1705 1737 0.392998 TTCCTGGCGCTGAATTCCTC 60.393 55.000 7.64 0.00 0.00 3.71
1896 1928 0.969149 TGAGACTGCATCAACGAGGT 59.031 50.000 0.00 0.00 0.00 3.85
1900 1932 2.350804 CCAAGATGAGACTGCATCAACG 59.649 50.000 13.77 0.00 45.52 4.10
1901 1933 3.126514 CACCAAGATGAGACTGCATCAAC 59.873 47.826 13.77 0.00 45.52 3.18
1908 1940 1.354040 GCGACACCAAGATGAGACTG 58.646 55.000 0.00 0.00 0.00 3.51
1938 1982 5.940192 AGTGTTTCAAATACGCATCAAGA 57.060 34.783 0.00 0.00 0.00 3.02
1987 2031 9.755064 ACGTCATTATTCTCTTCAAATAAAACG 57.245 29.630 16.64 16.64 41.48 3.60
2025 2069 3.318839 CCATGACAGTCCACACACAAAAT 59.681 43.478 0.00 0.00 0.00 1.82
2028 2076 1.476652 CCCATGACAGTCCACACACAA 60.477 52.381 0.00 0.00 0.00 3.33
2036 2084 1.524621 CCATCGCCCATGACAGTCC 60.525 63.158 0.00 0.00 33.80 3.85
2039 2087 1.524621 GACCCATCGCCCATGACAG 60.525 63.158 0.00 0.00 33.80 3.51
2044 2092 0.625849 AGAAAAGACCCATCGCCCAT 59.374 50.000 0.00 0.00 0.00 4.00
2047 2095 3.660501 AAAAAGAAAAGACCCATCGCC 57.339 42.857 0.00 0.00 0.00 5.54
2065 2113 2.223317 CCATCGCTCATGATTCGCAAAA 60.223 45.455 11.33 0.00 33.80 2.44
2066 2114 1.331447 CCATCGCTCATGATTCGCAAA 59.669 47.619 11.33 0.00 33.80 3.68
2067 2115 0.939419 CCATCGCTCATGATTCGCAA 59.061 50.000 11.33 0.00 33.80 4.85
2068 2116 0.881600 CCCATCGCTCATGATTCGCA 60.882 55.000 11.33 3.53 33.80 5.10
2069 2117 0.882042 ACCCATCGCTCATGATTCGC 60.882 55.000 11.33 4.32 33.80 4.70
2070 2118 1.143305 GACCCATCGCTCATGATTCG 58.857 55.000 10.24 10.24 33.80 3.34
2071 2119 2.540265 AGACCCATCGCTCATGATTC 57.460 50.000 0.00 0.00 33.80 2.52
2072 2120 2.804572 CGAAGACCCATCGCTCATGATT 60.805 50.000 0.00 0.00 33.80 2.57
2073 2121 1.269988 CGAAGACCCATCGCTCATGAT 60.270 52.381 0.00 0.00 33.80 2.45
2074 2122 0.103026 CGAAGACCCATCGCTCATGA 59.897 55.000 0.00 0.00 33.80 3.07
2075 2123 2.598045 CGAAGACCCATCGCTCATG 58.402 57.895 0.00 0.00 33.07 3.07
2081 2129 1.227089 CCTGAGCGAAGACCCATCG 60.227 63.158 0.00 0.00 42.99 3.84
2082 2130 0.537188 TTCCTGAGCGAAGACCCATC 59.463 55.000 0.00 0.00 0.00 3.51
2083 2131 0.539051 CTTCCTGAGCGAAGACCCAT 59.461 55.000 5.16 0.00 41.57 4.00
2084 2132 1.544825 CCTTCCTGAGCGAAGACCCA 61.545 60.000 10.86 0.00 41.57 4.51
2085 2133 1.219393 CCTTCCTGAGCGAAGACCC 59.781 63.158 10.86 0.00 41.57 4.46
2086 2134 0.608640 TTCCTTCCTGAGCGAAGACC 59.391 55.000 10.86 0.00 41.57 3.85
2087 2135 2.682155 ATTCCTTCCTGAGCGAAGAC 57.318 50.000 10.86 0.00 41.57 3.01
2088 2136 3.703001 AAATTCCTTCCTGAGCGAAGA 57.297 42.857 10.86 0.00 41.57 2.87
2089 2137 3.307242 CGTAAATTCCTTCCTGAGCGAAG 59.693 47.826 4.37 4.37 39.22 3.79
2090 2138 3.259064 CGTAAATTCCTTCCTGAGCGAA 58.741 45.455 0.00 0.00 0.00 4.70
2091 2139 2.232941 ACGTAAATTCCTTCCTGAGCGA 59.767 45.455 0.00 0.00 0.00 4.93
2092 2140 2.348666 CACGTAAATTCCTTCCTGAGCG 59.651 50.000 0.00 0.00 0.00 5.03
2093 2141 3.125316 CACACGTAAATTCCTTCCTGAGC 59.875 47.826 0.00 0.00 0.00 4.26
2094 2142 4.315803 ACACACGTAAATTCCTTCCTGAG 58.684 43.478 0.00 0.00 0.00 3.35
2095 2143 4.345859 ACACACGTAAATTCCTTCCTGA 57.654 40.909 0.00 0.00 0.00 3.86
2096 2144 4.992319 TGTACACACGTAAATTCCTTCCTG 59.008 41.667 0.00 0.00 0.00 3.86
2127 2175 6.648725 AGGAAGTATCTATTACGTACCGAGAC 59.351 42.308 0.00 0.00 35.84 3.36
2128 2176 6.763355 AGGAAGTATCTATTACGTACCGAGA 58.237 40.000 0.00 0.00 35.84 4.04
2129 2177 6.091986 GGAGGAAGTATCTATTACGTACCGAG 59.908 46.154 0.00 0.00 35.84 4.63
2130 2178 5.934625 GGAGGAAGTATCTATTACGTACCGA 59.065 44.000 0.00 0.00 35.84 4.69
2131 2179 5.163913 CGGAGGAAGTATCTATTACGTACCG 60.164 48.000 0.00 0.00 35.84 4.02
2132 2180 5.703130 ACGGAGGAAGTATCTATTACGTACC 59.297 44.000 0.00 0.00 35.84 3.34
2133 2181 6.793492 ACGGAGGAAGTATCTATTACGTAC 57.207 41.667 0.00 0.00 35.84 3.67
2134 2182 6.992123 TGAACGGAGGAAGTATCTATTACGTA 59.008 38.462 0.00 0.00 35.84 3.57
2135 2183 5.824624 TGAACGGAGGAAGTATCTATTACGT 59.175 40.000 0.00 0.00 35.84 3.57
2136 2184 6.309712 TGAACGGAGGAAGTATCTATTACG 57.690 41.667 0.00 0.00 35.84 3.18
2137 2185 8.937634 TTTTGAACGGAGGAAGTATCTATTAC 57.062 34.615 0.00 0.00 0.00 1.89
2236 2284 9.173021 TGTTTTGAGTATTTCGACATGGATTAT 57.827 29.630 0.00 0.00 0.00 1.28
2237 2285 8.554835 TGTTTTGAGTATTTCGACATGGATTA 57.445 30.769 0.00 0.00 0.00 1.75
2238 2286 7.447374 TGTTTTGAGTATTTCGACATGGATT 57.553 32.000 0.00 0.00 0.00 3.01
2239 2287 7.630242 ATGTTTTGAGTATTTCGACATGGAT 57.370 32.000 0.00 0.00 30.29 3.41
2240 2288 8.731275 ATATGTTTTGAGTATTTCGACATGGA 57.269 30.769 0.00 0.00 32.36 3.41
2241 2289 9.787532 AAATATGTTTTGAGTATTTCGACATGG 57.212 29.630 0.00 0.00 32.36 3.66
2259 2307 8.846211 CCCTCCGTTCACAAATATAAATATGTT 58.154 33.333 0.00 0.00 0.00 2.71
2260 2308 7.447238 CCCCTCCGTTCACAAATATAAATATGT 59.553 37.037 0.00 0.00 0.00 2.29
2261 2309 7.094377 CCCCCTCCGTTCACAAATATAAATATG 60.094 40.741 0.00 0.00 0.00 1.78
2262 2310 6.946009 CCCCCTCCGTTCACAAATATAAATAT 59.054 38.462 0.00 0.00 0.00 1.28
2263 2311 6.126420 ACCCCCTCCGTTCACAAATATAAATA 60.126 38.462 0.00 0.00 0.00 1.40
2264 2312 5.137551 CCCCCTCCGTTCACAAATATAAAT 58.862 41.667 0.00 0.00 0.00 1.40
2265 2313 4.018233 ACCCCCTCCGTTCACAAATATAAA 60.018 41.667 0.00 0.00 0.00 1.40
2266 2314 3.524380 ACCCCCTCCGTTCACAAATATAA 59.476 43.478 0.00 0.00 0.00 0.98
2267 2315 3.116959 ACCCCCTCCGTTCACAAATATA 58.883 45.455 0.00 0.00 0.00 0.86
2268 2316 1.920351 ACCCCCTCCGTTCACAAATAT 59.080 47.619 0.00 0.00 0.00 1.28
2269 2317 1.364269 ACCCCCTCCGTTCACAAATA 58.636 50.000 0.00 0.00 0.00 1.40
2270 2318 1.364269 TACCCCCTCCGTTCACAAAT 58.636 50.000 0.00 0.00 0.00 2.32
2271 2319 1.364269 ATACCCCCTCCGTTCACAAA 58.636 50.000 0.00 0.00 0.00 2.83
2272 2320 1.364269 AATACCCCCTCCGTTCACAA 58.636 50.000 0.00 0.00 0.00 3.33
2273 2321 1.364269 AAATACCCCCTCCGTTCACA 58.636 50.000 0.00 0.00 0.00 3.58
2274 2322 2.502142 AAAATACCCCCTCCGTTCAC 57.498 50.000 0.00 0.00 0.00 3.18
2333 2381 5.759273 ACTGTGTTTACGTGGCTTGTAATTA 59.241 36.000 0.00 0.00 32.28 1.40
2355 2403 6.153680 CCTATCTTTTCAGTCCTGTAGTGACT 59.846 42.308 0.00 0.00 43.70 3.41
2357 2405 6.253758 TCCTATCTTTTCAGTCCTGTAGTGA 58.746 40.000 0.00 0.00 35.67 3.41
2360 2408 9.921637 GATTATCCTATCTTTTCAGTCCTGTAG 57.078 37.037 0.00 0.00 0.00 2.74
2402 2451 0.965866 TTCGTCGAGAGGGACATGCT 60.966 55.000 0.00 0.00 36.73 3.79
2405 2454 1.835494 TTCTTCGTCGAGAGGGACAT 58.165 50.000 0.00 0.00 36.73 3.06
2416 2465 4.680110 TGATCTGTCTCGTTTTTCTTCGTC 59.320 41.667 0.00 0.00 0.00 4.20
2419 2468 4.991687 AGGTGATCTGTCTCGTTTTTCTTC 59.008 41.667 0.00 0.00 0.00 2.87
2428 2477 2.159310 GGTGAAGAGGTGATCTGTCTCG 60.159 54.545 0.00 0.00 38.67 4.04
2460 2509 0.107508 CTGATCAACCATGGAGCCGT 60.108 55.000 21.47 0.00 0.00 5.68
2470 2519 2.035961 TCCGTATAGCTGCTGATCAACC 59.964 50.000 13.43 0.00 0.00 3.77
2485 2534 2.134789 ACTACCTTGTCGGTCCGTAT 57.865 50.000 11.88 0.00 44.93 3.06
2514 2563 9.381033 TGATTCTTTCAACAACAATGATTTTGT 57.619 25.926 0.00 1.66 37.55 2.83
2520 2569 6.513230 CGGTCTGATTCTTTCAACAACAATGA 60.513 38.462 0.00 0.00 32.78 2.57
2546 2595 2.933287 TCCGGGGACATGTTGCCT 60.933 61.111 0.00 0.00 35.51 4.75
2572 2621 2.503765 TGGGTGTCAGTTCTGAAGTTCA 59.496 45.455 5.25 5.25 0.00 3.18
2623 2673 1.607801 GGTTGGAGGCTGGCATTTCC 61.608 60.000 3.38 2.34 0.00 3.13
2627 2677 2.036256 GTGGTTGGAGGCTGGCAT 59.964 61.111 3.38 0.00 0.00 4.40
2630 2680 1.903404 GTTGGTGGTTGGAGGCTGG 60.903 63.158 0.00 0.00 0.00 4.85
2645 2695 1.337074 GGTGCATCATGTGTTGGGTTG 60.337 52.381 0.00 0.00 0.00 3.77
2657 2707 0.694771 AGCTGGAAGAAGGTGCATCA 59.305 50.000 0.00 0.00 34.07 3.07
2666 2716 1.371183 CGGGTGACAGCTGGAAGAA 59.629 57.895 19.93 0.00 34.07 2.52
2694 2744 1.287815 CGGGAGTACACGCAGACAA 59.712 57.895 8.03 0.00 35.74 3.18
2711 2761 3.488090 GCGAGGTTTCTTCGCCCG 61.488 66.667 13.65 0.00 45.77 6.13
2718 2768 0.326264 AATGGAGCAGCGAGGTTTCT 59.674 50.000 0.00 0.00 0.00 2.52
2719 2769 0.449388 CAATGGAGCAGCGAGGTTTC 59.551 55.000 0.00 0.00 0.00 2.78
2727 2777 1.436336 GATGCCACAATGGAGCAGC 59.564 57.895 0.00 2.81 40.96 5.25
2737 2787 1.293179 CACTGTCTCCGATGCCACA 59.707 57.895 0.00 0.00 0.00 4.17
2753 2803 2.988684 TCCCCATTGTTGCGGCAC 60.989 61.111 0.05 0.00 0.00 5.01
2761 2811 2.092212 CCTTCTGCTATGTCCCCATTGT 60.092 50.000 0.00 0.00 32.29 2.71
2765 2815 1.008327 TCTCCTTCTGCTATGTCCCCA 59.992 52.381 0.00 0.00 0.00 4.96
2773 2823 1.038130 GCGGGTCTCTCCTTCTGCTA 61.038 60.000 0.00 0.00 36.25 3.49
2802 2868 1.449601 GTTCATGGATGGCGTCGGT 60.450 57.895 0.00 0.00 0.00 4.69
2808 2874 2.351726 GACGTTAGTGTTCATGGATGGC 59.648 50.000 0.00 0.00 0.00 4.40
2855 2921 1.493950 CTCGGACTTGATGGCATCGC 61.494 60.000 21.65 11.11 0.00 4.58



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.