Multiple sequence alignment - TraesCS5A01G376700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G376700 chr5A 100.000 5150 0 0 864 6013 574343896 574349045 0.000000e+00 9511
1 TraesCS5A01G376700 chr5A 97.350 2302 53 3 1535 3828 599765595 599767896 0.000000e+00 3906
2 TraesCS5A01G376700 chr5A 100.000 596 0 0 1 596 574343033 574343628 0.000000e+00 1101
3 TraesCS5A01G376700 chr5A 96.000 575 15 4 975 1541 599763996 599764570 0.000000e+00 928
4 TraesCS5A01G376700 chr5A 76.169 449 35 31 5302 5701 574392975 574393400 2.880000e-38 171
5 TraesCS5A01G376700 chr5D 89.602 3491 219 61 2262 5701 456610350 456606953 0.000000e+00 4303
6 TraesCS5A01G376700 chr5D 88.904 757 52 15 982 1727 456611719 456610984 0.000000e+00 904
7 TraesCS5A01G376700 chr5D 88.433 536 25 11 1729 2264 456610929 456610431 3.980000e-171 612
8 TraesCS5A01G376700 chr5D 81.431 517 50 25 31 523 456612641 456612147 1.220000e-101 381
9 TraesCS5A01G376700 chr5D 94.393 107 6 0 5907 6013 374250235 374250129 1.340000e-36 165
10 TraesCS5A01G376700 chr5D 79.412 238 17 20 5479 5695 456603217 456602991 8.130000e-29 139
11 TraesCS5A01G376700 chr5D 90.526 95 8 1 5794 5888 273597964 273598057 2.280000e-24 124
12 TraesCS5A01G376700 chr5B 92.215 1824 119 12 872 2687 558346523 558344715 0.000000e+00 2560
13 TraesCS5A01G376700 chr5B 86.355 2228 148 67 3568 5701 558343255 558341090 0.000000e+00 2287
14 TraesCS5A01G376700 chr5B 95.357 840 36 3 2676 3514 558344091 558343254 0.000000e+00 1332
15 TraesCS5A01G376700 chr5B 79.714 419 26 18 188 577 558347197 558346809 1.290000e-61 248
16 TraesCS5A01G376700 chr5B 95.283 106 5 0 5907 6012 377829934 377829829 1.040000e-37 169
17 TraesCS5A01G376700 chr5B 94.393 107 6 0 5907 6013 225526554 225526448 1.340000e-36 165
18 TraesCS5A01G376700 chr5B 84.821 112 7 6 5583 5694 558331580 558331479 2.960000e-18 104
19 TraesCS5A01G376700 chr7B 98.131 107 2 0 5907 6013 88304890 88304784 2.860000e-43 187
20 TraesCS5A01G376700 chr7B 92.632 95 6 1 5795 5888 313052793 313052699 1.050000e-27 135
21 TraesCS5A01G376700 chr7B 92.391 92 6 1 5796 5887 275202889 275202799 4.890000e-26 130
22 TraesCS5A01G376700 chr6D 97.196 107 3 0 5907 6013 328979995 328980101 1.330000e-41 182
23 TraesCS5A01G376700 chr6D 91.753 97 6 2 5795 5891 193466647 193466553 3.780000e-27 134
24 TraesCS5A01G376700 chr6D 92.473 93 6 1 5796 5888 309794137 309794046 1.360000e-26 132
25 TraesCS5A01G376700 chr2A 97.170 106 3 0 5907 6012 114847371 114847476 4.790000e-41 180
26 TraesCS5A01G376700 chr6A 96.190 105 4 0 5907 6011 445279240 445279344 8.010000e-39 172
27 TraesCS5A01G376700 chr6A 95.327 107 5 0 5907 6013 574726082 574725976 2.880000e-38 171
28 TraesCS5A01G376700 chr6A 91.667 96 6 1 5793 5888 445279083 445279176 1.360000e-26 132
29 TraesCS5A01G376700 chr6A 90.722 97 7 2 5792 5888 574726233 574726139 1.760000e-25 128
30 TraesCS5A01G376700 chr6B 95.327 107 5 0 5907 6013 641150058 641149952 2.880000e-38 171
31 TraesCS5A01G376700 chr4A 93.478 92 5 1 5797 5888 139017672 139017582 1.050000e-27 135
32 TraesCS5A01G376700 chr7D 91.398 93 7 1 5796 5888 325333931 325333840 6.330000e-25 126


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G376700 chr5A 574343033 574349045 6012 False 5306.00 9511 100.00000 1 6013 2 chr5A.!!$F2 6012
1 TraesCS5A01G376700 chr5A 599763996 599767896 3900 False 2417.00 3906 96.67500 975 3828 2 chr5A.!!$F3 2853
2 TraesCS5A01G376700 chr5D 456602991 456612641 9650 True 1267.80 4303 85.55640 31 5701 5 chr5D.!!$R2 5670
3 TraesCS5A01G376700 chr5B 558341090 558347197 6107 True 1606.75 2560 88.41025 188 5701 4 chr5B.!!$R4 5513

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
157 167 0.178964 AAACCTCACCACCCACCATG 60.179 55.000 0.00 0.00 0.00 3.66 F
262 293 0.390472 CCTTGGAGTCTCGGACTTGC 60.390 60.000 7.80 0.00 43.53 4.01 F
1727 2864 1.214424 ACTGGGCGCCTTAAACCATAT 59.786 47.619 28.56 2.82 31.62 1.78 F
2433 3708 0.677731 TCATCTGCTTTCCGGCCTTG 60.678 55.000 0.00 0.00 0.00 3.61 F
4334 6254 0.825425 TGCCACGCCATTTTCCTTCA 60.825 50.000 0.00 0.00 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1727 2864 0.665835 ATCGCACTTTGCCGAACAAA 59.334 45.000 3.96 3.96 46.01 2.83 R
1729 2866 1.573932 CATCGCACTTTGCCGAACA 59.426 52.632 0.00 0.00 41.12 3.18 R
3413 5330 1.213926 AGGACAGGATTGATGGAAGCC 59.786 52.381 0.00 0.00 40.82 4.35 R
4388 6309 0.109597 GCCGCAAATTCTGTCCACAG 60.110 55.000 0.00 0.00 45.08 3.66 R
5971 11957 0.033090 GAGAGAAACGTCCGGGTGTT 59.967 55.000 0.00 3.68 0.00 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 1.686052 ACCAGAGATCTGAGGATTCGC 59.314 52.381 15.20 0.00 46.59 4.70
42 43 1.336440 AGAGATCTGAGGATTCGCGTG 59.664 52.381 5.77 0.00 31.46 5.34
51 52 0.317436 GGATTCGCGTGTGTGCAAAA 60.317 50.000 5.77 0.00 34.15 2.44
52 53 0.770008 GATTCGCGTGTGTGCAAAAC 59.230 50.000 5.77 0.00 34.15 2.43
53 54 0.593773 ATTCGCGTGTGTGCAAAACC 60.594 50.000 5.77 0.00 34.15 3.27
54 55 2.904747 TTCGCGTGTGTGCAAAACCG 62.905 55.000 5.77 0.00 34.15 4.44
55 56 2.405594 GCGTGTGTGCAAAACCGA 59.594 55.556 12.63 0.00 34.15 4.69
57 58 1.298041 CGTGTGTGCAAAACCGACC 60.298 57.895 0.00 0.00 0.00 4.79
58 59 1.803943 GTGTGTGCAAAACCGACCA 59.196 52.632 0.00 0.00 0.00 4.02
60 61 0.393132 TGTGTGCAAAACCGACCAGA 60.393 50.000 0.00 0.00 0.00 3.86
61 62 0.307760 GTGTGCAAAACCGACCAGAG 59.692 55.000 0.00 0.00 0.00 3.35
62 63 0.179234 TGTGCAAAACCGACCAGAGA 59.821 50.000 0.00 0.00 0.00 3.10
63 64 0.868406 GTGCAAAACCGACCAGAGAG 59.132 55.000 0.00 0.00 0.00 3.20
84 85 0.529992 AAAATCTCGATCCGACGGCC 60.530 55.000 9.66 2.30 0.00 6.13
86 87 2.351336 AATCTCGATCCGACGGCCAC 62.351 60.000 9.66 1.84 0.00 5.01
87 88 3.822192 CTCGATCCGACGGCCACA 61.822 66.667 9.66 0.00 0.00 4.17
90 91 2.736682 CGATCCGACGGCCACAAAC 61.737 63.158 9.66 0.00 0.00 2.93
93 94 3.411351 CCGACGGCCACAAACGAG 61.411 66.667 2.24 0.00 0.00 4.18
110 111 1.305201 GAGCGGTTGACCAAGAAACA 58.695 50.000 0.51 0.00 35.14 2.83
117 118 3.813724 GGTTGACCAAGAAACAGAGTACC 59.186 47.826 0.00 0.00 35.64 3.34
118 119 3.764237 TGACCAAGAAACAGAGTACCC 57.236 47.619 0.00 0.00 0.00 3.69
123 124 3.055312 CCAAGAAACAGAGTACCCCTACC 60.055 52.174 0.00 0.00 0.00 3.18
142 152 4.123497 ACCAGCTTTTCAAGTTGAAACC 57.877 40.909 26.72 20.39 45.03 3.27
144 154 4.142160 ACCAGCTTTTCAAGTTGAAACCTC 60.142 41.667 26.72 18.52 45.03 3.85
149 159 4.712122 TTTCAAGTTGAAACCTCACCAC 57.288 40.909 23.91 0.00 41.02 4.16
157 167 0.178964 AAACCTCACCACCCACCATG 60.179 55.000 0.00 0.00 0.00 3.66
168 184 3.129502 CACCATGCCGTGAGCCTG 61.130 66.667 0.00 0.00 42.71 4.85
240 271 3.485216 GGGACGCATTTGAACATTCTACG 60.485 47.826 0.00 0.00 0.00 3.51
241 272 3.124636 GGACGCATTTGAACATTCTACGT 59.875 43.478 0.00 0.00 0.00 3.57
242 273 4.327898 GGACGCATTTGAACATTCTACGTA 59.672 41.667 0.00 0.00 0.00 3.57
243 274 5.199424 ACGCATTTGAACATTCTACGTAC 57.801 39.130 0.00 0.00 0.00 3.67
244 275 4.092383 ACGCATTTGAACATTCTACGTACC 59.908 41.667 0.00 0.00 0.00 3.34
254 285 4.398673 ACATTCTACGTACCTTGGAGTCTC 59.601 45.833 0.00 0.00 0.00 3.36
262 293 0.390472 CCTTGGAGTCTCGGACTTGC 60.390 60.000 7.80 0.00 43.53 4.01
299 330 2.945008 GCAGCACAGTAAGCATATTCCA 59.055 45.455 0.00 0.00 0.00 3.53
335 369 4.717629 CGCAACCGACGAGCCAGA 62.718 66.667 0.00 0.00 36.29 3.86
336 370 2.357034 GCAACCGACGAGCCAGAA 60.357 61.111 0.00 0.00 0.00 3.02
337 371 2.383527 GCAACCGACGAGCCAGAAG 61.384 63.158 0.00 0.00 0.00 2.85
338 372 1.738099 CAACCGACGAGCCAGAAGG 60.738 63.158 0.00 0.00 38.23 3.46
396 431 4.225497 GCCAGTGGCCACAGTATC 57.775 61.111 36.39 16.81 44.06 2.24
451 486 2.526046 CCCCCTTCGTCAACACCCT 61.526 63.158 0.00 0.00 0.00 4.34
588 644 1.779061 TTCCGCAGCCTTCCTTCCTT 61.779 55.000 0.00 0.00 0.00 3.36
594 650 2.087646 CAGCCTTCCTTCCTTGTTAGC 58.912 52.381 0.00 0.00 0.00 3.09
892 959 3.437795 CTCCGCCTTGCTGCCAAG 61.438 66.667 0.00 1.09 46.38 3.61
911 978 2.032681 AGGCGGTTCTTGGCTCAC 59.967 61.111 0.00 0.00 37.80 3.51
950 1017 4.263209 TTTGCCAGTTGCCACGCG 62.263 61.111 3.53 3.53 40.16 6.01
1160 1243 1.521010 CAGCCTCGACATCCAGCTG 60.521 63.158 6.78 6.78 44.31 4.24
1350 1436 2.582052 ACCTCAATCGGCTGAAAAACA 58.418 42.857 0.00 0.00 0.00 2.83
1389 1478 8.857216 GCTTGATTGTTCTTTATATATGCATGC 58.143 33.333 11.82 11.82 0.00 4.06
1412 1509 5.188751 GCTCCTATGCCCTCTTATGTATTCT 59.811 44.000 0.00 0.00 0.00 2.40
1512 1616 5.002468 CGTATTTATTCACACAAAGCAAGCG 59.998 40.000 0.00 0.00 0.00 4.68
1634 2771 2.445145 TCCCCAATGTTTCAGAACCTCA 59.555 45.455 0.00 0.00 34.80 3.86
1660 2797 7.750947 ATAGGTACAGGTTTTGAGATTAGGT 57.249 36.000 0.00 0.00 0.00 3.08
1700 2837 3.430453 TGCTCTTTTAAACCCATCCCAG 58.570 45.455 0.00 0.00 0.00 4.45
1702 2839 3.193479 GCTCTTTTAAACCCATCCCAGTG 59.807 47.826 0.00 0.00 0.00 3.66
1705 2842 2.891191 TTAAACCCATCCCAGTGTCC 57.109 50.000 0.00 0.00 0.00 4.02
1727 2864 1.214424 ACTGGGCGCCTTAAACCATAT 59.786 47.619 28.56 2.82 31.62 1.78
1729 2866 2.693074 CTGGGCGCCTTAAACCATATTT 59.307 45.455 28.56 0.00 31.62 1.40
1730 2867 2.428890 TGGGCGCCTTAAACCATATTTG 59.571 45.455 28.56 0.00 0.00 2.32
1731 2868 2.429250 GGGCGCCTTAAACCATATTTGT 59.571 45.455 28.56 0.00 0.00 2.83
1734 2871 3.789224 GCGCCTTAAACCATATTTGTTCG 59.211 43.478 0.00 0.00 0.00 3.95
1748 2938 1.797537 GTTCGGCAAAGTGCGATGC 60.798 57.895 0.00 0.00 46.21 3.91
1776 2966 3.250040 AGTTTGACAGTTATTCGTGTGCC 59.750 43.478 0.00 0.00 0.00 5.01
1819 3009 9.453572 TTGAACTTCATGATAACTCTTTATGCT 57.546 29.630 0.00 0.00 0.00 3.79
1873 3065 1.202031 GCCCGCGTGTTTTTATCAGAG 60.202 52.381 4.92 0.00 0.00 3.35
1876 3068 2.222508 CCGCGTGTTTTTATCAGAGACG 60.223 50.000 4.92 0.00 0.00 4.18
1945 3137 7.936584 TGTTTATGTTCTTTTCTTGTACCCAG 58.063 34.615 0.00 0.00 0.00 4.45
2433 3708 0.677731 TCATCTGCTTTCCGGCCTTG 60.678 55.000 0.00 0.00 0.00 3.61
2462 3737 1.281577 TGTGTGCCCAGATTGATGCTA 59.718 47.619 0.00 0.00 0.00 3.49
2974 4890 6.371548 TGTTCCATTGAGCACTTCAGTTATAC 59.628 38.462 0.00 0.00 37.07 1.47
3413 5330 8.469309 AGGGTGAATATTTCCAATCATACTTG 57.531 34.615 11.10 0.00 0.00 3.16
3580 5497 6.854496 TTACTCAAATACATGCCGTAATCC 57.146 37.500 0.00 0.00 32.59 3.01
3869 5786 7.703328 TGAATCGAAAAAGTAATAATCTGGCC 58.297 34.615 0.00 0.00 0.00 5.36
3874 5793 6.459710 CGAAAAAGTAATAATCTGGCCTTCCC 60.460 42.308 3.32 0.00 0.00 3.97
4071 5990 4.349930 GCCCCAGAGGTATTTATTGGACTA 59.650 45.833 0.00 0.00 38.26 2.59
4073 5992 6.467339 GCCCCAGAGGTATTTATTGGACTAAT 60.467 42.308 0.00 0.00 38.26 1.73
4078 5997 8.097662 CAGAGGTATTTATTGGACTAATCCCTC 58.902 40.741 0.00 0.00 45.59 4.30
4087 6006 9.901172 TTATTGGACTAATCCCTCTTAAGTTTC 57.099 33.333 1.63 0.00 45.59 2.78
4094 6013 9.335211 ACTAATCCCTCTTAAGTTTCTTCCTTA 57.665 33.333 1.63 0.00 0.00 2.69
4109 6029 7.745620 TTCTTCCTTAAGAAAATGGTGTCTC 57.254 36.000 3.36 0.00 46.32 3.36
4123 6043 7.617041 AATGGTGTCTCACTTAAAATAGAGC 57.383 36.000 0.06 0.00 34.40 4.09
4127 6047 6.874134 GGTGTCTCACTTAAAATAGAGCTTCA 59.126 38.462 0.00 0.00 34.40 3.02
4149 6069 6.623486 TCATGTTCTTCCTTGTATGCATTTG 58.377 36.000 3.54 0.00 0.00 2.32
4200 6120 7.425606 ACAGGAAATGTGATGTTTACAGTTTC 58.574 34.615 0.00 0.00 41.91 2.78
4206 6126 4.083537 TGTGATGTTTACAGTTTCGGCATC 60.084 41.667 0.00 0.00 33.84 3.91
4278 6198 1.674221 GCCGATGTCTCTTCTGCTGTT 60.674 52.381 0.00 0.00 0.00 3.16
4310 6230 5.243283 AGGTTTGTCGTGTGTTCTAGATACT 59.757 40.000 0.00 0.00 0.00 2.12
4320 6240 3.954904 TGTTCTAGATACTCTCCTGCCAC 59.045 47.826 0.00 0.00 0.00 5.01
4334 6254 0.825425 TGCCACGCCATTTTCCTTCA 60.825 50.000 0.00 0.00 0.00 3.02
4351 6271 9.865152 TTTTCCTTCATTGTATCATATGATCCA 57.135 29.630 21.42 14.00 36.05 3.41
4377 6298 7.011773 CGCAGAGCACATACATCAAATATAAC 58.988 38.462 0.00 0.00 0.00 1.89
4378 6299 7.095481 CGCAGAGCACATACATCAAATATAACT 60.095 37.037 0.00 0.00 0.00 2.24
4388 6309 7.932120 ACATCAAATATAACTACTGCTCGTC 57.068 36.000 0.00 0.00 0.00 4.20
4421 6342 4.910585 CGGCCAGACATACCCCGC 62.911 72.222 2.24 0.00 31.87 6.13
4466 6387 3.315191 ACATTATGCGTAAATGCTGGGAC 59.685 43.478 1.76 0.00 37.77 4.46
4472 6393 1.129811 CGTAAATGCTGGGACGGAAAC 59.870 52.381 0.00 0.00 36.31 2.78
4478 6399 1.003718 CTGGGACGGAAACCCTGAC 60.004 63.158 0.00 0.00 46.82 3.51
4481 6402 0.179012 GGGACGGAAACCCTGACAAA 60.179 55.000 0.00 0.00 43.65 2.83
4487 6408 2.125202 GAAACCCTGACAAACGCCCG 62.125 60.000 0.00 0.00 0.00 6.13
4496 6417 0.472471 ACAAACGCCCGGATATGGAT 59.528 50.000 0.73 0.00 0.00 3.41
4621 6542 3.254060 CGTAGATACTTTGCACAGCACT 58.746 45.455 0.00 0.00 38.71 4.40
4652 6573 1.425428 GCTATGTGTTGCCACTCGC 59.575 57.895 0.00 0.00 42.34 5.03
4694 6616 3.793144 CTTCCCGCTGTCGCTTGC 61.793 66.667 0.00 0.00 0.00 4.01
4794 6719 0.659427 CACTGTGGTCAGCACACTTG 59.341 55.000 5.32 2.45 44.77 3.16
4862 6797 8.402798 ACTATAACTGAGATCACACATAGAGG 57.597 38.462 13.78 0.00 0.00 3.69
4863 6798 8.001875 ACTATAACTGAGATCACACATAGAGGT 58.998 37.037 13.78 0.00 0.00 3.85
4864 6799 5.590530 AACTGAGATCACACATAGAGGTC 57.409 43.478 0.00 0.00 0.00 3.85
4865 6800 4.865905 ACTGAGATCACACATAGAGGTCT 58.134 43.478 0.00 0.00 0.00 3.85
4866 6801 4.887071 ACTGAGATCACACATAGAGGTCTC 59.113 45.833 0.00 0.00 33.15 3.36
4867 6802 5.122707 TGAGATCACACATAGAGGTCTCT 57.877 43.478 5.76 5.76 43.40 3.10
4868 6803 5.129634 TGAGATCACACATAGAGGTCTCTC 58.870 45.833 3.49 0.00 40.93 3.20
4918 6854 0.454957 CTTCCTGCGTTCATTTGGCG 60.455 55.000 0.00 0.00 0.00 5.69
4924 6860 4.049640 GTTCATTTGGCGGCGGCA 62.050 61.111 33.02 33.02 42.47 5.69
4925 6861 4.049640 TTCATTTGGCGGCGGCAC 62.050 61.111 36.31 4.78 42.47 5.01
4979 6919 9.998106 AAACCTTTCTCGCTGTGTATATTATAT 57.002 29.630 0.00 0.00 0.00 0.86
5039 6979 7.768582 AGTGCATAAATATACTTGTGTACAGCA 59.231 33.333 12.70 0.00 36.13 4.41
5047 6987 2.482721 ACTTGTGTACAGCATTTACGGC 59.517 45.455 0.00 0.00 0.00 5.68
5062 7002 1.227999 ACGGCACATTCACTGGTTCG 61.228 55.000 0.00 0.00 0.00 3.95
5074 7014 0.320771 CTGGTTCGGGACTTGAGGTG 60.321 60.000 0.00 0.00 0.00 4.00
5082 7022 3.146066 CGGGACTTGAGGTGATTTTGAA 58.854 45.455 0.00 0.00 0.00 2.69
5088 7028 6.405842 GGACTTGAGGTGATTTTGAAACAAGT 60.406 38.462 0.00 0.00 45.56 3.16
5100 7040 2.094286 TGAAACAAGTTGGTGCTGGTTG 60.094 45.455 7.96 0.00 33.27 3.77
5141 7081 2.412770 GCCTTTTCAAATGAATGTGGCG 59.587 45.455 14.29 0.00 35.79 5.69
5144 7084 0.109365 TTCAAATGAATGTGGCGCCG 60.109 50.000 23.90 2.71 0.00 6.46
5145 7085 1.516821 CAAATGAATGTGGCGCCGG 60.517 57.895 23.90 0.00 0.00 6.13
5146 7086 3.355203 AAATGAATGTGGCGCCGGC 62.355 57.895 23.90 19.07 38.90 6.13
5147 7087 4.802051 ATGAATGTGGCGCCGGCT 62.802 61.111 26.68 2.51 39.81 5.52
5159 7099 1.766143 CGCCGGCTGAGCTGAATTAC 61.766 60.000 26.68 0.00 37.02 1.89
5177 7117 4.459390 TTACTACCGTAGCAAGCAATGA 57.541 40.909 5.42 0.00 0.00 2.57
5180 7120 1.442769 ACCGTAGCAAGCAATGACAG 58.557 50.000 0.00 0.00 0.00 3.51
5185 7125 0.538977 AGCAAGCAATGACAGTGCCT 60.539 50.000 23.20 8.83 43.27 4.75
5188 7128 2.153645 CAAGCAATGACAGTGCCTGTA 58.846 47.619 23.20 0.00 45.44 2.74
5189 7129 2.553602 CAAGCAATGACAGTGCCTGTAA 59.446 45.455 23.20 1.84 45.44 2.41
5190 7130 3.077484 AGCAATGACAGTGCCTGTAAT 57.923 42.857 23.20 1.66 45.44 1.89
5218 7175 9.958180 ATGTTTATTTAAGGGAAAAAGGAATGG 57.042 29.630 0.00 0.00 0.00 3.16
5219 7176 9.160412 TGTTTATTTAAGGGAAAAAGGAATGGA 57.840 29.630 0.00 0.00 0.00 3.41
5229 7186 4.640771 AAAAGGAATGGAGCTGACTGTA 57.359 40.909 0.00 0.00 0.00 2.74
5232 7189 4.148128 AGGAATGGAGCTGACTGTAATG 57.852 45.455 0.00 0.00 0.00 1.90
5235 7192 4.702131 GGAATGGAGCTGACTGTAATGTTT 59.298 41.667 0.00 0.00 0.00 2.83
5236 7193 5.880332 GGAATGGAGCTGACTGTAATGTTTA 59.120 40.000 0.00 0.00 0.00 2.01
5237 7194 6.037610 GGAATGGAGCTGACTGTAATGTTTAG 59.962 42.308 0.00 0.00 0.00 1.85
5240 7197 6.999950 TGGAGCTGACTGTAATGTTTAGTAA 58.000 36.000 0.00 0.00 0.00 2.24
5243 7200 8.780249 GGAGCTGACTGTAATGTTTAGTAAAAA 58.220 33.333 0.00 0.00 0.00 1.94
5279 7252 1.626356 CCGGGTGATGGGATCAGTGT 61.626 60.000 0.00 0.00 40.53 3.55
5284 7257 3.034635 GGTGATGGGATCAGTGTCTAGT 58.965 50.000 0.00 0.00 40.53 2.57
5306 7280 5.919141 AGTGTCTACTAGTACTTTGTTTGCG 59.081 40.000 0.00 0.00 34.74 4.85
5308 7282 5.916883 TGTCTACTAGTACTTTGTTTGCGTC 59.083 40.000 0.00 0.00 0.00 5.19
5309 7283 5.058977 GTCTACTAGTACTTTGTTTGCGTCG 59.941 44.000 0.00 0.00 0.00 5.12
5310 7284 2.473984 ACTAGTACTTTGTTTGCGTCGC 59.526 45.455 11.10 11.10 0.00 5.19
5311 7285 0.231279 AGTACTTTGTTTGCGTCGCG 59.769 50.000 13.38 0.00 0.00 5.87
5332 11011 2.812011 GGAATGAGTTTAGTGGTTGCGT 59.188 45.455 0.00 0.00 0.00 5.24
5419 11113 4.720902 CTGTGGGTGGCGCCATCA 62.721 66.667 38.80 31.31 39.65 3.07
5420 11114 4.045781 TGTGGGTGGCGCCATCAT 62.046 61.111 38.80 0.00 39.65 2.45
5428 11122 1.466167 GTGGCGCCATCATATCATGTC 59.534 52.381 35.23 11.31 0.00 3.06
5452 11146 4.080863 GTGACTGGGAGATGAGGTTTGTAT 60.081 45.833 0.00 0.00 0.00 2.29
5453 11147 4.536090 TGACTGGGAGATGAGGTTTGTATT 59.464 41.667 0.00 0.00 0.00 1.89
5454 11148 4.848357 ACTGGGAGATGAGGTTTGTATTG 58.152 43.478 0.00 0.00 0.00 1.90
5455 11149 4.202441 CTGGGAGATGAGGTTTGTATTGG 58.798 47.826 0.00 0.00 0.00 3.16
5456 11150 3.849574 TGGGAGATGAGGTTTGTATTGGA 59.150 43.478 0.00 0.00 0.00 3.53
5457 11151 4.080356 TGGGAGATGAGGTTTGTATTGGAG 60.080 45.833 0.00 0.00 0.00 3.86
5458 11152 4.080299 GGGAGATGAGGTTTGTATTGGAGT 60.080 45.833 0.00 0.00 0.00 3.85
5459 11153 5.130477 GGGAGATGAGGTTTGTATTGGAGTA 59.870 44.000 0.00 0.00 0.00 2.59
5475 11169 3.263425 TGGAGTAGAACCAAAAGCTAGGG 59.737 47.826 4.97 1.22 34.25 3.53
5481 11175 2.834638 ACCAAAAGCTAGGGCATGAT 57.165 45.000 0.00 0.00 41.70 2.45
5482 11176 2.381911 ACCAAAAGCTAGGGCATGATG 58.618 47.619 0.00 0.00 41.70 3.07
5483 11177 1.684983 CCAAAAGCTAGGGCATGATGG 59.315 52.381 0.00 0.00 41.70 3.51
5484 11178 1.684983 CAAAAGCTAGGGCATGATGGG 59.315 52.381 0.00 0.00 41.70 4.00
5486 11180 1.453633 AAGCTAGGGCATGATGGGAT 58.546 50.000 0.00 0.00 41.70 3.85
5487 11181 0.697079 AGCTAGGGCATGATGGGATG 59.303 55.000 0.00 0.00 41.70 3.51
5488 11182 0.323178 GCTAGGGCATGATGGGATGG 60.323 60.000 0.00 0.00 38.54 3.51
5489 11183 0.323178 CTAGGGCATGATGGGATGGC 60.323 60.000 0.00 0.00 45.81 4.40
5490 11184 0.773305 TAGGGCATGATGGGATGGCT 60.773 55.000 0.00 0.00 45.81 4.75
5491 11185 1.605738 GGGCATGATGGGATGGCTC 60.606 63.158 0.00 0.00 45.81 4.70
5492 11186 1.605738 GGCATGATGGGATGGCTCC 60.606 63.158 0.00 0.00 43.76 4.70
5494 11188 0.608582 GCATGATGGGATGGCTCCTC 60.609 60.000 0.00 0.00 41.74 3.71
5496 11190 1.144298 CATGATGGGATGGCTCCTCAA 59.856 52.381 0.00 0.00 41.74 3.02
5497 11191 1.526315 TGATGGGATGGCTCCTCAAT 58.474 50.000 3.54 0.00 41.74 2.57
5498 11192 1.422781 TGATGGGATGGCTCCTCAATC 59.577 52.381 3.54 5.48 41.74 2.67
5502 11467 1.135094 GGATGGCTCCTCAATCCTCA 58.865 55.000 0.00 0.00 38.65 3.86
5544 11509 3.795638 GGCTCATCCGTTTCGTCC 58.204 61.111 0.00 0.00 0.00 4.79
5547 11512 1.134907 GGCTCATCCGTTTCGTCCTAA 60.135 52.381 0.00 0.00 0.00 2.69
5562 11527 2.303311 GTCCTAAACTGGTGGAGCTCTT 59.697 50.000 14.64 0.18 0.00 2.85
5574 11539 2.336088 GCTCTTTGCGCAAAGCCA 59.664 55.556 43.55 31.69 45.48 4.75
5576 11541 1.280206 GCTCTTTGCGCAAAGCCAAG 61.280 55.000 43.55 36.75 46.49 3.61
5578 11543 1.106351 TCTTTGCGCAAAGCCAAGGA 61.106 50.000 43.55 29.49 45.53 3.36
5581 11546 3.936653 GCGCAAAGCCAAGGAAAC 58.063 55.556 0.30 0.00 40.81 2.78
5604 11590 1.003839 GTGGTGCGATTGGACTGGA 60.004 57.895 4.43 0.00 36.55 3.86
5611 11597 1.514087 GATTGGACTGGACGCCGTA 59.486 57.895 0.00 0.00 0.00 4.02
5612 11598 0.804933 GATTGGACTGGACGCCGTAC 60.805 60.000 0.00 0.00 0.00 3.67
5625 11611 2.108514 CCGTACGTCCTAGTCGCCA 61.109 63.158 15.21 0.00 0.00 5.69
5636 11622 2.808543 CCTAGTCGCCATATTTCCTTGC 59.191 50.000 0.00 0.00 0.00 4.01
5643 11629 1.318576 CATATTTCCTTGCCCCGTCC 58.681 55.000 0.00 0.00 0.00 4.79
5644 11630 0.923358 ATATTTCCTTGCCCCGTCCA 59.077 50.000 0.00 0.00 0.00 4.02
5645 11631 0.923358 TATTTCCTTGCCCCGTCCAT 59.077 50.000 0.00 0.00 0.00 3.41
5646 11632 0.923358 ATTTCCTTGCCCCGTCCATA 59.077 50.000 0.00 0.00 0.00 2.74
5647 11633 0.254747 TTTCCTTGCCCCGTCCATAG 59.745 55.000 0.00 0.00 0.00 2.23
5648 11634 0.619255 TTCCTTGCCCCGTCCATAGA 60.619 55.000 0.00 0.00 0.00 1.98
5649 11635 1.146263 CCTTGCCCCGTCCATAGAC 59.854 63.158 0.00 0.00 39.83 2.59
5650 11636 1.622607 CCTTGCCCCGTCCATAGACA 61.623 60.000 0.00 0.00 43.73 3.41
5651 11637 0.462047 CTTGCCCCGTCCATAGACAC 60.462 60.000 0.00 0.00 43.73 3.67
5652 11638 1.195442 TTGCCCCGTCCATAGACACA 61.195 55.000 0.00 0.00 43.73 3.72
5653 11639 0.980754 TGCCCCGTCCATAGACACAT 60.981 55.000 0.00 0.00 43.73 3.21
5654 11640 0.249911 GCCCCGTCCATAGACACATC 60.250 60.000 0.00 0.00 43.73 3.06
5655 11641 1.119684 CCCCGTCCATAGACACATCA 58.880 55.000 0.00 0.00 43.73 3.07
5656 11642 1.694150 CCCCGTCCATAGACACATCAT 59.306 52.381 0.00 0.00 43.73 2.45
5662 11648 6.404844 CCCGTCCATAGACACATCATATACTC 60.405 46.154 0.00 0.00 43.73 2.59
5695 11681 0.106619 CACGCCCTACTCCTACTCCT 60.107 60.000 0.00 0.00 0.00 3.69
5696 11682 0.106619 ACGCCCTACTCCTACTCCTG 60.107 60.000 0.00 0.00 0.00 3.86
5697 11683 1.457009 CGCCCTACTCCTACTCCTGC 61.457 65.000 0.00 0.00 0.00 4.85
5698 11684 0.105913 GCCCTACTCCTACTCCTGCT 60.106 60.000 0.00 0.00 0.00 4.24
5699 11685 1.989706 CCCTACTCCTACTCCTGCTC 58.010 60.000 0.00 0.00 0.00 4.26
5700 11686 1.479757 CCCTACTCCTACTCCTGCTCC 60.480 61.905 0.00 0.00 0.00 4.70
5701 11687 1.600023 CTACTCCTACTCCTGCTCCG 58.400 60.000 0.00 0.00 0.00 4.63
5702 11688 0.183014 TACTCCTACTCCTGCTCCGG 59.817 60.000 0.00 0.00 0.00 5.14
5703 11689 1.830408 CTCCTACTCCTGCTCCGGG 60.830 68.421 0.00 0.00 0.00 5.73
5704 11690 2.279073 CCTACTCCTGCTCCGGGA 59.721 66.667 0.00 0.00 36.43 5.14
5709 11695 2.445614 TCCTGCTCCGGGAGAAGT 59.554 61.111 26.94 0.00 33.41 3.01
5710 11696 1.984570 TCCTGCTCCGGGAGAAGTG 60.985 63.158 26.94 19.08 33.41 3.16
5711 11697 1.984570 CCTGCTCCGGGAGAAGTGA 60.985 63.158 26.94 5.80 32.36 3.41
5712 11698 1.216710 CTGCTCCGGGAGAAGTGAC 59.783 63.158 27.95 9.07 32.36 3.67
5713 11699 2.182030 GCTCCGGGAGAAGTGACG 59.818 66.667 27.95 0.00 0.00 4.35
5715 11701 3.358076 CTCCGGGAGAAGTGACGGC 62.358 68.421 19.57 0.00 45.58 5.68
5716 11702 4.452733 CCGGGAGAAGTGACGGCC 62.453 72.222 0.00 0.00 39.85 6.13
5717 11703 4.452733 CGGGAGAAGTGACGGCCC 62.453 72.222 0.00 0.00 35.40 5.80
5718 11704 3.003763 GGGAGAAGTGACGGCCCT 61.004 66.667 0.00 0.00 35.86 5.19
5719 11705 2.593956 GGGAGAAGTGACGGCCCTT 61.594 63.158 0.00 0.00 35.86 3.95
5720 11706 1.375326 GGAGAAGTGACGGCCCTTT 59.625 57.895 0.00 0.00 0.00 3.11
5721 11707 0.955919 GGAGAAGTGACGGCCCTTTG 60.956 60.000 0.00 0.00 0.00 2.77
5722 11708 0.250338 GAGAAGTGACGGCCCTTTGT 60.250 55.000 0.00 0.00 0.00 2.83
5723 11709 0.535102 AGAAGTGACGGCCCTTTGTG 60.535 55.000 0.00 0.00 0.00 3.33
5724 11710 2.130073 GAAGTGACGGCCCTTTGTGC 62.130 60.000 0.00 0.00 0.00 4.57
5725 11711 3.670377 GTGACGGCCCTTTGTGCC 61.670 66.667 0.00 0.00 45.70 5.01
5731 11717 4.764143 GCCCTTTGTGCCATACCT 57.236 55.556 0.00 0.00 0.00 3.08
5732 11718 2.493547 GCCCTTTGTGCCATACCTC 58.506 57.895 0.00 0.00 0.00 3.85
5733 11719 0.034089 GCCCTTTGTGCCATACCTCT 60.034 55.000 0.00 0.00 0.00 3.69
5734 11720 2.019156 GCCCTTTGTGCCATACCTCTC 61.019 57.143 0.00 0.00 0.00 3.20
5735 11721 1.408822 CCCTTTGTGCCATACCTCTCC 60.409 57.143 0.00 0.00 0.00 3.71
5736 11722 1.408822 CCTTTGTGCCATACCTCTCCC 60.409 57.143 0.00 0.00 0.00 4.30
5737 11723 1.561542 CTTTGTGCCATACCTCTCCCT 59.438 52.381 0.00 0.00 0.00 4.20
5738 11724 1.204146 TTGTGCCATACCTCTCCCTC 58.796 55.000 0.00 0.00 0.00 4.30
5739 11725 0.339859 TGTGCCATACCTCTCCCTCT 59.660 55.000 0.00 0.00 0.00 3.69
5740 11726 1.044611 GTGCCATACCTCTCCCTCTC 58.955 60.000 0.00 0.00 0.00 3.20
5741 11727 0.105453 TGCCATACCTCTCCCTCTCC 60.105 60.000 0.00 0.00 0.00 3.71
5742 11728 0.105453 GCCATACCTCTCCCTCTCCA 60.105 60.000 0.00 0.00 0.00 3.86
5743 11729 2.008242 CCATACCTCTCCCTCTCCAG 57.992 60.000 0.00 0.00 0.00 3.86
5744 11730 1.219213 CCATACCTCTCCCTCTCCAGT 59.781 57.143 0.00 0.00 0.00 4.00
5745 11731 2.315176 CATACCTCTCCCTCTCCAGTG 58.685 57.143 0.00 0.00 0.00 3.66
5746 11732 1.682478 TACCTCTCCCTCTCCAGTGA 58.318 55.000 0.00 0.00 0.00 3.41
5747 11733 0.787084 ACCTCTCCCTCTCCAGTGAA 59.213 55.000 0.00 0.00 0.00 3.18
5748 11734 1.272985 ACCTCTCCCTCTCCAGTGAAG 60.273 57.143 0.00 0.00 0.00 3.02
5749 11735 1.272985 CCTCTCCCTCTCCAGTGAAGT 60.273 57.143 0.00 0.00 0.00 3.01
5750 11736 1.824230 CTCTCCCTCTCCAGTGAAGTG 59.176 57.143 0.00 0.00 0.00 3.16
5751 11737 1.429299 TCTCCCTCTCCAGTGAAGTGA 59.571 52.381 0.00 0.00 0.00 3.41
5752 11738 1.824230 CTCCCTCTCCAGTGAAGTGAG 59.176 57.143 0.00 0.00 0.00 3.51
5753 11739 0.248843 CCCTCTCCAGTGAAGTGAGC 59.751 60.000 0.00 0.00 0.00 4.26
5754 11740 0.108898 CCTCTCCAGTGAAGTGAGCG 60.109 60.000 0.00 0.00 0.00 5.03
5755 11741 0.735632 CTCTCCAGTGAAGTGAGCGC 60.736 60.000 0.00 0.00 0.00 5.92
5756 11742 1.181741 TCTCCAGTGAAGTGAGCGCT 61.182 55.000 11.27 11.27 0.00 5.92
5757 11743 0.735632 CTCCAGTGAAGTGAGCGCTC 60.736 60.000 30.42 30.42 0.00 5.03
5758 11744 2.091112 CCAGTGAAGTGAGCGCTCG 61.091 63.158 30.75 14.54 0.00 5.03
5759 11745 2.431601 AGTGAAGTGAGCGCTCGC 60.432 61.111 37.36 37.36 40.22 5.03
5760 11746 2.734723 GTGAAGTGAGCGCTCGCA 60.735 61.111 42.35 28.66 44.88 5.10
5761 11747 2.431430 TGAAGTGAGCGCTCGCAG 60.431 61.111 42.35 0.00 44.88 5.18
5762 11748 2.126307 GAAGTGAGCGCTCGCAGA 60.126 61.111 42.35 21.10 44.88 4.26
5763 11749 1.518133 GAAGTGAGCGCTCGCAGAT 60.518 57.895 42.35 30.87 44.88 2.90
5764 11750 1.478622 GAAGTGAGCGCTCGCAGATC 61.479 60.000 42.35 33.03 44.88 2.75
5765 11751 1.943116 AAGTGAGCGCTCGCAGATCT 61.943 55.000 42.35 25.16 44.88 2.75
5766 11752 1.518133 GTGAGCGCTCGCAGATCTT 60.518 57.895 38.61 1.53 44.88 2.40
5767 11753 1.226802 TGAGCGCTCGCAGATCTTC 60.227 57.895 30.75 5.96 44.88 2.87
5768 11754 1.948635 GAGCGCTCGCAGATCTTCC 60.949 63.158 23.61 0.00 44.88 3.46
5769 11755 2.964389 GCGCTCGCAGATCTTCCC 60.964 66.667 9.59 0.00 41.49 3.97
5770 11756 2.279784 CGCTCGCAGATCTTCCCC 60.280 66.667 0.00 0.00 33.89 4.81
5771 11757 2.903357 GCTCGCAGATCTTCCCCA 59.097 61.111 0.00 0.00 33.89 4.96
5772 11758 1.227497 GCTCGCAGATCTTCCCCAG 60.227 63.158 0.00 0.00 33.89 4.45
5773 11759 1.680522 GCTCGCAGATCTTCCCCAGA 61.681 60.000 0.00 0.00 33.89 3.86
5774 11760 0.103937 CTCGCAGATCTTCCCCAGAC 59.896 60.000 0.00 0.00 32.83 3.51
5775 11761 1.227089 CGCAGATCTTCCCCAGACG 60.227 63.158 0.00 0.00 32.83 4.18
5776 11762 1.144936 GCAGATCTTCCCCAGACGG 59.855 63.158 0.00 0.00 32.83 4.79
5777 11763 1.330655 GCAGATCTTCCCCAGACGGA 61.331 60.000 0.00 0.00 32.83 4.69
5778 11764 0.749649 CAGATCTTCCCCAGACGGAG 59.250 60.000 0.00 0.00 32.83 4.63
5790 11776 2.990479 ACGGAGTGGGAATGAGGC 59.010 61.111 0.00 0.00 42.51 4.70
5791 11777 1.918293 ACGGAGTGGGAATGAGGCA 60.918 57.895 0.00 0.00 42.51 4.75
5792 11778 1.274703 ACGGAGTGGGAATGAGGCAT 61.275 55.000 0.00 0.00 42.51 4.40
5793 11779 0.107017 CGGAGTGGGAATGAGGCATT 60.107 55.000 0.00 0.00 36.72 3.56
5794 11780 1.683011 CGGAGTGGGAATGAGGCATTT 60.683 52.381 0.00 0.00 33.90 2.32
5795 11781 2.460669 GGAGTGGGAATGAGGCATTTT 58.539 47.619 0.00 0.00 33.90 1.82
5796 11782 2.833943 GGAGTGGGAATGAGGCATTTTT 59.166 45.455 0.00 0.00 33.90 1.94
5816 11802 4.358494 TTTTTCTTCGAAACGGAAGCAA 57.642 36.364 0.00 0.00 42.48 3.91
5817 11803 4.358494 TTTTCTTCGAAACGGAAGCAAA 57.642 36.364 0.00 0.00 42.48 3.68
5818 11804 4.358494 TTTCTTCGAAACGGAAGCAAAA 57.642 36.364 0.00 0.00 42.48 2.44
5819 11805 3.602390 TCTTCGAAACGGAAGCAAAAG 57.398 42.857 0.00 0.00 42.48 2.27
5820 11806 3.199677 TCTTCGAAACGGAAGCAAAAGA 58.800 40.909 0.00 0.00 42.48 2.52
5821 11807 3.813166 TCTTCGAAACGGAAGCAAAAGAT 59.187 39.130 0.00 0.00 42.48 2.40
5822 11808 4.274950 TCTTCGAAACGGAAGCAAAAGATT 59.725 37.500 0.00 0.00 42.48 2.40
5823 11809 4.561735 TCGAAACGGAAGCAAAAGATTT 57.438 36.364 0.00 0.00 0.00 2.17
5824 11810 4.286910 TCGAAACGGAAGCAAAAGATTTG 58.713 39.130 0.00 0.00 0.00 2.32
5825 11811 3.121362 CGAAACGGAAGCAAAAGATTTGC 60.121 43.478 17.62 17.62 45.22 3.68
5826 11812 2.438868 ACGGAAGCAAAAGATTTGCC 57.561 45.000 20.66 9.17 45.98 4.52
5827 11813 1.963515 ACGGAAGCAAAAGATTTGCCT 59.036 42.857 20.66 10.82 45.98 4.75
5828 11814 2.029918 ACGGAAGCAAAAGATTTGCCTC 60.030 45.455 20.66 17.65 45.98 4.70
5829 11815 2.030007 CGGAAGCAAAAGATTTGCCTCA 60.030 45.455 21.35 0.00 45.98 3.86
5830 11816 3.367703 CGGAAGCAAAAGATTTGCCTCAT 60.368 43.478 21.35 9.54 45.98 2.90
5831 11817 4.179298 GGAAGCAAAAGATTTGCCTCATC 58.821 43.478 21.35 15.34 45.98 2.92
5832 11818 3.881937 AGCAAAAGATTTGCCTCATCC 57.118 42.857 20.66 0.00 45.98 3.51
5833 11819 3.167485 AGCAAAAGATTTGCCTCATCCA 58.833 40.909 20.66 0.00 45.98 3.41
5834 11820 3.773119 AGCAAAAGATTTGCCTCATCCAT 59.227 39.130 20.66 1.12 45.98 3.41
5835 11821 4.224370 AGCAAAAGATTTGCCTCATCCATT 59.776 37.500 20.66 0.48 45.98 3.16
5836 11822 5.422970 AGCAAAAGATTTGCCTCATCCATTA 59.577 36.000 20.66 0.00 45.98 1.90
5837 11823 6.070653 AGCAAAAGATTTGCCTCATCCATTAA 60.071 34.615 20.66 0.00 45.98 1.40
5838 11824 6.594937 GCAAAAGATTTGCCTCATCCATTAAA 59.405 34.615 15.12 0.00 39.38 1.52
5839 11825 7.281549 GCAAAAGATTTGCCTCATCCATTAAAT 59.718 33.333 15.12 0.00 39.38 1.40
5840 11826 9.820725 CAAAAGATTTGCCTCATCCATTAAATA 57.179 29.630 0.00 0.00 0.00 1.40
5843 11829 9.425248 AAGATTTGCCTCATCCATTAAATAAGA 57.575 29.630 0.00 0.00 0.00 2.10
5844 11830 9.425248 AGATTTGCCTCATCCATTAAATAAGAA 57.575 29.630 0.00 0.00 0.00 2.52
5847 11833 9.874205 TTTGCCTCATCCATTAAATAAGAAAAG 57.126 29.630 0.00 0.00 0.00 2.27
5848 11834 8.821686 TGCCTCATCCATTAAATAAGAAAAGA 57.178 30.769 0.00 0.00 0.00 2.52
5849 11835 9.253832 TGCCTCATCCATTAAATAAGAAAAGAA 57.746 29.630 0.00 0.00 0.00 2.52
5871 11857 9.614792 AAGAATAGAGTTTGACAGTTTACAAGT 57.385 29.630 0.00 0.00 0.00 3.16
5872 11858 9.046296 AGAATAGAGTTTGACAGTTTACAAGTG 57.954 33.333 0.00 0.00 37.83 3.16
5873 11859 8.958119 AATAGAGTTTGACAGTTTACAAGTGA 57.042 30.769 0.00 0.00 35.76 3.41
5874 11860 6.663944 AGAGTTTGACAGTTTACAAGTGAC 57.336 37.500 0.00 0.00 35.76 3.67
5875 11861 5.585047 AGAGTTTGACAGTTTACAAGTGACC 59.415 40.000 0.00 0.00 35.76 4.02
5876 11862 4.638865 AGTTTGACAGTTTACAAGTGACCC 59.361 41.667 0.00 0.00 35.76 4.46
5877 11863 4.497291 TTGACAGTTTACAAGTGACCCT 57.503 40.909 0.00 0.00 35.76 4.34
5878 11864 5.617528 TTGACAGTTTACAAGTGACCCTA 57.382 39.130 0.00 0.00 35.76 3.53
5879 11865 5.818678 TGACAGTTTACAAGTGACCCTAT 57.181 39.130 0.00 0.00 35.76 2.57
5880 11866 6.921486 TGACAGTTTACAAGTGACCCTATA 57.079 37.500 0.00 0.00 35.76 1.31
5881 11867 7.305813 TGACAGTTTACAAGTGACCCTATAA 57.694 36.000 0.00 0.00 35.76 0.98
5882 11868 7.737869 TGACAGTTTACAAGTGACCCTATAAA 58.262 34.615 0.00 0.00 35.76 1.40
5883 11869 8.380099 TGACAGTTTACAAGTGACCCTATAAAT 58.620 33.333 0.00 0.00 35.76 1.40
5884 11870 9.880157 GACAGTTTACAAGTGACCCTATAAATA 57.120 33.333 0.00 0.00 35.76 1.40
5890 11876 9.895138 TTACAAGTGACCCTATAAATAAACCTC 57.105 33.333 0.00 0.00 0.00 3.85
5891 11877 8.159229 ACAAGTGACCCTATAAATAAACCTCT 57.841 34.615 0.00 0.00 0.00 3.69
5892 11878 8.265764 ACAAGTGACCCTATAAATAAACCTCTC 58.734 37.037 0.00 0.00 0.00 3.20
5893 11879 7.052142 AGTGACCCTATAAATAAACCTCTCG 57.948 40.000 0.00 0.00 0.00 4.04
5894 11880 6.610425 AGTGACCCTATAAATAAACCTCTCGT 59.390 38.462 0.00 0.00 0.00 4.18
5895 11881 7.781693 AGTGACCCTATAAATAAACCTCTCGTA 59.218 37.037 0.00 0.00 0.00 3.43
5896 11882 7.864882 GTGACCCTATAAATAAACCTCTCGTAC 59.135 40.741 0.00 0.00 0.00 3.67
5897 11883 7.560991 TGACCCTATAAATAAACCTCTCGTACA 59.439 37.037 0.00 0.00 0.00 2.90
5898 11884 8.310122 ACCCTATAAATAAACCTCTCGTACAA 57.690 34.615 0.00 0.00 0.00 2.41
5899 11885 8.200120 ACCCTATAAATAAACCTCTCGTACAAC 58.800 37.037 0.00 0.00 0.00 3.32
5900 11886 8.199449 CCCTATAAATAAACCTCTCGTACAACA 58.801 37.037 0.00 0.00 0.00 3.33
5901 11887 9.590451 CCTATAAATAAACCTCTCGTACAACAA 57.410 33.333 0.00 0.00 0.00 2.83
5906 11892 2.872370 ACCTCTCGTACAACAATACGC 58.128 47.619 0.55 0.00 46.00 4.42
5907 11893 2.190981 CCTCTCGTACAACAATACGCC 58.809 52.381 0.55 0.00 46.00 5.68
5908 11894 2.190981 CTCTCGTACAACAATACGCCC 58.809 52.381 0.55 0.00 46.00 6.13
5909 11895 1.545136 TCTCGTACAACAATACGCCCA 59.455 47.619 0.55 0.00 46.00 5.36
5910 11896 2.166870 TCTCGTACAACAATACGCCCAT 59.833 45.455 0.55 0.00 46.00 4.00
5911 11897 3.380954 TCTCGTACAACAATACGCCCATA 59.619 43.478 0.55 0.00 46.00 2.74
5912 11898 3.708890 TCGTACAACAATACGCCCATAG 58.291 45.455 0.55 0.00 46.00 2.23
5913 11899 2.798283 CGTACAACAATACGCCCATAGG 59.202 50.000 0.00 0.00 41.28 2.57
5914 11900 3.738899 CGTACAACAATACGCCCATAGGT 60.739 47.826 0.00 0.00 41.28 3.08
5915 11901 3.359695 ACAACAATACGCCCATAGGTT 57.640 42.857 0.00 0.00 34.57 3.50
5916 11902 3.013921 ACAACAATACGCCCATAGGTTG 58.986 45.455 0.00 0.00 39.82 3.77
5917 11903 2.341846 ACAATACGCCCATAGGTTGG 57.658 50.000 0.00 0.00 46.00 3.77
5918 11904 0.951558 CAATACGCCCATAGGTTGGC 59.048 55.000 0.00 0.00 44.97 4.52
5919 11905 0.179001 AATACGCCCATAGGTTGGCC 60.179 55.000 0.00 0.00 45.07 5.36
5921 11907 1.692173 TACGCCCATAGGTTGGCCTC 61.692 60.000 3.32 0.00 45.64 4.70
5922 11908 3.006677 GCCCATAGGTTGGCCTCA 58.993 61.111 3.32 0.00 45.64 3.86
5923 11909 1.306296 GCCCATAGGTTGGCCTCAA 59.694 57.895 3.32 0.00 45.64 3.02
5924 11910 0.753111 GCCCATAGGTTGGCCTCAAG 60.753 60.000 3.32 0.00 45.64 3.02
5925 11911 0.753111 CCCATAGGTTGGCCTCAAGC 60.753 60.000 3.32 0.00 45.64 4.01
5937 11923 5.700373 GTTGGCCTCAAGCAAAATATTTTGA 59.300 36.000 34.51 18.76 46.92 2.69
5938 11924 6.204495 GTTGGCCTCAAGCAAAATATTTTGAA 59.796 34.615 34.51 18.63 46.92 2.69
5939 11925 7.571798 GTTGGCCTCAAGCAAAATATTTTGAAG 60.572 37.037 34.51 24.77 46.92 3.02
5952 11938 7.881775 AATATTTTGAAGAAGAATAGGCGGT 57.118 32.000 0.00 0.00 0.00 5.68
5953 11939 5.567138 ATTTTGAAGAAGAATAGGCGGTG 57.433 39.130 0.00 0.00 0.00 4.94
5954 11940 2.691409 TGAAGAAGAATAGGCGGTGG 57.309 50.000 0.00 0.00 0.00 4.61
5955 11941 1.300481 GAAGAAGAATAGGCGGTGGC 58.700 55.000 0.00 0.00 38.90 5.01
5956 11942 0.462047 AAGAAGAATAGGCGGTGGCG 60.462 55.000 0.00 0.00 41.24 5.69
5957 11943 2.513897 AAGAATAGGCGGTGGCGC 60.514 61.111 0.00 0.00 41.24 6.53
5958 11944 3.323758 AAGAATAGGCGGTGGCGCA 62.324 57.895 10.83 0.00 41.24 6.09
5959 11945 3.573491 GAATAGGCGGTGGCGCAC 61.573 66.667 10.83 5.50 41.24 5.34
5960 11946 4.096003 AATAGGCGGTGGCGCACT 62.096 61.111 10.83 0.00 41.24 4.40
5961 11947 3.622060 AATAGGCGGTGGCGCACTT 62.622 57.895 10.83 0.00 41.24 3.16
5962 11948 3.622060 ATAGGCGGTGGCGCACTTT 62.622 57.895 10.83 0.00 41.24 2.66
5963 11949 3.835790 TAGGCGGTGGCGCACTTTT 62.836 57.895 10.83 0.00 41.24 2.27
5964 11950 4.999939 GGCGGTGGCGCACTTTTG 63.000 66.667 10.83 0.00 41.24 2.44
5965 11951 4.264638 GCGGTGGCGCACTTTTGT 62.265 61.111 10.83 0.00 34.40 2.83
5976 11962 1.555477 CACTTTTGTGGCGAAACACC 58.445 50.000 0.00 0.00 46.16 4.16
5977 11963 0.458260 ACTTTTGTGGCGAAACACCC 59.542 50.000 0.00 0.00 40.62 4.61
5978 11964 0.593773 CTTTTGTGGCGAAACACCCG 60.594 55.000 0.00 0.00 40.62 5.28
5979 11965 2.005960 TTTTGTGGCGAAACACCCGG 62.006 55.000 0.00 0.00 40.62 5.73
5980 11966 2.888464 TTTGTGGCGAAACACCCGGA 62.888 55.000 0.73 0.00 40.62 5.14
5981 11967 3.351416 GTGGCGAAACACCCGGAC 61.351 66.667 0.73 0.00 35.34 4.79
5982 11968 4.973055 TGGCGAAACACCCGGACG 62.973 66.667 0.73 0.00 0.00 4.79
5983 11969 4.974989 GGCGAAACACCCGGACGT 62.975 66.667 0.73 0.00 0.00 4.34
5984 11970 2.968697 GCGAAACACCCGGACGTT 60.969 61.111 0.73 2.11 0.00 3.99
5985 11971 2.536673 GCGAAACACCCGGACGTTT 61.537 57.895 17.79 17.79 38.02 3.60
5986 11972 1.566077 CGAAACACCCGGACGTTTC 59.434 57.895 26.39 26.39 44.81 2.78
5987 11973 0.877213 CGAAACACCCGGACGTTTCT 60.877 55.000 29.82 11.53 45.64 2.52
5988 11974 0.863799 GAAACACCCGGACGTTTCTC 59.136 55.000 27.79 13.46 44.83 2.87
5989 11975 0.466963 AAACACCCGGACGTTTCTCT 59.533 50.000 0.73 0.00 29.44 3.10
5990 11976 0.033090 AACACCCGGACGTTTCTCTC 59.967 55.000 0.73 0.00 0.00 3.20
5991 11977 1.111116 ACACCCGGACGTTTCTCTCA 61.111 55.000 0.73 0.00 0.00 3.27
5992 11978 0.246635 CACCCGGACGTTTCTCTCAT 59.753 55.000 0.73 0.00 0.00 2.90
5993 11979 0.974383 ACCCGGACGTTTCTCTCATT 59.026 50.000 0.73 0.00 0.00 2.57
5994 11980 1.067071 ACCCGGACGTTTCTCTCATTC 60.067 52.381 0.73 0.00 0.00 2.67
5995 11981 1.641577 CCGGACGTTTCTCTCATTCC 58.358 55.000 0.00 0.00 0.00 3.01
5996 11982 1.067142 CCGGACGTTTCTCTCATTCCA 60.067 52.381 0.00 0.00 0.00 3.53
5997 11983 2.611971 CCGGACGTTTCTCTCATTCCAA 60.612 50.000 0.00 0.00 0.00 3.53
5998 11984 3.064207 CGGACGTTTCTCTCATTCCAAA 58.936 45.455 0.00 0.00 0.00 3.28
5999 11985 3.123621 CGGACGTTTCTCTCATTCCAAAG 59.876 47.826 0.00 0.00 0.00 2.77
6000 11986 4.315803 GGACGTTTCTCTCATTCCAAAGA 58.684 43.478 0.00 0.00 0.00 2.52
6001 11987 4.390297 GGACGTTTCTCTCATTCCAAAGAG 59.610 45.833 0.00 0.00 40.34 2.85
6002 11988 4.962155 ACGTTTCTCTCATTCCAAAGAGT 58.038 39.130 0.00 0.00 39.99 3.24
6003 11989 4.991687 ACGTTTCTCTCATTCCAAAGAGTC 59.008 41.667 0.00 0.00 39.99 3.36
6004 11990 4.390297 CGTTTCTCTCATTCCAAAGAGTCC 59.610 45.833 0.00 0.00 39.99 3.85
6005 11991 5.308825 GTTTCTCTCATTCCAAAGAGTCCA 58.691 41.667 0.00 0.00 39.99 4.02
6006 11992 5.567037 TTCTCTCATTCCAAAGAGTCCAA 57.433 39.130 0.00 0.00 39.99 3.53
6007 11993 5.157940 TCTCTCATTCCAAAGAGTCCAAG 57.842 43.478 0.00 0.00 39.99 3.61
6008 11994 4.840680 TCTCTCATTCCAAAGAGTCCAAGA 59.159 41.667 0.00 0.00 39.99 3.02
6009 11995 5.046735 TCTCTCATTCCAAAGAGTCCAAGAG 60.047 44.000 0.00 0.00 39.99 2.85
6010 11996 4.840680 TCTCATTCCAAAGAGTCCAAGAGA 59.159 41.667 0.00 0.00 33.63 3.10
6011 11997 4.899502 TCATTCCAAAGAGTCCAAGAGAC 58.100 43.478 0.00 0.00 46.71 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.025262 GGTGCCCACGGGATTTTTATAA 58.975 45.455 6.21 0.00 37.50 0.98
1 2 2.025226 TGGTGCCCACGGGATTTTTATA 60.025 45.455 6.21 0.00 37.50 0.98
2 3 1.272760 TGGTGCCCACGGGATTTTTAT 60.273 47.619 6.21 0.00 37.50 1.40
3 4 0.112606 TGGTGCCCACGGGATTTTTA 59.887 50.000 6.21 0.00 37.50 1.52
4 5 1.152440 TGGTGCCCACGGGATTTTT 60.152 52.632 6.21 0.00 37.50 1.94
5 6 1.606313 CTGGTGCCCACGGGATTTT 60.606 57.895 6.21 0.00 37.50 1.82
6 7 2.035626 CTGGTGCCCACGGGATTT 59.964 61.111 6.21 0.00 37.50 2.17
7 8 2.933287 TCTGGTGCCCACGGGATT 60.933 61.111 6.21 0.00 37.50 3.01
8 9 3.402681 CTCTGGTGCCCACGGGAT 61.403 66.667 6.21 0.00 37.50 3.85
9 10 3.924013 ATCTCTGGTGCCCACGGGA 62.924 63.158 6.21 0.00 37.50 5.14
10 11 3.391665 GATCTCTGGTGCCCACGGG 62.392 68.421 0.00 0.00 38.57 5.28
11 12 2.187946 GATCTCTGGTGCCCACGG 59.812 66.667 0.00 0.00 0.00 4.94
12 13 1.153489 CAGATCTCTGGTGCCCACG 60.153 63.158 0.00 0.00 40.20 4.94
13 14 0.177604 CTCAGATCTCTGGTGCCCAC 59.822 60.000 7.33 0.00 43.91 4.61
14 15 0.979709 CCTCAGATCTCTGGTGCCCA 60.980 60.000 7.33 0.00 43.91 5.36
15 16 0.689080 TCCTCAGATCTCTGGTGCCC 60.689 60.000 7.33 0.00 43.91 5.36
16 17 1.422531 ATCCTCAGATCTCTGGTGCC 58.577 55.000 7.33 0.00 43.91 5.01
17 18 2.545532 CGAATCCTCAGATCTCTGGTGC 60.546 54.545 7.33 2.11 43.91 5.01
18 19 2.545532 GCGAATCCTCAGATCTCTGGTG 60.546 54.545 7.33 1.71 43.91 4.17
19 20 1.686052 GCGAATCCTCAGATCTCTGGT 59.314 52.381 7.33 0.00 43.91 4.00
20 21 1.335780 CGCGAATCCTCAGATCTCTGG 60.336 57.143 0.00 0.00 43.91 3.86
21 22 1.336440 ACGCGAATCCTCAGATCTCTG 59.664 52.381 15.93 0.56 45.08 3.35
22 23 1.336440 CACGCGAATCCTCAGATCTCT 59.664 52.381 15.93 0.00 0.00 3.10
23 24 1.066303 ACACGCGAATCCTCAGATCTC 59.934 52.381 15.93 0.00 0.00 2.75
24 25 1.107114 ACACGCGAATCCTCAGATCT 58.893 50.000 15.93 0.00 0.00 2.75
25 26 1.203928 CACACGCGAATCCTCAGATC 58.796 55.000 15.93 0.00 0.00 2.75
26 27 0.532573 ACACACGCGAATCCTCAGAT 59.467 50.000 15.93 0.00 0.00 2.90
27 28 0.388520 CACACACGCGAATCCTCAGA 60.389 55.000 15.93 0.00 0.00 3.27
28 29 1.959899 GCACACACGCGAATCCTCAG 61.960 60.000 15.93 0.00 0.00 3.35
29 30 2.027073 GCACACACGCGAATCCTCA 61.027 57.895 15.93 0.00 0.00 3.86
39 40 1.298041 GGTCGGTTTTGCACACACG 60.298 57.895 0.00 0.00 0.00 4.49
42 43 0.307760 CTCTGGTCGGTTTTGCACAC 59.692 55.000 0.00 0.00 0.00 3.82
51 52 3.367498 CGAGATTTTTCTCTCTGGTCGGT 60.367 47.826 1.90 0.00 39.65 4.69
52 53 3.119459 TCGAGATTTTTCTCTCTGGTCGG 60.119 47.826 1.90 0.00 39.65 4.79
53 54 4.098055 TCGAGATTTTTCTCTCTGGTCG 57.902 45.455 1.90 0.00 39.65 4.79
54 55 5.047188 GGATCGAGATTTTTCTCTCTGGTC 58.953 45.833 0.00 0.00 39.65 4.02
55 56 4.440802 CGGATCGAGATTTTTCTCTCTGGT 60.441 45.833 0.00 0.00 39.65 4.00
57 58 4.737765 GTCGGATCGAGATTTTTCTCTCTG 59.262 45.833 0.00 0.00 39.65 3.35
58 59 4.496673 CGTCGGATCGAGATTTTTCTCTCT 60.497 45.833 0.00 0.00 39.65 3.10
60 61 3.489398 CCGTCGGATCGAGATTTTTCTCT 60.489 47.826 4.91 0.00 36.23 3.10
61 62 2.789893 CCGTCGGATCGAGATTTTTCTC 59.210 50.000 4.91 0.00 36.23 2.87
62 63 2.810650 CCGTCGGATCGAGATTTTTCT 58.189 47.619 4.91 0.00 36.23 2.52
63 64 1.258197 GCCGTCGGATCGAGATTTTTC 59.742 52.381 17.49 0.00 36.23 2.29
84 85 1.278637 GGTCAACCGCTCGTTTGTG 59.721 57.895 0.00 0.00 29.93 3.33
86 87 0.041312 CTTGGTCAACCGCTCGTTTG 60.041 55.000 0.00 0.00 39.43 2.93
87 88 0.179067 TCTTGGTCAACCGCTCGTTT 60.179 50.000 0.00 0.00 39.43 3.60
90 91 0.234884 GTTTCTTGGTCAACCGCTCG 59.765 55.000 0.00 0.00 39.43 5.03
93 94 1.264288 CTCTGTTTCTTGGTCAACCGC 59.736 52.381 0.00 0.00 39.43 5.68
110 111 2.644060 AAAGCTGGTAGGGGTACTCT 57.356 50.000 0.00 0.00 0.00 3.24
142 152 2.361610 GGCATGGTGGGTGGTGAG 60.362 66.667 0.00 0.00 0.00 3.51
144 154 4.659172 ACGGCATGGTGGGTGGTG 62.659 66.667 0.00 0.00 0.00 4.17
182 198 0.179054 GTAGAATGTTCGGGGGCCTC 60.179 60.000 0.84 0.00 0.00 4.70
183 199 0.620700 AGTAGAATGTTCGGGGGCCT 60.621 55.000 0.84 0.00 0.00 5.19
184 200 0.255033 AAGTAGAATGTTCGGGGGCC 59.745 55.000 0.00 0.00 0.00 5.80
185 201 1.743394 CAAAGTAGAATGTTCGGGGGC 59.257 52.381 0.00 0.00 0.00 5.80
186 202 2.026636 TCCAAAGTAGAATGTTCGGGGG 60.027 50.000 0.00 0.00 0.00 5.40
240 271 1.836802 AGTCCGAGACTCCAAGGTAC 58.163 55.000 0.00 0.00 38.71 3.34
241 272 2.168496 CAAGTCCGAGACTCCAAGGTA 58.832 52.381 6.96 0.00 42.59 3.08
242 273 0.969894 CAAGTCCGAGACTCCAAGGT 59.030 55.000 6.96 0.00 42.59 3.50
243 274 0.390472 GCAAGTCCGAGACTCCAAGG 60.390 60.000 6.96 0.00 42.59 3.61
244 275 0.318441 TGCAAGTCCGAGACTCCAAG 59.682 55.000 6.96 1.15 42.59 3.61
254 285 2.476051 GCGTGATGTGCAAGTCCG 59.524 61.111 0.00 0.00 0.00 4.79
262 293 3.857854 GCTGGCTCGCGTGATGTG 61.858 66.667 13.13 0.00 0.00 3.21
299 330 1.338020 CGCTGGAGCTTTTGGAAAGTT 59.662 47.619 0.00 0.00 39.32 2.66
382 416 1.219124 CTGCGATACTGTGGCCACT 59.781 57.895 34.75 19.61 0.00 4.00
393 428 3.527533 AGCGGATTTGTTTACTGCGATA 58.472 40.909 0.00 0.00 40.34 2.92
395 430 1.730064 GAGCGGATTTGTTTACTGCGA 59.270 47.619 0.00 0.00 40.34 5.10
396 431 1.202031 GGAGCGGATTTGTTTACTGCG 60.202 52.381 0.00 0.00 40.34 5.18
486 532 2.725008 CGGCGAGGAGATGAGGAC 59.275 66.667 0.00 0.00 0.00 3.85
540 586 2.582436 GGATTTGGACGGAGGCGA 59.418 61.111 0.00 0.00 0.00 5.54
544 590 2.890474 CGCGGGATTTGGACGGAG 60.890 66.667 0.00 0.00 0.00 4.63
572 618 0.890996 AACAAGGAAGGAAGGCTGCG 60.891 55.000 0.00 0.00 0.00 5.18
892 959 2.436824 GAGCCAAGAACCGCCTCC 60.437 66.667 0.00 0.00 0.00 4.30
911 978 1.190833 ATATCGGGGAGCAGCAGAGG 61.191 60.000 0.00 0.00 0.00 3.69
1350 1436 5.717078 ACAATCAAGCAACATGAGTTCAT 57.283 34.783 0.00 0.00 35.28 2.57
1389 1478 6.865834 AGAATACATAAGAGGGCATAGGAG 57.134 41.667 0.00 0.00 0.00 3.69
1412 1509 4.888917 TCATGTGTGTAATTCGACCAGAA 58.111 39.130 0.00 0.00 43.93 3.02
1576 2713 9.814899 ACAAATCACACAATCAATAAAAGTCAA 57.185 25.926 0.00 0.00 0.00 3.18
1634 2771 8.612145 ACCTAATCTCAAAACCTGTACCTATTT 58.388 33.333 0.00 0.00 0.00 1.40
1660 2797 4.588899 AGCATGCTACTGGATTAAACACA 58.411 39.130 21.21 0.00 0.00 3.72
1700 2837 2.741486 TAAGGCGCCCAGTTGGACAC 62.741 60.000 26.15 0.00 37.39 3.67
1702 2839 0.891904 TTTAAGGCGCCCAGTTGGAC 60.892 55.000 26.15 0.00 37.39 4.02
1705 2842 1.175983 TGGTTTAAGGCGCCCAGTTG 61.176 55.000 26.15 0.00 0.00 3.16
1727 2864 0.665835 ATCGCACTTTGCCGAACAAA 59.334 45.000 3.96 3.96 46.01 2.83
1729 2866 1.573932 CATCGCACTTTGCCGAACA 59.426 52.632 0.00 0.00 41.12 3.18
1730 2867 1.797537 GCATCGCACTTTGCCGAAC 60.798 57.895 0.00 0.00 41.12 3.95
1731 2868 2.560861 GCATCGCACTTTGCCGAA 59.439 55.556 0.00 0.00 41.12 4.30
1748 2938 4.929808 ACGAATAACTGTCAAACTGCTAGG 59.070 41.667 0.00 0.00 0.00 3.02
1776 2966 7.396055 TGAAGTTCAAGGATTAATTAACAGGGG 59.604 37.037 2.20 0.00 0.00 4.79
1819 3009 6.083630 GCGAAAATACTAAGCATTGTGTGAA 58.916 36.000 0.00 0.00 0.00 3.18
1873 3065 7.007725 CACACTAGAAATGAATTTTGATGCGTC 59.992 37.037 0.00 0.00 0.00 5.19
1876 3068 8.524870 AACACACTAGAAATGAATTTTGATGC 57.475 30.769 0.00 0.00 0.00 3.91
1945 3137 5.762218 ACTACATAATTCAGATGCAGCTTCC 59.238 40.000 0.00 0.00 0.00 3.46
2308 3583 9.471084 CCCTTCACGTGTTAAGATTTTTAAAAT 57.529 29.630 16.51 2.23 0.00 1.82
2433 3708 1.818060 TCTGGGCACACAAATATGCAC 59.182 47.619 0.00 0.00 45.87 4.57
2974 4890 1.468127 TGAACAACATACAGGCATGCG 59.532 47.619 12.44 0.62 0.00 4.73
3413 5330 1.213926 AGGACAGGATTGATGGAAGCC 59.786 52.381 0.00 0.00 40.82 4.35
3572 5489 2.403252 AACTGCAGAAGGGATTACGG 57.597 50.000 23.35 0.00 0.00 4.02
3580 5497 2.414559 CGCACCAATAAACTGCAGAAGG 60.415 50.000 23.35 13.99 0.00 3.46
3850 5767 6.607600 AGGGAAGGCCAGATTATTACTTTTTC 59.392 38.462 5.01 0.00 35.15 2.29
3862 5779 0.324091 CTGCAAAGGGAAGGCCAGAT 60.324 55.000 5.01 0.00 35.15 2.90
3869 5786 2.444421 AGCTCAATCTGCAAAGGGAAG 58.556 47.619 0.00 0.00 0.00 3.46
3874 5793 6.047870 AGTGTAGATAGCTCAATCTGCAAAG 58.952 40.000 16.08 0.00 46.00 2.77
4087 6006 6.712547 AGTGAGACACCATTTTCTTAAGGAAG 59.287 38.462 1.85 0.00 34.49 3.46
4104 6024 8.097038 ACATGAAGCTCTATTTTAAGTGAGACA 58.903 33.333 0.00 0.00 0.00 3.41
4108 6028 9.507329 AAGAACATGAAGCTCTATTTTAAGTGA 57.493 29.630 0.00 0.00 0.00 3.41
4109 6029 9.766277 GAAGAACATGAAGCTCTATTTTAAGTG 57.234 33.333 0.00 0.00 0.00 3.16
4118 6038 5.489792 ACAAGGAAGAACATGAAGCTCTA 57.510 39.130 0.00 0.00 0.00 2.43
4120 6040 5.448360 GCATACAAGGAAGAACATGAAGCTC 60.448 44.000 0.00 0.00 0.00 4.09
4122 6042 4.156556 TGCATACAAGGAAGAACATGAAGC 59.843 41.667 0.00 0.00 0.00 3.86
4123 6043 5.885230 TGCATACAAGGAAGAACATGAAG 57.115 39.130 0.00 0.00 0.00 3.02
4127 6047 5.413499 GCAAATGCATACAAGGAAGAACAT 58.587 37.500 0.00 0.00 41.59 2.71
4149 6069 3.153919 TGGTTTACCATCAAGAACCTGC 58.846 45.455 0.00 0.00 42.01 4.85
4206 6126 2.360165 GCAATAGATTTCCCACAGGCAG 59.640 50.000 0.00 0.00 0.00 4.85
4210 6130 4.095483 GTCACAGCAATAGATTTCCCACAG 59.905 45.833 0.00 0.00 0.00 3.66
4278 6198 1.339247 ACACGACAAACCTGGTGAACA 60.339 47.619 0.00 0.00 34.59 3.18
4310 6230 0.960364 GAAAATGGCGTGGCAGGAGA 60.960 55.000 12.03 0.00 0.00 3.71
4320 6240 5.247507 TGATACAATGAAGGAAAATGGCG 57.752 39.130 0.00 0.00 0.00 5.69
4334 6254 6.041423 TCTGCGTGGATCATATGATACAAT 57.959 37.500 28.50 3.75 46.16 2.71
4351 6271 2.385013 TTGATGTATGTGCTCTGCGT 57.615 45.000 0.00 0.00 0.00 5.24
4377 6298 0.881796 TGTCCACAGACGAGCAGTAG 59.118 55.000 0.00 0.00 46.74 2.57
4378 6299 0.881796 CTGTCCACAGACGAGCAGTA 59.118 55.000 0.00 0.00 46.74 2.74
4388 6309 0.109597 GCCGCAAATTCTGTCCACAG 60.110 55.000 0.00 0.00 45.08 3.66
4421 6342 0.317269 CAAACGCACTTGGACAGCAG 60.317 55.000 0.00 0.00 0.00 4.24
4466 6387 1.281656 GCGTTTGTCAGGGTTTCCG 59.718 57.895 0.00 0.00 38.33 4.30
4472 6393 2.246761 TATCCGGGCGTTTGTCAGGG 62.247 60.000 0.00 0.00 35.55 4.45
4478 6399 0.874390 CATCCATATCCGGGCGTTTG 59.126 55.000 0.00 0.00 0.00 2.93
4481 6402 1.544825 CCTCATCCATATCCGGGCGT 61.545 60.000 0.00 0.00 0.00 5.68
4487 6408 1.421268 TGCACCACCTCATCCATATCC 59.579 52.381 0.00 0.00 0.00 2.59
4496 6417 0.035152 CCATAAGCTGCACCACCTCA 60.035 55.000 1.02 0.00 0.00 3.86
4553 6474 0.395862 ATCCGGACGACTGACCATCT 60.396 55.000 6.12 0.00 0.00 2.90
4559 6480 1.067060 CATAAGCATCCGGACGACTGA 59.933 52.381 6.12 0.00 0.00 3.41
4621 6542 1.839994 CACATAGCCAAAGGGAGGAGA 59.160 52.381 0.00 0.00 35.59 3.71
4794 6719 3.512680 ACAACAGAGTGCTATACGAAGC 58.487 45.455 0.00 0.00 43.08 3.86
4807 6732 5.235616 ACAACGTACCATTACAACAACAGAG 59.764 40.000 0.00 0.00 0.00 3.35
4859 6794 4.696479 ATGAGAGAGAGAGAGAGACCTC 57.304 50.000 0.00 0.00 39.72 3.85
4860 6795 4.723789 AGAATGAGAGAGAGAGAGAGACCT 59.276 45.833 0.00 0.00 0.00 3.85
4861 6796 5.041191 AGAATGAGAGAGAGAGAGAGACC 57.959 47.826 0.00 0.00 0.00 3.85
4862 6797 5.297776 CCAAGAATGAGAGAGAGAGAGAGAC 59.702 48.000 0.00 0.00 0.00 3.36
4863 6798 5.191522 TCCAAGAATGAGAGAGAGAGAGAGA 59.808 44.000 0.00 0.00 0.00 3.10
4864 6799 5.439721 TCCAAGAATGAGAGAGAGAGAGAG 58.560 45.833 0.00 0.00 0.00 3.20
4865 6800 5.439721 CTCCAAGAATGAGAGAGAGAGAGA 58.560 45.833 0.00 0.00 31.26 3.10
4866 6801 4.037208 GCTCCAAGAATGAGAGAGAGAGAG 59.963 50.000 0.00 0.00 31.26 3.20
4867 6802 3.953612 GCTCCAAGAATGAGAGAGAGAGA 59.046 47.826 0.00 0.00 31.26 3.10
4868 6803 3.956199 AGCTCCAAGAATGAGAGAGAGAG 59.044 47.826 0.00 0.00 31.26 3.20
4918 6854 2.894240 TAAATCCGAGACGTGCCGCC 62.894 60.000 0.00 0.00 0.00 6.13
4931 6867 3.120130 TCAAAACATGACGCGGTAAATCC 60.120 43.478 12.47 0.00 31.50 3.01
4933 6869 4.491234 TTCAAAACATGACGCGGTAAAT 57.509 36.364 12.47 0.00 37.92 1.40
4934 6870 3.965292 TTCAAAACATGACGCGGTAAA 57.035 38.095 12.47 0.00 37.92 2.01
5034 6974 2.095263 GTGAATGTGCCGTAAATGCTGT 60.095 45.455 0.00 0.00 0.00 4.40
5035 6975 2.162208 AGTGAATGTGCCGTAAATGCTG 59.838 45.455 0.00 0.00 0.00 4.41
5039 6979 2.790433 ACCAGTGAATGTGCCGTAAAT 58.210 42.857 0.00 0.00 0.00 1.40
5044 6984 1.497278 CGAACCAGTGAATGTGCCG 59.503 57.895 0.00 0.00 0.00 5.69
5047 6987 1.156736 GTCCCGAACCAGTGAATGTG 58.843 55.000 0.00 0.00 0.00 3.21
5062 7002 4.340950 TGTTTCAAAATCACCTCAAGTCCC 59.659 41.667 0.00 0.00 0.00 4.46
5074 7014 4.270808 CCAGCACCAACTTGTTTCAAAATC 59.729 41.667 0.00 0.00 0.00 2.17
5082 7022 0.175531 GCAACCAGCACCAACTTGTT 59.824 50.000 0.00 0.00 44.79 2.83
5100 7040 2.352342 GCTGAAATCTCAAGAGCAGAGC 59.648 50.000 9.96 0.00 33.15 4.09
5141 7081 0.462759 AGTAATTCAGCTCAGCCGGC 60.463 55.000 21.89 21.89 0.00 6.13
5144 7084 2.159085 ACGGTAGTAATTCAGCTCAGCC 60.159 50.000 0.00 0.00 0.00 4.85
5145 7085 3.166489 ACGGTAGTAATTCAGCTCAGC 57.834 47.619 0.00 0.00 0.00 4.26
5146 7086 4.202020 TGCTACGGTAGTAATTCAGCTCAG 60.202 45.833 16.05 0.00 30.50 3.35
5147 7087 3.697542 TGCTACGGTAGTAATTCAGCTCA 59.302 43.478 16.05 0.00 30.50 4.26
5148 7088 4.303086 TGCTACGGTAGTAATTCAGCTC 57.697 45.455 16.05 0.00 30.50 4.09
5159 7099 2.604914 CTGTCATTGCTTGCTACGGTAG 59.395 50.000 10.83 10.83 0.00 3.18
5180 7120 9.744468 CCCTTAAATAAACATTATTACAGGCAC 57.256 33.333 11.40 0.00 0.00 5.01
5203 7143 2.379907 TCAGCTCCATTCCTTTTTCCCT 59.620 45.455 0.00 0.00 0.00 4.20
5240 7197 8.038351 CACCCGGATTCCAATTACTTTAATTTT 58.962 33.333 0.73 0.00 36.29 1.82
5243 7200 6.428295 TCACCCGGATTCCAATTACTTTAAT 58.572 36.000 0.73 0.00 0.00 1.40
5245 7202 5.438698 TCACCCGGATTCCAATTACTTTA 57.561 39.130 0.73 0.00 0.00 1.85
5246 7203 4.310022 TCACCCGGATTCCAATTACTTT 57.690 40.909 0.73 0.00 0.00 2.66
5251 7224 1.411501 CCCATCACCCGGATTCCAATT 60.412 52.381 0.73 0.00 32.57 2.32
5259 7232 1.002921 ACTGATCCCATCACCCGGA 59.997 57.895 0.73 0.00 35.06 5.14
5264 7237 3.449018 ACACTAGACACTGATCCCATCAC 59.551 47.826 0.00 0.00 35.06 3.06
5284 7257 5.835257 ACGCAAACAAAGTACTAGTAGACA 58.165 37.500 1.87 0.00 0.00 3.41
5293 7267 0.720173 CCGCGACGCAAACAAAGTAC 60.720 55.000 21.35 0.00 0.00 2.73
5295 7269 1.707239 TTCCGCGACGCAAACAAAGT 61.707 50.000 21.35 0.00 0.00 2.66
5296 7270 0.385473 ATTCCGCGACGCAAACAAAG 60.385 50.000 21.35 0.80 0.00 2.77
5297 7271 0.658829 CATTCCGCGACGCAAACAAA 60.659 50.000 21.35 6.25 0.00 2.83
5300 7274 1.225745 CTCATTCCGCGACGCAAAC 60.226 57.895 21.35 0.00 0.00 2.93
5301 7275 1.225376 AACTCATTCCGCGACGCAAA 61.225 50.000 21.35 13.62 0.00 3.68
5302 7276 1.225376 AAACTCATTCCGCGACGCAA 61.225 50.000 21.35 7.93 0.00 4.85
5303 7277 0.388778 TAAACTCATTCCGCGACGCA 60.389 50.000 21.35 0.00 0.00 5.24
5305 7279 1.320555 CACTAAACTCATTCCGCGACG 59.679 52.381 8.23 0.00 0.00 5.12
5306 7280 1.659098 CCACTAAACTCATTCCGCGAC 59.341 52.381 8.23 0.00 0.00 5.19
5308 7282 1.722011 ACCACTAAACTCATTCCGCG 58.278 50.000 0.00 0.00 0.00 6.46
5309 7283 2.414161 GCAACCACTAAACTCATTCCGC 60.414 50.000 0.00 0.00 0.00 5.54
5310 7284 2.159707 CGCAACCACTAAACTCATTCCG 60.160 50.000 0.00 0.00 0.00 4.30
5311 7285 2.812011 ACGCAACCACTAAACTCATTCC 59.188 45.455 0.00 0.00 0.00 3.01
5332 11011 2.270923 GCGTGCTATCACTCACATGAA 58.729 47.619 0.00 0.00 40.99 2.57
5360 11048 1.729284 TTACCATCGGCTTTTCGTCC 58.271 50.000 0.00 0.00 0.00 4.79
5402 11096 2.607411 TATGATGGCGCCACCCACAG 62.607 60.000 35.50 0.00 37.79 3.66
5408 11102 1.466167 GACATGATATGATGGCGCCAC 59.534 52.381 35.50 25.23 0.00 5.01
5409 11103 1.812235 GACATGATATGATGGCGCCA 58.188 50.000 34.80 34.80 0.00 5.69
5413 11107 3.431233 CAGTCACGACATGATATGATGGC 59.569 47.826 7.11 2.23 40.28 4.40
5414 11108 3.992427 CCAGTCACGACATGATATGATGG 59.008 47.826 7.11 5.98 40.28 3.51
5415 11109 3.992427 CCCAGTCACGACATGATATGATG 59.008 47.826 0.00 0.06 40.28 3.07
5416 11110 3.897505 TCCCAGTCACGACATGATATGAT 59.102 43.478 0.00 0.00 40.28 2.45
5417 11111 3.295973 TCCCAGTCACGACATGATATGA 58.704 45.455 0.00 0.00 40.28 2.15
5418 11112 3.319122 TCTCCCAGTCACGACATGATATG 59.681 47.826 0.00 0.00 40.28 1.78
5419 11113 3.566351 TCTCCCAGTCACGACATGATAT 58.434 45.455 0.00 0.00 40.28 1.63
5420 11114 3.012934 TCTCCCAGTCACGACATGATA 57.987 47.619 0.00 0.00 40.28 2.15
5428 11122 0.898320 AACCTCATCTCCCAGTCACG 59.102 55.000 0.00 0.00 0.00 4.35
5452 11146 4.263331 CCCTAGCTTTTGGTTCTACTCCAA 60.263 45.833 0.00 0.00 42.29 3.53
5453 11147 3.263425 CCCTAGCTTTTGGTTCTACTCCA 59.737 47.826 0.00 0.00 0.00 3.86
5454 11148 3.875125 CCCTAGCTTTTGGTTCTACTCC 58.125 50.000 0.00 0.00 0.00 3.85
5455 11149 3.271729 GCCCTAGCTTTTGGTTCTACTC 58.728 50.000 0.00 0.00 35.50 2.59
5456 11150 2.642807 TGCCCTAGCTTTTGGTTCTACT 59.357 45.455 0.00 0.00 40.80 2.57
5457 11151 3.067684 TGCCCTAGCTTTTGGTTCTAC 57.932 47.619 0.00 0.00 40.80 2.59
5458 11152 3.265737 TCATGCCCTAGCTTTTGGTTCTA 59.734 43.478 0.00 0.00 40.80 2.10
5459 11153 2.041620 TCATGCCCTAGCTTTTGGTTCT 59.958 45.455 0.00 0.00 40.80 3.01
5475 11169 4.092343 GGAGCCATCCCATCATGC 57.908 61.111 0.00 0.00 40.03 4.06
5484 11178 3.837146 TCTATGAGGATTGAGGAGCCATC 59.163 47.826 0.00 0.00 35.81 3.51
5486 11180 3.116977 TCTCTATGAGGATTGAGGAGCCA 60.117 47.826 0.00 0.00 35.81 4.75
5487 11181 3.505386 TCTCTATGAGGATTGAGGAGCC 58.495 50.000 0.00 0.00 33.61 4.70
5488 11182 6.095440 GTCTATCTCTATGAGGATTGAGGAGC 59.905 46.154 0.00 0.00 33.61 4.70
5489 11183 6.316140 CGTCTATCTCTATGAGGATTGAGGAG 59.684 46.154 0.00 0.00 34.30 3.69
5490 11184 6.176896 CGTCTATCTCTATGAGGATTGAGGA 58.823 44.000 0.00 0.00 34.30 3.71
5491 11185 5.356751 CCGTCTATCTCTATGAGGATTGAGG 59.643 48.000 0.00 0.00 33.61 3.86
5492 11186 5.163663 GCCGTCTATCTCTATGAGGATTGAG 60.164 48.000 0.00 0.00 33.97 3.02
5494 11188 4.438065 CGCCGTCTATCTCTATGAGGATTG 60.438 50.000 0.00 0.00 0.00 2.67
5496 11190 3.275143 CGCCGTCTATCTCTATGAGGAT 58.725 50.000 0.00 0.00 0.00 3.24
5497 11191 2.701107 CGCCGTCTATCTCTATGAGGA 58.299 52.381 0.00 0.00 0.00 3.71
5498 11192 1.131504 GCGCCGTCTATCTCTATGAGG 59.868 57.143 0.00 0.00 0.00 3.86
5502 11467 1.068194 GCTTGCGCCGTCTATCTCTAT 60.068 52.381 4.18 0.00 0.00 1.98
5535 11500 1.796459 CCACCAGTTTAGGACGAAACG 59.204 52.381 0.00 0.00 42.89 3.60
5542 11507 2.327325 AGAGCTCCACCAGTTTAGGA 57.673 50.000 10.93 0.00 0.00 2.94
5544 11509 2.485814 GCAAAGAGCTCCACCAGTTTAG 59.514 50.000 10.93 0.52 41.15 1.85
5547 11512 0.886490 CGCAAAGAGCTCCACCAGTT 60.886 55.000 10.93 0.00 42.61 3.16
5562 11527 0.529555 GTTTCCTTGGCTTTGCGCAA 60.530 50.000 21.02 21.02 41.67 4.85
5568 11533 1.756538 CACCTGTGTTTCCTTGGCTTT 59.243 47.619 0.00 0.00 0.00 3.51
5572 11537 1.032014 CACCACCTGTGTTTCCTTGG 58.968 55.000 0.00 0.00 40.26 3.61
5611 11597 2.035576 GGAAATATGGCGACTAGGACGT 59.964 50.000 11.85 0.00 0.00 4.34
5612 11598 2.296471 AGGAAATATGGCGACTAGGACG 59.704 50.000 7.13 7.13 0.00 4.79
5613 11599 4.058817 CAAGGAAATATGGCGACTAGGAC 58.941 47.826 0.00 0.00 0.00 3.85
5614 11600 3.494398 GCAAGGAAATATGGCGACTAGGA 60.494 47.826 0.00 0.00 0.00 2.94
5625 11611 0.923358 TGGACGGGGCAAGGAAATAT 59.077 50.000 0.00 0.00 0.00 1.28
5636 11622 1.119684 TGATGTGTCTATGGACGGGG 58.880 55.000 4.63 0.00 44.83 5.73
5643 11629 7.709149 TCCCAGAGTATATGATGTGTCTATG 57.291 40.000 0.00 0.00 0.00 2.23
5644 11630 8.756927 CAATCCCAGAGTATATGATGTGTCTAT 58.243 37.037 0.00 0.00 0.00 1.98
5645 11631 7.310052 GCAATCCCAGAGTATATGATGTGTCTA 60.310 40.741 0.00 0.00 0.00 2.59
5646 11632 6.519721 GCAATCCCAGAGTATATGATGTGTCT 60.520 42.308 0.00 0.00 0.00 3.41
5647 11633 5.641209 GCAATCCCAGAGTATATGATGTGTC 59.359 44.000 0.00 0.00 0.00 3.67
5648 11634 5.309020 AGCAATCCCAGAGTATATGATGTGT 59.691 40.000 0.00 0.00 0.00 3.72
5649 11635 5.802465 AGCAATCCCAGAGTATATGATGTG 58.198 41.667 0.00 0.00 0.00 3.21
5650 11636 6.236409 CAAGCAATCCCAGAGTATATGATGT 58.764 40.000 0.00 0.00 0.00 3.06
5651 11637 5.123502 GCAAGCAATCCCAGAGTATATGATG 59.876 44.000 0.00 0.00 0.00 3.07
5652 11638 5.251764 GCAAGCAATCCCAGAGTATATGAT 58.748 41.667 0.00 0.00 0.00 2.45
5653 11639 4.505566 GGCAAGCAATCCCAGAGTATATGA 60.506 45.833 0.00 0.00 0.00 2.15
5654 11640 3.755378 GGCAAGCAATCCCAGAGTATATG 59.245 47.826 0.00 0.00 0.00 1.78
5655 11641 3.395607 TGGCAAGCAATCCCAGAGTATAT 59.604 43.478 0.00 0.00 0.00 0.86
5656 11642 2.777114 TGGCAAGCAATCCCAGAGTATA 59.223 45.455 0.00 0.00 0.00 1.47
5662 11648 2.879907 CGTGGCAAGCAATCCCAG 59.120 61.111 0.00 0.00 0.00 4.45
5695 11681 2.636412 CGTCACTTCTCCCGGAGCA 61.636 63.158 9.87 0.00 0.00 4.26
5696 11682 2.182030 CGTCACTTCTCCCGGAGC 59.818 66.667 9.87 0.00 0.00 4.70
5697 11683 2.885861 CCGTCACTTCTCCCGGAG 59.114 66.667 8.30 8.30 43.01 4.63
5698 11684 3.379445 GCCGTCACTTCTCCCGGA 61.379 66.667 0.73 0.00 43.01 5.14
5699 11685 4.452733 GGCCGTCACTTCTCCCGG 62.453 72.222 0.00 0.00 43.22 5.73
5700 11686 4.452733 GGGCCGTCACTTCTCCCG 62.453 72.222 0.00 0.00 0.00 5.14
5701 11687 2.125766 AAAGGGCCGTCACTTCTCCC 62.126 60.000 0.00 0.00 37.24 4.30
5702 11688 0.955919 CAAAGGGCCGTCACTTCTCC 60.956 60.000 0.00 0.00 0.00 3.71
5703 11689 0.250338 ACAAAGGGCCGTCACTTCTC 60.250 55.000 0.00 0.00 0.00 2.87
5704 11690 0.535102 CACAAAGGGCCGTCACTTCT 60.535 55.000 0.00 0.00 0.00 2.85
5705 11691 1.949257 CACAAAGGGCCGTCACTTC 59.051 57.895 0.00 0.00 0.00 3.01
5706 11692 2.193536 GCACAAAGGGCCGTCACTT 61.194 57.895 0.00 0.00 0.00 3.16
5707 11693 2.594592 GCACAAAGGGCCGTCACT 60.595 61.111 0.00 0.00 0.00 3.41
5708 11694 3.670377 GGCACAAAGGGCCGTCAC 61.670 66.667 0.00 0.00 42.39 3.67
5721 11707 1.044611 GAGAGGGAGAGGTATGGCAC 58.955 60.000 0.00 0.00 0.00 5.01
5722 11708 0.105453 GGAGAGGGAGAGGTATGGCA 60.105 60.000 0.00 0.00 0.00 4.92
5723 11709 0.105453 TGGAGAGGGAGAGGTATGGC 60.105 60.000 0.00 0.00 0.00 4.40
5724 11710 1.219213 ACTGGAGAGGGAGAGGTATGG 59.781 57.143 0.00 0.00 0.00 2.74
5725 11711 2.091610 TCACTGGAGAGGGAGAGGTATG 60.092 54.545 0.00 0.00 0.00 2.39
5726 11712 2.218673 TCACTGGAGAGGGAGAGGTAT 58.781 52.381 0.00 0.00 0.00 2.73
5727 11713 1.682478 TCACTGGAGAGGGAGAGGTA 58.318 55.000 0.00 0.00 0.00 3.08
5728 11714 0.787084 TTCACTGGAGAGGGAGAGGT 59.213 55.000 0.00 0.00 31.46 3.85
5729 11715 1.272985 ACTTCACTGGAGAGGGAGAGG 60.273 57.143 0.00 0.00 31.46 3.69
5730 11716 1.824230 CACTTCACTGGAGAGGGAGAG 59.176 57.143 0.00 0.00 31.46 3.20
5731 11717 1.429299 TCACTTCACTGGAGAGGGAGA 59.571 52.381 0.00 0.00 31.46 3.71
5732 11718 1.824230 CTCACTTCACTGGAGAGGGAG 59.176 57.143 0.00 0.00 31.46 4.30
5733 11719 1.930251 CTCACTTCACTGGAGAGGGA 58.070 55.000 0.00 0.00 0.00 4.20
5734 11720 0.248843 GCTCACTTCACTGGAGAGGG 59.751 60.000 0.00 0.00 0.00 4.30
5735 11721 0.108898 CGCTCACTTCACTGGAGAGG 60.109 60.000 0.00 0.00 0.00 3.69
5736 11722 0.735632 GCGCTCACTTCACTGGAGAG 60.736 60.000 0.00 0.00 0.00 3.20
5737 11723 1.181741 AGCGCTCACTTCACTGGAGA 61.182 55.000 2.64 0.00 0.00 3.71
5738 11724 0.735632 GAGCGCTCACTTCACTGGAG 60.736 60.000 31.91 0.00 0.00 3.86
5739 11725 1.290324 GAGCGCTCACTTCACTGGA 59.710 57.895 31.91 0.00 0.00 3.86
5740 11726 2.091112 CGAGCGCTCACTTCACTGG 61.091 63.158 34.69 13.08 0.00 4.00
5741 11727 2.724708 GCGAGCGCTCACTTCACTG 61.725 63.158 34.69 17.90 38.26 3.66
5742 11728 2.431601 GCGAGCGCTCACTTCACT 60.432 61.111 34.69 0.00 38.26 3.41
5743 11729 2.724708 CTGCGAGCGCTCACTTCAC 61.725 63.158 34.69 17.23 42.51 3.18
5744 11730 2.218037 ATCTGCGAGCGCTCACTTCA 62.218 55.000 34.69 23.57 42.51 3.02
5745 11731 1.478622 GATCTGCGAGCGCTCACTTC 61.479 60.000 34.69 20.60 42.51 3.01
5746 11732 1.518133 GATCTGCGAGCGCTCACTT 60.518 57.895 34.69 15.69 42.51 3.16
5747 11733 1.943116 AAGATCTGCGAGCGCTCACT 61.943 55.000 34.69 19.72 42.51 3.41
5748 11734 1.478622 GAAGATCTGCGAGCGCTCAC 61.479 60.000 34.69 26.98 42.51 3.51
5749 11735 1.226802 GAAGATCTGCGAGCGCTCA 60.227 57.895 34.69 17.64 42.51 4.26
5750 11736 1.948635 GGAAGATCTGCGAGCGCTC 60.949 63.158 27.64 27.64 42.51 5.03
5751 11737 2.105930 GGAAGATCTGCGAGCGCT 59.894 61.111 11.27 11.27 42.51 5.92
5752 11738 2.964389 GGGAAGATCTGCGAGCGC 60.964 66.667 8.08 8.08 42.35 5.92
5753 11739 2.279784 GGGGAAGATCTGCGAGCG 60.280 66.667 0.00 0.00 0.00 5.03
5754 11740 1.227497 CTGGGGAAGATCTGCGAGC 60.227 63.158 0.00 0.00 0.00 5.03
5755 11741 0.103937 GTCTGGGGAAGATCTGCGAG 59.896 60.000 0.00 0.00 37.23 5.03
5756 11742 1.667154 CGTCTGGGGAAGATCTGCGA 61.667 60.000 0.00 0.00 37.23 5.10
5757 11743 1.227089 CGTCTGGGGAAGATCTGCG 60.227 63.158 0.00 0.00 37.23 5.18
5758 11744 1.144936 CCGTCTGGGGAAGATCTGC 59.855 63.158 0.00 0.00 37.23 4.26
5759 11745 0.749649 CTCCGTCTGGGGAAGATCTG 59.250 60.000 0.00 0.00 38.40 2.90
5760 11746 0.336737 ACTCCGTCTGGGGAAGATCT 59.663 55.000 0.00 0.00 38.40 2.75
5761 11747 0.461961 CACTCCGTCTGGGGAAGATC 59.538 60.000 0.00 0.00 38.40 2.75
5762 11748 0.978146 CCACTCCGTCTGGGGAAGAT 60.978 60.000 0.00 0.00 38.40 2.40
5763 11749 1.609501 CCACTCCGTCTGGGGAAGA 60.610 63.158 0.00 0.00 38.40 2.87
5764 11750 2.660064 CCCACTCCGTCTGGGGAAG 61.660 68.421 0.00 0.00 44.44 3.46
5765 11751 2.606519 CCCACTCCGTCTGGGGAA 60.607 66.667 0.00 0.00 44.44 3.97
5769 11755 0.176680 CTCATTCCCACTCCGTCTGG 59.823 60.000 0.00 0.00 0.00 3.86
5770 11756 0.176680 CCTCATTCCCACTCCGTCTG 59.823 60.000 0.00 0.00 0.00 3.51
5771 11757 1.617947 GCCTCATTCCCACTCCGTCT 61.618 60.000 0.00 0.00 0.00 4.18
5772 11758 1.153349 GCCTCATTCCCACTCCGTC 60.153 63.158 0.00 0.00 0.00 4.79
5773 11759 1.274703 ATGCCTCATTCCCACTCCGT 61.275 55.000 0.00 0.00 0.00 4.69
5774 11760 0.107017 AATGCCTCATTCCCACTCCG 60.107 55.000 0.00 0.00 26.27 4.63
5775 11761 2.149973 AAATGCCTCATTCCCACTCC 57.850 50.000 0.00 0.00 32.43 3.85
5795 11781 4.358494 TTGCTTCCGTTTCGAAGAAAAA 57.642 36.364 0.00 0.00 45.90 1.94
5796 11782 4.358494 TTTGCTTCCGTTTCGAAGAAAA 57.642 36.364 0.00 1.84 42.59 2.29
5797 11783 4.095185 TCTTTTGCTTCCGTTTCGAAGAAA 59.905 37.500 0.00 0.00 45.90 2.52
5798 11784 3.623960 TCTTTTGCTTCCGTTTCGAAGAA 59.376 39.130 0.00 0.00 45.90 2.52
5799 11785 3.199677 TCTTTTGCTTCCGTTTCGAAGA 58.800 40.909 0.00 0.00 41.57 2.87
5800 11786 3.602390 TCTTTTGCTTCCGTTTCGAAG 57.398 42.857 0.00 0.00 41.88 3.79
5801 11787 4.561735 AATCTTTTGCTTCCGTTTCGAA 57.438 36.364 0.00 0.00 0.00 3.71
5802 11788 4.286910 CAAATCTTTTGCTTCCGTTTCGA 58.713 39.130 0.00 0.00 0.00 3.71
5803 11789 3.121362 GCAAATCTTTTGCTTCCGTTTCG 60.121 43.478 15.71 0.00 41.87 3.46
5804 11790 3.184379 GGCAAATCTTTTGCTTCCGTTTC 59.816 43.478 20.56 2.45 44.36 2.78
5805 11791 3.130633 GGCAAATCTTTTGCTTCCGTTT 58.869 40.909 20.56 0.00 44.36 3.60
5806 11792 2.365293 AGGCAAATCTTTTGCTTCCGTT 59.635 40.909 20.56 2.43 44.36 4.44
5807 11793 1.963515 AGGCAAATCTTTTGCTTCCGT 59.036 42.857 20.56 2.95 44.36 4.69
5808 11794 2.030007 TGAGGCAAATCTTTTGCTTCCG 60.030 45.455 24.89 0.00 46.74 4.30
5809 11795 3.665745 TGAGGCAAATCTTTTGCTTCC 57.334 42.857 24.89 14.96 46.74 3.46
5811 11797 3.579586 TGGATGAGGCAAATCTTTTGCTT 59.420 39.130 20.56 15.26 44.36 3.91
5812 11798 3.167485 TGGATGAGGCAAATCTTTTGCT 58.833 40.909 20.56 9.75 44.36 3.91
5813 11799 3.598019 TGGATGAGGCAAATCTTTTGC 57.402 42.857 14.88 14.88 44.22 3.68
5814 11800 8.726870 ATTTAATGGATGAGGCAAATCTTTTG 57.273 30.769 0.00 0.00 0.00 2.44
5817 11803 9.425248 TCTTATTTAATGGATGAGGCAAATCTT 57.575 29.630 0.00 0.00 0.00 2.40
5818 11804 9.425248 TTCTTATTTAATGGATGAGGCAAATCT 57.575 29.630 0.00 0.00 0.00 2.40
5821 11807 9.874205 CTTTTCTTATTTAATGGATGAGGCAAA 57.126 29.630 0.00 0.00 0.00 3.68
5822 11808 9.253832 TCTTTTCTTATTTAATGGATGAGGCAA 57.746 29.630 0.00 0.00 0.00 4.52
5823 11809 8.821686 TCTTTTCTTATTTAATGGATGAGGCA 57.178 30.769 0.00 0.00 0.00 4.75
5845 11831 9.614792 ACTTGTAAACTGTCAAACTCTATTCTT 57.385 29.630 0.00 0.00 0.00 2.52
5846 11832 9.046296 CACTTGTAAACTGTCAAACTCTATTCT 57.954 33.333 0.00 0.00 0.00 2.40
5847 11833 9.042008 TCACTTGTAAACTGTCAAACTCTATTC 57.958 33.333 0.00 0.00 0.00 1.75
5848 11834 8.827677 GTCACTTGTAAACTGTCAAACTCTATT 58.172 33.333 0.00 0.00 0.00 1.73
5849 11835 7.441458 GGTCACTTGTAAACTGTCAAACTCTAT 59.559 37.037 0.00 0.00 0.00 1.98
5850 11836 6.759827 GGTCACTTGTAAACTGTCAAACTCTA 59.240 38.462 0.00 0.00 0.00 2.43
5851 11837 5.585047 GGTCACTTGTAAACTGTCAAACTCT 59.415 40.000 0.00 0.00 0.00 3.24
5852 11838 5.220796 GGGTCACTTGTAAACTGTCAAACTC 60.221 44.000 0.00 0.00 0.00 3.01
5853 11839 4.638865 GGGTCACTTGTAAACTGTCAAACT 59.361 41.667 0.00 0.00 0.00 2.66
5854 11840 4.638865 AGGGTCACTTGTAAACTGTCAAAC 59.361 41.667 0.00 0.00 0.00 2.93
5855 11841 4.850680 AGGGTCACTTGTAAACTGTCAAA 58.149 39.130 0.00 0.00 0.00 2.69
5856 11842 4.497291 AGGGTCACTTGTAAACTGTCAA 57.503 40.909 0.00 0.00 0.00 3.18
5857 11843 5.818678 ATAGGGTCACTTGTAAACTGTCA 57.181 39.130 0.00 0.00 0.00 3.58
5858 11844 8.788325 ATTTATAGGGTCACTTGTAAACTGTC 57.212 34.615 0.00 0.00 0.00 3.51
5864 11850 9.895138 GAGGTTTATTTATAGGGTCACTTGTAA 57.105 33.333 0.00 0.00 0.00 2.41
5865 11851 9.275572 AGAGGTTTATTTATAGGGTCACTTGTA 57.724 33.333 0.00 0.00 0.00 2.41
5866 11852 8.159229 AGAGGTTTATTTATAGGGTCACTTGT 57.841 34.615 0.00 0.00 0.00 3.16
5867 11853 7.438459 CGAGAGGTTTATTTATAGGGTCACTTG 59.562 40.741 0.00 0.00 0.00 3.16
5868 11854 7.125356 ACGAGAGGTTTATTTATAGGGTCACTT 59.875 37.037 0.00 0.00 0.00 3.16
5869 11855 6.610425 ACGAGAGGTTTATTTATAGGGTCACT 59.390 38.462 0.00 0.00 0.00 3.41
5870 11856 6.814043 ACGAGAGGTTTATTTATAGGGTCAC 58.186 40.000 0.00 0.00 0.00 3.67
5871 11857 7.560991 TGTACGAGAGGTTTATTTATAGGGTCA 59.439 37.037 0.00 0.00 0.00 4.02
5872 11858 7.945134 TGTACGAGAGGTTTATTTATAGGGTC 58.055 38.462 0.00 0.00 0.00 4.46
5873 11859 7.902920 TGTACGAGAGGTTTATTTATAGGGT 57.097 36.000 0.00 0.00 0.00 4.34
5874 11860 8.199449 TGTTGTACGAGAGGTTTATTTATAGGG 58.801 37.037 0.00 0.00 0.00 3.53
5875 11861 9.590451 TTGTTGTACGAGAGGTTTATTTATAGG 57.410 33.333 0.00 0.00 0.00 2.57
5890 11876 7.680587 ACCTATGGGCGTATTGTTGTACGAG 62.681 48.000 10.27 0.00 46.74 4.18
5891 11877 5.946553 ACCTATGGGCGTATTGTTGTACGA 61.947 45.833 10.27 0.00 46.74 3.43
5893 11879 3.800531 ACCTATGGGCGTATTGTTGTAC 58.199 45.455 0.00 0.00 35.63 2.90
5894 11880 4.193090 CAACCTATGGGCGTATTGTTGTA 58.807 43.478 0.00 0.00 35.63 2.41
5895 11881 3.013921 CAACCTATGGGCGTATTGTTGT 58.986 45.455 0.00 0.00 35.63 3.32
5896 11882 2.357637 CCAACCTATGGGCGTATTGTTG 59.642 50.000 0.00 0.00 46.27 3.33
5897 11883 2.650322 CCAACCTATGGGCGTATTGTT 58.350 47.619 0.00 0.00 46.27 2.83
5898 11884 2.341846 CCAACCTATGGGCGTATTGT 57.658 50.000 0.00 0.00 46.27 2.71
5910 11896 8.008187 CAAAATATTTTGCTTGAGGCCAACCTA 61.008 37.037 24.00 0.00 42.95 3.08
5911 11897 7.242269 CAAAATATTTTGCTTGAGGCCAACCT 61.242 38.462 24.00 0.00 44.36 3.50
5912 11898 3.893326 ATATTTTGCTTGAGGCCAACC 57.107 42.857 5.01 0.00 40.92 3.77
5913 11899 5.700373 TCAAAATATTTTGCTTGAGGCCAAC 59.300 36.000 28.54 0.00 45.35 3.77
5914 11900 5.862845 TCAAAATATTTTGCTTGAGGCCAA 58.137 33.333 28.54 10.63 45.35 4.52
5915 11901 5.480642 TCAAAATATTTTGCTTGAGGCCA 57.519 34.783 28.54 11.24 45.35 5.36
5916 11902 6.165577 TCTTCAAAATATTTTGCTTGAGGCC 58.834 36.000 28.54 0.00 45.35 5.19
5917 11903 7.599998 TCTTCTTCAAAATATTTTGCTTGAGGC 59.400 33.333 28.54 0.00 45.35 4.70
5918 11904 9.480053 TTCTTCTTCAAAATATTTTGCTTGAGG 57.520 29.630 28.54 23.64 45.35 3.86
5923 11909 9.591792 GCCTATTCTTCTTCAAAATATTTTGCT 57.408 29.630 28.54 12.24 45.35 3.91
5924 11910 8.534778 CGCCTATTCTTCTTCAAAATATTTTGC 58.465 33.333 28.54 15.24 45.35 3.68
5925 11911 9.023967 CCGCCTATTCTTCTTCAAAATATTTTG 57.976 33.333 27.80 27.80 46.70 2.44
5926 11912 8.749354 ACCGCCTATTCTTCTTCAAAATATTTT 58.251 29.630 7.64 7.64 0.00 1.82
5927 11913 8.190784 CACCGCCTATTCTTCTTCAAAATATTT 58.809 33.333 0.00 0.00 0.00 1.40
5928 11914 7.201821 CCACCGCCTATTCTTCTTCAAAATATT 60.202 37.037 0.00 0.00 0.00 1.28
5929 11915 6.263168 CCACCGCCTATTCTTCTTCAAAATAT 59.737 38.462 0.00 0.00 0.00 1.28
5930 11916 5.588648 CCACCGCCTATTCTTCTTCAAAATA 59.411 40.000 0.00 0.00 0.00 1.40
5931 11917 4.399303 CCACCGCCTATTCTTCTTCAAAAT 59.601 41.667 0.00 0.00 0.00 1.82
5932 11918 3.756434 CCACCGCCTATTCTTCTTCAAAA 59.244 43.478 0.00 0.00 0.00 2.44
5933 11919 3.343617 CCACCGCCTATTCTTCTTCAAA 58.656 45.455 0.00 0.00 0.00 2.69
5934 11920 2.939640 GCCACCGCCTATTCTTCTTCAA 60.940 50.000 0.00 0.00 0.00 2.69
5935 11921 1.406887 GCCACCGCCTATTCTTCTTCA 60.407 52.381 0.00 0.00 0.00 3.02
5936 11922 1.300481 GCCACCGCCTATTCTTCTTC 58.700 55.000 0.00 0.00 0.00 2.87
5937 11923 0.462047 CGCCACCGCCTATTCTTCTT 60.462 55.000 0.00 0.00 0.00 2.52
5938 11924 1.144057 CGCCACCGCCTATTCTTCT 59.856 57.895 0.00 0.00 0.00 2.85
5939 11925 3.719214 CGCCACCGCCTATTCTTC 58.281 61.111 0.00 0.00 0.00 2.87
5949 11935 2.353376 CACAAAAGTGCGCCACCG 60.353 61.111 4.18 0.00 34.49 4.94
5950 11936 2.027460 CCACAAAAGTGCGCCACC 59.973 61.111 4.18 0.00 34.49 4.61
5951 11937 2.658268 GCCACAAAAGTGCGCCAC 60.658 61.111 4.18 3.02 34.10 5.01
5952 11938 4.263209 CGCCACAAAAGTGCGCCA 62.263 61.111 4.18 0.00 41.95 5.69
5956 11942 0.920664 GTGTTTCGCCACAAAAGTGC 59.079 50.000 0.00 0.00 35.38 4.40
5957 11943 1.555477 GGTGTTTCGCCACAAAAGTG 58.445 50.000 0.00 0.00 37.06 3.16
5958 11944 0.458260 GGGTGTTTCGCCACAAAAGT 59.542 50.000 1.84 0.00 37.06 2.66
5959 11945 0.593773 CGGGTGTTTCGCCACAAAAG 60.594 55.000 1.84 0.00 37.06 2.27
5960 11946 1.433879 CGGGTGTTTCGCCACAAAA 59.566 52.632 1.84 0.00 37.06 2.44
5961 11947 2.482333 CCGGGTGTTTCGCCACAAA 61.482 57.895 0.00 0.00 37.06 2.83
5962 11948 2.902846 CCGGGTGTTTCGCCACAA 60.903 61.111 0.00 0.00 37.06 3.33
5963 11949 3.862991 TCCGGGTGTTTCGCCACA 61.863 61.111 0.00 0.00 37.06 4.17
5964 11950 3.351416 GTCCGGGTGTTTCGCCAC 61.351 66.667 0.00 0.00 35.42 5.01
5965 11951 4.973055 CGTCCGGGTGTTTCGCCA 62.973 66.667 0.00 0.00 35.42 5.69
5966 11952 4.974989 ACGTCCGGGTGTTTCGCC 62.975 66.667 0.00 0.00 0.00 5.54
5967 11953 2.434225 GAAACGTCCGGGTGTTTCGC 62.434 60.000 25.89 13.00 42.94 4.70
5968 11954 1.566077 GAAACGTCCGGGTGTTTCG 59.434 57.895 25.89 14.21 42.94 3.46
5970 11956 0.466963 AGAGAAACGTCCGGGTGTTT 59.533 50.000 20.27 20.27 40.77 2.83
5971 11957 0.033090 GAGAGAAACGTCCGGGTGTT 59.967 55.000 0.00 3.68 0.00 3.32
5972 11958 1.111116 TGAGAGAAACGTCCGGGTGT 61.111 55.000 0.00 0.00 0.00 4.16
5973 11959 0.246635 ATGAGAGAAACGTCCGGGTG 59.753 55.000 0.00 0.00 0.00 4.61
5974 11960 0.974383 AATGAGAGAAACGTCCGGGT 59.026 50.000 0.00 0.00 0.00 5.28
5975 11961 1.641577 GAATGAGAGAAACGTCCGGG 58.358 55.000 0.00 0.00 0.00 5.73
5976 11962 1.067142 TGGAATGAGAGAAACGTCCGG 60.067 52.381 0.00 0.00 0.00 5.14
5977 11963 2.363788 TGGAATGAGAGAAACGTCCG 57.636 50.000 0.00 0.00 0.00 4.79
5978 11964 4.315803 TCTTTGGAATGAGAGAAACGTCC 58.684 43.478 0.00 0.00 0.00 4.79
5979 11965 4.991687 ACTCTTTGGAATGAGAGAAACGTC 59.008 41.667 7.32 0.00 41.49 4.34
5980 11966 4.962155 ACTCTTTGGAATGAGAGAAACGT 58.038 39.130 7.32 0.00 41.49 3.99
5981 11967 4.390297 GGACTCTTTGGAATGAGAGAAACG 59.610 45.833 7.32 0.00 41.49 3.60
5982 11968 5.308825 TGGACTCTTTGGAATGAGAGAAAC 58.691 41.667 7.32 0.00 41.49 2.78
5983 11969 5.567037 TGGACTCTTTGGAATGAGAGAAA 57.433 39.130 7.32 0.00 41.49 2.52
5984 11970 5.307976 TCTTGGACTCTTTGGAATGAGAGAA 59.692 40.000 7.32 0.00 41.49 2.87
5985 11971 4.840680 TCTTGGACTCTTTGGAATGAGAGA 59.159 41.667 7.32 0.31 41.49 3.10
5986 11972 5.046735 TCTCTTGGACTCTTTGGAATGAGAG 60.047 44.000 8.78 0.00 43.90 3.20
5987 11973 4.840680 TCTCTTGGACTCTTTGGAATGAGA 59.159 41.667 8.78 0.00 35.05 3.27
5988 11974 4.934602 GTCTCTTGGACTCTTTGGAATGAG 59.065 45.833 0.00 0.00 41.46 2.90
5989 11975 4.561530 CGTCTCTTGGACTCTTTGGAATGA 60.562 45.833 0.00 0.00 42.44 2.57
5990 11976 3.681897 CGTCTCTTGGACTCTTTGGAATG 59.318 47.826 0.00 0.00 42.44 2.67
5991 11977 3.931578 CGTCTCTTGGACTCTTTGGAAT 58.068 45.455 0.00 0.00 42.44 3.01
5992 11978 3.386768 CGTCTCTTGGACTCTTTGGAA 57.613 47.619 0.00 0.00 42.44 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.