Multiple sequence alignment - TraesCS5A01G375900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G375900 chr5A 100.000 4569 0 0 1 4569 573677162 573672594 0.000000e+00 8438.0
1 TraesCS5A01G375900 chr5A 85.333 150 16 3 4413 4560 534367064 534367209 2.850000e-32 150.0
2 TraesCS5A01G375900 chr5A 87.912 91 6 3 810 895 573755006 573754916 8.090000e-18 102.0
3 TraesCS5A01G375900 chr5B 95.447 2921 113 9 807 3720 556296226 556293319 0.000000e+00 4639.0
4 TraesCS5A01G375900 chr5B 87.636 550 51 8 3957 4491 556293321 556292774 1.400000e-174 623.0
5 TraesCS5A01G375900 chr5B 97.925 241 5 0 3719 3959 166549466 166549226 7.070000e-113 418.0
6 TraesCS5A01G375900 chr5B 92.174 115 8 1 4413 4526 507032382 507032496 1.320000e-35 161.0
7 TraesCS5A01G375900 chr5B 91.781 73 4 2 4490 4560 556292534 556292462 2.910000e-17 100.0
8 TraesCS5A01G375900 chr5B 94.118 51 3 0 828 878 556947212 556947162 1.360000e-10 78.7
9 TraesCS5A01G375900 chr5D 95.919 2720 100 4 890 3602 454732476 454729761 0.000000e+00 4397.0
10 TraesCS5A01G375900 chr5D 90.554 307 23 6 4256 4560 454729188 454728886 7.120000e-108 401.0
11 TraesCS5A01G375900 chr5D 88.444 225 17 5 3966 4182 454729486 454729263 3.510000e-66 263.0
12 TraesCS5A01G375900 chr5D 86.111 144 14 3 4413 4554 420932502 420932641 2.850000e-32 150.0
13 TraesCS5A01G375900 chr1D 94.337 618 34 1 1 617 445203517 445202900 0.000000e+00 946.0
14 TraesCS5A01G375900 chr2D 94.013 618 36 1 1 617 495048472 495049089 0.000000e+00 935.0
15 TraesCS5A01G375900 chr2D 93.851 618 37 1 1 617 65570228 65570845 0.000000e+00 929.0
16 TraesCS5A01G375900 chr7D 93.881 621 34 4 1 617 173191351 173190731 0.000000e+00 933.0
17 TraesCS5A01G375900 chr7D 93.881 621 34 4 1 617 544981276 544980656 0.000000e+00 933.0
18 TraesCS5A01G375900 chr7D 93.689 618 38 1 1 617 229348521 229349138 0.000000e+00 924.0
19 TraesCS5A01G375900 chr4D 93.871 620 35 3 1 617 361593219 361593838 0.000000e+00 931.0
20 TraesCS5A01G375900 chr4D 93.689 618 38 1 1 617 468976702 468976085 0.000000e+00 924.0
21 TraesCS5A01G375900 chr4D 97.934 242 5 0 3719 3960 32130003 32130244 1.970000e-113 420.0
22 TraesCS5A01G375900 chr3D 93.710 620 36 3 1 617 375686426 375685807 0.000000e+00 926.0
23 TraesCS5A01G375900 chr7A 97.992 249 3 2 3716 3963 212185812 212186059 9.080000e-117 431.0
24 TraesCS5A01G375900 chr4A 98.367 245 4 0 3719 3963 547044573 547044329 9.080000e-117 431.0
25 TraesCS5A01G375900 chr1A 97.934 242 5 0 3719 3960 364223412 364223653 1.970000e-113 420.0
26 TraesCS5A01G375900 chrUn 96.774 248 7 1 3714 3960 88028347 88028100 3.290000e-111 412.0
27 TraesCS5A01G375900 chrUn 92.174 115 8 1 4413 4526 204162393 204162279 1.320000e-35 161.0
28 TraesCS5A01G375900 chr4B 96.774 248 7 1 3713 3959 660198824 660198577 3.290000e-111 412.0
29 TraesCS5A01G375900 chr2B 94.961 258 13 0 3718 3975 636213372 636213629 5.500000e-109 405.0
30 TraesCS5A01G375900 chr1B 94.961 258 11 2 3712 3968 644610847 644611103 1.980000e-108 403.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G375900 chr5A 573672594 573677162 4568 True 8438.000000 8438 100.000000 1 4569 1 chr5A.!!$R1 4568
1 TraesCS5A01G375900 chr5B 556292462 556296226 3764 True 1787.333333 4639 91.621333 807 4560 3 chr5B.!!$R3 3753
2 TraesCS5A01G375900 chr5D 454728886 454732476 3590 True 1687.000000 4397 91.639000 890 4560 3 chr5D.!!$R1 3670
3 TraesCS5A01G375900 chr1D 445202900 445203517 617 True 946.000000 946 94.337000 1 617 1 chr1D.!!$R1 616
4 TraesCS5A01G375900 chr2D 495048472 495049089 617 False 935.000000 935 94.013000 1 617 1 chr2D.!!$F2 616
5 TraesCS5A01G375900 chr2D 65570228 65570845 617 False 929.000000 929 93.851000 1 617 1 chr2D.!!$F1 616
6 TraesCS5A01G375900 chr7D 173190731 173191351 620 True 933.000000 933 93.881000 1 617 1 chr7D.!!$R1 616
7 TraesCS5A01G375900 chr7D 544980656 544981276 620 True 933.000000 933 93.881000 1 617 1 chr7D.!!$R2 616
8 TraesCS5A01G375900 chr7D 229348521 229349138 617 False 924.000000 924 93.689000 1 617 1 chr7D.!!$F1 616
9 TraesCS5A01G375900 chr4D 361593219 361593838 619 False 931.000000 931 93.871000 1 617 1 chr4D.!!$F2 616
10 TraesCS5A01G375900 chr4D 468976085 468976702 617 True 924.000000 924 93.689000 1 617 1 chr4D.!!$R1 616
11 TraesCS5A01G375900 chr3D 375685807 375686426 619 True 926.000000 926 93.710000 1 617 1 chr3D.!!$R1 616


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
720 726 0.039617 CGACATCGCTCATCTCCCTC 60.040 60.0 0.0 0.0 0.00 4.30 F
1241 1252 0.032615 ACGAGAAGATCTCCCAGGCT 60.033 55.0 0.0 0.0 40.34 4.58 F
1562 1573 0.457851 CGTCATCGGAAGGAGCTTCT 59.542 55.0 0.0 0.0 40.07 2.85 F
1823 1834 0.768221 TCACCCCAACCAGAGAGCTT 60.768 55.0 0.0 0.0 0.00 3.74 F
3056 3067 0.595095 GCAGAAAGTTGGAGGCACAG 59.405 55.0 0.0 0.0 0.00 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1686 1697 0.036010 GCACTGCCGCATATATCCCT 60.036 55.000 0.0 0.0 0.00 4.20 R
3053 3064 0.179000 CCTCTAGCATTTCCCGCTGT 59.821 55.000 0.0 0.0 40.73 4.40 R
3056 3067 0.250081 CCTCCTCTAGCATTTCCCGC 60.250 60.000 0.0 0.0 0.00 6.13 R
3240 3254 1.680249 CCTAGTCTGGCCCTTTTCAGC 60.680 57.143 0.0 0.0 0.00 4.26 R
4093 4277 0.108520 CATGCCCAAATGCCACAGAC 60.109 55.000 0.0 0.0 0.00 3.51 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 9.175312 TCTCTTTACTCGTTCAGTAATACATCT 57.825 33.333 0.00 0.00 45.34 2.90
83 85 6.322201 AGTTACAATGCTTGCAAGGCTTATAT 59.678 34.615 27.10 7.01 0.00 0.86
116 118 0.468214 CGAGAGGGCCCAGAGATACA 60.468 60.000 27.56 0.00 0.00 2.29
350 353 4.430007 ACGATCAAATGCTAAGCTAACGA 58.570 39.130 0.00 0.00 0.00 3.85
354 357 7.223971 ACGATCAAATGCTAAGCTAACGAAATA 59.776 33.333 0.00 0.00 0.00 1.40
362 365 5.276915 GCTAAGCTAACGAAATAGGTCAAGC 60.277 44.000 0.00 4.31 36.26 4.01
411 415 4.944962 TCCTGTTAATCAAATGACAGCG 57.055 40.909 0.00 0.00 38.48 5.18
427 431 2.893489 ACAGCGCATGTCTATGGATAGA 59.107 45.455 11.47 0.00 37.75 1.98
463 467 7.347508 TCTTTAATTCAACGAGCTAGTCAAC 57.652 36.000 0.00 0.00 0.00 3.18
509 513 9.586435 CTCTGTTTGTCTATGTATTCACACATA 57.414 33.333 0.00 0.00 39.77 2.29
618 624 6.874288 CCTCTAGGGCATATTTTCTTCAAG 57.126 41.667 0.00 0.00 0.00 3.02
619 625 6.595682 CCTCTAGGGCATATTTTCTTCAAGA 58.404 40.000 0.00 0.00 0.00 3.02
620 626 6.709846 CCTCTAGGGCATATTTTCTTCAAGAG 59.290 42.308 0.00 0.00 0.00 2.85
621 627 6.058183 TCTAGGGCATATTTTCTTCAAGAGC 58.942 40.000 0.00 0.00 0.00 4.09
622 628 3.629398 AGGGCATATTTTCTTCAAGAGCG 59.371 43.478 0.00 0.00 0.00 5.03
623 629 3.627577 GGGCATATTTTCTTCAAGAGCGA 59.372 43.478 0.00 0.00 0.00 4.93
624 630 4.496507 GGGCATATTTTCTTCAAGAGCGAC 60.497 45.833 0.00 0.00 0.00 5.19
625 631 4.094887 GGCATATTTTCTTCAAGAGCGACA 59.905 41.667 0.00 0.00 0.00 4.35
626 632 5.024555 GCATATTTTCTTCAAGAGCGACAC 58.975 41.667 0.00 0.00 0.00 3.67
627 633 5.163814 GCATATTTTCTTCAAGAGCGACACT 60.164 40.000 0.00 0.00 0.00 3.55
628 634 6.036083 GCATATTTTCTTCAAGAGCGACACTA 59.964 38.462 0.00 0.00 0.00 2.74
629 635 7.413000 GCATATTTTCTTCAAGAGCGACACTAA 60.413 37.037 0.00 0.00 0.00 2.24
630 636 5.907197 TTTTCTTCAAGAGCGACACTAAG 57.093 39.130 0.00 0.00 0.00 2.18
631 637 2.947852 TCTTCAAGAGCGACACTAAGC 58.052 47.619 0.00 0.00 0.00 3.09
632 638 1.651138 CTTCAAGAGCGACACTAAGCG 59.349 52.381 0.00 0.00 38.61 4.68
633 639 0.596577 TCAAGAGCGACACTAAGCGT 59.403 50.000 0.00 0.00 38.61 5.07
634 640 0.985549 CAAGAGCGACACTAAGCGTC 59.014 55.000 0.00 0.00 38.61 5.19
639 645 4.834828 GACACTAAGCGTCGTCGT 57.165 55.556 3.66 0.00 39.49 4.34
640 646 2.337101 GACACTAAGCGTCGTCGTG 58.663 57.895 3.66 0.00 39.49 4.35
641 647 1.662845 GACACTAAGCGTCGTCGTGC 61.663 60.000 3.66 4.43 39.49 5.34
642 648 2.126580 ACTAAGCGTCGTCGTGCC 60.127 61.111 3.66 0.00 39.49 5.01
643 649 3.238241 CTAAGCGTCGTCGTGCCG 61.238 66.667 3.66 3.60 39.49 5.69
644 650 3.656243 CTAAGCGTCGTCGTGCCGA 62.656 63.158 3.66 0.00 39.49 5.54
645 651 3.252665 TAAGCGTCGTCGTGCCGAA 62.253 57.895 3.66 0.00 38.80 4.30
646 652 2.531927 TAAGCGTCGTCGTGCCGAAT 62.532 55.000 3.66 0.00 38.80 3.34
647 653 3.898640 GCGTCGTCGTGCCGAATC 61.899 66.667 3.66 0.00 38.80 2.52
648 654 3.245315 CGTCGTCGTGCCGAATCC 61.245 66.667 0.00 0.00 38.80 3.01
649 655 2.126228 GTCGTCGTGCCGAATCCA 60.126 61.111 0.00 0.00 38.80 3.41
650 656 2.126228 TCGTCGTGCCGAATCCAC 60.126 61.111 0.00 0.00 37.72 4.02
651 657 2.431771 CGTCGTGCCGAATCCACA 60.432 61.111 0.00 0.00 37.72 4.17
652 658 2.024868 CGTCGTGCCGAATCCACAA 61.025 57.895 0.00 0.00 37.72 3.33
653 659 1.495951 GTCGTGCCGAATCCACAAC 59.504 57.895 0.00 0.00 37.72 3.32
654 660 2.024868 TCGTGCCGAATCCACAACG 61.025 57.895 0.00 0.00 31.06 4.10
655 661 2.024868 CGTGCCGAATCCACAACGA 61.025 57.895 0.00 0.00 32.85 3.85
656 662 1.561717 CGTGCCGAATCCACAACGAA 61.562 55.000 0.00 0.00 32.85 3.85
657 663 0.110373 GTGCCGAATCCACAACGAAC 60.110 55.000 0.00 0.00 33.50 3.95
658 664 0.533085 TGCCGAATCCACAACGAACA 60.533 50.000 0.00 0.00 0.00 3.18
659 665 0.589223 GCCGAATCCACAACGAACAA 59.411 50.000 0.00 0.00 0.00 2.83
660 666 1.002251 GCCGAATCCACAACGAACAAA 60.002 47.619 0.00 0.00 0.00 2.83
661 667 2.916111 CCGAATCCACAACGAACAAAG 58.084 47.619 0.00 0.00 0.00 2.77
662 668 2.350388 CCGAATCCACAACGAACAAAGG 60.350 50.000 0.00 0.00 0.00 3.11
663 669 2.289547 CGAATCCACAACGAACAAAGGT 59.710 45.455 0.00 0.00 0.00 3.50
664 670 3.242936 CGAATCCACAACGAACAAAGGTT 60.243 43.478 0.00 0.00 40.76 3.50
665 671 4.678622 GAATCCACAACGAACAAAGGTTT 58.321 39.130 0.00 0.00 37.36 3.27
666 672 3.768468 TCCACAACGAACAAAGGTTTC 57.232 42.857 0.00 0.00 37.36 2.78
667 673 3.082548 TCCACAACGAACAAAGGTTTCA 58.917 40.909 0.00 0.00 37.36 2.69
668 674 3.506455 TCCACAACGAACAAAGGTTTCAA 59.494 39.130 0.00 0.00 37.36 2.69
669 675 3.610677 CCACAACGAACAAAGGTTTCAAC 59.389 43.478 0.00 0.00 37.36 3.18
681 687 2.913777 GTTTCAACCGGAAGCCATAC 57.086 50.000 9.46 0.00 36.72 2.39
682 688 2.156098 GTTTCAACCGGAAGCCATACA 58.844 47.619 9.46 0.00 36.72 2.29
683 689 1.816074 TTCAACCGGAAGCCATACAC 58.184 50.000 9.46 0.00 0.00 2.90
684 690 0.390603 TCAACCGGAAGCCATACACG 60.391 55.000 9.46 0.00 0.00 4.49
687 693 4.420143 CGGAAGCCATACACGGAG 57.580 61.111 0.00 0.00 0.00 4.63
688 694 1.813859 CGGAAGCCATACACGGAGA 59.186 57.895 0.00 0.00 0.00 3.71
689 695 0.249073 CGGAAGCCATACACGGAGAG 60.249 60.000 0.00 0.00 0.00 3.20
690 696 0.105039 GGAAGCCATACACGGAGAGG 59.895 60.000 0.00 0.00 0.00 3.69
691 697 1.112113 GAAGCCATACACGGAGAGGA 58.888 55.000 0.00 0.00 0.00 3.71
692 698 1.067821 GAAGCCATACACGGAGAGGAG 59.932 57.143 0.00 0.00 0.00 3.69
693 699 1.068250 GCCATACACGGAGAGGAGC 59.932 63.158 0.00 0.00 0.00 4.70
694 700 1.676678 GCCATACACGGAGAGGAGCA 61.677 60.000 0.00 0.00 0.00 4.26
695 701 1.043816 CCATACACGGAGAGGAGCAT 58.956 55.000 0.00 0.00 0.00 3.79
696 702 1.000283 CCATACACGGAGAGGAGCATC 60.000 57.143 0.00 0.00 0.00 3.91
697 703 1.683385 CATACACGGAGAGGAGCATCA 59.317 52.381 0.00 0.00 36.25 3.07
698 704 1.103803 TACACGGAGAGGAGCATCAC 58.896 55.000 0.00 0.00 36.25 3.06
699 705 1.226802 CACGGAGAGGAGCATCACG 60.227 63.158 0.00 0.00 36.25 4.35
700 706 1.378646 ACGGAGAGGAGCATCACGA 60.379 57.895 0.00 0.00 36.25 4.35
701 707 1.064946 CGGAGAGGAGCATCACGAC 59.935 63.158 0.00 0.00 36.25 4.34
702 708 1.064946 GGAGAGGAGCATCACGACG 59.935 63.158 0.00 0.00 36.25 5.12
703 709 1.377366 GGAGAGGAGCATCACGACGA 61.377 60.000 0.00 0.00 36.25 4.20
704 710 0.248296 GAGAGGAGCATCACGACGAC 60.248 60.000 0.00 0.00 36.25 4.34
705 711 0.960861 AGAGGAGCATCACGACGACA 60.961 55.000 0.00 0.00 36.25 4.35
706 712 0.101399 GAGGAGCATCACGACGACAT 59.899 55.000 0.00 0.00 36.25 3.06
707 713 0.101399 AGGAGCATCACGACGACATC 59.899 55.000 0.00 0.00 36.25 3.06
716 722 2.777109 CGACGACATCGCTCATCTC 58.223 57.895 0.14 0.00 45.52 2.75
717 723 0.658829 CGACGACATCGCTCATCTCC 60.659 60.000 0.14 0.00 45.52 3.71
718 724 0.318275 GACGACATCGCTCATCTCCC 60.318 60.000 0.14 0.00 44.43 4.30
719 725 0.753479 ACGACATCGCTCATCTCCCT 60.753 55.000 0.14 0.00 44.43 4.20
720 726 0.039617 CGACATCGCTCATCTCCCTC 60.040 60.000 0.00 0.00 0.00 4.30
721 727 0.039617 GACATCGCTCATCTCCCTCG 60.040 60.000 0.00 0.00 0.00 4.63
722 728 0.753479 ACATCGCTCATCTCCCTCGT 60.753 55.000 0.00 0.00 0.00 4.18
723 729 0.318529 CATCGCTCATCTCCCTCGTG 60.319 60.000 0.00 0.00 0.00 4.35
724 730 0.753479 ATCGCTCATCTCCCTCGTGT 60.753 55.000 0.00 0.00 0.00 4.49
725 731 1.064946 CGCTCATCTCCCTCGTGTC 59.935 63.158 0.00 0.00 0.00 3.67
726 732 1.064946 GCTCATCTCCCTCGTGTCG 59.935 63.158 0.00 0.00 0.00 4.35
727 733 1.658686 GCTCATCTCCCTCGTGTCGT 61.659 60.000 0.00 0.00 0.00 4.34
728 734 0.099613 CTCATCTCCCTCGTGTCGTG 59.900 60.000 0.00 0.00 0.00 4.35
729 735 0.322187 TCATCTCCCTCGTGTCGTGA 60.322 55.000 0.00 0.00 0.00 4.35
730 736 0.099613 CATCTCCCTCGTGTCGTGAG 59.900 60.000 0.00 0.00 0.00 3.51
731 737 1.658686 ATCTCCCTCGTGTCGTGAGC 61.659 60.000 0.00 0.00 31.98 4.26
732 738 2.282251 TCCCTCGTGTCGTGAGCT 60.282 61.111 0.00 0.00 31.98 4.09
733 739 1.002990 TCCCTCGTGTCGTGAGCTA 60.003 57.895 0.00 0.00 31.98 3.32
734 740 1.136984 CCCTCGTGTCGTGAGCTAC 59.863 63.158 0.00 0.00 31.98 3.58
735 741 1.583495 CCCTCGTGTCGTGAGCTACA 61.583 60.000 0.00 0.00 31.98 2.74
736 742 0.240145 CCTCGTGTCGTGAGCTACAA 59.760 55.000 0.00 0.00 31.98 2.41
737 743 1.328439 CTCGTGTCGTGAGCTACAAC 58.672 55.000 0.00 0.00 0.00 3.32
738 744 0.664224 TCGTGTCGTGAGCTACAACA 59.336 50.000 0.00 0.00 0.00 3.33
739 745 1.053048 CGTGTCGTGAGCTACAACAG 58.947 55.000 0.00 0.00 0.00 3.16
740 746 1.334689 CGTGTCGTGAGCTACAACAGA 60.335 52.381 0.00 0.00 0.00 3.41
741 747 2.668556 CGTGTCGTGAGCTACAACAGAT 60.669 50.000 0.00 0.00 0.00 2.90
742 748 3.318017 GTGTCGTGAGCTACAACAGATT 58.682 45.455 0.00 0.00 0.00 2.40
743 749 3.741344 GTGTCGTGAGCTACAACAGATTT 59.259 43.478 0.00 0.00 0.00 2.17
744 750 4.921515 GTGTCGTGAGCTACAACAGATTTA 59.078 41.667 0.00 0.00 0.00 1.40
745 751 5.577164 GTGTCGTGAGCTACAACAGATTTAT 59.423 40.000 0.00 0.00 0.00 1.40
746 752 5.576774 TGTCGTGAGCTACAACAGATTTATG 59.423 40.000 0.00 0.00 0.00 1.90
747 753 5.805486 GTCGTGAGCTACAACAGATTTATGA 59.195 40.000 0.00 0.00 0.00 2.15
748 754 6.310467 GTCGTGAGCTACAACAGATTTATGAA 59.690 38.462 0.00 0.00 0.00 2.57
749 755 6.531594 TCGTGAGCTACAACAGATTTATGAAG 59.468 38.462 0.00 0.00 0.00 3.02
750 756 6.237942 CGTGAGCTACAACAGATTTATGAAGG 60.238 42.308 0.00 0.00 0.00 3.46
751 757 6.037610 GTGAGCTACAACAGATTTATGAAGGG 59.962 42.308 0.00 0.00 0.00 3.95
752 758 5.440610 AGCTACAACAGATTTATGAAGGGG 58.559 41.667 0.00 0.00 0.00 4.79
753 759 5.044846 AGCTACAACAGATTTATGAAGGGGT 60.045 40.000 0.00 0.00 0.00 4.95
754 760 5.066505 GCTACAACAGATTTATGAAGGGGTG 59.933 44.000 0.00 0.00 0.00 4.61
755 761 4.998051 ACAACAGATTTATGAAGGGGTGT 58.002 39.130 0.00 0.00 0.00 4.16
756 762 5.010282 ACAACAGATTTATGAAGGGGTGTC 58.990 41.667 0.00 0.00 0.00 3.67
757 763 4.927267 ACAGATTTATGAAGGGGTGTCA 57.073 40.909 0.00 0.00 0.00 3.58
758 764 4.589908 ACAGATTTATGAAGGGGTGTCAC 58.410 43.478 0.00 0.00 0.00 3.67
759 765 3.623060 CAGATTTATGAAGGGGTGTCACG 59.377 47.826 0.00 0.00 0.00 4.35
760 766 3.263425 AGATTTATGAAGGGGTGTCACGT 59.737 43.478 0.00 0.00 0.00 4.49
761 767 2.754946 TTATGAAGGGGTGTCACGTC 57.245 50.000 0.00 0.00 0.00 4.34
762 768 1.933021 TATGAAGGGGTGTCACGTCT 58.067 50.000 0.00 0.00 0.00 4.18
763 769 0.321671 ATGAAGGGGTGTCACGTCTG 59.678 55.000 0.00 0.00 0.00 3.51
764 770 1.004918 GAAGGGGTGTCACGTCTGG 60.005 63.158 0.00 0.00 0.00 3.86
765 771 1.755393 GAAGGGGTGTCACGTCTGGT 61.755 60.000 0.00 0.00 0.00 4.00
767 773 2.030562 GGGTGTCACGTCTGGTGG 59.969 66.667 0.00 0.00 46.96 4.61
768 774 2.803817 GGGTGTCACGTCTGGTGGT 61.804 63.158 0.00 0.00 46.96 4.16
769 775 1.594293 GGTGTCACGTCTGGTGGTG 60.594 63.158 0.00 0.00 46.96 4.17
770 776 1.594293 GTGTCACGTCTGGTGGTGG 60.594 63.158 0.00 0.00 46.96 4.61
771 777 2.665185 GTCACGTCTGGTGGTGGC 60.665 66.667 0.00 0.00 46.96 5.01
772 778 3.157949 TCACGTCTGGTGGTGGCA 61.158 61.111 0.00 0.00 46.96 4.92
773 779 2.203139 CACGTCTGGTGGTGGCAA 60.203 61.111 0.00 0.00 43.16 4.52
774 780 2.111043 ACGTCTGGTGGTGGCAAG 59.889 61.111 0.00 0.00 0.00 4.01
775 781 2.669569 CGTCTGGTGGTGGCAAGG 60.670 66.667 0.00 0.00 0.00 3.61
776 782 2.515901 GTCTGGTGGTGGCAAGGT 59.484 61.111 0.00 0.00 0.00 3.50
777 783 1.600916 GTCTGGTGGTGGCAAGGTC 60.601 63.158 0.00 0.00 0.00 3.85
778 784 2.075566 TCTGGTGGTGGCAAGGTCA 61.076 57.895 0.00 0.00 0.00 4.02
779 785 1.898574 CTGGTGGTGGCAAGGTCAC 60.899 63.158 0.00 0.00 37.44 3.67
780 786 2.978010 GGTGGTGGCAAGGTCACG 60.978 66.667 0.00 0.00 39.27 4.35
781 787 2.203153 GTGGTGGCAAGGTCACGT 60.203 61.111 0.00 0.00 39.27 4.49
782 788 2.203139 TGGTGGCAAGGTCACGTG 60.203 61.111 9.94 9.94 39.27 4.49
783 789 2.978010 GGTGGCAAGGTCACGTGG 60.978 66.667 17.00 0.00 39.27 4.94
786 792 3.357079 GGCAAGGTCACGTGGCTG 61.357 66.667 21.13 12.62 45.64 4.85
787 793 2.591715 GCAAGGTCACGTGGCTGT 60.592 61.111 21.13 4.80 0.00 4.40
788 794 1.301401 GCAAGGTCACGTGGCTGTA 60.301 57.895 21.13 0.00 0.00 2.74
789 795 1.291877 GCAAGGTCACGTGGCTGTAG 61.292 60.000 21.13 8.92 0.00 2.74
790 796 0.670546 CAAGGTCACGTGGCTGTAGG 60.671 60.000 21.13 1.86 0.00 3.18
791 797 0.830444 AAGGTCACGTGGCTGTAGGA 60.830 55.000 21.13 0.00 0.00 2.94
792 798 0.614979 AGGTCACGTGGCTGTAGGAT 60.615 55.000 21.13 0.00 0.00 3.24
793 799 0.179108 GGTCACGTGGCTGTAGGATC 60.179 60.000 21.13 0.00 0.00 3.36
794 800 0.525668 GTCACGTGGCTGTAGGATCG 60.526 60.000 14.12 0.00 0.00 3.69
795 801 1.226974 CACGTGGCTGTAGGATCGG 60.227 63.158 7.95 0.00 0.00 4.18
796 802 2.279517 CGTGGCTGTAGGATCGGC 60.280 66.667 0.00 0.00 38.81 5.54
797 803 2.786495 CGTGGCTGTAGGATCGGCT 61.786 63.158 0.00 0.00 39.41 5.52
798 804 1.522569 GTGGCTGTAGGATCGGCTT 59.477 57.895 0.00 0.00 39.41 4.35
799 805 0.107654 GTGGCTGTAGGATCGGCTTT 60.108 55.000 0.00 0.00 39.41 3.51
800 806 0.107703 TGGCTGTAGGATCGGCTTTG 60.108 55.000 0.00 0.00 39.41 2.77
801 807 0.178068 GGCTGTAGGATCGGCTTTGA 59.822 55.000 0.00 0.00 39.41 2.69
802 808 1.291132 GCTGTAGGATCGGCTTTGAC 58.709 55.000 0.00 0.00 36.83 3.18
803 809 1.405526 GCTGTAGGATCGGCTTTGACA 60.406 52.381 0.00 0.00 36.83 3.58
804 810 2.743183 GCTGTAGGATCGGCTTTGACAT 60.743 50.000 0.00 0.00 36.83 3.06
805 811 3.535561 CTGTAGGATCGGCTTTGACATT 58.464 45.455 0.00 0.00 0.00 2.71
871 878 1.611519 CGGGTAAACAGGCCTTCAAA 58.388 50.000 0.00 0.00 0.00 2.69
896 903 1.729838 GATCGCGTGGGCTCGTATC 60.730 63.158 5.77 0.00 36.88 2.24
897 904 2.131294 GATCGCGTGGGCTCGTATCT 62.131 60.000 5.77 0.00 36.88 1.98
970 977 2.363018 AGCGCTCCTGCTGGACTA 60.363 61.111 2.64 0.00 45.28 2.59
982 989 0.392595 CTGGACTAAAACCCTCGCCC 60.393 60.000 0.00 0.00 0.00 6.13
1022 1029 3.192922 CGCCGCCGGAAAACCTAG 61.193 66.667 7.68 0.00 0.00 3.02
1054 1065 3.940506 CTCCCTCCGTCTCCCGTGT 62.941 68.421 0.00 0.00 33.66 4.49
1241 1252 0.032615 ACGAGAAGATCTCCCAGGCT 60.033 55.000 0.00 0.00 40.34 4.58
1298 1309 1.525077 CGAGGACGAGGAGGAGGAG 60.525 68.421 0.00 0.00 42.66 3.69
1376 1387 0.534203 AGGACGAGATCGAGGAGAGC 60.534 60.000 9.58 0.00 43.02 4.09
1378 1389 1.837538 GACGAGATCGAGGAGAGCGG 61.838 65.000 9.58 0.00 40.85 5.52
1441 1452 1.301716 GTGAAGTGGAAGCTGGCGA 60.302 57.895 0.00 0.00 0.00 5.54
1462 1473 2.972819 AAGGCGAAGGGGAAGAGGC 61.973 63.158 0.00 0.00 0.00 4.70
1465 1476 4.162690 CGAAGGGGAAGAGGCGGG 62.163 72.222 0.00 0.00 0.00 6.13
1466 1477 3.798511 GAAGGGGAAGAGGCGGGG 61.799 72.222 0.00 0.00 0.00 5.73
1511 1522 0.737367 TGCAAGAGGAAGACGATGCG 60.737 55.000 0.00 0.00 36.62 4.73
1541 1552 2.906354 CCGGATCCGTCTCAATTCTTT 58.094 47.619 31.22 0.00 37.81 2.52
1562 1573 0.457851 CGTCATCGGAAGGAGCTTCT 59.542 55.000 0.00 0.00 40.07 2.85
1565 1576 3.339141 GTCATCGGAAGGAGCTTCTTTT 58.661 45.455 9.14 0.00 40.07 2.27
1686 1697 0.918983 CCCTCTGGCATTAACAGGGA 59.081 55.000 9.04 0.00 46.23 4.20
1691 1702 1.496429 CTGGCATTAACAGGGAGGGAT 59.504 52.381 0.00 0.00 32.38 3.85
1703 1714 0.905357 GGAGGGATATATGCGGCAGT 59.095 55.000 9.25 2.13 0.00 4.40
1745 1756 1.299321 GGCTGCTTTCTCTCTGCCT 59.701 57.895 0.00 0.00 42.01 4.75
1823 1834 0.768221 TCACCCCAACCAGAGAGCTT 60.768 55.000 0.00 0.00 0.00 3.74
1892 1903 5.600069 TGATATCAGGTGCTGTCTCATAGTT 59.400 40.000 0.00 0.00 32.61 2.24
2022 2033 2.163211 GGGCTTGAAGATCTTGCAGTTC 59.837 50.000 14.00 0.00 0.00 3.01
2084 2095 3.565482 TCAGTGTTGAAATTGGTGAGCTC 59.435 43.478 6.82 6.82 0.00 4.09
2150 2161 3.425359 CCACAATGACAGAGCAAATCGAC 60.425 47.826 0.00 0.00 0.00 4.20
2517 2528 5.049336 CGTGGTATTGACATTGTTGGTGTTA 60.049 40.000 0.00 0.00 0.00 2.41
2642 2653 7.237209 TGTTACTGATGATGATAGATCCCTG 57.763 40.000 0.00 0.00 0.00 4.45
2750 2761 2.751259 TGAGCAACTGGAGCATCAAATC 59.249 45.455 0.00 0.00 36.25 2.17
2900 2911 5.760253 TGCTACTGAGAAGGAAAAGAAACTG 59.240 40.000 0.00 0.00 0.00 3.16
2945 2956 3.193479 CCTTGGATCAAGTTAAAGGTGGC 59.807 47.826 6.86 0.00 39.58 5.01
3020 3031 5.546526 AGAAGAAGAGAGCGTGAGAAAAAT 58.453 37.500 0.00 0.00 0.00 1.82
3044 3055 2.275318 CCTAGGAAGAAGCGCAGAAAG 58.725 52.381 11.47 0.00 0.00 2.62
3053 3064 2.260869 GCGCAGAAAGTTGGAGGCA 61.261 57.895 0.30 0.00 0.00 4.75
3056 3067 0.595095 GCAGAAAGTTGGAGGCACAG 59.405 55.000 0.00 0.00 0.00 3.66
3062 3073 3.565214 TTGGAGGCACAGCGGGAA 61.565 61.111 0.00 0.00 0.00 3.97
3068 3079 1.748879 GGCACAGCGGGAAATGCTA 60.749 57.895 0.00 0.00 41.72 3.49
3190 3204 0.965363 ATGAAGGCGACGGGCAAAAT 60.965 50.000 0.00 0.00 46.16 1.82
3240 3254 2.294512 GAGAAAGGGTCAAAACAGCCTG 59.705 50.000 0.00 0.00 43.85 4.85
3254 3268 2.643232 GCCTGCTGAAAAGGGCCAG 61.643 63.158 6.18 0.00 38.77 4.85
3257 3271 0.251077 CTGCTGAAAAGGGCCAGACT 60.251 55.000 6.18 0.00 32.37 3.24
3337 3351 3.251004 CGTTCCCTGAAGAAAAAGGACAG 59.749 47.826 0.00 0.00 35.40 3.51
3363 3377 7.201299 GCTCGTTTGCAAAGAAATCTAAGAATG 60.201 37.037 13.26 0.00 0.00 2.67
3445 3459 2.535485 TATCACAACTGGGCGGGCAG 62.535 60.000 3.27 1.76 0.00 4.85
3576 3590 7.669427 TGGCATTGTTCTGAAATTATCTTGTT 58.331 30.769 0.00 0.00 0.00 2.83
3707 3885 8.356000 TCAGGTTTTTAAAGTTTCCTTTCAGA 57.644 30.769 0.00 0.00 41.18 3.27
3731 3909 4.635699 TTTTCTTGTACTCCCTCCTTCC 57.364 45.455 0.00 0.00 0.00 3.46
3732 3910 3.269592 TTCTTGTACTCCCTCCTTCCA 57.730 47.619 0.00 0.00 0.00 3.53
3733 3911 3.491766 TCTTGTACTCCCTCCTTCCAT 57.508 47.619 0.00 0.00 0.00 3.41
3734 3912 3.375699 TCTTGTACTCCCTCCTTCCATC 58.624 50.000 0.00 0.00 0.00 3.51
3735 3913 3.012959 TCTTGTACTCCCTCCTTCCATCT 59.987 47.826 0.00 0.00 0.00 2.90
3736 3914 4.232122 TCTTGTACTCCCTCCTTCCATCTA 59.768 45.833 0.00 0.00 0.00 1.98
3737 3915 4.834406 TGTACTCCCTCCTTCCATCTAT 57.166 45.455 0.00 0.00 0.00 1.98
3738 3916 5.942977 TGTACTCCCTCCTTCCATCTATA 57.057 43.478 0.00 0.00 0.00 1.31
3739 3917 6.485388 TGTACTCCCTCCTTCCATCTATAT 57.515 41.667 0.00 0.00 0.00 0.86
3740 3918 7.599353 TGTACTCCCTCCTTCCATCTATATA 57.401 40.000 0.00 0.00 0.00 0.86
3741 3919 7.644062 TGTACTCCCTCCTTCCATCTATATAG 58.356 42.308 3.10 3.10 0.00 1.31
3742 3920 6.098716 ACTCCCTCCTTCCATCTATATAGG 57.901 45.833 9.89 0.00 0.00 2.57
3743 3921 5.042979 ACTCCCTCCTTCCATCTATATAGGG 60.043 48.000 9.89 4.49 43.23 3.53
3744 3922 3.970640 CCCTCCTTCCATCTATATAGGGC 59.029 52.174 9.89 0.00 36.30 5.19
3745 3923 3.970640 CCTCCTTCCATCTATATAGGGCC 59.029 52.174 9.89 0.00 0.00 5.80
3746 3924 4.327332 CCTCCTTCCATCTATATAGGGCCT 60.327 50.000 12.58 12.58 0.00 5.19
3747 3925 5.103043 CCTCCTTCCATCTATATAGGGCCTA 60.103 48.000 17.16 17.16 0.00 3.93
3748 3926 6.432190 TCCTTCCATCTATATAGGGCCTAA 57.568 41.667 18.91 7.61 0.00 2.69
3749 3927 7.009960 TCCTTCCATCTATATAGGGCCTAAT 57.990 40.000 18.91 14.19 0.00 1.73
3750 3928 6.846505 TCCTTCCATCTATATAGGGCCTAATG 59.153 42.308 18.91 15.42 0.00 1.90
3751 3929 6.465035 CCTTCCATCTATATAGGGCCTAATGC 60.465 46.154 18.91 0.00 40.16 3.56
3752 3930 4.588951 TCCATCTATATAGGGCCTAATGCG 59.411 45.833 18.91 10.04 42.61 4.73
3753 3931 4.345257 CCATCTATATAGGGCCTAATGCGT 59.655 45.833 18.91 2.76 42.61 5.24
3754 3932 5.163301 CCATCTATATAGGGCCTAATGCGTT 60.163 44.000 18.91 1.94 42.61 4.84
3755 3933 6.349300 CATCTATATAGGGCCTAATGCGTTT 58.651 40.000 18.91 1.12 42.61 3.60
3756 3934 6.368779 TCTATATAGGGCCTAATGCGTTTT 57.631 37.500 18.91 0.30 42.61 2.43
3757 3935 6.775708 TCTATATAGGGCCTAATGCGTTTTT 58.224 36.000 18.91 0.00 42.61 1.94
3758 3936 5.959618 ATATAGGGCCTAATGCGTTTTTC 57.040 39.130 18.91 0.00 42.61 2.29
3759 3937 1.917872 AGGGCCTAATGCGTTTTTCA 58.082 45.000 2.82 0.00 42.61 2.69
3760 3938 2.243810 AGGGCCTAATGCGTTTTTCAA 58.756 42.857 2.82 0.00 42.61 2.69
3761 3939 2.231235 AGGGCCTAATGCGTTTTTCAAG 59.769 45.455 2.82 0.00 42.61 3.02
3762 3940 2.606108 GGCCTAATGCGTTTTTCAAGG 58.394 47.619 0.00 0.00 42.61 3.61
3763 3941 1.992667 GCCTAATGCGTTTTTCAAGGC 59.007 47.619 12.47 12.47 42.98 4.35
3764 3942 2.352715 GCCTAATGCGTTTTTCAAGGCT 60.353 45.455 18.31 0.00 43.70 4.58
3765 3943 3.119637 GCCTAATGCGTTTTTCAAGGCTA 60.120 43.478 18.31 0.00 43.70 3.93
3766 3944 4.617298 GCCTAATGCGTTTTTCAAGGCTAA 60.617 41.667 18.31 0.00 43.70 3.09
3767 3945 4.857037 CCTAATGCGTTTTTCAAGGCTAAC 59.143 41.667 0.00 0.00 43.07 2.34
3768 3946 4.584327 AATGCGTTTTTCAAGGCTAACT 57.416 36.364 0.00 0.00 43.07 2.24
3769 3947 4.584327 ATGCGTTTTTCAAGGCTAACTT 57.416 36.364 0.00 0.00 43.07 2.66
3770 3948 4.379339 TGCGTTTTTCAAGGCTAACTTT 57.621 36.364 0.00 0.00 43.07 2.66
3771 3949 4.109050 TGCGTTTTTCAAGGCTAACTTTG 58.891 39.130 0.00 0.00 43.07 2.77
3772 3950 4.142359 TGCGTTTTTCAAGGCTAACTTTGA 60.142 37.500 0.00 0.00 43.07 2.69
3773 3951 4.206404 GCGTTTTTCAAGGCTAACTTTGAC 59.794 41.667 0.00 0.00 40.10 3.18
3774 3952 4.738252 CGTTTTTCAAGGCTAACTTTGACC 59.262 41.667 0.00 0.00 37.29 4.02
3775 3953 5.656480 GTTTTTCAAGGCTAACTTTGACCA 58.344 37.500 0.00 0.00 37.29 4.02
3776 3954 5.923733 TTTTCAAGGCTAACTTTGACCAA 57.076 34.783 0.00 0.00 37.29 3.67
3777 3955 5.923733 TTTCAAGGCTAACTTTGACCAAA 57.076 34.783 0.00 0.00 37.29 3.28
3778 3956 6.478512 TTTCAAGGCTAACTTTGACCAAAT 57.521 33.333 0.00 0.00 37.29 2.32
3779 3957 7.589958 TTTCAAGGCTAACTTTGACCAAATA 57.410 32.000 0.00 0.00 37.29 1.40
3780 3958 7.775053 TTCAAGGCTAACTTTGACCAAATAT 57.225 32.000 0.00 0.00 37.29 1.28
3781 3959 7.775053 TCAAGGCTAACTTTGACCAAATATT 57.225 32.000 0.00 0.00 37.29 1.28
3782 3960 8.871629 TCAAGGCTAACTTTGACCAAATATTA 57.128 30.769 0.00 0.00 37.29 0.98
3783 3961 8.956426 TCAAGGCTAACTTTGACCAAATATTAG 58.044 33.333 15.32 15.32 37.29 1.73
3784 3962 8.956426 CAAGGCTAACTTTGACCAAATATTAGA 58.044 33.333 19.82 0.15 37.29 2.10
3785 3963 8.738645 AGGCTAACTTTGACCAAATATTAGAG 57.261 34.615 19.82 7.39 34.31 2.43
3786 3964 7.283354 AGGCTAACTTTGACCAAATATTAGAGC 59.717 37.037 19.82 13.12 34.31 4.09
3787 3965 7.283354 GGCTAACTTTGACCAAATATTAGAGCT 59.717 37.037 19.82 0.00 34.31 4.09
3788 3966 9.326413 GCTAACTTTGACCAAATATTAGAGCTA 57.674 33.333 19.82 0.00 34.31 3.32
3817 3995 3.963665 TGACATGCAACTTACACAAAGC 58.036 40.909 0.00 0.00 38.93 3.51
3818 3996 3.379688 TGACATGCAACTTACACAAAGCA 59.620 39.130 0.00 0.00 38.93 3.91
3819 3997 3.705604 ACATGCAACTTACACAAAGCAC 58.294 40.909 0.00 0.00 38.93 4.40
3820 3998 3.130164 ACATGCAACTTACACAAAGCACA 59.870 39.130 0.00 0.00 38.93 4.57
3821 3999 3.143807 TGCAACTTACACAAAGCACAC 57.856 42.857 0.00 0.00 38.93 3.82
3822 4000 2.159310 TGCAACTTACACAAAGCACACC 60.159 45.455 0.00 0.00 38.93 4.16
3823 4001 2.715268 CAACTTACACAAAGCACACCG 58.285 47.619 0.00 0.00 38.93 4.94
3824 4002 2.032680 ACTTACACAAAGCACACCGT 57.967 45.000 0.00 0.00 38.93 4.83
3825 4003 2.361789 ACTTACACAAAGCACACCGTT 58.638 42.857 0.00 0.00 38.93 4.44
3826 4004 3.533547 ACTTACACAAAGCACACCGTTA 58.466 40.909 0.00 0.00 38.93 3.18
3827 4005 3.940221 ACTTACACAAAGCACACCGTTAA 59.060 39.130 0.00 0.00 38.93 2.01
3828 4006 4.395542 ACTTACACAAAGCACACCGTTAAA 59.604 37.500 0.00 0.00 38.93 1.52
3829 4007 5.066764 ACTTACACAAAGCACACCGTTAAAT 59.933 36.000 0.00 0.00 38.93 1.40
3830 4008 4.379339 ACACAAAGCACACCGTTAAATT 57.621 36.364 0.00 0.00 0.00 1.82
3831 4009 4.356289 ACACAAAGCACACCGTTAAATTC 58.644 39.130 0.00 0.00 0.00 2.17
3832 4010 3.420576 CACAAAGCACACCGTTAAATTCG 59.579 43.478 0.00 0.00 0.00 3.34
3833 4011 3.065648 ACAAAGCACACCGTTAAATTCGT 59.934 39.130 0.00 0.00 0.00 3.85
3834 4012 2.961522 AGCACACCGTTAAATTCGTG 57.038 45.000 0.00 0.00 0.00 4.35
3835 4013 2.215196 AGCACACCGTTAAATTCGTGT 58.785 42.857 0.00 0.00 0.00 4.49
3836 4014 2.032377 AGCACACCGTTAAATTCGTGTG 60.032 45.455 13.39 13.39 40.02 3.82
3837 4015 2.286536 GCACACCGTTAAATTCGTGTGT 60.287 45.455 17.54 12.66 40.37 3.72
3838 4016 3.284914 CACACCGTTAAATTCGTGTGTG 58.715 45.455 17.05 17.05 44.50 3.82
3839 4017 3.196463 ACACCGTTAAATTCGTGTGTGA 58.804 40.909 9.71 0.00 39.31 3.58
3840 4018 3.622163 ACACCGTTAAATTCGTGTGTGAA 59.378 39.130 9.71 0.00 39.31 3.18
3841 4019 4.094590 ACACCGTTAAATTCGTGTGTGAAA 59.905 37.500 9.71 0.00 39.31 2.69
3842 4020 4.668837 CACCGTTAAATTCGTGTGTGAAAG 59.331 41.667 0.00 0.00 0.00 2.62
3843 4021 4.215965 CCGTTAAATTCGTGTGTGAAAGG 58.784 43.478 0.00 0.00 0.00 3.11
3844 4022 4.024725 CCGTTAAATTCGTGTGTGAAAGGA 60.025 41.667 0.00 0.00 0.00 3.36
3845 4023 5.137403 CGTTAAATTCGTGTGTGAAAGGAG 58.863 41.667 0.00 0.00 0.00 3.69
3846 4024 3.626028 AAATTCGTGTGTGAAAGGAGC 57.374 42.857 0.00 0.00 0.00 4.70
3847 4025 2.550830 ATTCGTGTGTGAAAGGAGCT 57.449 45.000 0.00 0.00 0.00 4.09
3848 4026 2.325583 TTCGTGTGTGAAAGGAGCTT 57.674 45.000 0.00 0.00 0.00 3.74
3849 4027 2.325583 TCGTGTGTGAAAGGAGCTTT 57.674 45.000 0.00 0.00 36.29 3.51
3850 4028 2.210116 TCGTGTGTGAAAGGAGCTTTC 58.790 47.619 0.00 0.00 46.88 2.62
3912 4090 5.490139 AATCATGTCAATAGTCAAAGGCG 57.510 39.130 0.00 0.00 0.00 5.52
3913 4091 3.270027 TCATGTCAATAGTCAAAGGCGG 58.730 45.455 0.00 0.00 0.00 6.13
3914 4092 2.851263 TGTCAATAGTCAAAGGCGGT 57.149 45.000 0.00 0.00 0.00 5.68
3915 4093 2.695359 TGTCAATAGTCAAAGGCGGTC 58.305 47.619 0.00 0.00 0.00 4.79
3916 4094 2.301870 TGTCAATAGTCAAAGGCGGTCT 59.698 45.455 0.00 0.00 0.00 3.85
3917 4095 3.244422 TGTCAATAGTCAAAGGCGGTCTT 60.244 43.478 0.00 0.00 37.28 3.01
3918 4096 4.020928 TGTCAATAGTCAAAGGCGGTCTTA 60.021 41.667 0.00 0.00 34.78 2.10
3919 4097 4.933400 GTCAATAGTCAAAGGCGGTCTTAA 59.067 41.667 0.00 0.00 34.78 1.85
3920 4098 5.410439 GTCAATAGTCAAAGGCGGTCTTAAA 59.590 40.000 0.00 0.00 34.78 1.52
3921 4099 5.998981 TCAATAGTCAAAGGCGGTCTTAAAA 59.001 36.000 0.00 0.00 34.78 1.52
3922 4100 6.487331 TCAATAGTCAAAGGCGGTCTTAAAAA 59.513 34.615 0.00 0.00 34.78 1.94
3945 4123 8.757982 AAAATGCATTAGGCCCTATATAGATG 57.242 34.615 13.39 6.87 43.89 2.90
3946 4124 5.894298 TGCATTAGGCCCTATATAGATGG 57.106 43.478 11.53 6.04 43.89 3.51
3947 4125 5.537914 TGCATTAGGCCCTATATAGATGGA 58.462 41.667 11.53 4.41 43.89 3.41
3948 4126 5.970021 TGCATTAGGCCCTATATAGATGGAA 59.030 40.000 11.53 0.00 43.89 3.53
3949 4127 6.100279 TGCATTAGGCCCTATATAGATGGAAG 59.900 42.308 11.53 0.00 43.89 3.46
3950 4128 6.465035 GCATTAGGCCCTATATAGATGGAAGG 60.465 46.154 11.53 3.94 36.11 3.46
3951 4129 4.994411 AGGCCCTATATAGATGGAAGGA 57.006 45.455 11.53 0.00 0.00 3.36
3952 4130 5.305675 AGGCCCTATATAGATGGAAGGAA 57.694 43.478 11.53 0.00 0.00 3.36
3953 4131 5.284582 AGGCCCTATATAGATGGAAGGAAG 58.715 45.833 11.53 0.00 0.00 3.46
3954 4132 4.410555 GGCCCTATATAGATGGAAGGAAGG 59.589 50.000 11.53 1.18 0.00 3.46
3955 4133 5.281314 GCCCTATATAGATGGAAGGAAGGA 58.719 45.833 11.53 0.00 0.00 3.36
3956 4134 5.365314 GCCCTATATAGATGGAAGGAAGGAG 59.635 48.000 11.53 0.00 0.00 3.69
3957 4135 6.507568 CCCTATATAGATGGAAGGAAGGAGT 58.492 44.000 11.53 0.00 0.00 3.85
3958 4136 7.653503 CCCTATATAGATGGAAGGAAGGAGTA 58.346 42.308 11.53 0.00 0.00 2.59
4007 4187 8.385898 TCCTGTTAATTTCATAACACTTCGTT 57.614 30.769 0.00 0.00 40.03 3.85
4044 4228 3.332485 GGGCCTGGTATTGGGTATATTCA 59.668 47.826 0.84 0.00 0.00 2.57
4048 4232 6.157994 GGCCTGGTATTGGGTATATTCATCTA 59.842 42.308 0.00 0.00 0.00 1.98
4061 4245 9.153479 GGTATATTCATCTAGGCTGAATATCCT 57.847 37.037 27.15 16.88 46.13 3.24
4093 4277 3.244976 GTTTGGTTGATCTTGGCATTCG 58.755 45.455 0.00 0.00 0.00 3.34
4129 4317 0.251832 ATGATATCGAGACCCGCCCT 60.252 55.000 0.00 0.00 38.37 5.19
4134 4322 3.382832 CGAGACCCGCCCTGAAGT 61.383 66.667 0.00 0.00 0.00 3.01
4206 4395 2.455565 CCTCCCATCCCCGCTTGAT 61.456 63.158 0.00 0.00 0.00 2.57
4218 4407 0.249657 CGCTTGATACAGGAGGCCTC 60.250 60.000 25.59 25.59 0.00 4.70
4277 4472 2.270527 GCCTTCCTCCTGTCCAGC 59.729 66.667 0.00 0.00 0.00 4.85
4279 4474 2.581354 CTTCCTCCTGTCCAGCGG 59.419 66.667 0.00 0.00 0.00 5.52
4315 4510 4.468868 TGCTTGATCTCTCATCTTTCTCCA 59.531 41.667 0.00 0.00 0.00 3.86
4353 4548 4.200092 GGCCGAGATTAAGAAGACCAATT 58.800 43.478 0.00 0.00 0.00 2.32
4369 4564 0.460311 AATTGCGACCTCTACCTCGG 59.540 55.000 0.00 0.00 0.00 4.63
4370 4565 1.392710 ATTGCGACCTCTACCTCGGG 61.393 60.000 0.00 0.00 0.00 5.14
4403 4599 2.488952 TGCTGTCGTGATTACTGCAAA 58.511 42.857 5.47 0.00 45.18 3.68
4436 4632 4.035091 TGCTGTCAAGTGTGTATTGTGTTC 59.965 41.667 0.00 0.00 0.00 3.18
4493 4930 8.375506 TGATACAACTATATTTCCAAGCTAGGG 58.624 37.037 0.00 0.00 0.00 3.53
4499 4936 6.789959 ACTATATTTCCAAGCTAGGGATCTGT 59.210 38.462 7.79 1.05 33.63 3.41
4560 4999 5.728351 TTTTCTTGTGTTCCTAACTCGTG 57.272 39.130 0.00 0.00 0.00 4.35
4561 5000 4.395959 TTCTTGTGTTCCTAACTCGTGT 57.604 40.909 0.00 0.00 0.00 4.49
4562 5001 4.395959 TCTTGTGTTCCTAACTCGTGTT 57.604 40.909 8.09 8.09 39.98 3.32
4563 5002 4.761975 TCTTGTGTTCCTAACTCGTGTTT 58.238 39.130 8.32 0.00 37.59 2.83
4564 5003 5.180271 TCTTGTGTTCCTAACTCGTGTTTT 58.820 37.500 8.32 0.00 37.59 2.43
4565 5004 5.292589 TCTTGTGTTCCTAACTCGTGTTTTC 59.707 40.000 8.32 0.00 37.59 2.29
4566 5005 4.761975 TGTGTTCCTAACTCGTGTTTTCT 58.238 39.130 8.32 0.00 37.59 2.52
4567 5006 5.904941 TGTGTTCCTAACTCGTGTTTTCTA 58.095 37.500 8.32 0.00 37.59 2.10
4568 5007 5.981315 TGTGTTCCTAACTCGTGTTTTCTAG 59.019 40.000 8.32 0.00 37.59 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.608268 GAGTAAAGAGACTTGCCGGTC 58.392 52.381 1.90 0.00 36.56 4.79
83 85 2.419990 CCCTCTCGGTAATGCACATCAA 60.420 50.000 0.00 0.00 0.00 2.57
220 222 2.248280 TGTGTGCTACCAAACGTCAT 57.752 45.000 0.00 0.00 31.47 3.06
324 327 7.063662 TCGTTAGCTTAGCATTTGATCGTTTAA 59.936 33.333 7.07 0.00 0.00 1.52
350 353 5.263599 TGATGTGATTGGCTTGACCTATTT 58.736 37.500 0.00 0.00 40.22 1.40
354 357 2.885135 TGATGTGATTGGCTTGACCT 57.115 45.000 0.00 0.00 40.22 3.85
411 415 8.560374 GGTTAAGTTTTCTATCCATAGACATGC 58.440 37.037 0.00 0.00 39.00 4.06
444 448 6.268825 TCTAGTTGACTAGCTCGTTGAATT 57.731 37.500 12.30 0.00 44.24 2.17
463 467 5.238432 CAGAGTGTCACTAGTATGCCTCTAG 59.762 48.000 5.21 0.00 40.23 2.43
622 628 1.662845 GCACGACGACGCTTAGTGTC 61.663 60.000 15.21 15.21 43.96 3.67
623 629 1.728426 GCACGACGACGCTTAGTGT 60.728 57.895 7.30 0.00 43.96 3.55
624 630 2.434134 GGCACGACGACGCTTAGTG 61.434 63.158 7.30 1.47 43.96 2.74
625 631 2.126580 GGCACGACGACGCTTAGT 60.127 61.111 7.30 0.00 43.96 2.24
638 644 0.110373 GTTCGTTGTGGATTCGGCAC 60.110 55.000 0.00 0.00 0.00 5.01
639 645 0.533085 TGTTCGTTGTGGATTCGGCA 60.533 50.000 0.00 0.00 0.00 5.69
640 646 0.589223 TTGTTCGTTGTGGATTCGGC 59.411 50.000 0.00 0.00 0.00 5.54
641 647 2.350388 CCTTTGTTCGTTGTGGATTCGG 60.350 50.000 0.00 0.00 0.00 4.30
642 648 2.289547 ACCTTTGTTCGTTGTGGATTCG 59.710 45.455 0.00 0.00 0.00 3.34
643 649 3.982576 ACCTTTGTTCGTTGTGGATTC 57.017 42.857 0.00 0.00 0.00 2.52
644 650 4.158764 TGAAACCTTTGTTCGTTGTGGATT 59.841 37.500 0.00 0.00 32.15 3.01
645 651 3.697045 TGAAACCTTTGTTCGTTGTGGAT 59.303 39.130 0.00 0.00 32.15 3.41
646 652 3.082548 TGAAACCTTTGTTCGTTGTGGA 58.917 40.909 0.00 0.00 32.15 4.02
647 653 3.495670 TGAAACCTTTGTTCGTTGTGG 57.504 42.857 0.00 0.00 32.15 4.17
648 654 3.610677 GGTTGAAACCTTTGTTCGTTGTG 59.389 43.478 4.92 0.00 45.75 3.33
649 655 3.840468 GGTTGAAACCTTTGTTCGTTGT 58.160 40.909 4.92 0.00 45.75 3.32
661 667 1.471287 GTATGGCTTCCGGTTGAAACC 59.529 52.381 0.00 1.88 45.76 3.27
662 668 2.095415 GTGTATGGCTTCCGGTTGAAAC 60.095 50.000 0.00 0.00 31.06 2.78
663 669 2.156098 GTGTATGGCTTCCGGTTGAAA 58.844 47.619 0.00 0.00 31.06 2.69
664 670 1.816074 GTGTATGGCTTCCGGTTGAA 58.184 50.000 0.00 0.00 0.00 2.69
665 671 0.390603 CGTGTATGGCTTCCGGTTGA 60.391 55.000 0.00 0.00 0.00 3.18
666 672 1.366111 CCGTGTATGGCTTCCGGTTG 61.366 60.000 0.00 0.00 34.10 3.77
667 673 1.078708 CCGTGTATGGCTTCCGGTT 60.079 57.895 0.00 0.00 34.10 4.44
668 674 1.956629 CTCCGTGTATGGCTTCCGGT 61.957 60.000 0.00 0.00 39.62 5.28
669 675 1.227263 CTCCGTGTATGGCTTCCGG 60.227 63.158 0.00 0.00 39.98 5.14
670 676 0.249073 CTCTCCGTGTATGGCTTCCG 60.249 60.000 0.00 0.00 0.00 4.30
671 677 0.105039 CCTCTCCGTGTATGGCTTCC 59.895 60.000 0.00 0.00 0.00 3.46
672 678 1.067821 CTCCTCTCCGTGTATGGCTTC 59.932 57.143 0.00 0.00 0.00 3.86
673 679 1.115467 CTCCTCTCCGTGTATGGCTT 58.885 55.000 0.00 0.00 0.00 4.35
674 680 1.395826 GCTCCTCTCCGTGTATGGCT 61.396 60.000 0.00 0.00 0.00 4.75
675 681 1.068250 GCTCCTCTCCGTGTATGGC 59.932 63.158 0.00 0.00 0.00 4.40
676 682 1.000283 GATGCTCCTCTCCGTGTATGG 60.000 57.143 0.00 0.00 0.00 2.74
677 683 1.683385 TGATGCTCCTCTCCGTGTATG 59.317 52.381 0.00 0.00 0.00 2.39
678 684 1.683917 GTGATGCTCCTCTCCGTGTAT 59.316 52.381 0.00 0.00 0.00 2.29
679 685 1.103803 GTGATGCTCCTCTCCGTGTA 58.896 55.000 0.00 0.00 0.00 2.90
680 686 1.893786 GTGATGCTCCTCTCCGTGT 59.106 57.895 0.00 0.00 0.00 4.49
681 687 1.226802 CGTGATGCTCCTCTCCGTG 60.227 63.158 0.00 0.00 0.00 4.94
682 688 1.378646 TCGTGATGCTCCTCTCCGT 60.379 57.895 0.00 0.00 0.00 4.69
683 689 1.064946 GTCGTGATGCTCCTCTCCG 59.935 63.158 0.00 0.00 0.00 4.63
684 690 1.064946 CGTCGTGATGCTCCTCTCC 59.935 63.158 0.00 0.00 0.00 3.71
685 691 0.248296 GTCGTCGTGATGCTCCTCTC 60.248 60.000 0.00 0.00 0.00 3.20
686 692 0.960861 TGTCGTCGTGATGCTCCTCT 60.961 55.000 0.00 0.00 0.00 3.69
687 693 0.101399 ATGTCGTCGTGATGCTCCTC 59.899 55.000 0.00 0.00 0.00 3.71
688 694 0.101399 GATGTCGTCGTGATGCTCCT 59.899 55.000 0.00 0.00 0.00 3.69
689 695 1.202973 CGATGTCGTCGTGATGCTCC 61.203 60.000 6.28 0.00 45.19 4.70
690 696 2.199152 CGATGTCGTCGTGATGCTC 58.801 57.895 6.28 0.00 45.19 4.26
691 697 4.384485 CGATGTCGTCGTGATGCT 57.616 55.556 6.28 0.00 45.19 3.79
699 705 0.318275 GGGAGATGAGCGATGTCGTC 60.318 60.000 4.20 1.92 42.22 4.20
700 706 0.753479 AGGGAGATGAGCGATGTCGT 60.753 55.000 4.20 0.00 42.22 4.34
701 707 0.039617 GAGGGAGATGAGCGATGTCG 60.040 60.000 0.00 0.00 43.27 4.35
702 708 0.039617 CGAGGGAGATGAGCGATGTC 60.040 60.000 0.00 0.00 0.00 3.06
703 709 0.753479 ACGAGGGAGATGAGCGATGT 60.753 55.000 0.00 0.00 0.00 3.06
704 710 0.318529 CACGAGGGAGATGAGCGATG 60.319 60.000 0.00 0.00 0.00 3.84
705 711 0.753479 ACACGAGGGAGATGAGCGAT 60.753 55.000 0.00 0.00 0.00 4.58
706 712 1.377366 GACACGAGGGAGATGAGCGA 61.377 60.000 0.00 0.00 0.00 4.93
707 713 1.064946 GACACGAGGGAGATGAGCG 59.935 63.158 0.00 0.00 0.00 5.03
708 714 1.064946 CGACACGAGGGAGATGAGC 59.935 63.158 0.00 0.00 0.00 4.26
709 715 0.099613 CACGACACGAGGGAGATGAG 59.900 60.000 0.00 0.00 0.00 2.90
710 716 0.322187 TCACGACACGAGGGAGATGA 60.322 55.000 0.00 0.00 0.00 2.92
711 717 0.099613 CTCACGACACGAGGGAGATG 59.900 60.000 0.00 0.00 0.00 2.90
712 718 1.658686 GCTCACGACACGAGGGAGAT 61.659 60.000 0.00 0.00 0.00 2.75
713 719 2.333417 GCTCACGACACGAGGGAGA 61.333 63.158 0.00 0.00 0.00 3.71
714 720 1.025113 TAGCTCACGACACGAGGGAG 61.025 60.000 0.00 0.00 0.00 4.30
715 721 1.002990 TAGCTCACGACACGAGGGA 60.003 57.895 0.00 0.00 0.00 4.20
716 722 1.136984 GTAGCTCACGACACGAGGG 59.863 63.158 0.00 0.00 0.00 4.30
717 723 0.240145 TTGTAGCTCACGACACGAGG 59.760 55.000 0.00 0.00 30.52 4.63
718 724 1.328439 GTTGTAGCTCACGACACGAG 58.672 55.000 0.00 0.00 40.78 4.18
719 725 0.664224 TGTTGTAGCTCACGACACGA 59.336 50.000 10.55 0.00 45.02 4.35
720 726 1.053048 CTGTTGTAGCTCACGACACG 58.947 55.000 10.55 0.00 45.02 4.49
721 727 2.417339 TCTGTTGTAGCTCACGACAC 57.583 50.000 10.55 0.00 45.02 3.67
723 729 5.805486 TCATAAATCTGTTGTAGCTCACGAC 59.195 40.000 0.00 0.00 41.38 4.34
724 730 5.961272 TCATAAATCTGTTGTAGCTCACGA 58.039 37.500 0.00 0.00 0.00 4.35
725 731 6.237942 CCTTCATAAATCTGTTGTAGCTCACG 60.238 42.308 0.00 0.00 0.00 4.35
726 732 6.037610 CCCTTCATAAATCTGTTGTAGCTCAC 59.962 42.308 0.00 0.00 0.00 3.51
727 733 6.115446 CCCTTCATAAATCTGTTGTAGCTCA 58.885 40.000 0.00 0.00 0.00 4.26
728 734 5.529060 CCCCTTCATAAATCTGTTGTAGCTC 59.471 44.000 0.00 0.00 0.00 4.09
729 735 5.044846 ACCCCTTCATAAATCTGTTGTAGCT 60.045 40.000 0.00 0.00 0.00 3.32
730 736 5.066505 CACCCCTTCATAAATCTGTTGTAGC 59.933 44.000 0.00 0.00 0.00 3.58
731 737 6.180472 ACACCCCTTCATAAATCTGTTGTAG 58.820 40.000 0.00 0.00 0.00 2.74
732 738 6.134535 ACACCCCTTCATAAATCTGTTGTA 57.865 37.500 0.00 0.00 0.00 2.41
733 739 4.998051 ACACCCCTTCATAAATCTGTTGT 58.002 39.130 0.00 0.00 0.00 3.32
734 740 5.009631 TGACACCCCTTCATAAATCTGTTG 58.990 41.667 0.00 0.00 0.00 3.33
735 741 5.010282 GTGACACCCCTTCATAAATCTGTT 58.990 41.667 0.00 0.00 0.00 3.16
736 742 4.589908 GTGACACCCCTTCATAAATCTGT 58.410 43.478 0.00 0.00 0.00 3.41
737 743 3.623060 CGTGACACCCCTTCATAAATCTG 59.377 47.826 0.00 0.00 0.00 2.90
738 744 3.263425 ACGTGACACCCCTTCATAAATCT 59.737 43.478 0.00 0.00 0.00 2.40
739 745 3.606687 ACGTGACACCCCTTCATAAATC 58.393 45.455 0.00 0.00 0.00 2.17
740 746 3.263425 AGACGTGACACCCCTTCATAAAT 59.737 43.478 0.00 0.00 0.00 1.40
741 747 2.635915 AGACGTGACACCCCTTCATAAA 59.364 45.455 0.00 0.00 0.00 1.40
742 748 2.028476 CAGACGTGACACCCCTTCATAA 60.028 50.000 0.00 0.00 0.00 1.90
743 749 1.548719 CAGACGTGACACCCCTTCATA 59.451 52.381 0.00 0.00 0.00 2.15
744 750 0.321671 CAGACGTGACACCCCTTCAT 59.678 55.000 0.00 0.00 0.00 2.57
745 751 1.745890 CAGACGTGACACCCCTTCA 59.254 57.895 0.00 0.00 0.00 3.02
746 752 1.004918 CCAGACGTGACACCCCTTC 60.005 63.158 0.00 0.00 0.00 3.46
747 753 1.764854 ACCAGACGTGACACCCCTT 60.765 57.895 0.00 0.00 0.00 3.95
748 754 2.122989 ACCAGACGTGACACCCCT 60.123 61.111 0.00 0.00 0.00 4.79
749 755 2.030562 CACCAGACGTGACACCCC 59.969 66.667 0.00 0.00 46.20 4.95
750 756 2.030562 CCACCAGACGTGACACCC 59.969 66.667 0.00 0.00 46.20 4.61
751 757 1.594293 CACCACCAGACGTGACACC 60.594 63.158 0.00 0.00 46.20 4.16
752 758 1.594293 CCACCACCAGACGTGACAC 60.594 63.158 0.00 0.00 46.20 3.67
753 759 2.818841 CCACCACCAGACGTGACA 59.181 61.111 0.00 0.00 46.20 3.58
754 760 2.665185 GCCACCACCAGACGTGAC 60.665 66.667 0.00 0.00 46.20 3.67
755 761 2.658679 CTTGCCACCACCAGACGTGA 62.659 60.000 0.00 0.00 46.20 4.35
756 762 2.203139 TTGCCACCACCAGACGTG 60.203 61.111 0.00 0.00 42.62 4.49
757 763 2.111043 CTTGCCACCACCAGACGT 59.889 61.111 0.00 0.00 0.00 4.34
758 764 2.669569 CCTTGCCACCACCAGACG 60.670 66.667 0.00 0.00 0.00 4.18
759 765 1.600916 GACCTTGCCACCACCAGAC 60.601 63.158 0.00 0.00 0.00 3.51
760 766 2.075566 TGACCTTGCCACCACCAGA 61.076 57.895 0.00 0.00 0.00 3.86
761 767 1.898574 GTGACCTTGCCACCACCAG 60.899 63.158 0.00 0.00 0.00 4.00
762 768 2.194597 GTGACCTTGCCACCACCA 59.805 61.111 0.00 0.00 0.00 4.17
763 769 2.978010 CGTGACCTTGCCACCACC 60.978 66.667 0.00 0.00 0.00 4.61
764 770 2.203153 ACGTGACCTTGCCACCAC 60.203 61.111 0.00 0.00 0.00 4.16
765 771 2.203139 CACGTGACCTTGCCACCA 60.203 61.111 10.90 0.00 0.00 4.17
766 772 2.978010 CCACGTGACCTTGCCACC 60.978 66.667 19.30 0.00 0.00 4.61
767 773 3.660111 GCCACGTGACCTTGCCAC 61.660 66.667 19.30 0.00 0.00 5.01
768 774 3.872603 AGCCACGTGACCTTGCCA 61.873 61.111 19.30 0.00 0.00 4.92
769 775 2.725203 TACAGCCACGTGACCTTGCC 62.725 60.000 19.30 0.00 0.00 4.52
770 776 1.291877 CTACAGCCACGTGACCTTGC 61.292 60.000 19.30 11.60 0.00 4.01
771 777 0.670546 CCTACAGCCACGTGACCTTG 60.671 60.000 19.30 11.59 0.00 3.61
772 778 0.830444 TCCTACAGCCACGTGACCTT 60.830 55.000 19.30 0.00 0.00 3.50
773 779 0.614979 ATCCTACAGCCACGTGACCT 60.615 55.000 19.30 10.08 0.00 3.85
774 780 0.179108 GATCCTACAGCCACGTGACC 60.179 60.000 19.30 7.64 0.00 4.02
775 781 0.525668 CGATCCTACAGCCACGTGAC 60.526 60.000 19.30 5.07 0.00 3.67
776 782 1.663379 CCGATCCTACAGCCACGTGA 61.663 60.000 19.30 0.00 0.00 4.35
777 783 1.226974 CCGATCCTACAGCCACGTG 60.227 63.158 9.08 9.08 0.00 4.49
778 784 3.077519 GCCGATCCTACAGCCACGT 62.078 63.158 0.00 0.00 0.00 4.49
779 785 2.279517 GCCGATCCTACAGCCACG 60.280 66.667 0.00 0.00 0.00 4.94
780 786 0.107654 AAAGCCGATCCTACAGCCAC 60.108 55.000 0.00 0.00 0.00 5.01
781 787 0.107703 CAAAGCCGATCCTACAGCCA 60.108 55.000 0.00 0.00 0.00 4.75
782 788 0.178068 TCAAAGCCGATCCTACAGCC 59.822 55.000 0.00 0.00 0.00 4.85
783 789 1.291132 GTCAAAGCCGATCCTACAGC 58.709 55.000 0.00 0.00 0.00 4.40
784 790 2.672961 TGTCAAAGCCGATCCTACAG 57.327 50.000 0.00 0.00 0.00 2.74
785 791 3.270027 CAATGTCAAAGCCGATCCTACA 58.730 45.455 0.00 0.00 0.00 2.74
786 792 2.614057 CCAATGTCAAAGCCGATCCTAC 59.386 50.000 0.00 0.00 0.00 3.18
787 793 2.917933 CCAATGTCAAAGCCGATCCTA 58.082 47.619 0.00 0.00 0.00 2.94
788 794 1.755179 CCAATGTCAAAGCCGATCCT 58.245 50.000 0.00 0.00 0.00 3.24
789 795 0.101219 GCCAATGTCAAAGCCGATCC 59.899 55.000 0.00 0.00 0.00 3.36
790 796 0.248215 CGCCAATGTCAAAGCCGATC 60.248 55.000 0.00 0.00 0.00 3.69
791 797 1.656818 CCGCCAATGTCAAAGCCGAT 61.657 55.000 0.00 0.00 0.00 4.18
792 798 2.331893 CCGCCAATGTCAAAGCCGA 61.332 57.895 0.00 0.00 0.00 5.54
793 799 2.179018 CCGCCAATGTCAAAGCCG 59.821 61.111 0.00 0.00 0.00 5.52
794 800 0.960364 TCTCCGCCAATGTCAAAGCC 60.960 55.000 0.00 0.00 0.00 4.35
795 801 0.169009 GTCTCCGCCAATGTCAAAGC 59.831 55.000 0.00 0.00 0.00 3.51
796 802 0.443869 CGTCTCCGCCAATGTCAAAG 59.556 55.000 0.00 0.00 0.00 2.77
797 803 0.953471 CCGTCTCCGCCAATGTCAAA 60.953 55.000 0.00 0.00 0.00 2.69
798 804 1.375396 CCGTCTCCGCCAATGTCAA 60.375 57.895 0.00 0.00 0.00 3.18
799 805 2.225791 CTCCGTCTCCGCCAATGTCA 62.226 60.000 0.00 0.00 0.00 3.58
800 806 1.519455 CTCCGTCTCCGCCAATGTC 60.519 63.158 0.00 0.00 0.00 3.06
801 807 1.982395 TCTCCGTCTCCGCCAATGT 60.982 57.895 0.00 0.00 0.00 2.71
802 808 1.519455 GTCTCCGTCTCCGCCAATG 60.519 63.158 0.00 0.00 0.00 2.82
803 809 2.893398 GTCTCCGTCTCCGCCAAT 59.107 61.111 0.00 0.00 0.00 3.16
804 810 3.744719 CGTCTCCGTCTCCGCCAA 61.745 66.667 0.00 0.00 0.00 4.52
817 823 1.793134 GATGGCGTATCGTCCCGTCT 61.793 60.000 0.00 0.00 33.00 4.18
818 824 1.371389 GATGGCGTATCGTCCCGTC 60.371 63.158 0.00 0.00 0.00 4.79
819 825 2.726274 GATGGCGTATCGTCCCGT 59.274 61.111 0.00 0.00 0.00 5.28
845 852 2.754375 CTGTTTACCCGGCCCAGT 59.246 61.111 0.00 0.00 0.00 4.00
851 858 0.250989 TTGAAGGCCTGTTTACCCGG 60.251 55.000 5.69 0.00 0.00 5.73
871 878 0.681733 AGCCCACGCGATCTATCAAT 59.318 50.000 15.93 0.00 41.18 2.57
896 903 3.279875 GCCGGCCCAATCGCTAAG 61.280 66.667 18.11 0.00 0.00 2.18
897 904 4.868116 GGCCGGCCCAATCGCTAA 62.868 66.667 36.64 0.00 0.00 3.09
968 975 1.223763 GAGGGGGCGAGGGTTTTAG 59.776 63.158 0.00 0.00 0.00 1.85
970 977 3.658422 GGAGGGGGCGAGGGTTTT 61.658 66.667 0.00 0.00 0.00 2.43
982 989 1.076727 GTTGGGGTTTGAGGGAGGG 59.923 63.158 0.00 0.00 0.00 4.30
1051 1062 2.074967 TCCATGTTGGGAGGGACAC 58.925 57.895 0.00 0.00 38.32 3.67
1054 1065 1.928567 GGGTCCATGTTGGGAGGGA 60.929 63.158 0.00 0.00 38.32 4.20
1376 1387 4.434938 TCTTCGTCGTCGTCGCCG 62.435 66.667 7.01 0.00 39.77 6.46
1378 1389 0.920319 GATCTCTTCGTCGTCGTCGC 60.920 60.000 7.01 0.00 38.33 5.19
1421 1432 2.328099 GCCAGCTTCCACTTCACCG 61.328 63.158 0.00 0.00 0.00 4.94
1441 1452 2.190488 CTCTTCCCCTTCGCCTTGCT 62.190 60.000 0.00 0.00 0.00 3.91
1447 1458 4.840005 CCGCCTCTTCCCCTTCGC 62.840 72.222 0.00 0.00 0.00 4.70
1448 1459 4.162690 CCCGCCTCTTCCCCTTCG 62.163 72.222 0.00 0.00 0.00 3.79
1465 1476 4.081142 CCTCTTCTTCTTCTTCTTCTCCCC 60.081 50.000 0.00 0.00 0.00 4.81
1466 1477 4.622933 GCCTCTTCTTCTTCTTCTTCTCCC 60.623 50.000 0.00 0.00 0.00 4.30
1468 1479 5.170748 CAGCCTCTTCTTCTTCTTCTTCTC 58.829 45.833 0.00 0.00 0.00 2.87
1469 1480 4.592778 ACAGCCTCTTCTTCTTCTTCTTCT 59.407 41.667 0.00 0.00 0.00 2.85
1471 1482 4.640364 CACAGCCTCTTCTTCTTCTTCTT 58.360 43.478 0.00 0.00 0.00 2.52
1472 1483 3.556843 GCACAGCCTCTTCTTCTTCTTCT 60.557 47.826 0.00 0.00 0.00 2.85
1474 1485 2.105477 TGCACAGCCTCTTCTTCTTCTT 59.895 45.455 0.00 0.00 0.00 2.52
1475 1486 1.696336 TGCACAGCCTCTTCTTCTTCT 59.304 47.619 0.00 0.00 0.00 2.85
1529 1540 3.484229 CCGATGACGCAAAGAATTGAGAC 60.484 47.826 0.00 0.00 38.47 3.36
1541 1552 1.888436 AAGCTCCTTCCGATGACGCA 61.888 55.000 0.00 0.00 38.29 5.24
1562 1573 4.636648 TCAAGAAACGACCTTGCACTAAAA 59.363 37.500 9.94 0.00 40.45 1.52
1565 1576 3.390135 CTCAAGAAACGACCTTGCACTA 58.610 45.455 9.94 0.00 40.45 2.74
1686 1697 0.036010 GCACTGCCGCATATATCCCT 60.036 55.000 0.00 0.00 0.00 4.20
1703 1714 0.621280 TCCCTGATCCTGTGATGGCA 60.621 55.000 0.00 0.00 0.00 4.92
1787 1798 3.372025 GGGTGAGAATAAGCACCCTGATT 60.372 47.826 20.70 0.00 34.71 2.57
1892 1903 1.152567 CTTGGTTGGAAGCCCACCA 60.153 57.895 5.38 5.38 43.41 4.17
2022 2033 3.204526 GGTCAGCTTCATCAAGGATCAG 58.795 50.000 0.00 0.00 0.00 2.90
2084 2095 3.689161 TCCTTTTAGGACACATGCGAATG 59.311 43.478 0.40 0.40 40.06 2.67
2150 2161 3.804325 TCAGAGAAAGTTTCACAAGCTCG 59.196 43.478 17.65 3.11 0.00 5.03
2355 2366 5.991606 CAGACAGACCAAACAGTATCTTCAA 59.008 40.000 0.00 0.00 0.00 2.69
2517 2528 5.473039 GCAGGCAAAATTTATGACAGTTCT 58.527 37.500 8.34 0.00 0.00 3.01
2642 2653 4.386954 GCCTTCTTTGCAATAGCTTTCAAC 59.613 41.667 0.00 0.00 42.74 3.18
2750 2761 8.267894 TCCCTTTCTTCCAGAATTATGTTAGAG 58.732 37.037 0.00 0.00 33.67 2.43
2852 2863 1.376037 GGTTCTCTTGGGGCGTGAG 60.376 63.158 0.00 0.00 0.00 3.51
2945 2956 3.923461 GCTGAGCACTAACAACTACAGAG 59.077 47.826 0.00 0.00 0.00 3.35
3020 3031 2.025155 CTGCGCTTCTTCCTAGGTAGA 58.975 52.381 13.75 13.75 0.00 2.59
3044 3055 3.842925 TTCCCGCTGTGCCTCCAAC 62.843 63.158 0.00 0.00 0.00 3.77
3053 3064 0.179000 CCTCTAGCATTTCCCGCTGT 59.821 55.000 0.00 0.00 40.73 4.40
3056 3067 0.250081 CCTCCTCTAGCATTTCCCGC 60.250 60.000 0.00 0.00 0.00 6.13
3062 3073 3.697190 TCCTTCTCCTCCTCTAGCATT 57.303 47.619 0.00 0.00 0.00 3.56
3068 3079 2.244769 CTCCTCTTCCTTCTCCTCCTCT 59.755 54.545 0.00 0.00 0.00 3.69
3190 3204 3.561217 TTGCTAGCACGAACGCCGA 62.561 57.895 19.17 0.00 41.76 5.54
3195 3209 2.806244 TCTTTCCTTTGCTAGCACGAAC 59.194 45.455 19.17 0.00 0.00 3.95
3240 3254 1.680249 CCTAGTCTGGCCCTTTTCAGC 60.680 57.143 0.00 0.00 0.00 4.26
3254 3268 2.991250 TGCATTTCCTCTTGCCTAGTC 58.009 47.619 0.00 0.00 38.08 2.59
3257 3271 3.650281 TCATGCATTTCCTCTTGCCTA 57.350 42.857 0.00 0.00 38.08 3.93
3337 3351 5.689819 TCTTAGATTTCTTTGCAAACGAGC 58.310 37.500 8.05 0.00 0.00 5.03
3363 3377 2.560105 ACCTTGATTTGCTCTTGAAGGC 59.440 45.455 0.00 0.00 34.48 4.35
3445 3459 2.704725 AATGTCACAACGGAATGCAC 57.295 45.000 0.00 0.00 0.00 4.57
3576 3590 6.783708 AAATAAACCACTGAACCAGAAACA 57.216 33.333 0.45 0.00 35.18 2.83
3582 3596 8.528044 AGAAACTAAAATAAACCACTGAACCA 57.472 30.769 0.00 0.00 0.00 3.67
3639 3815 5.766150 TCAGAAGGAAAAGCGAAAAATGA 57.234 34.783 0.00 0.00 0.00 2.57
3720 3898 5.463154 CCCTATATAGATGGAAGGAGGGAG 58.537 50.000 11.53 0.00 44.48 4.30
3721 3899 4.327010 GCCCTATATAGATGGAAGGAGGGA 60.327 50.000 11.53 0.00 44.48 4.20
3722 3900 3.970640 GCCCTATATAGATGGAAGGAGGG 59.029 52.174 11.53 3.52 44.52 4.30
3723 3901 3.970640 GGCCCTATATAGATGGAAGGAGG 59.029 52.174 11.53 1.87 0.00 4.30
3724 3902 4.889780 AGGCCCTATATAGATGGAAGGAG 58.110 47.826 11.53 0.00 0.00 3.69
3725 3903 4.994411 AGGCCCTATATAGATGGAAGGA 57.006 45.455 11.53 0.00 0.00 3.36
3726 3904 6.465035 GCATTAGGCCCTATATAGATGGAAGG 60.465 46.154 11.53 3.94 36.11 3.46
3727 3905 6.529220 GCATTAGGCCCTATATAGATGGAAG 58.471 44.000 11.53 0.00 36.11 3.46
3728 3906 5.070446 CGCATTAGGCCCTATATAGATGGAA 59.930 44.000 11.53 0.00 40.31 3.53
3729 3907 4.588951 CGCATTAGGCCCTATATAGATGGA 59.411 45.833 11.53 0.00 40.31 3.41
3730 3908 4.345257 ACGCATTAGGCCCTATATAGATGG 59.655 45.833 11.53 6.04 40.31 3.51
3731 3909 5.537300 ACGCATTAGGCCCTATATAGATG 57.463 43.478 11.53 6.87 40.31 2.90
3732 3910 6.561519 AAACGCATTAGGCCCTATATAGAT 57.438 37.500 11.53 0.00 40.31 1.98
3733 3911 6.368779 AAAACGCATTAGGCCCTATATAGA 57.631 37.500 11.53 0.00 40.31 1.98
3734 3912 6.653320 TGAAAAACGCATTAGGCCCTATATAG 59.347 38.462 0.00 2.46 40.31 1.31
3735 3913 6.535540 TGAAAAACGCATTAGGCCCTATATA 58.464 36.000 0.00 0.00 40.31 0.86
3736 3914 5.381757 TGAAAAACGCATTAGGCCCTATAT 58.618 37.500 0.00 0.00 40.31 0.86
3737 3915 4.783055 TGAAAAACGCATTAGGCCCTATA 58.217 39.130 0.00 0.00 40.31 1.31
3738 3916 3.626930 TGAAAAACGCATTAGGCCCTAT 58.373 40.909 0.00 0.00 40.31 2.57
3739 3917 3.074675 TGAAAAACGCATTAGGCCCTA 57.925 42.857 0.00 0.00 40.31 3.53
3740 3918 1.917872 TGAAAAACGCATTAGGCCCT 58.082 45.000 0.00 0.00 40.31 5.19
3741 3919 2.606108 CTTGAAAAACGCATTAGGCCC 58.394 47.619 0.00 0.00 40.31 5.80
3742 3920 2.606108 CCTTGAAAAACGCATTAGGCC 58.394 47.619 0.00 0.00 40.31 5.19
3743 3921 1.992667 GCCTTGAAAAACGCATTAGGC 59.007 47.619 0.00 0.00 39.79 3.93
3744 3922 3.575965 AGCCTTGAAAAACGCATTAGG 57.424 42.857 0.00 0.00 0.00 2.69
3745 3923 5.699839 AGTTAGCCTTGAAAAACGCATTAG 58.300 37.500 0.00 0.00 0.00 1.73
3746 3924 5.699097 AGTTAGCCTTGAAAAACGCATTA 57.301 34.783 0.00 0.00 0.00 1.90
3747 3925 4.584327 AGTTAGCCTTGAAAAACGCATT 57.416 36.364 0.00 0.00 0.00 3.56
3748 3926 4.584327 AAGTTAGCCTTGAAAAACGCAT 57.416 36.364 0.00 0.00 30.18 4.73
3749 3927 4.109050 CAAAGTTAGCCTTGAAAAACGCA 58.891 39.130 0.00 0.00 32.32 5.24
3750 3928 4.206404 GTCAAAGTTAGCCTTGAAAAACGC 59.794 41.667 0.00 0.00 32.32 4.84
3751 3929 4.738252 GGTCAAAGTTAGCCTTGAAAAACG 59.262 41.667 0.00 0.00 32.32 3.60
3752 3930 5.656480 TGGTCAAAGTTAGCCTTGAAAAAC 58.344 37.500 0.00 0.00 32.32 2.43
3753 3931 5.923733 TGGTCAAAGTTAGCCTTGAAAAA 57.076 34.783 0.00 0.00 32.32 1.94
3754 3932 5.923733 TTGGTCAAAGTTAGCCTTGAAAA 57.076 34.783 0.00 0.00 32.32 2.29
3755 3933 5.923733 TTTGGTCAAAGTTAGCCTTGAAA 57.076 34.783 0.00 0.00 32.32 2.69
3756 3934 7.775053 ATATTTGGTCAAAGTTAGCCTTGAA 57.225 32.000 2.55 0.00 33.32 2.69
3757 3935 7.775053 AATATTTGGTCAAAGTTAGCCTTGA 57.225 32.000 2.55 0.00 33.32 3.02
3758 3936 8.956426 TCTAATATTTGGTCAAAGTTAGCCTTG 58.044 33.333 17.32 0.00 35.14 3.61
3759 3937 9.178758 CTCTAATATTTGGTCAAAGTTAGCCTT 57.821 33.333 17.32 0.00 35.14 4.35
3760 3938 7.283354 GCTCTAATATTTGGTCAAAGTTAGCCT 59.717 37.037 17.32 0.41 35.14 4.58
3761 3939 7.283354 AGCTCTAATATTTGGTCAAAGTTAGCC 59.717 37.037 17.32 13.39 35.14 3.93
3762 3940 8.214721 AGCTCTAATATTTGGTCAAAGTTAGC 57.785 34.615 17.32 13.21 35.14 3.09
3791 3969 8.131100 GCTTTGTGTAAGTTGCATGTCATATAT 58.869 33.333 0.00 0.00 36.19 0.86
3792 3970 7.120432 TGCTTTGTGTAAGTTGCATGTCATATA 59.880 33.333 0.00 0.00 36.19 0.86
3793 3971 6.072008 TGCTTTGTGTAAGTTGCATGTCATAT 60.072 34.615 0.00 0.00 36.19 1.78
3794 3972 5.240403 TGCTTTGTGTAAGTTGCATGTCATA 59.760 36.000 0.00 0.00 36.19 2.15
3795 3973 4.037803 TGCTTTGTGTAAGTTGCATGTCAT 59.962 37.500 0.00 0.00 36.19 3.06
3796 3974 3.379688 TGCTTTGTGTAAGTTGCATGTCA 59.620 39.130 0.00 0.00 36.19 3.58
3797 3975 3.730715 GTGCTTTGTGTAAGTTGCATGTC 59.269 43.478 0.00 0.00 36.19 3.06
3798 3976 3.130164 TGTGCTTTGTGTAAGTTGCATGT 59.870 39.130 0.00 0.00 36.19 3.21
3799 3977 3.486841 GTGTGCTTTGTGTAAGTTGCATG 59.513 43.478 0.00 0.00 36.19 4.06
3800 3978 3.490761 GGTGTGCTTTGTGTAAGTTGCAT 60.491 43.478 0.00 0.00 36.19 3.96
3801 3979 2.159310 GGTGTGCTTTGTGTAAGTTGCA 60.159 45.455 0.00 0.00 36.19 4.08
3802 3980 2.459934 GGTGTGCTTTGTGTAAGTTGC 58.540 47.619 0.00 0.00 36.19 4.17
3803 3981 2.096819 ACGGTGTGCTTTGTGTAAGTTG 59.903 45.455 0.00 0.00 36.19 3.16
3804 3982 2.361789 ACGGTGTGCTTTGTGTAAGTT 58.638 42.857 0.00 0.00 36.19 2.66
3805 3983 2.032680 ACGGTGTGCTTTGTGTAAGT 57.967 45.000 0.00 0.00 36.19 2.24
3806 3984 4.539509 TTAACGGTGTGCTTTGTGTAAG 57.460 40.909 0.00 0.00 36.90 2.34
3807 3985 4.959596 TTTAACGGTGTGCTTTGTGTAA 57.040 36.364 0.00 0.00 0.00 2.41
3808 3986 5.502153 AATTTAACGGTGTGCTTTGTGTA 57.498 34.783 0.00 0.00 0.00 2.90
3809 3987 4.356289 GAATTTAACGGTGTGCTTTGTGT 58.644 39.130 0.00 0.00 0.00 3.72
3810 3988 3.420576 CGAATTTAACGGTGTGCTTTGTG 59.579 43.478 0.00 0.00 0.00 3.33
3811 3989 3.065648 ACGAATTTAACGGTGTGCTTTGT 59.934 39.130 0.00 0.00 34.93 2.83
3812 3990 3.420576 CACGAATTTAACGGTGTGCTTTG 59.579 43.478 0.00 0.00 34.93 2.77
3813 3991 3.065648 ACACGAATTTAACGGTGTGCTTT 59.934 39.130 0.00 0.00 34.93 3.51
3814 3992 2.614983 ACACGAATTTAACGGTGTGCTT 59.385 40.909 0.00 0.00 34.93 3.91
3815 3993 2.032377 CACACGAATTTAACGGTGTGCT 60.032 45.455 9.81 0.00 36.70 4.40
3816 3994 2.286536 ACACACGAATTTAACGGTGTGC 60.287 45.455 19.53 0.00 41.40 4.57
3817 3995 3.284914 CACACACGAATTTAACGGTGTG 58.715 45.455 18.39 18.39 45.49 3.82
3818 3996 3.196463 TCACACACGAATTTAACGGTGT 58.804 40.909 0.00 0.00 41.61 4.16
3819 3997 3.863396 TCACACACGAATTTAACGGTG 57.137 42.857 0.00 0.00 37.66 4.94
3820 3998 4.260866 CCTTTCACACACGAATTTAACGGT 60.261 41.667 0.00 0.00 34.93 4.83
3821 3999 4.024725 TCCTTTCACACACGAATTTAACGG 60.025 41.667 0.00 0.00 34.93 4.44
3822 4000 5.085636 TCCTTTCACACACGAATTTAACG 57.914 39.130 0.00 0.00 0.00 3.18
3823 4001 4.909880 GCTCCTTTCACACACGAATTTAAC 59.090 41.667 0.00 0.00 0.00 2.01
3824 4002 4.819630 AGCTCCTTTCACACACGAATTTAA 59.180 37.500 0.00 0.00 0.00 1.52
3825 4003 4.385825 AGCTCCTTTCACACACGAATTTA 58.614 39.130 0.00 0.00 0.00 1.40
3826 4004 3.214328 AGCTCCTTTCACACACGAATTT 58.786 40.909 0.00 0.00 0.00 1.82
3827 4005 2.851195 AGCTCCTTTCACACACGAATT 58.149 42.857 0.00 0.00 0.00 2.17
3828 4006 2.550830 AGCTCCTTTCACACACGAAT 57.449 45.000 0.00 0.00 0.00 3.34
3829 4007 2.325583 AAGCTCCTTTCACACACGAA 57.674 45.000 0.00 0.00 0.00 3.85
3830 4008 2.210116 GAAAGCTCCTTTCACACACGA 58.790 47.619 11.65 0.00 46.23 4.35
3831 4009 2.670401 GAAAGCTCCTTTCACACACG 57.330 50.000 11.65 0.00 46.23 4.49
3886 4064 8.773645 CGCCTTTGACTATTGACATGATTAATA 58.226 33.333 0.00 0.65 0.00 0.98
3887 4065 7.255242 CCGCCTTTGACTATTGACATGATTAAT 60.255 37.037 0.00 0.00 0.00 1.40
3888 4066 6.038161 CCGCCTTTGACTATTGACATGATTAA 59.962 38.462 0.00 0.00 0.00 1.40
3889 4067 5.527214 CCGCCTTTGACTATTGACATGATTA 59.473 40.000 0.00 0.00 0.00 1.75
3890 4068 4.336433 CCGCCTTTGACTATTGACATGATT 59.664 41.667 0.00 0.00 0.00 2.57
3891 4069 3.879295 CCGCCTTTGACTATTGACATGAT 59.121 43.478 0.00 0.00 0.00 2.45
3892 4070 3.270027 CCGCCTTTGACTATTGACATGA 58.730 45.455 0.00 0.00 0.00 3.07
3893 4071 3.009723 ACCGCCTTTGACTATTGACATG 58.990 45.455 0.00 0.00 0.00 3.21
3894 4072 3.055094 AGACCGCCTTTGACTATTGACAT 60.055 43.478 0.00 0.00 0.00 3.06
3895 4073 2.301870 AGACCGCCTTTGACTATTGACA 59.698 45.455 0.00 0.00 0.00 3.58
3896 4074 2.973945 AGACCGCCTTTGACTATTGAC 58.026 47.619 0.00 0.00 0.00 3.18
3897 4075 3.695830 AAGACCGCCTTTGACTATTGA 57.304 42.857 0.00 0.00 0.00 2.57
3898 4076 5.873179 TTTAAGACCGCCTTTGACTATTG 57.127 39.130 0.00 0.00 36.34 1.90
3899 4077 6.887626 TTTTTAAGACCGCCTTTGACTATT 57.112 33.333 0.00 0.00 36.34 1.73
3919 4097 9.193806 CATCTATATAGGGCCTAATGCATTTTT 57.806 33.333 18.91 0.00 43.89 1.94
3920 4098 7.781693 CCATCTATATAGGGCCTAATGCATTTT 59.218 37.037 18.91 0.30 43.89 1.82
3921 4099 7.129349 TCCATCTATATAGGGCCTAATGCATTT 59.871 37.037 18.91 1.12 43.89 2.32
3922 4100 6.621098 TCCATCTATATAGGGCCTAATGCATT 59.379 38.462 18.91 17.56 43.89 3.56
3923 4101 6.153204 TCCATCTATATAGGGCCTAATGCAT 58.847 40.000 18.91 10.87 43.89 3.96
3924 4102 5.537914 TCCATCTATATAGGGCCTAATGCA 58.462 41.667 18.91 0.00 43.89 3.96
3925 4103 6.465035 CCTTCCATCTATATAGGGCCTAATGC 60.465 46.154 18.91 0.00 40.16 3.56
3926 4104 6.846505 TCCTTCCATCTATATAGGGCCTAATG 59.153 42.308 18.91 15.42 0.00 1.90
3927 4105 7.009960 TCCTTCCATCTATATAGGGCCTAAT 57.990 40.000 18.91 14.19 0.00 1.73
3928 4106 6.432190 TCCTTCCATCTATATAGGGCCTAA 57.568 41.667 18.91 7.61 0.00 2.69
3929 4107 6.432190 TTCCTTCCATCTATATAGGGCCTA 57.568 41.667 17.16 17.16 0.00 3.93
3930 4108 4.994411 TCCTTCCATCTATATAGGGCCT 57.006 45.455 12.58 12.58 0.00 5.19
3931 4109 4.410555 CCTTCCTTCCATCTATATAGGGCC 59.589 50.000 9.89 0.00 0.00 5.80
3932 4110 5.281314 TCCTTCCTTCCATCTATATAGGGC 58.719 45.833 9.89 0.00 0.00 5.19
3933 4111 6.507568 ACTCCTTCCTTCCATCTATATAGGG 58.492 44.000 9.89 4.49 0.00 3.53
3934 4112 9.362151 GATACTCCTTCCTTCCATCTATATAGG 57.638 40.741 9.89 0.00 0.00 2.57
3937 4115 9.851267 AAAGATACTCCTTCCTTCCATCTATAT 57.149 33.333 0.00 0.00 0.00 0.86
3938 4116 9.315363 GAAAGATACTCCTTCCTTCCATCTATA 57.685 37.037 0.00 0.00 0.00 1.31
3939 4117 8.016054 AGAAAGATACTCCTTCCTTCCATCTAT 58.984 37.037 0.00 0.00 0.00 1.98
3940 4118 7.366226 AGAAAGATACTCCTTCCTTCCATCTA 58.634 38.462 0.00 0.00 0.00 1.98
3941 4119 6.209026 AGAAAGATACTCCTTCCTTCCATCT 58.791 40.000 0.00 0.00 0.00 2.90
3942 4120 6.493189 AGAAAGATACTCCTTCCTTCCATC 57.507 41.667 0.00 0.00 0.00 3.51
3943 4121 6.899892 AAGAAAGATACTCCTTCCTTCCAT 57.100 37.500 0.00 0.00 0.00 3.41
3944 4122 6.272324 TGAAAGAAAGATACTCCTTCCTTCCA 59.728 38.462 0.00 0.00 0.00 3.53
3945 4123 6.712276 TGAAAGAAAGATACTCCTTCCTTCC 58.288 40.000 0.00 0.00 0.00 3.46
3946 4124 8.672815 CAATGAAAGAAAGATACTCCTTCCTTC 58.327 37.037 0.00 0.00 0.00 3.46
3947 4125 8.166726 ACAATGAAAGAAAGATACTCCTTCCTT 58.833 33.333 0.00 0.00 0.00 3.36
3948 4126 7.694093 ACAATGAAAGAAAGATACTCCTTCCT 58.306 34.615 0.00 0.00 0.00 3.36
3949 4127 7.929941 ACAATGAAAGAAAGATACTCCTTCC 57.070 36.000 0.00 0.00 0.00 3.46
3950 4128 9.833182 GAAACAATGAAAGAAAGATACTCCTTC 57.167 33.333 0.00 0.00 0.00 3.46
3951 4129 9.579932 AGAAACAATGAAAGAAAGATACTCCTT 57.420 29.630 0.00 0.00 0.00 3.36
3952 4130 9.579932 AAGAAACAATGAAAGAAAGATACTCCT 57.420 29.630 0.00 0.00 0.00 3.69
3958 4136 9.755804 GGAGAAAAGAAACAATGAAAGAAAGAT 57.244 29.630 0.00 0.00 0.00 2.40
3992 4170 6.434596 CAACATCCAAACGAAGTGTTATGAA 58.565 36.000 0.00 0.00 45.00 2.57
3994 4172 4.616802 GCAACATCCAAACGAAGTGTTATG 59.383 41.667 0.00 0.00 45.00 1.90
3995 4173 4.277174 TGCAACATCCAAACGAAGTGTTAT 59.723 37.500 0.00 0.00 45.00 1.89
3996 4174 3.628032 TGCAACATCCAAACGAAGTGTTA 59.372 39.130 0.00 0.00 45.00 2.41
3998 4176 2.020720 TGCAACATCCAAACGAAGTGT 58.979 42.857 0.00 0.00 45.00 3.55
3999 4177 2.772568 TGCAACATCCAAACGAAGTG 57.227 45.000 0.00 0.00 45.00 3.16
4007 4187 1.603236 GGCCCGAATGCAACATCCAA 61.603 55.000 0.00 0.00 0.00 3.53
4044 4228 6.962311 TGGTATTCAGGATATTCAGCCTAGAT 59.038 38.462 0.00 0.00 39.02 1.98
4048 4232 4.042187 GGTGGTATTCAGGATATTCAGCCT 59.958 45.833 0.00 0.00 42.97 4.58
4093 4277 0.108520 CATGCCCAAATGCCACAGAC 60.109 55.000 0.00 0.00 0.00 3.51
4111 4295 1.153061 AGGGCGGGTCTCGATATCA 59.847 57.895 0.00 0.00 42.43 2.15
4145 4334 1.228552 ACGCTCCAAATTGGGCAGT 60.229 52.632 20.01 16.12 38.32 4.40
4147 4336 1.074775 AGACGCTCCAAATTGGGCA 59.925 52.632 20.01 0.60 38.32 5.36
4259 4454 2.993853 CTGGACAGGAGGAAGGCC 59.006 66.667 0.00 0.00 0.00 5.19
4263 4458 3.706373 GCCGCTGGACAGGAGGAA 61.706 66.667 1.01 0.00 0.00 3.36
4277 4472 0.393537 AAGCAAAGAGGAGATGGCCG 60.394 55.000 0.00 0.00 0.00 6.13
4279 4474 2.119801 TCAAGCAAAGAGGAGATGGC 57.880 50.000 0.00 0.00 0.00 4.40
4353 4548 2.280404 ATCCCGAGGTAGAGGTCGCA 62.280 60.000 0.00 0.00 34.78 5.10
4403 4599 0.956633 CTTGACAGCAGCCACAACAT 59.043 50.000 0.00 0.00 0.00 2.71
4467 4663 8.375506 CCCTAGCTTGGAAATATAGTTGTATCA 58.624 37.037 16.43 0.00 0.00 2.15
4483 4679 3.922171 AAGAACAGATCCCTAGCTTGG 57.078 47.619 7.29 7.29 0.00 3.61
4493 4930 5.858581 CCGAAAACAATCCAAAGAACAGATC 59.141 40.000 0.00 0.00 0.00 2.75
4499 4936 2.695666 TGGCCGAAAACAATCCAAAGAA 59.304 40.909 0.00 0.00 0.00 2.52
4533 4971 5.519722 AGTTAGGAACACAAGAAAAATGCG 58.480 37.500 0.00 0.00 0.00 4.73



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.