Multiple sequence alignment - TraesCS5A01G373400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G373400 chr5A 100.000 4906 0 0 1 4906 571426925 571431830 0.000000e+00 9060
1 TraesCS5A01G373400 chr5D 92.940 4051 192 41 831 4834 452495941 452499944 0.000000e+00 5810
2 TraesCS5A01G373400 chr5D 87.823 271 27 3 511 780 536750343 536750608 3.690000e-81 313
3 TraesCS5A01G373400 chr5D 87.454 271 28 3 511 780 494780043 494780308 1.720000e-79 307
4 TraesCS5A01G373400 chr5D 92.222 90 4 3 4816 4902 452499881 452499970 1.850000e-24 124
5 TraesCS5A01G373400 chr5D 90.476 84 8 0 1219 1302 546858322 546858405 1.440000e-20 111
6 TraesCS5A01G373400 chr5B 93.062 2090 100 21 831 2893 552840210 552842281 0.000000e+00 3014
7 TraesCS5A01G373400 chr5B 92.918 1765 87 16 3046 4787 552842706 552844455 0.000000e+00 2532
8 TraesCS5A01G373400 chr5B 93.023 86 5 1 2878 2963 552842626 552842710 1.850000e-24 124
9 TraesCS5A01G373400 chrUn 86.567 268 30 3 514 780 1510152 1509890 1.730000e-74 291
10 TraesCS5A01G373400 chr3D 84.871 271 36 2 510 780 181800929 181801194 8.090000e-68 268
11 TraesCS5A01G373400 chr2D 81.985 272 41 6 510 780 68808853 68808589 1.780000e-54 224
12 TraesCS5A01G373400 chr3B 82.199 191 29 2 510 700 260139998 260140183 5.080000e-35 159


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G373400 chr5A 571426925 571431830 4905 False 9060 9060 100.000 1 4906 1 chr5A.!!$F1 4905
1 TraesCS5A01G373400 chr5D 452495941 452499970 4029 False 2967 5810 92.581 831 4902 2 chr5D.!!$F4 4071
2 TraesCS5A01G373400 chr5B 552840210 552844455 4245 False 1890 3014 93.001 831 4787 3 chr5B.!!$F1 3956

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
730 731 0.033366 GCCATGTTTGGTTGGGTCAC 59.967 55.0 0.0 0.0 45.57 3.67 F
1324 1345 0.105913 GATCTCCCCTCCTTCTCCGT 60.106 60.0 0.0 0.0 0.00 4.69 F
2716 2780 0.246910 GACTTGTCGAGGGAAGGGAC 59.753 60.0 0.0 0.0 0.00 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2716 2780 0.105964 TTGACACTTGACACCCTCCG 59.894 55.0 0.00 0.00 0.00 4.63 R
2835 2899 0.550914 TCACCTGGCCAAGTTCTTGT 59.449 50.0 7.01 0.00 0.00 3.16 R
4377 4816 0.037017 TCATTCGCCTTCCGGGAAAA 59.963 50.0 11.24 2.46 45.53 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.735132 CCCGACACGGCACACGAT 62.735 66.667 4.57 0.00 46.86 3.73
26 27 2.822418 CCCGACACGGCACACGATTA 62.822 60.000 4.57 0.00 46.86 1.75
34 35 1.990799 GGCACACGATTAAAAAGGGC 58.009 50.000 0.00 0.00 0.00 5.19
35 36 1.403647 GGCACACGATTAAAAAGGGCC 60.404 52.381 0.00 0.00 0.00 5.80
36 37 1.544246 GCACACGATTAAAAAGGGCCT 59.456 47.619 0.00 0.00 0.00 5.19
37 38 2.029380 GCACACGATTAAAAAGGGCCTT 60.029 45.455 14.48 14.48 0.00 4.35
38 39 3.191791 GCACACGATTAAAAAGGGCCTTA 59.808 43.478 21.25 3.64 0.00 2.69
39 40 4.729595 CACACGATTAAAAAGGGCCTTAC 58.270 43.478 21.25 6.35 0.00 2.34
40 41 3.760151 ACACGATTAAAAAGGGCCTTACC 59.240 43.478 21.25 4.49 37.93 2.85
50 51 3.777910 GCCTTACCCGGCCTTCGA 61.778 66.667 0.00 0.00 44.41 3.71
51 52 2.186125 CCTTACCCGGCCTTCGAC 59.814 66.667 0.00 0.00 42.43 4.20
52 53 2.186125 CTTACCCGGCCTTCGACC 59.814 66.667 0.00 0.00 42.43 4.79
53 54 3.381333 CTTACCCGGCCTTCGACCC 62.381 68.421 0.00 0.00 42.43 4.46
54 55 4.700448 TACCCGGCCTTCGACCCA 62.700 66.667 0.00 0.00 42.43 4.51
60 61 3.998672 GCCTTCGACCCACCACGA 61.999 66.667 0.00 0.00 36.75 4.35
61 62 2.738480 CCTTCGACCCACCACGAA 59.262 61.111 0.00 0.00 44.26 3.85
62 63 1.070105 CCTTCGACCCACCACGAAA 59.930 57.895 0.00 0.00 45.37 3.46
63 64 1.226030 CCTTCGACCCACCACGAAAC 61.226 60.000 0.00 0.00 45.37 2.78
64 65 0.531090 CTTCGACCCACCACGAAACA 60.531 55.000 0.00 0.00 45.37 2.83
65 66 0.107800 TTCGACCCACCACGAAACAA 60.108 50.000 0.00 0.00 43.68 2.83
66 67 0.531090 TCGACCCACCACGAAACAAG 60.531 55.000 0.00 0.00 35.62 3.16
67 68 1.503818 CGACCCACCACGAAACAAGG 61.504 60.000 0.00 0.00 0.00 3.61
68 69 1.792118 GACCCACCACGAAACAAGGC 61.792 60.000 0.00 0.00 0.00 4.35
69 70 2.561037 CCCACCACGAAACAAGGCC 61.561 63.158 0.00 0.00 0.00 5.19
70 71 2.637025 CACCACGAAACAAGGCCG 59.363 61.111 0.00 0.00 0.00 6.13
71 72 1.890041 CACCACGAAACAAGGCCGA 60.890 57.895 0.00 0.00 0.00 5.54
72 73 1.072505 ACCACGAAACAAGGCCGAT 59.927 52.632 0.00 0.00 0.00 4.18
73 74 0.953960 ACCACGAAACAAGGCCGATC 60.954 55.000 0.00 0.00 0.00 3.69
74 75 0.673644 CCACGAAACAAGGCCGATCT 60.674 55.000 0.00 0.00 0.00 2.75
75 76 0.721718 CACGAAACAAGGCCGATCTC 59.278 55.000 0.00 0.00 0.00 2.75
76 77 0.736325 ACGAAACAAGGCCGATCTCG 60.736 55.000 13.40 13.40 39.44 4.04
77 78 0.457853 CGAAACAAGGCCGATCTCGA 60.458 55.000 10.54 0.00 43.02 4.04
78 79 1.722011 GAAACAAGGCCGATCTCGAA 58.278 50.000 0.00 0.00 43.02 3.71
79 80 2.073816 GAAACAAGGCCGATCTCGAAA 58.926 47.619 0.00 0.00 43.02 3.46
80 81 1.726853 AACAAGGCCGATCTCGAAAG 58.273 50.000 0.00 0.00 43.02 2.62
81 82 0.741221 ACAAGGCCGATCTCGAAAGC 60.741 55.000 0.00 0.00 43.02 3.51
82 83 1.519455 AAGGCCGATCTCGAAAGCG 60.519 57.895 0.00 0.00 43.02 4.68
83 84 1.945354 AAGGCCGATCTCGAAAGCGA 61.945 55.000 0.00 0.00 45.71 4.93
96 97 3.606777 TCGAAAGCGAAGTCTTAATGTCG 59.393 43.478 0.00 0.00 44.78 4.35
97 98 3.364023 CGAAAGCGAAGTCTTAATGTCGT 59.636 43.478 0.00 0.00 40.82 4.34
98 99 4.488889 CGAAAGCGAAGTCTTAATGTCGTC 60.489 45.833 0.00 0.00 40.82 4.20
99 100 2.516923 AGCGAAGTCTTAATGTCGTCG 58.483 47.619 0.00 0.00 38.26 5.12
100 101 1.582502 GCGAAGTCTTAATGTCGTCGG 59.417 52.381 0.00 0.00 36.61 4.79
101 102 2.182825 CGAAGTCTTAATGTCGTCGGG 58.817 52.381 0.00 0.00 33.91 5.14
102 103 1.925185 GAAGTCTTAATGTCGTCGGGC 59.075 52.381 0.00 0.00 0.00 6.13
103 104 0.892755 AGTCTTAATGTCGTCGGGCA 59.107 50.000 0.00 0.00 0.00 5.36
104 105 1.480954 AGTCTTAATGTCGTCGGGCAT 59.519 47.619 0.00 0.00 0.00 4.40
105 106 1.593006 GTCTTAATGTCGTCGGGCATG 59.407 52.381 4.47 0.00 0.00 4.06
106 107 0.937304 CTTAATGTCGTCGGGCATGG 59.063 55.000 0.00 0.00 0.00 3.66
107 108 1.092921 TTAATGTCGTCGGGCATGGC 61.093 55.000 11.56 11.56 0.00 4.40
108 109 2.245438 TAATGTCGTCGGGCATGGCA 62.245 55.000 22.06 0.00 0.00 4.92
116 117 4.740822 GGGCATGGCACGTCCCTT 62.741 66.667 22.06 0.00 35.87 3.95
117 118 2.676471 GGCATGGCACGTCCCTTT 60.676 61.111 15.47 0.00 0.00 3.11
118 119 2.275380 GGCATGGCACGTCCCTTTT 61.275 57.895 15.47 0.00 0.00 2.27
119 120 1.665442 GCATGGCACGTCCCTTTTT 59.335 52.632 0.00 0.00 0.00 1.94
138 139 4.364415 TTTTATTGCAAGCCGGTATGAC 57.636 40.909 4.94 4.91 0.00 3.06
139 140 2.700722 TATTGCAAGCCGGTATGACA 57.299 45.000 4.94 7.09 0.00 3.58
140 141 1.094785 ATTGCAAGCCGGTATGACAC 58.905 50.000 4.94 0.00 0.00 3.67
141 142 1.295357 TTGCAAGCCGGTATGACACG 61.295 55.000 12.11 0.00 0.00 4.49
146 147 2.103538 CCGGTATGACACGGTCCG 59.896 66.667 10.48 10.48 44.85 4.79
147 148 2.409055 CCGGTATGACACGGTCCGA 61.409 63.158 20.51 0.00 44.85 4.55
148 149 1.731433 CCGGTATGACACGGTCCGAT 61.731 60.000 20.51 5.24 44.85 4.18
149 150 0.594028 CGGTATGACACGGTCCGATG 60.594 60.000 20.51 14.69 43.22 3.84
150 151 0.874607 GGTATGACACGGTCCGATGC 60.875 60.000 20.51 4.17 0.00 3.91
151 152 1.065109 TATGACACGGTCCGATGCG 59.935 57.895 20.51 5.76 0.00 4.73
167 168 2.593436 CGGCCCGTCCAACACTTT 60.593 61.111 0.00 0.00 34.01 2.66
168 169 2.190841 CGGCCCGTCCAACACTTTT 61.191 57.895 0.00 0.00 34.01 2.27
169 170 1.730451 CGGCCCGTCCAACACTTTTT 61.730 55.000 0.00 0.00 34.01 1.94
282 283 9.660180 AATCTTAGGTTTGTTCTACATCTTCTC 57.340 33.333 0.00 0.00 0.00 2.87
283 284 8.423906 TCTTAGGTTTGTTCTACATCTTCTCT 57.576 34.615 0.00 0.00 0.00 3.10
284 285 8.871125 TCTTAGGTTTGTTCTACATCTTCTCTT 58.129 33.333 0.00 0.00 0.00 2.85
347 348 7.812648 ACTTTAAAACAAAAGGAACAAAAGGC 58.187 30.769 1.84 0.00 40.16 4.35
348 349 7.663905 ACTTTAAAACAAAAGGAACAAAAGGCT 59.336 29.630 1.84 0.00 40.16 4.58
349 350 5.878332 AAAACAAAAGGAACAAAAGGCTG 57.122 34.783 0.00 0.00 0.00 4.85
350 351 4.817318 AACAAAAGGAACAAAAGGCTGA 57.183 36.364 0.00 0.00 0.00 4.26
351 352 4.817318 ACAAAAGGAACAAAAGGCTGAA 57.183 36.364 0.00 0.00 0.00 3.02
352 353 5.159273 ACAAAAGGAACAAAAGGCTGAAA 57.841 34.783 0.00 0.00 0.00 2.69
353 354 5.555966 ACAAAAGGAACAAAAGGCTGAAAA 58.444 33.333 0.00 0.00 0.00 2.29
354 355 5.643348 ACAAAAGGAACAAAAGGCTGAAAAG 59.357 36.000 0.00 0.00 0.00 2.27
355 356 5.420725 AAAGGAACAAAAGGCTGAAAAGT 57.579 34.783 0.00 0.00 0.00 2.66
356 357 6.538945 AAAGGAACAAAAGGCTGAAAAGTA 57.461 33.333 0.00 0.00 0.00 2.24
357 358 6.538945 AAGGAACAAAAGGCTGAAAAGTAA 57.461 33.333 0.00 0.00 0.00 2.24
358 359 5.902681 AGGAACAAAAGGCTGAAAAGTAAC 58.097 37.500 0.00 0.00 0.00 2.50
359 360 5.420739 AGGAACAAAAGGCTGAAAAGTAACA 59.579 36.000 0.00 0.00 0.00 2.41
360 361 5.518847 GGAACAAAAGGCTGAAAAGTAACAC 59.481 40.000 0.00 0.00 0.00 3.32
361 362 4.668289 ACAAAAGGCTGAAAAGTAACACG 58.332 39.130 0.00 0.00 0.00 4.49
362 363 3.982576 AAAGGCTGAAAAGTAACACGG 57.017 42.857 0.00 0.00 0.00 4.94
363 364 1.892209 AGGCTGAAAAGTAACACGGG 58.108 50.000 0.00 0.00 0.00 5.28
364 365 0.240145 GGCTGAAAAGTAACACGGGC 59.760 55.000 0.00 0.00 0.00 6.13
365 366 0.240145 GCTGAAAAGTAACACGGGCC 59.760 55.000 0.00 0.00 0.00 5.80
366 367 1.600023 CTGAAAAGTAACACGGGCCA 58.400 50.000 4.39 0.00 0.00 5.36
367 368 1.950909 CTGAAAAGTAACACGGGCCAA 59.049 47.619 4.39 0.00 0.00 4.52
368 369 1.677052 TGAAAAGTAACACGGGCCAAC 59.323 47.619 4.39 0.00 0.00 3.77
369 370 1.001048 GAAAAGTAACACGGGCCAACC 60.001 52.381 4.39 0.00 0.00 3.77
403 404 2.715536 CCAGGCCGGCCTTTATAAC 58.284 57.895 45.58 16.76 45.70 1.89
404 405 0.182775 CCAGGCCGGCCTTTATAACT 59.817 55.000 45.58 20.61 45.70 2.24
405 406 1.308998 CAGGCCGGCCTTTATAACTG 58.691 55.000 45.58 27.91 45.70 3.16
406 407 0.465642 AGGCCGGCCTTTATAACTGC 60.466 55.000 42.84 12.88 45.70 4.40
407 408 1.452953 GGCCGGCCTTTATAACTGCC 61.453 60.000 38.76 6.46 40.54 4.85
408 409 0.750182 GCCGGCCTTTATAACTGCCA 60.750 55.000 18.11 0.00 44.22 4.92
409 410 1.981256 CCGGCCTTTATAACTGCCAT 58.019 50.000 19.38 0.00 44.22 4.40
410 411 1.608590 CCGGCCTTTATAACTGCCATG 59.391 52.381 19.38 9.58 44.22 3.66
411 412 1.001378 CGGCCTTTATAACTGCCATGC 60.001 52.381 19.38 0.52 44.22 4.06
412 413 2.310538 GGCCTTTATAACTGCCATGCT 58.689 47.619 16.14 0.00 43.46 3.79
413 414 2.035066 GGCCTTTATAACTGCCATGCTG 59.965 50.000 16.14 0.00 43.46 4.41
414 415 2.035066 GCCTTTATAACTGCCATGCTGG 59.965 50.000 0.00 0.00 41.55 4.85
415 416 2.624838 CCTTTATAACTGCCATGCTGGG 59.375 50.000 4.65 0.00 38.19 4.45
423 424 2.908940 CCATGCTGGGCCGATTCC 60.909 66.667 0.00 0.00 32.67 3.01
424 425 2.908940 CATGCTGGGCCGATTCCC 60.909 66.667 0.00 1.04 46.73 3.97
431 432 4.875713 GGCCGATTCCCATGCCGT 62.876 66.667 0.00 0.00 33.59 5.68
432 433 3.585990 GCCGATTCCCATGCCGTG 61.586 66.667 0.00 0.00 0.00 4.94
433 434 3.585990 CCGATTCCCATGCCGTGC 61.586 66.667 0.00 0.00 0.00 5.34
434 435 3.585990 CGATTCCCATGCCGTGCC 61.586 66.667 0.00 0.00 0.00 5.01
435 436 3.219198 GATTCCCATGCCGTGCCC 61.219 66.667 0.00 0.00 0.00 5.36
446 447 3.436924 CGTGCCCGGCCCTTTTAC 61.437 66.667 7.03 0.00 0.00 2.01
447 448 2.282603 GTGCCCGGCCCTTTTACA 60.283 61.111 7.03 0.00 0.00 2.41
448 449 2.034999 TGCCCGGCCCTTTTACAG 59.965 61.111 7.03 0.00 0.00 2.74
449 450 3.449227 GCCCGGCCCTTTTACAGC 61.449 66.667 0.00 0.00 0.00 4.40
450 451 2.754254 CCCGGCCCTTTTACAGCC 60.754 66.667 0.00 0.00 43.53 4.85
453 454 4.018409 GGCCCTTTTACAGCCAGG 57.982 61.111 0.00 0.00 46.34 4.45
454 455 2.351244 GGCCCTTTTACAGCCAGGC 61.351 63.158 1.84 1.84 46.34 4.85
455 456 2.351244 GCCCTTTTACAGCCAGGCC 61.351 63.158 8.22 0.00 34.23 5.19
456 457 1.076549 CCCTTTTACAGCCAGGCCA 59.923 57.895 8.22 0.00 0.00 5.36
457 458 0.967380 CCCTTTTACAGCCAGGCCAG 60.967 60.000 8.22 3.47 0.00 4.85
458 459 1.598701 CCTTTTACAGCCAGGCCAGC 61.599 60.000 8.22 7.78 0.00 4.85
459 460 1.598701 CTTTTACAGCCAGGCCAGCC 61.599 60.000 8.22 0.00 0.00 4.85
460 461 3.583882 TTTACAGCCAGGCCAGCCC 62.584 63.158 8.22 0.00 36.58 5.19
475 476 4.213630 CCCATGTGGCCAGGTTTT 57.786 55.556 5.11 0.00 0.00 2.43
476 477 1.974543 CCCATGTGGCCAGGTTTTC 59.025 57.895 5.11 0.00 0.00 2.29
477 478 0.831288 CCCATGTGGCCAGGTTTTCA 60.831 55.000 5.11 0.00 0.00 2.69
478 479 1.269012 CCATGTGGCCAGGTTTTCAT 58.731 50.000 5.11 1.04 0.00 2.57
479 480 1.205417 CCATGTGGCCAGGTTTTCATC 59.795 52.381 5.11 0.00 0.00 2.92
480 481 1.205417 CATGTGGCCAGGTTTTCATCC 59.795 52.381 5.11 0.00 0.00 3.51
481 482 0.541764 TGTGGCCAGGTTTTCATCCC 60.542 55.000 5.11 0.00 0.00 3.85
482 483 1.078347 TGGCCAGGTTTTCATCCCC 59.922 57.895 0.00 0.00 0.00 4.81
483 484 1.078347 GGCCAGGTTTTCATCCCCA 59.922 57.895 0.00 0.00 0.00 4.96
484 485 1.257750 GGCCAGGTTTTCATCCCCAC 61.258 60.000 0.00 0.00 0.00 4.61
485 486 1.257750 GCCAGGTTTTCATCCCCACC 61.258 60.000 0.00 0.00 0.00 4.61
486 487 0.409484 CCAGGTTTTCATCCCCACCT 59.591 55.000 0.00 0.00 40.50 4.00
487 488 1.638589 CCAGGTTTTCATCCCCACCTA 59.361 52.381 0.00 0.00 37.56 3.08
488 489 2.042433 CCAGGTTTTCATCCCCACCTAA 59.958 50.000 0.00 0.00 37.56 2.69
489 490 3.501385 CCAGGTTTTCATCCCCACCTAAA 60.501 47.826 0.00 0.00 37.56 1.85
490 491 4.156477 CAGGTTTTCATCCCCACCTAAAA 58.844 43.478 0.00 0.00 37.56 1.52
491 492 4.591072 CAGGTTTTCATCCCCACCTAAAAA 59.409 41.667 0.00 0.00 37.56 1.94
517 518 7.741554 AAACTATTCTTCTCCTCATACAGGT 57.258 36.000 0.00 0.00 43.95 4.00
518 519 6.723298 ACTATTCTTCTCCTCATACAGGTG 57.277 41.667 0.00 0.00 43.95 4.00
519 520 5.600484 ACTATTCTTCTCCTCATACAGGTGG 59.400 44.000 0.00 0.00 43.95 4.61
520 521 2.111384 TCTTCTCCTCATACAGGTGGC 58.889 52.381 0.00 0.00 43.95 5.01
521 522 1.139853 CTTCTCCTCATACAGGTGGCC 59.860 57.143 0.00 0.00 43.95 5.36
522 523 0.339859 TCTCCTCATACAGGTGGCCT 59.660 55.000 3.32 0.00 43.95 5.19
523 524 0.755686 CTCCTCATACAGGTGGCCTC 59.244 60.000 3.32 0.00 43.95 4.70
524 525 0.042581 TCCTCATACAGGTGGCCTCA 59.957 55.000 3.32 0.00 43.95 3.86
525 526 1.135094 CCTCATACAGGTGGCCTCAT 58.865 55.000 3.32 0.00 37.53 2.90
526 527 2.090775 TCCTCATACAGGTGGCCTCATA 60.091 50.000 3.32 0.00 43.95 2.15
527 528 2.909006 CCTCATACAGGTGGCCTCATAT 59.091 50.000 3.32 0.00 37.53 1.78
528 529 3.328931 CCTCATACAGGTGGCCTCATATT 59.671 47.826 3.32 0.00 37.53 1.28
529 530 4.321718 CTCATACAGGTGGCCTCATATTG 58.678 47.826 3.32 0.33 0.00 1.90
530 531 2.638480 TACAGGTGGCCTCATATTGC 57.362 50.000 3.32 0.00 0.00 3.56
531 532 0.921896 ACAGGTGGCCTCATATTGCT 59.078 50.000 3.32 0.00 0.00 3.91
532 533 1.133976 ACAGGTGGCCTCATATTGCTC 60.134 52.381 3.32 0.00 0.00 4.26
533 534 1.134007 CAGGTGGCCTCATATTGCTCA 60.134 52.381 3.32 0.00 0.00 4.26
534 535 1.142465 AGGTGGCCTCATATTGCTCAG 59.858 52.381 3.32 0.00 0.00 3.35
535 536 1.133976 GGTGGCCTCATATTGCTCAGT 60.134 52.381 3.32 0.00 0.00 3.41
536 537 1.945394 GTGGCCTCATATTGCTCAGTG 59.055 52.381 3.32 0.00 0.00 3.66
537 538 1.134007 TGGCCTCATATTGCTCAGTGG 60.134 52.381 3.32 0.00 0.00 4.00
538 539 1.133976 GGCCTCATATTGCTCAGTGGT 60.134 52.381 0.00 0.00 0.00 4.16
539 540 1.945394 GCCTCATATTGCTCAGTGGTG 59.055 52.381 0.00 0.00 0.00 4.17
540 541 2.420547 GCCTCATATTGCTCAGTGGTGA 60.421 50.000 0.00 0.00 0.00 4.02
541 542 3.746751 GCCTCATATTGCTCAGTGGTGAT 60.747 47.826 0.00 0.00 30.18 3.06
542 543 4.503817 GCCTCATATTGCTCAGTGGTGATA 60.504 45.833 0.00 0.00 30.18 2.15
543 544 4.993584 CCTCATATTGCTCAGTGGTGATAC 59.006 45.833 0.00 0.00 30.18 2.24
544 545 4.960938 TCATATTGCTCAGTGGTGATACC 58.039 43.478 0.00 0.00 39.22 2.73
545 546 4.655649 TCATATTGCTCAGTGGTGATACCT 59.344 41.667 0.00 0.00 39.58 3.08
546 547 5.838521 TCATATTGCTCAGTGGTGATACCTA 59.161 40.000 0.00 0.00 39.58 3.08
547 548 4.679373 ATTGCTCAGTGGTGATACCTAG 57.321 45.455 0.00 0.00 39.58 3.02
548 549 3.382083 TGCTCAGTGGTGATACCTAGA 57.618 47.619 0.00 0.00 39.58 2.43
549 550 3.916035 TGCTCAGTGGTGATACCTAGAT 58.084 45.455 0.00 0.00 39.58 1.98
550 551 3.638627 TGCTCAGTGGTGATACCTAGATG 59.361 47.826 0.00 0.00 39.58 2.90
551 552 3.891977 GCTCAGTGGTGATACCTAGATGA 59.108 47.826 0.00 0.00 39.58 2.92
552 553 4.526262 GCTCAGTGGTGATACCTAGATGAT 59.474 45.833 0.00 0.00 39.58 2.45
553 554 5.712446 GCTCAGTGGTGATACCTAGATGATA 59.288 44.000 0.00 0.00 39.58 2.15
554 555 6.379703 GCTCAGTGGTGATACCTAGATGATAT 59.620 42.308 0.00 0.00 39.58 1.63
555 556 7.416213 GCTCAGTGGTGATACCTAGATGATATC 60.416 44.444 0.00 0.00 39.58 1.63
556 557 7.470192 TCAGTGGTGATACCTAGATGATATCA 58.530 38.462 8.10 8.10 39.58 2.15
557 558 7.950124 TCAGTGGTGATACCTAGATGATATCAA 59.050 37.037 9.99 0.00 39.58 2.57
558 559 8.249638 CAGTGGTGATACCTAGATGATATCAAG 58.750 40.741 9.99 2.63 39.58 3.02
559 560 8.173412 AGTGGTGATACCTAGATGATATCAAGA 58.827 37.037 9.99 0.00 39.58 3.02
560 561 8.465999 GTGGTGATACCTAGATGATATCAAGAG 58.534 40.741 9.99 7.14 39.58 2.85
561 562 7.617329 TGGTGATACCTAGATGATATCAAGAGG 59.383 40.741 21.09 21.09 39.58 3.69
562 563 7.836685 GGTGATACCTAGATGATATCAAGAGGA 59.163 40.741 26.11 15.65 37.14 3.71
563 564 8.902806 GTGATACCTAGATGATATCAAGAGGAG 58.097 40.741 26.11 13.69 37.14 3.69
564 565 8.840751 TGATACCTAGATGATATCAAGAGGAGA 58.159 37.037 26.11 17.72 33.45 3.71
565 566 9.693739 GATACCTAGATGATATCAAGAGGAGAA 57.306 37.037 26.11 16.17 32.99 2.87
566 567 7.775053 ACCTAGATGATATCAAGAGGAGAAC 57.225 40.000 26.11 6.89 32.99 3.01
567 568 6.723977 ACCTAGATGATATCAAGAGGAGAACC 59.276 42.308 26.11 0.00 32.99 3.62
568 569 5.720371 AGATGATATCAAGAGGAGAACCG 57.280 43.478 9.99 0.00 41.83 4.44
569 570 4.526262 AGATGATATCAAGAGGAGAACCGG 59.474 45.833 9.99 0.00 41.83 5.28
570 571 2.965831 TGATATCAAGAGGAGAACCGGG 59.034 50.000 6.32 0.00 41.83 5.73
571 572 1.789523 TATCAAGAGGAGAACCGGGG 58.210 55.000 6.32 0.00 41.83 5.73
572 573 1.627297 ATCAAGAGGAGAACCGGGGC 61.627 60.000 6.32 0.00 41.83 5.80
573 574 2.203938 AAGAGGAGAACCGGGGCA 60.204 61.111 6.32 0.00 41.83 5.36
574 575 2.294078 AAGAGGAGAACCGGGGCAG 61.294 63.158 6.32 0.00 41.83 4.85
575 576 3.787001 GAGGAGAACCGGGGCAGG 61.787 72.222 6.32 0.00 41.83 4.85
582 583 3.416880 ACCGGGGCAGGTTATGGG 61.417 66.667 6.32 0.00 43.00 4.00
583 584 4.204028 CCGGGGCAGGTTATGGGG 62.204 72.222 0.00 0.00 0.00 4.96
584 585 4.894896 CGGGGCAGGTTATGGGGC 62.895 72.222 0.00 0.00 0.00 5.80
585 586 3.429580 GGGGCAGGTTATGGGGCT 61.430 66.667 0.00 0.00 0.00 5.19
586 587 2.082414 GGGGCAGGTTATGGGGCTA 61.082 63.158 0.00 0.00 0.00 3.93
587 588 1.435346 GGGGCAGGTTATGGGGCTAT 61.435 60.000 0.00 0.00 0.00 2.97
588 589 0.038310 GGGCAGGTTATGGGGCTATC 59.962 60.000 0.00 0.00 0.00 2.08
589 590 0.771127 GGCAGGTTATGGGGCTATCA 59.229 55.000 0.00 0.00 0.00 2.15
590 591 1.355720 GGCAGGTTATGGGGCTATCAT 59.644 52.381 0.00 0.00 0.00 2.45
591 592 2.576191 GGCAGGTTATGGGGCTATCATA 59.424 50.000 0.00 0.00 0.00 2.15
592 593 3.610911 GCAGGTTATGGGGCTATCATAC 58.389 50.000 0.00 0.00 0.00 2.39
593 594 3.009033 GCAGGTTATGGGGCTATCATACA 59.991 47.826 0.00 0.00 0.00 2.29
594 595 4.324563 GCAGGTTATGGGGCTATCATACAT 60.325 45.833 0.00 0.00 0.00 2.29
595 596 5.188434 CAGGTTATGGGGCTATCATACATG 58.812 45.833 0.00 0.00 0.00 3.21
596 597 5.045651 CAGGTTATGGGGCTATCATACATGA 60.046 44.000 0.00 0.00 41.70 3.07
597 598 5.551583 AGGTTATGGGGCTATCATACATGAA 59.448 40.000 0.00 0.00 40.69 2.57
598 599 6.045459 AGGTTATGGGGCTATCATACATGAAA 59.955 38.462 0.00 0.00 40.69 2.69
599 600 6.891908 GGTTATGGGGCTATCATACATGAAAT 59.108 38.462 0.00 0.00 40.69 2.17
600 601 7.397192 GGTTATGGGGCTATCATACATGAAATT 59.603 37.037 0.00 0.00 40.69 1.82
601 602 8.462016 GTTATGGGGCTATCATACATGAAATTC 58.538 37.037 0.00 0.00 40.69 2.17
602 603 6.204852 TGGGGCTATCATACATGAAATTCT 57.795 37.500 0.00 0.00 40.69 2.40
603 604 7.328404 TGGGGCTATCATACATGAAATTCTA 57.672 36.000 0.00 0.00 40.69 2.10
604 605 7.397221 TGGGGCTATCATACATGAAATTCTAG 58.603 38.462 0.00 0.00 40.69 2.43
605 606 7.237471 TGGGGCTATCATACATGAAATTCTAGA 59.763 37.037 0.00 0.00 40.69 2.43
606 607 7.768120 GGGGCTATCATACATGAAATTCTAGAG 59.232 40.741 0.00 0.00 40.69 2.43
607 608 7.279758 GGGCTATCATACATGAAATTCTAGAGC 59.720 40.741 0.00 0.00 40.69 4.09
608 609 7.821359 GGCTATCATACATGAAATTCTAGAGCA 59.179 37.037 0.00 0.00 40.69 4.26
609 610 8.655092 GCTATCATACATGAAATTCTAGAGCAC 58.345 37.037 0.00 0.00 40.69 4.40
610 611 9.926158 CTATCATACATGAAATTCTAGAGCACT 57.074 33.333 0.00 0.00 40.69 4.40
612 613 9.624373 ATCATACATGAAATTCTAGAGCACTTT 57.376 29.630 0.00 0.00 40.69 2.66
617 618 9.593134 ACATGAAATTCTAGAGCACTTTACTAG 57.407 33.333 0.00 0.00 36.10 2.57
618 619 9.593134 CATGAAATTCTAGAGCACTTTACTAGT 57.407 33.333 0.00 0.00 37.68 2.57
620 621 9.998106 TGAAATTCTAGAGCACTTTACTAGTTT 57.002 29.630 0.00 0.00 33.85 2.66
627 628 7.813852 AGAGCACTTTACTAGTTTTACATCG 57.186 36.000 0.00 0.00 33.85 3.84
628 629 7.376615 AGAGCACTTTACTAGTTTTACATCGT 58.623 34.615 0.00 0.00 33.85 3.73
629 630 7.328737 AGAGCACTTTACTAGTTTTACATCGTG 59.671 37.037 0.00 0.00 33.85 4.35
630 631 6.927381 AGCACTTTACTAGTTTTACATCGTGT 59.073 34.615 0.00 0.00 33.85 4.49
631 632 8.084073 AGCACTTTACTAGTTTTACATCGTGTA 58.916 33.333 0.00 0.00 33.85 2.90
632 633 8.702438 GCACTTTACTAGTTTTACATCGTGTAA 58.298 33.333 0.00 6.52 36.66 2.41
669 670 8.507470 AATTTAAGAACTTGAAATGTCGAAGC 57.493 30.769 0.00 0.00 0.00 3.86
670 671 6.861065 TTAAGAACTTGAAATGTCGAAGCT 57.139 33.333 0.00 0.00 0.00 3.74
671 672 4.999751 AGAACTTGAAATGTCGAAGCTC 57.000 40.909 0.00 0.00 0.00 4.09
672 673 4.380531 AGAACTTGAAATGTCGAAGCTCA 58.619 39.130 0.00 0.00 0.00 4.26
673 674 4.212214 AGAACTTGAAATGTCGAAGCTCAC 59.788 41.667 0.00 0.00 0.00 3.51
674 675 3.466836 ACTTGAAATGTCGAAGCTCACA 58.533 40.909 0.00 0.00 0.00 3.58
675 676 3.876914 ACTTGAAATGTCGAAGCTCACAA 59.123 39.130 0.00 0.00 0.00 3.33
676 677 4.516698 ACTTGAAATGTCGAAGCTCACAAT 59.483 37.500 0.00 0.00 0.00 2.71
677 678 4.668576 TGAAATGTCGAAGCTCACAATC 57.331 40.909 0.00 0.00 0.00 2.67
678 679 4.318332 TGAAATGTCGAAGCTCACAATCT 58.682 39.130 0.00 0.00 0.00 2.40
679 680 5.478407 TGAAATGTCGAAGCTCACAATCTA 58.522 37.500 0.00 0.00 0.00 1.98
680 681 5.578336 TGAAATGTCGAAGCTCACAATCTAG 59.422 40.000 0.00 0.00 0.00 2.43
681 682 2.881074 TGTCGAAGCTCACAATCTAGC 58.119 47.619 0.00 0.00 39.08 3.42
682 683 2.231235 TGTCGAAGCTCACAATCTAGCA 59.769 45.455 0.00 0.00 41.32 3.49
683 684 3.254060 GTCGAAGCTCACAATCTAGCAA 58.746 45.455 0.00 0.00 41.32 3.91
684 685 3.679980 GTCGAAGCTCACAATCTAGCAAA 59.320 43.478 0.00 0.00 41.32 3.68
685 686 3.928992 TCGAAGCTCACAATCTAGCAAAG 59.071 43.478 0.00 0.00 41.32 2.77
686 687 3.484886 CGAAGCTCACAATCTAGCAAAGC 60.485 47.826 0.00 0.00 41.32 3.51
687 688 3.063510 AGCTCACAATCTAGCAAAGCA 57.936 42.857 0.00 0.00 41.32 3.91
688 689 3.618351 AGCTCACAATCTAGCAAAGCAT 58.382 40.909 0.00 0.00 41.32 3.79
689 690 4.015084 AGCTCACAATCTAGCAAAGCATT 58.985 39.130 0.00 0.00 41.32 3.56
690 691 5.188434 AGCTCACAATCTAGCAAAGCATTA 58.812 37.500 0.00 0.00 41.32 1.90
691 692 5.649395 AGCTCACAATCTAGCAAAGCATTAA 59.351 36.000 0.00 0.00 41.32 1.40
692 693 5.741040 GCTCACAATCTAGCAAAGCATTAAC 59.259 40.000 0.00 0.00 38.63 2.01
693 694 6.404074 GCTCACAATCTAGCAAAGCATTAACT 60.404 38.462 0.00 0.00 38.63 2.24
694 695 7.201644 GCTCACAATCTAGCAAAGCATTAACTA 60.202 37.037 0.00 0.00 38.63 2.24
695 696 8.560355 TCACAATCTAGCAAAGCATTAACTAA 57.440 30.769 0.00 0.00 0.00 2.24
696 697 9.008965 TCACAATCTAGCAAAGCATTAACTAAA 57.991 29.630 0.00 0.00 0.00 1.85
697 698 9.624697 CACAATCTAGCAAAGCATTAACTAAAA 57.375 29.630 0.00 0.00 0.00 1.52
698 699 9.626045 ACAATCTAGCAAAGCATTAACTAAAAC 57.374 29.630 0.00 0.00 0.00 2.43
699 700 9.846248 CAATCTAGCAAAGCATTAACTAAAACT 57.154 29.630 0.00 0.00 0.00 2.66
703 704 9.774742 CTAGCAAAGCATTAACTAAAACTAAGG 57.225 33.333 0.00 0.00 0.00 2.69
704 705 7.090808 AGCAAAGCATTAACTAAAACTAAGGC 58.909 34.615 0.00 0.00 35.57 4.35
705 706 7.039714 AGCAAAGCATTAACTAAAACTAAGGCT 60.040 33.333 0.00 0.00 44.53 4.58
708 709 7.158099 AGCATTAACTAAAACTAAGGCTTGG 57.842 36.000 10.69 9.94 41.06 3.61
709 710 6.719829 AGCATTAACTAAAACTAAGGCTTGGT 59.280 34.615 10.78 10.78 41.06 3.67
710 711 7.027760 GCATTAACTAAAACTAAGGCTTGGTC 58.972 38.462 16.97 0.00 33.27 4.02
711 712 6.790285 TTAACTAAAACTAAGGCTTGGTCG 57.210 37.500 16.97 8.39 0.00 4.79
712 713 3.072211 ACTAAAACTAAGGCTTGGTCGC 58.928 45.455 16.97 0.00 0.00 5.19
720 721 4.557942 GCTTGGTCGCCATGTTTG 57.442 55.556 11.45 0.00 31.53 2.93
721 722 1.080569 GCTTGGTCGCCATGTTTGG 60.081 57.895 11.45 0.00 46.66 3.28
722 723 1.805428 GCTTGGTCGCCATGTTTGGT 61.805 55.000 11.45 0.00 45.57 3.67
723 724 0.673437 CTTGGTCGCCATGTTTGGTT 59.327 50.000 0.00 0.00 45.57 3.67
724 725 0.387202 TTGGTCGCCATGTTTGGTTG 59.613 50.000 0.00 0.00 45.57 3.77
725 726 1.288752 GGTCGCCATGTTTGGTTGG 59.711 57.895 0.00 0.00 45.57 3.77
726 727 1.288752 GTCGCCATGTTTGGTTGGG 59.711 57.895 0.00 0.00 45.57 4.12
727 728 1.152652 TCGCCATGTTTGGTTGGGT 60.153 52.632 0.00 0.00 45.57 4.51
728 729 1.175983 TCGCCATGTTTGGTTGGGTC 61.176 55.000 0.00 0.00 45.57 4.46
729 730 1.459455 CGCCATGTTTGGTTGGGTCA 61.459 55.000 0.00 0.00 45.57 4.02
730 731 0.033366 GCCATGTTTGGTTGGGTCAC 59.967 55.000 0.00 0.00 45.57 3.67
731 732 0.678950 CCATGTTTGGTTGGGTCACC 59.321 55.000 0.00 0.00 38.30 4.02
732 733 0.678950 CATGTTTGGTTGGGTCACCC 59.321 55.000 5.63 5.63 45.71 4.61
743 744 2.696864 GGTCACCCCTGGATCTTCA 58.303 57.895 0.00 0.00 0.00 3.02
744 745 1.216990 GGTCACCCCTGGATCTTCAT 58.783 55.000 0.00 0.00 0.00 2.57
745 746 1.566231 GGTCACCCCTGGATCTTCATT 59.434 52.381 0.00 0.00 0.00 2.57
746 747 2.024941 GGTCACCCCTGGATCTTCATTT 60.025 50.000 0.00 0.00 0.00 2.32
747 748 3.282885 GTCACCCCTGGATCTTCATTTC 58.717 50.000 0.00 0.00 0.00 2.17
748 749 2.092968 TCACCCCTGGATCTTCATTTCG 60.093 50.000 0.00 0.00 0.00 3.46
749 750 1.916181 ACCCCTGGATCTTCATTTCGT 59.084 47.619 0.00 0.00 0.00 3.85
750 751 2.092914 ACCCCTGGATCTTCATTTCGTC 60.093 50.000 0.00 0.00 0.00 4.20
751 752 2.565841 CCCTGGATCTTCATTTCGTCC 58.434 52.381 0.00 0.00 0.00 4.79
752 753 2.205074 CCTGGATCTTCATTTCGTCCG 58.795 52.381 0.00 0.00 0.00 4.79
753 754 2.418746 CCTGGATCTTCATTTCGTCCGT 60.419 50.000 0.00 0.00 0.00 4.69
754 755 2.604914 CTGGATCTTCATTTCGTCCGTG 59.395 50.000 0.00 0.00 0.00 4.94
755 756 2.028476 TGGATCTTCATTTCGTCCGTGT 60.028 45.455 0.00 0.00 0.00 4.49
756 757 3.193903 TGGATCTTCATTTCGTCCGTGTA 59.806 43.478 0.00 0.00 0.00 2.90
757 758 4.178540 GGATCTTCATTTCGTCCGTGTAA 58.821 43.478 0.00 0.00 0.00 2.41
758 759 4.628333 GGATCTTCATTTCGTCCGTGTAAA 59.372 41.667 0.00 0.00 0.00 2.01
759 760 5.293569 GGATCTTCATTTCGTCCGTGTAAAT 59.706 40.000 0.00 0.00 0.00 1.40
760 761 6.183360 GGATCTTCATTTCGTCCGTGTAAATT 60.183 38.462 0.00 0.00 0.00 1.82
761 762 7.010738 GGATCTTCATTTCGTCCGTGTAAATTA 59.989 37.037 0.00 0.00 0.00 1.40
762 763 7.837202 TCTTCATTTCGTCCGTGTAAATTAT 57.163 32.000 0.00 0.00 0.00 1.28
763 764 7.680982 TCTTCATTTCGTCCGTGTAAATTATG 58.319 34.615 0.00 0.00 0.00 1.90
764 765 6.971527 TCATTTCGTCCGTGTAAATTATGT 57.028 33.333 0.00 0.00 0.00 2.29
765 766 6.767080 TCATTTCGTCCGTGTAAATTATGTG 58.233 36.000 0.00 0.00 0.00 3.21
766 767 6.590677 TCATTTCGTCCGTGTAAATTATGTGA 59.409 34.615 0.00 0.00 0.00 3.58
767 768 5.766702 TTCGTCCGTGTAAATTATGTGAC 57.233 39.130 0.00 0.00 0.00 3.67
768 769 3.853103 TCGTCCGTGTAAATTATGTGACG 59.147 43.478 0.00 0.00 43.98 4.35
769 770 3.000476 CGTCCGTGTAAATTATGTGACGG 60.000 47.826 0.00 0.00 46.09 4.79
773 774 5.959652 CGTGTAAATTATGTGACGGATCA 57.040 39.130 0.00 0.00 0.00 2.92
774 775 6.339194 CGTGTAAATTATGTGACGGATCAA 57.661 37.500 0.00 0.00 36.31 2.57
775 776 6.943981 CGTGTAAATTATGTGACGGATCAAT 58.056 36.000 0.00 0.00 36.31 2.57
776 777 8.067780 CGTGTAAATTATGTGACGGATCAATA 57.932 34.615 0.00 0.00 36.31 1.90
777 778 8.544597 CGTGTAAATTATGTGACGGATCAATAA 58.455 33.333 0.00 0.00 36.31 1.40
782 783 8.731275 AATTATGTGACGGATCAATAAAGTGA 57.269 30.769 0.00 0.00 36.31 3.41
783 784 8.908786 ATTATGTGACGGATCAATAAAGTGAT 57.091 30.769 0.00 0.00 41.01 3.06
784 785 8.731275 TTATGTGACGGATCAATAAAGTGATT 57.269 30.769 0.00 0.00 38.38 2.57
785 786 6.421377 TGTGACGGATCAATAAAGTGATTG 57.579 37.500 0.00 0.00 38.38 2.67
786 787 5.937540 TGTGACGGATCAATAAAGTGATTGT 59.062 36.000 0.00 0.00 38.38 2.71
787 788 6.092122 TGTGACGGATCAATAAAGTGATTGTC 59.908 38.462 14.53 14.53 40.50 3.18
788 789 6.313905 GTGACGGATCAATAAAGTGATTGTCT 59.686 38.462 18.71 0.00 40.61 3.41
789 790 7.491372 GTGACGGATCAATAAAGTGATTGTCTA 59.509 37.037 18.71 9.35 40.61 2.59
790 791 8.038351 TGACGGATCAATAAAGTGATTGTCTAA 58.962 33.333 18.71 5.93 40.61 2.10
791 792 8.786826 ACGGATCAATAAAGTGATTGTCTAAA 57.213 30.769 0.00 0.00 38.38 1.85
792 793 9.226606 ACGGATCAATAAAGTGATTGTCTAAAA 57.773 29.630 0.00 0.00 38.38 1.52
951 954 3.805207 AGTTTGAAAGTCGGTAAGCTGT 58.195 40.909 0.00 0.00 0.00 4.40
961 974 4.096003 TAAGCTGTGCCGCCCCTC 62.096 66.667 0.00 0.00 0.00 4.30
983 996 4.168291 CCTCCGAGGCTCCCTTGC 62.168 72.222 9.32 0.00 33.78 4.01
1095 1108 3.752339 AACCGCGTCTACGACCCC 61.752 66.667 4.92 0.00 43.02 4.95
1246 1259 3.009115 CCCTCTTCCGCCCCAAGA 61.009 66.667 0.00 0.00 0.00 3.02
1313 1326 2.354773 CGTAAGCGCGATCTCCCC 60.355 66.667 12.10 0.00 0.00 4.81
1320 1341 1.830408 CGCGATCTCCCCTCCTTCT 60.830 63.158 0.00 0.00 0.00 2.85
1324 1345 0.105913 GATCTCCCCTCCTTCTCCGT 60.106 60.000 0.00 0.00 0.00 4.69
1325 1346 0.340208 ATCTCCCCTCCTTCTCCGTT 59.660 55.000 0.00 0.00 0.00 4.44
1328 1349 2.722201 CCCCTCCTTCTCCGTTCCG 61.722 68.421 0.00 0.00 0.00 4.30
1341 1362 1.140407 CGTTCCGTCCTCGATGCTTC 61.140 60.000 0.00 0.00 39.71 3.86
1346 1367 0.736325 CGTCCTCGATGCTTCGGTTT 60.736 55.000 20.35 0.00 45.53 3.27
1351 1372 2.099263 CCTCGATGCTTCGGTTTCTCTA 59.901 50.000 20.35 0.00 45.53 2.43
1363 1384 2.678336 GGTTTCTCTACATTTGCTCGGG 59.322 50.000 0.00 0.00 0.00 5.14
1376 1397 1.065709 TGCTCGGGGTAACTTGGATTC 60.066 52.381 0.00 0.00 0.00 2.52
1397 1418 1.531739 CTAGATCCTCCCTGCGCTCC 61.532 65.000 9.73 0.00 0.00 4.70
1399 1420 2.688666 ATCCTCCCTGCGCTCCAA 60.689 61.111 9.73 0.00 0.00 3.53
1423 1444 2.643551 CTTGTGGAAATGCGGGAGTAT 58.356 47.619 0.00 0.00 36.47 2.12
1427 1448 1.557371 TGGAAATGCGGGAGTATGTGA 59.443 47.619 0.00 0.00 34.61 3.58
1488 1509 0.681175 GCACCATCTGTTTTGGCCTT 59.319 50.000 3.32 0.00 37.81 4.35
1498 1519 0.686224 TTTTGGCCTTTGCTGGATGG 59.314 50.000 3.32 0.00 37.74 3.51
1526 1547 2.014128 GTTGGTTGGTATGATCCGTGG 58.986 52.381 0.00 0.00 0.00 4.94
1535 1556 0.749454 ATGATCCGTGGGCTTTCTGC 60.749 55.000 0.00 0.00 41.94 4.26
1554 1575 6.530913 TCTGCGCAATTTATTGATCTAGTC 57.469 37.500 13.05 0.00 40.14 2.59
1555 1576 6.048509 TCTGCGCAATTTATTGATCTAGTCA 58.951 36.000 13.05 0.00 40.14 3.41
1585 1614 2.413351 GACGATGCTGCTCGGCTA 59.587 61.111 19.94 0.00 43.45 3.93
1646 1675 5.772825 TGTGACAAAGGGAAAGATTGAAG 57.227 39.130 0.00 0.00 0.00 3.02
1653 1682 6.494835 ACAAAGGGAAAGATTGAAGCTAACAT 59.505 34.615 0.00 0.00 0.00 2.71
1659 1688 3.535561 AGATTGAAGCTAACATGGACCG 58.464 45.455 0.00 0.00 0.00 4.79
1668 1697 0.327924 AACATGGACCGATGCCTTCA 59.672 50.000 0.00 0.00 0.00 3.02
1673 1702 1.557371 TGGACCGATGCCTTCACAATA 59.443 47.619 0.00 0.00 0.00 1.90
1729 1758 4.079665 GCGTGAGGGAAGTTTTCATAAC 57.920 45.455 0.00 0.00 0.00 1.89
1732 1761 3.762288 GTGAGGGAAGTTTTCATAACCCC 59.238 47.826 0.00 0.00 38.22 4.95
1736 1765 3.509967 GGGAAGTTTTCATAACCCCACAG 59.490 47.826 0.00 0.00 32.77 3.66
1857 1886 5.920273 AGTCGTGGTAAAGAAAATGCAAATG 59.080 36.000 0.00 0.00 0.00 2.32
1941 1998 7.310664 TCATCAAGCATCTCTGAAATTTCAAC 58.689 34.615 20.82 7.41 36.64 3.18
2109 2167 3.228188 ACTCCAAGAAGATGTTTGGCA 57.772 42.857 0.00 0.00 42.82 4.92
2140 2198 6.077993 GGAATGCCTCCTATAAAAGGGAAAT 58.922 40.000 0.00 0.00 46.55 2.17
2296 2354 1.037493 AGCGACACCACACTTCACTA 58.963 50.000 0.00 0.00 0.00 2.74
2342 2400 8.032952 TGACTGCATTTACATTTTAGAGACAG 57.967 34.615 0.00 0.00 0.00 3.51
2367 2425 4.843728 TGGTTATTGCCTTAAGGAGACAG 58.156 43.478 26.21 0.00 37.39 3.51
2389 2447 6.888632 ACAGCATTATGAGAGTTTTGAAGGAT 59.111 34.615 0.00 0.00 0.00 3.24
2411 2469 8.472413 AGGATTATTTTGTGATTCATTGTCCAG 58.528 33.333 0.00 0.00 0.00 3.86
2600 2663 3.181497 GGTGCTAACATGTTGCTATGTGG 60.181 47.826 21.42 0.00 40.24 4.17
2601 2664 2.423185 TGCTAACATGTTGCTATGTGGC 59.577 45.455 21.42 7.08 40.24 5.01
2602 2665 2.223572 GCTAACATGTTGCTATGTGGCC 60.224 50.000 21.42 0.00 40.24 5.36
2603 2666 1.921982 AACATGTTGCTATGTGGCCA 58.078 45.000 11.07 0.00 40.24 5.36
2604 2667 1.466856 ACATGTTGCTATGTGGCCAG 58.533 50.000 5.11 0.00 39.68 4.85
2669 2732 3.873910 ACCAGACATGTGCCAGTATTAC 58.126 45.455 1.15 0.00 0.00 1.89
2694 2758 2.023673 TGGTTTCCAGCAGTGTGAAAG 58.976 47.619 5.29 0.00 0.00 2.62
2716 2780 0.246910 GACTTGTCGAGGGAAGGGAC 59.753 60.000 0.00 0.00 0.00 4.46
2862 2926 4.584638 ACTTGGCCAGGTGATATTTGTA 57.415 40.909 21.34 0.00 0.00 2.41
2893 2957 4.952335 CCCTATCAACTGAAAATGGAGCTT 59.048 41.667 0.00 0.00 0.00 3.74
2905 3328 2.031258 TGGAGCTTTGTGTGTTTCGA 57.969 45.000 0.00 0.00 0.00 3.71
2963 3386 9.916397 GTTAATTCACTGTCCATAAAAGTATCG 57.084 33.333 0.00 0.00 0.00 2.92
2984 3407 0.908198 ACTCCATCAGCCACCTCTTC 59.092 55.000 0.00 0.00 0.00 2.87
3022 3445 4.044308 TGGTAGCCCATTATCCTCTCAAA 58.956 43.478 0.00 0.00 35.17 2.69
3103 3526 4.336993 AGCACATTCGTTGTTTAGTTTCCA 59.663 37.500 0.00 0.00 36.00 3.53
3114 3537 8.504005 CGTTGTTTAGTTTCCATCTCAACTATT 58.496 33.333 0.00 0.00 35.80 1.73
3117 3540 7.610305 TGTTTAGTTTCCATCTCAACTATTCCC 59.390 37.037 0.00 0.00 35.80 3.97
3142 3565 4.544152 TCCCCCTAATTCTGAAAACTCCAT 59.456 41.667 0.00 0.00 0.00 3.41
3171 3594 4.503910 TGGTATTGGTTGAGACTTGATCG 58.496 43.478 0.00 0.00 0.00 3.69
3181 3604 1.022735 GACTTGATCGTCTCCGGCTA 58.977 55.000 0.00 0.00 33.95 3.93
3185 3608 1.399714 TGATCGTCTCCGGCTACAAT 58.600 50.000 0.00 0.00 33.95 2.71
3197 3620 4.649674 TCCGGCTACAATAGATGAAGAAGT 59.350 41.667 0.00 0.00 0.00 3.01
3243 3667 4.409247 AGGGCGGTATAACTCTGAGAAATT 59.591 41.667 12.44 0.00 0.00 1.82
3529 3953 1.400494 GTACCGTTGTTGCCATCATCC 59.600 52.381 0.00 0.00 0.00 3.51
3530 3954 1.305219 ACCGTTGTTGCCATCATCCG 61.305 55.000 0.00 0.00 0.00 4.18
3564 3988 3.366679 CCAAGCGAATTCTGAATGTTGCT 60.367 43.478 14.69 14.69 0.00 3.91
3576 4000 4.074259 TGAATGTTGCTGCTCTATGTTGT 58.926 39.130 0.00 0.00 0.00 3.32
3579 4003 3.475575 TGTTGCTGCTCTATGTTGTTGA 58.524 40.909 0.00 0.00 0.00 3.18
3580 4004 4.074259 TGTTGCTGCTCTATGTTGTTGAT 58.926 39.130 0.00 0.00 0.00 2.57
3583 4007 6.206438 TGTTGCTGCTCTATGTTGTTGATTTA 59.794 34.615 0.00 0.00 0.00 1.40
3584 4008 7.094248 TGTTGCTGCTCTATGTTGTTGATTTAT 60.094 33.333 0.00 0.00 0.00 1.40
3585 4009 8.397906 GTTGCTGCTCTATGTTGTTGATTTATA 58.602 33.333 0.00 0.00 0.00 0.98
3635 4059 2.575532 CTTCAGAACCTGCACTGGAAA 58.424 47.619 0.00 0.00 35.20 3.13
3641 4065 2.683211 ACCTGCACTGGAAAAAGGAT 57.317 45.000 0.00 0.00 0.00 3.24
3647 4071 1.273327 CACTGGAAAAAGGATGGGTGC 59.727 52.381 0.00 0.00 0.00 5.01
3683 4107 1.542492 AGCCAAACTTCATCTGCCTG 58.458 50.000 0.00 0.00 0.00 4.85
3716 4140 2.419673 CTGCGCCATCAGAACAAACATA 59.580 45.455 4.18 0.00 36.19 2.29
3860 4284 1.374343 CGCTCTACGGGCTGTACTCA 61.374 60.000 1.02 0.00 38.44 3.41
3992 4429 1.077429 CTCTAGGTTTGCCTGCCCC 60.077 63.158 0.00 0.00 46.47 5.80
3994 4431 1.379044 CTAGGTTTGCCTGCCCCTG 60.379 63.158 0.00 0.00 46.47 4.45
4062 4499 6.212888 AGCTCATCGATATGCATGTATGTA 57.787 37.500 19.43 0.00 32.76 2.29
4063 4500 6.038985 AGCTCATCGATATGCATGTATGTAC 58.961 40.000 19.43 2.03 32.76 2.90
4064 4501 5.807011 GCTCATCGATATGCATGTATGTACA 59.193 40.000 10.16 0.00 35.38 2.90
4121 4559 7.939782 TCTTTGTATCACTCTTTGCATTGAAA 58.060 30.769 0.00 0.00 0.00 2.69
4133 4571 8.035165 TCTTTGCATTGAAATTCAAATCATGG 57.965 30.769 12.75 8.84 40.12 3.66
4140 4578 4.157656 TGAAATTCAAATCATGGGACGGAC 59.842 41.667 0.00 0.00 0.00 4.79
4141 4579 2.869101 TTCAAATCATGGGACGGACA 57.131 45.000 0.00 0.00 0.00 4.02
4185 4624 1.191647 GTGTGCCGTACTGAAGAAACG 59.808 52.381 0.00 0.00 36.42 3.60
4212 4651 2.589492 CCCGATCAGAATGCGCGTC 61.589 63.158 8.43 1.95 34.76 5.19
4320 4759 8.052748 TGCTGGGTTGTTTATGTCTATATTTCT 58.947 33.333 0.00 0.00 0.00 2.52
4322 4761 9.396022 CTGGGTTGTTTATGTCTATATTTCTGT 57.604 33.333 0.00 0.00 0.00 3.41
4377 4816 6.093633 GTCGCAGGTCCACTCTTTTATTTTAT 59.906 38.462 0.00 0.00 0.00 1.40
4386 4832 7.670559 TCCACTCTTTTATTTTATTTTCCCGGA 59.329 33.333 0.73 0.00 0.00 5.14
4412 4858 3.549794 GAATGAGGTGAGGAATCCAAGG 58.450 50.000 0.61 0.00 0.00 3.61
4416 4862 1.081174 AGGTGAGGAATCCAAGGGAGA 59.919 52.381 0.61 0.00 34.05 3.71
4434 4882 2.890945 GAGAGAAGGGGAGCTGTATCTC 59.109 54.545 0.00 0.00 34.84 2.75
4449 4897 0.908198 ATCTCTGTCTCCCTTGTGGC 59.092 55.000 0.00 0.00 0.00 5.01
4451 4899 0.397941 CTCTGTCTCCCTTGTGGCAA 59.602 55.000 0.00 0.00 0.00 4.52
4549 4997 3.980646 TCTTGTTCCAAACGTCCATTG 57.019 42.857 0.00 0.00 0.00 2.82
4557 5005 2.491693 CCAAACGTCCATTGCCATTACT 59.508 45.455 0.00 0.00 0.00 2.24
4558 5006 3.500982 CAAACGTCCATTGCCATTACTG 58.499 45.455 0.00 0.00 0.00 2.74
4566 5014 3.183754 CATTGCCATTACTGTGTGCATG 58.816 45.455 0.00 0.00 0.00 4.06
4567 5015 2.197283 TGCCATTACTGTGTGCATGA 57.803 45.000 0.00 0.00 0.00 3.07
4568 5016 1.811965 TGCCATTACTGTGTGCATGAC 59.188 47.619 0.00 0.00 0.00 3.06
4592 5040 1.672145 GGAAGCAGTCGTTACCTCCAC 60.672 57.143 0.00 0.00 0.00 4.02
4594 5042 1.079336 GCAGTCGTTACCTCCACCC 60.079 63.158 0.00 0.00 0.00 4.61
4598 5046 0.668401 GTCGTTACCTCCACCCGTTG 60.668 60.000 0.00 0.00 0.00 4.10
4710 5162 4.230455 AGAAACAGGCAGGAGATAGCTAT 58.770 43.478 5.76 5.76 0.00 2.97
4748 5201 0.171007 CCAAATGGCGATGTGACCAC 59.829 55.000 0.00 0.00 39.19 4.16
4807 5267 4.814900 TTTTTGGCGCTGCGAAAA 57.185 44.444 28.07 20.34 42.52 2.29
4808 5268 2.292803 TTTTTGGCGCTGCGAAAAC 58.707 47.368 28.07 12.51 43.51 2.43
4809 5269 0.458543 TTTTTGGCGCTGCGAAAACA 60.459 45.000 28.07 14.79 43.51 2.83
4810 5270 0.869454 TTTTGGCGCTGCGAAAACAG 60.869 50.000 28.07 0.00 40.23 3.16
4811 5271 1.719725 TTTGGCGCTGCGAAAACAGA 61.720 50.000 28.07 10.54 40.25 3.41
4812 5272 1.719725 TTGGCGCTGCGAAAACAGAA 61.720 50.000 28.07 3.61 40.25 3.02
4813 5273 1.008995 GGCGCTGCGAAAACAGAAA 60.009 52.632 28.07 0.00 40.25 2.52
4814 5274 0.387239 GGCGCTGCGAAAACAGAAAT 60.387 50.000 28.07 0.00 40.25 2.17
4815 5275 0.977674 GCGCTGCGAAAACAGAAATC 59.022 50.000 28.07 0.00 40.25 2.17
4816 5276 1.400242 GCGCTGCGAAAACAGAAATCT 60.400 47.619 28.07 0.00 40.25 2.40
4832 5292 7.432350 CAGAAATCTGCAACTAAAGAACTCT 57.568 36.000 0.00 0.00 37.15 3.24
4833 5293 7.869800 CAGAAATCTGCAACTAAAGAACTCTT 58.130 34.615 0.00 0.00 37.15 2.85
4834 5294 8.348507 CAGAAATCTGCAACTAAAGAACTCTTT 58.651 33.333 9.53 9.53 41.73 2.52
4835 5295 8.907885 AGAAATCTGCAACTAAAGAACTCTTTT 58.092 29.630 9.85 0.00 43.07 2.27
4836 5296 9.521503 GAAATCTGCAACTAAAGAACTCTTTTT 57.478 29.630 9.85 0.00 43.07 1.94
4902 5363 3.153369 TGGAAAAAGATGTGCCTAGCA 57.847 42.857 0.00 0.00 35.60 3.49
4903 5364 3.495331 TGGAAAAAGATGTGCCTAGCAA 58.505 40.909 0.00 0.00 41.47 3.91
4904 5365 3.507233 TGGAAAAAGATGTGCCTAGCAAG 59.493 43.478 0.00 0.00 41.47 4.01
4905 5366 3.505836 GAAAAAGATGTGCCTAGCAAGC 58.494 45.455 0.00 0.00 41.47 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 0.785378 TTTAATCGTGTGCCGTGTCG 59.215 50.000 0.00 0.00 37.94 4.35
10 11 2.953640 TTTTAATCGTGTGCCGTGTC 57.046 45.000 0.00 0.00 37.94 3.67
11 12 2.031508 CCTTTTTAATCGTGTGCCGTGT 60.032 45.455 0.00 0.00 37.94 4.49
12 13 2.580589 CCTTTTTAATCGTGTGCCGTG 58.419 47.619 0.00 0.00 37.94 4.94
13 14 1.538075 CCCTTTTTAATCGTGTGCCGT 59.462 47.619 0.00 0.00 37.94 5.68
14 15 1.731098 GCCCTTTTTAATCGTGTGCCG 60.731 52.381 0.00 0.00 38.13 5.69
15 16 1.403647 GGCCCTTTTTAATCGTGTGCC 60.404 52.381 0.00 0.00 0.00 5.01
16 17 1.544246 AGGCCCTTTTTAATCGTGTGC 59.456 47.619 0.00 0.00 0.00 4.57
17 18 3.934457 AAGGCCCTTTTTAATCGTGTG 57.066 42.857 0.00 0.00 0.00 3.82
18 19 3.760151 GGTAAGGCCCTTTTTAATCGTGT 59.240 43.478 0.00 0.00 0.00 4.49
19 20 4.365899 GGTAAGGCCCTTTTTAATCGTG 57.634 45.455 0.00 0.00 0.00 4.35
34 35 2.186125 GTCGAAGGCCGGGTAAGG 59.814 66.667 2.18 0.00 39.14 2.69
43 44 2.999739 TTTCGTGGTGGGTCGAAGGC 63.000 60.000 0.00 0.00 44.62 4.35
44 45 1.070105 TTTCGTGGTGGGTCGAAGG 59.930 57.895 0.00 0.00 44.62 3.46
45 46 0.531090 TGTTTCGTGGTGGGTCGAAG 60.531 55.000 0.00 0.00 44.62 3.79
46 47 0.107800 TTGTTTCGTGGTGGGTCGAA 60.108 50.000 0.00 0.00 42.82 3.71
47 48 0.531090 CTTGTTTCGTGGTGGGTCGA 60.531 55.000 0.00 0.00 0.00 4.20
48 49 1.503818 CCTTGTTTCGTGGTGGGTCG 61.504 60.000 0.00 0.00 0.00 4.79
49 50 1.792118 GCCTTGTTTCGTGGTGGGTC 61.792 60.000 0.00 0.00 0.00 4.46
50 51 1.826487 GCCTTGTTTCGTGGTGGGT 60.826 57.895 0.00 0.00 0.00 4.51
51 52 2.561037 GGCCTTGTTTCGTGGTGGG 61.561 63.158 0.00 0.00 0.00 4.61
52 53 2.903547 CGGCCTTGTTTCGTGGTGG 61.904 63.158 0.00 0.00 0.00 4.61
53 54 1.234615 ATCGGCCTTGTTTCGTGGTG 61.235 55.000 0.00 0.00 0.00 4.17
54 55 0.953960 GATCGGCCTTGTTTCGTGGT 60.954 55.000 0.00 0.00 0.00 4.16
55 56 0.673644 AGATCGGCCTTGTTTCGTGG 60.674 55.000 0.00 0.00 0.00 4.94
56 57 0.721718 GAGATCGGCCTTGTTTCGTG 59.278 55.000 0.00 0.00 0.00 4.35
57 58 0.736325 CGAGATCGGCCTTGTTTCGT 60.736 55.000 0.00 0.00 35.37 3.85
58 59 0.457853 TCGAGATCGGCCTTGTTTCG 60.458 55.000 0.00 4.16 40.29 3.46
59 60 1.722011 TTCGAGATCGGCCTTGTTTC 58.278 50.000 0.00 0.00 40.29 2.78
60 61 2.076863 CTTTCGAGATCGGCCTTGTTT 58.923 47.619 0.00 0.00 40.29 2.83
61 62 1.726853 CTTTCGAGATCGGCCTTGTT 58.273 50.000 0.00 0.00 40.29 2.83
62 63 0.741221 GCTTTCGAGATCGGCCTTGT 60.741 55.000 0.00 0.00 40.29 3.16
63 64 1.756375 CGCTTTCGAGATCGGCCTTG 61.756 60.000 0.00 0.00 40.29 3.61
64 65 1.519455 CGCTTTCGAGATCGGCCTT 60.519 57.895 0.00 0.00 40.29 4.35
65 66 1.945354 TTCGCTTTCGAGATCGGCCT 61.945 55.000 0.00 0.00 46.34 5.19
66 67 1.483424 CTTCGCTTTCGAGATCGGCC 61.483 60.000 1.91 0.00 46.34 6.13
67 68 0.802607 ACTTCGCTTTCGAGATCGGC 60.803 55.000 1.91 0.00 46.34 5.54
68 69 1.192793 GACTTCGCTTTCGAGATCGG 58.807 55.000 1.91 0.00 46.34 4.18
69 70 2.181426 AGACTTCGCTTTCGAGATCG 57.819 50.000 0.00 0.00 46.34 3.69
70 71 5.517054 ACATTAAGACTTCGCTTTCGAGATC 59.483 40.000 0.00 0.00 46.34 2.75
71 72 5.411781 ACATTAAGACTTCGCTTTCGAGAT 58.588 37.500 0.00 0.00 46.34 2.75
72 73 4.806330 ACATTAAGACTTCGCTTTCGAGA 58.194 39.130 0.00 0.00 46.34 4.04
73 74 4.259056 CGACATTAAGACTTCGCTTTCGAG 60.259 45.833 0.00 0.00 46.34 4.04
74 75 3.606777 CGACATTAAGACTTCGCTTTCGA 59.393 43.478 0.00 0.00 43.89 3.71
75 76 3.364023 ACGACATTAAGACTTCGCTTTCG 59.636 43.478 0.00 0.00 34.81 3.46
76 77 4.488889 CGACGACATTAAGACTTCGCTTTC 60.489 45.833 0.00 0.00 34.81 2.62
77 78 3.364023 CGACGACATTAAGACTTCGCTTT 59.636 43.478 0.00 0.00 34.81 3.51
78 79 2.915463 CGACGACATTAAGACTTCGCTT 59.085 45.455 0.00 0.00 34.81 4.68
79 80 2.516923 CGACGACATTAAGACTTCGCT 58.483 47.619 0.00 0.00 34.81 4.93
80 81 1.582502 CCGACGACATTAAGACTTCGC 59.417 52.381 0.00 0.00 33.69 4.70
81 82 2.182825 CCCGACGACATTAAGACTTCG 58.817 52.381 0.00 0.00 34.51 3.79
82 83 1.925185 GCCCGACGACATTAAGACTTC 59.075 52.381 0.00 0.00 0.00 3.01
83 84 1.274167 TGCCCGACGACATTAAGACTT 59.726 47.619 0.00 0.00 0.00 3.01
84 85 0.892755 TGCCCGACGACATTAAGACT 59.107 50.000 0.00 0.00 0.00 3.24
85 86 1.593006 CATGCCCGACGACATTAAGAC 59.407 52.381 0.00 0.00 0.00 3.01
86 87 1.472552 CCATGCCCGACGACATTAAGA 60.473 52.381 0.00 0.00 0.00 2.10
87 88 0.937304 CCATGCCCGACGACATTAAG 59.063 55.000 0.00 0.00 0.00 1.85
88 89 1.092921 GCCATGCCCGACGACATTAA 61.093 55.000 0.00 0.00 0.00 1.40
89 90 1.522806 GCCATGCCCGACGACATTA 60.523 57.895 0.00 0.00 0.00 1.90
90 91 2.824041 GCCATGCCCGACGACATT 60.824 61.111 0.00 0.00 0.00 2.71
91 92 4.094646 TGCCATGCCCGACGACAT 62.095 61.111 0.00 0.00 0.00 3.06
99 100 4.740822 AAGGGACGTGCCATGCCC 62.741 66.667 28.90 14.39 41.00 5.36
100 101 1.815817 AAAAAGGGACGTGCCATGCC 61.816 55.000 28.90 4.29 38.95 4.40
101 102 1.665442 AAAAAGGGACGTGCCATGC 59.335 52.632 28.90 0.19 38.95 4.06
116 117 4.218635 TGTCATACCGGCTTGCAATAAAAA 59.781 37.500 0.00 0.00 0.00 1.94
117 118 3.759086 TGTCATACCGGCTTGCAATAAAA 59.241 39.130 0.00 0.00 0.00 1.52
118 119 3.127895 GTGTCATACCGGCTTGCAATAAA 59.872 43.478 0.00 0.00 0.00 1.40
119 120 2.680841 GTGTCATACCGGCTTGCAATAA 59.319 45.455 0.00 0.00 0.00 1.40
120 121 2.285083 GTGTCATACCGGCTTGCAATA 58.715 47.619 0.00 0.00 0.00 1.90
121 122 1.094785 GTGTCATACCGGCTTGCAAT 58.905 50.000 0.00 0.00 0.00 3.56
122 123 1.295357 CGTGTCATACCGGCTTGCAA 61.295 55.000 0.00 0.00 0.00 4.08
123 124 1.739929 CGTGTCATACCGGCTTGCA 60.740 57.895 0.00 0.00 0.00 4.08
124 125 2.461110 CCGTGTCATACCGGCTTGC 61.461 63.158 0.00 0.00 37.43 4.01
125 126 3.794270 CCGTGTCATACCGGCTTG 58.206 61.111 0.00 0.00 37.43 4.01
130 131 0.594028 CATCGGACCGTGTCATACCG 60.594 60.000 14.79 0.00 44.09 4.02
131 132 0.874607 GCATCGGACCGTGTCATACC 60.875 60.000 14.79 0.00 33.68 2.73
132 133 1.206745 CGCATCGGACCGTGTCATAC 61.207 60.000 14.79 0.00 33.68 2.39
133 134 1.065109 CGCATCGGACCGTGTCATA 59.935 57.895 14.79 0.00 33.68 2.15
134 135 2.202743 CGCATCGGACCGTGTCAT 60.203 61.111 14.79 0.00 33.68 3.06
150 151 1.730451 AAAAAGTGTTGGACGGGCCG 61.730 55.000 27.06 27.06 40.66 6.13
151 152 2.120765 AAAAAGTGTTGGACGGGCC 58.879 52.632 0.00 0.00 37.10 5.80
256 257 9.660180 GAGAAGATGTAGAACAAACCTAAGATT 57.340 33.333 0.00 0.00 0.00 2.40
257 258 9.041354 AGAGAAGATGTAGAACAAACCTAAGAT 57.959 33.333 0.00 0.00 0.00 2.40
258 259 8.423906 AGAGAAGATGTAGAACAAACCTAAGA 57.576 34.615 0.00 0.00 0.00 2.10
321 322 8.937884 GCCTTTTGTTCCTTTTGTTTTAAAGTA 58.062 29.630 0.00 0.00 34.11 2.24
322 323 7.663905 AGCCTTTTGTTCCTTTTGTTTTAAAGT 59.336 29.630 0.00 0.00 34.11 2.66
323 324 7.962373 CAGCCTTTTGTTCCTTTTGTTTTAAAG 59.038 33.333 0.00 0.00 35.39 1.85
324 325 7.661847 TCAGCCTTTTGTTCCTTTTGTTTTAAA 59.338 29.630 0.00 0.00 0.00 1.52
325 326 7.162082 TCAGCCTTTTGTTCCTTTTGTTTTAA 58.838 30.769 0.00 0.00 0.00 1.52
326 327 6.702329 TCAGCCTTTTGTTCCTTTTGTTTTA 58.298 32.000 0.00 0.00 0.00 1.52
327 328 5.555966 TCAGCCTTTTGTTCCTTTTGTTTT 58.444 33.333 0.00 0.00 0.00 2.43
328 329 5.159273 TCAGCCTTTTGTTCCTTTTGTTT 57.841 34.783 0.00 0.00 0.00 2.83
329 330 4.817318 TCAGCCTTTTGTTCCTTTTGTT 57.183 36.364 0.00 0.00 0.00 2.83
330 331 4.817318 TTCAGCCTTTTGTTCCTTTTGT 57.183 36.364 0.00 0.00 0.00 2.83
331 332 5.643348 ACTTTTCAGCCTTTTGTTCCTTTTG 59.357 36.000 0.00 0.00 0.00 2.44
332 333 5.804639 ACTTTTCAGCCTTTTGTTCCTTTT 58.195 33.333 0.00 0.00 0.00 2.27
333 334 5.420725 ACTTTTCAGCCTTTTGTTCCTTT 57.579 34.783 0.00 0.00 0.00 3.11
334 335 6.071051 TGTTACTTTTCAGCCTTTTGTTCCTT 60.071 34.615 0.00 0.00 0.00 3.36
335 336 5.420739 TGTTACTTTTCAGCCTTTTGTTCCT 59.579 36.000 0.00 0.00 0.00 3.36
336 337 5.518847 GTGTTACTTTTCAGCCTTTTGTTCC 59.481 40.000 0.00 0.00 0.00 3.62
337 338 5.229260 CGTGTTACTTTTCAGCCTTTTGTTC 59.771 40.000 0.00 0.00 0.00 3.18
338 339 5.099575 CGTGTTACTTTTCAGCCTTTTGTT 58.900 37.500 0.00 0.00 0.00 2.83
339 340 4.439563 CCGTGTTACTTTTCAGCCTTTTGT 60.440 41.667 0.00 0.00 0.00 2.83
340 341 4.041723 CCGTGTTACTTTTCAGCCTTTTG 58.958 43.478 0.00 0.00 0.00 2.44
341 342 3.067601 CCCGTGTTACTTTTCAGCCTTTT 59.932 43.478 0.00 0.00 0.00 2.27
342 343 2.621526 CCCGTGTTACTTTTCAGCCTTT 59.378 45.455 0.00 0.00 0.00 3.11
343 344 2.227194 CCCGTGTTACTTTTCAGCCTT 58.773 47.619 0.00 0.00 0.00 4.35
344 345 1.892209 CCCGTGTTACTTTTCAGCCT 58.108 50.000 0.00 0.00 0.00 4.58
345 346 0.240145 GCCCGTGTTACTTTTCAGCC 59.760 55.000 0.00 0.00 0.00 4.85
346 347 0.240145 GGCCCGTGTTACTTTTCAGC 59.760 55.000 0.00 0.00 0.00 4.26
347 348 1.600023 TGGCCCGTGTTACTTTTCAG 58.400 50.000 0.00 0.00 0.00 3.02
348 349 1.677052 GTTGGCCCGTGTTACTTTTCA 59.323 47.619 0.00 0.00 0.00 2.69
349 350 1.001048 GGTTGGCCCGTGTTACTTTTC 60.001 52.381 0.00 0.00 0.00 2.29
350 351 1.034356 GGTTGGCCCGTGTTACTTTT 58.966 50.000 0.00 0.00 0.00 2.27
351 352 0.824595 GGGTTGGCCCGTGTTACTTT 60.825 55.000 0.00 0.00 46.51 2.66
352 353 1.228337 GGGTTGGCCCGTGTTACTT 60.228 57.895 0.00 0.00 46.51 2.24
353 354 2.433004 GGGTTGGCCCGTGTTACT 59.567 61.111 0.00 0.00 46.51 2.24
388 389 1.452953 GGCAGTTATAAAGGCCGGCC 61.453 60.000 39.29 39.29 36.58 6.13
389 390 2.030551 GGCAGTTATAAAGGCCGGC 58.969 57.895 21.18 21.18 36.58 6.13
392 393 2.035066 CAGCATGGCAGTTATAAAGGCC 59.965 50.000 17.60 17.60 46.58 5.19
393 394 3.360249 CAGCATGGCAGTTATAAAGGC 57.640 47.619 0.00 5.96 0.00 4.35
414 415 4.875713 ACGGCATGGGAATCGGCC 62.876 66.667 0.00 0.00 42.98 6.13
415 416 3.585990 CACGGCATGGGAATCGGC 61.586 66.667 0.00 0.00 0.00 5.54
416 417 3.585990 GCACGGCATGGGAATCGG 61.586 66.667 0.00 0.00 0.00 4.18
417 418 3.585990 GGCACGGCATGGGAATCG 61.586 66.667 0.00 0.00 0.00 3.34
418 419 3.219198 GGGCACGGCATGGGAATC 61.219 66.667 0.00 0.00 0.00 2.52
429 430 3.436924 GTAAAAGGGCCGGGCACG 61.437 66.667 30.95 0.00 36.86 5.34
430 431 2.282603 TGTAAAAGGGCCGGGCAC 60.283 61.111 30.95 19.08 0.00 5.01
431 432 2.034999 CTGTAAAAGGGCCGGGCA 59.965 61.111 30.95 5.44 0.00 5.36
432 433 3.449227 GCTGTAAAAGGGCCGGGC 61.449 66.667 22.00 22.00 0.00 6.13
433 434 2.754254 GGCTGTAAAAGGGCCGGG 60.754 66.667 2.18 0.00 36.37 5.73
436 437 2.351244 GCCTGGCTGTAAAAGGGCC 61.351 63.158 12.43 0.00 45.45 5.80
437 438 3.288484 GCCTGGCTGTAAAAGGGC 58.712 61.111 12.43 0.00 0.00 5.19
438 439 0.967380 CTGGCCTGGCTGTAAAAGGG 60.967 60.000 19.68 0.00 0.00 3.95
439 440 1.598701 GCTGGCCTGGCTGTAAAAGG 61.599 60.000 19.68 1.62 0.00 3.11
440 441 1.598701 GGCTGGCCTGGCTGTAAAAG 61.599 60.000 26.34 7.95 0.00 2.27
441 442 1.606313 GGCTGGCCTGGCTGTAAAA 60.606 57.895 26.34 0.00 0.00 1.52
442 443 2.035626 GGCTGGCCTGGCTGTAAA 59.964 61.111 26.34 0.00 0.00 2.01
443 444 4.047125 GGGCTGGCCTGGCTGTAA 62.047 66.667 30.74 1.24 36.10 2.41
458 459 0.831288 TGAAAACCTGGCCACATGGG 60.831 55.000 13.74 10.61 40.85 4.00
459 460 1.205417 GATGAAAACCTGGCCACATGG 59.795 52.381 0.00 4.17 38.53 3.66
460 461 1.205417 GGATGAAAACCTGGCCACATG 59.795 52.381 0.00 0.00 0.00 3.21
461 462 1.560505 GGATGAAAACCTGGCCACAT 58.439 50.000 0.00 1.75 0.00 3.21
462 463 0.541764 GGGATGAAAACCTGGCCACA 60.542 55.000 0.00 0.00 0.00 4.17
463 464 1.257750 GGGGATGAAAACCTGGCCAC 61.258 60.000 0.00 0.00 0.00 5.01
464 465 1.078347 GGGGATGAAAACCTGGCCA 59.922 57.895 4.71 4.71 0.00 5.36
465 466 1.078347 TGGGGATGAAAACCTGGCC 59.922 57.895 0.00 0.00 0.00 5.36
466 467 1.257750 GGTGGGGATGAAAACCTGGC 61.258 60.000 0.00 0.00 0.00 4.85
467 468 0.409484 AGGTGGGGATGAAAACCTGG 59.591 55.000 0.00 0.00 41.52 4.45
468 469 3.449746 TTAGGTGGGGATGAAAACCTG 57.550 47.619 3.48 0.00 42.96 4.00
469 470 4.479156 TTTTAGGTGGGGATGAAAACCT 57.521 40.909 0.00 0.00 45.06 3.50
491 492 8.606830 ACCTGTATGAGGAGAAGAATAGTTTTT 58.393 33.333 0.00 0.00 46.33 1.94
492 493 8.043710 CACCTGTATGAGGAGAAGAATAGTTTT 58.956 37.037 0.00 0.00 46.33 2.43
493 494 7.365117 CCACCTGTATGAGGAGAAGAATAGTTT 60.365 40.741 0.00 0.00 46.33 2.66
494 495 6.098982 CCACCTGTATGAGGAGAAGAATAGTT 59.901 42.308 0.00 0.00 46.33 2.24
495 496 5.600484 CCACCTGTATGAGGAGAAGAATAGT 59.400 44.000 0.00 0.00 46.33 2.12
496 497 5.510520 GCCACCTGTATGAGGAGAAGAATAG 60.511 48.000 0.00 0.00 46.33 1.73
497 498 4.345257 GCCACCTGTATGAGGAGAAGAATA 59.655 45.833 0.00 0.00 46.33 1.75
498 499 3.135530 GCCACCTGTATGAGGAGAAGAAT 59.864 47.826 0.00 0.00 46.33 2.40
499 500 2.501723 GCCACCTGTATGAGGAGAAGAA 59.498 50.000 0.00 0.00 46.33 2.52
500 501 2.111384 GCCACCTGTATGAGGAGAAGA 58.889 52.381 0.00 0.00 46.33 2.87
501 502 1.139853 GGCCACCTGTATGAGGAGAAG 59.860 57.143 0.00 0.00 46.33 2.85
502 503 1.204146 GGCCACCTGTATGAGGAGAA 58.796 55.000 0.00 0.00 46.33 2.87
503 504 0.339859 AGGCCACCTGTATGAGGAGA 59.660 55.000 5.01 0.00 46.33 3.71
504 505 0.755686 GAGGCCACCTGTATGAGGAG 59.244 60.000 5.01 0.00 46.33 3.69
505 506 0.042581 TGAGGCCACCTGTATGAGGA 59.957 55.000 5.01 0.00 46.33 3.71
507 508 4.321718 CAATATGAGGCCACCTGTATGAG 58.678 47.826 5.01 0.00 31.76 2.90
508 509 3.496692 GCAATATGAGGCCACCTGTATGA 60.497 47.826 5.01 0.00 31.76 2.15
509 510 2.816087 GCAATATGAGGCCACCTGTATG 59.184 50.000 5.01 0.00 31.76 2.39
510 511 2.713167 AGCAATATGAGGCCACCTGTAT 59.287 45.455 5.01 0.00 31.76 2.29
511 512 2.104792 GAGCAATATGAGGCCACCTGTA 59.895 50.000 5.01 0.00 31.76 2.74
512 513 0.921896 AGCAATATGAGGCCACCTGT 59.078 50.000 5.01 0.00 31.76 4.00
513 514 1.134007 TGAGCAATATGAGGCCACCTG 60.134 52.381 5.01 0.00 31.76 4.00
514 515 1.142465 CTGAGCAATATGAGGCCACCT 59.858 52.381 5.01 0.00 36.03 4.00
515 516 1.133976 ACTGAGCAATATGAGGCCACC 60.134 52.381 5.01 0.00 0.00 4.61
516 517 1.945394 CACTGAGCAATATGAGGCCAC 59.055 52.381 5.01 0.00 0.00 5.01
517 518 1.134007 CCACTGAGCAATATGAGGCCA 60.134 52.381 5.01 0.00 0.00 5.36
518 519 1.133976 ACCACTGAGCAATATGAGGCC 60.134 52.381 0.00 0.00 0.00 5.19
519 520 1.945394 CACCACTGAGCAATATGAGGC 59.055 52.381 0.00 0.00 0.00 4.70
520 521 3.548745 TCACCACTGAGCAATATGAGG 57.451 47.619 0.00 0.00 0.00 3.86
521 522 4.993584 GGTATCACCACTGAGCAATATGAG 59.006 45.833 0.00 0.00 38.42 2.90
522 523 4.655649 AGGTATCACCACTGAGCAATATGA 59.344 41.667 0.00 0.00 41.95 2.15
523 524 4.965814 AGGTATCACCACTGAGCAATATG 58.034 43.478 0.00 0.00 41.95 1.78
524 525 6.077993 TCTAGGTATCACCACTGAGCAATAT 58.922 40.000 0.00 0.00 41.95 1.28
525 526 5.454966 TCTAGGTATCACCACTGAGCAATA 58.545 41.667 0.00 0.00 41.95 1.90
526 527 4.290093 TCTAGGTATCACCACTGAGCAAT 58.710 43.478 0.00 0.00 41.95 3.56
527 528 3.708451 TCTAGGTATCACCACTGAGCAA 58.292 45.455 0.00 0.00 41.95 3.91
528 529 3.382083 TCTAGGTATCACCACTGAGCA 57.618 47.619 0.00 0.00 41.95 4.26
529 530 3.891977 TCATCTAGGTATCACCACTGAGC 59.108 47.826 0.00 0.00 41.95 4.26
530 531 7.613411 TGATATCATCTAGGTATCACCACTGAG 59.387 40.741 0.00 0.00 41.95 3.35
531 532 7.470192 TGATATCATCTAGGTATCACCACTGA 58.530 38.462 0.00 0.00 41.95 3.41
532 533 7.709149 TGATATCATCTAGGTATCACCACTG 57.291 40.000 0.00 0.00 41.95 3.66
533 534 8.173412 TCTTGATATCATCTAGGTATCACCACT 58.827 37.037 6.17 0.00 41.95 4.00
534 535 8.354711 TCTTGATATCATCTAGGTATCACCAC 57.645 38.462 6.17 0.00 41.95 4.16
535 536 7.617329 CCTCTTGATATCATCTAGGTATCACCA 59.383 40.741 6.17 0.00 41.95 4.17
536 537 7.836685 TCCTCTTGATATCATCTAGGTATCACC 59.163 40.741 19.95 0.00 35.29 4.02
537 538 8.815565 TCCTCTTGATATCATCTAGGTATCAC 57.184 38.462 19.95 0.00 35.29 3.06
538 539 8.840751 TCTCCTCTTGATATCATCTAGGTATCA 58.159 37.037 19.95 0.00 34.12 2.15
539 540 9.693739 TTCTCCTCTTGATATCATCTAGGTATC 57.306 37.037 19.95 0.00 33.76 2.24
540 541 9.474313 GTTCTCCTCTTGATATCATCTAGGTAT 57.526 37.037 19.95 0.00 33.76 2.73
541 542 7.891183 GGTTCTCCTCTTGATATCATCTAGGTA 59.109 40.741 19.95 11.82 33.76 3.08
542 543 6.723977 GGTTCTCCTCTTGATATCATCTAGGT 59.276 42.308 19.95 0.00 33.76 3.08
543 544 6.127758 CGGTTCTCCTCTTGATATCATCTAGG 60.128 46.154 16.83 16.83 33.76 3.02
544 545 6.127758 CCGGTTCTCCTCTTGATATCATCTAG 60.128 46.154 6.17 1.20 34.16 2.43
545 546 5.712446 CCGGTTCTCCTCTTGATATCATCTA 59.288 44.000 6.17 0.00 0.00 1.98
546 547 4.526262 CCGGTTCTCCTCTTGATATCATCT 59.474 45.833 6.17 0.00 0.00 2.90
547 548 4.322349 CCCGGTTCTCCTCTTGATATCATC 60.322 50.000 6.17 0.00 0.00 2.92
548 549 3.580458 CCCGGTTCTCCTCTTGATATCAT 59.420 47.826 6.17 0.00 0.00 2.45
549 550 2.965831 CCCGGTTCTCCTCTTGATATCA 59.034 50.000 0.00 0.00 0.00 2.15
550 551 2.300437 CCCCGGTTCTCCTCTTGATATC 59.700 54.545 0.00 0.00 0.00 1.63
551 552 2.330216 CCCCGGTTCTCCTCTTGATAT 58.670 52.381 0.00 0.00 0.00 1.63
552 553 1.789523 CCCCGGTTCTCCTCTTGATA 58.210 55.000 0.00 0.00 0.00 2.15
553 554 1.627297 GCCCCGGTTCTCCTCTTGAT 61.627 60.000 0.00 0.00 0.00 2.57
554 555 2.291043 GCCCCGGTTCTCCTCTTGA 61.291 63.158 0.00 0.00 0.00 3.02
555 556 2.269241 GCCCCGGTTCTCCTCTTG 59.731 66.667 0.00 0.00 0.00 3.02
556 557 2.203938 TGCCCCGGTTCTCCTCTT 60.204 61.111 0.00 0.00 0.00 2.85
557 558 2.685380 CTGCCCCGGTTCTCCTCT 60.685 66.667 0.00 0.00 0.00 3.69
558 559 3.787001 CCTGCCCCGGTTCTCCTC 61.787 72.222 0.00 0.00 0.00 3.71
559 560 2.758852 TAACCTGCCCCGGTTCTCCT 62.759 60.000 0.00 0.00 43.63 3.69
560 561 1.632965 ATAACCTGCCCCGGTTCTCC 61.633 60.000 0.00 0.00 43.63 3.71
561 562 0.463833 CATAACCTGCCCCGGTTCTC 60.464 60.000 0.00 0.00 43.63 2.87
562 563 1.607612 CATAACCTGCCCCGGTTCT 59.392 57.895 0.00 0.00 43.63 3.01
563 564 1.453197 CCATAACCTGCCCCGGTTC 60.453 63.158 0.00 0.00 43.63 3.62
565 566 3.416880 CCCATAACCTGCCCCGGT 61.417 66.667 0.00 0.00 39.48 5.28
566 567 4.204028 CCCCATAACCTGCCCCGG 62.204 72.222 0.00 0.00 0.00 5.73
567 568 4.894896 GCCCCATAACCTGCCCCG 62.895 72.222 0.00 0.00 0.00 5.73
568 569 1.435346 ATAGCCCCATAACCTGCCCC 61.435 60.000 0.00 0.00 0.00 5.80
569 570 0.038310 GATAGCCCCATAACCTGCCC 59.962 60.000 0.00 0.00 0.00 5.36
570 571 0.771127 TGATAGCCCCATAACCTGCC 59.229 55.000 0.00 0.00 0.00 4.85
571 572 2.887151 ATGATAGCCCCATAACCTGC 57.113 50.000 0.00 0.00 0.00 4.85
572 573 4.908601 TGTATGATAGCCCCATAACCTG 57.091 45.455 0.00 0.00 0.00 4.00
573 574 5.100811 TCATGTATGATAGCCCCATAACCT 58.899 41.667 0.00 0.00 0.00 3.50
574 575 5.435686 TCATGTATGATAGCCCCATAACC 57.564 43.478 0.00 0.00 0.00 2.85
575 576 7.944729 ATTTCATGTATGATAGCCCCATAAC 57.055 36.000 0.00 0.00 36.56 1.89
576 577 8.393259 AGAATTTCATGTATGATAGCCCCATAA 58.607 33.333 0.00 0.00 36.56 1.90
577 578 7.932134 AGAATTTCATGTATGATAGCCCCATA 58.068 34.615 0.00 0.00 36.56 2.74
578 579 6.797707 AGAATTTCATGTATGATAGCCCCAT 58.202 36.000 0.00 0.00 36.56 4.00
579 580 6.204852 AGAATTTCATGTATGATAGCCCCA 57.795 37.500 0.00 0.00 36.56 4.96
580 581 7.624549 TCTAGAATTTCATGTATGATAGCCCC 58.375 38.462 0.00 0.00 36.56 5.80
581 582 7.279758 GCTCTAGAATTTCATGTATGATAGCCC 59.720 40.741 0.00 0.00 36.56 5.19
582 583 7.821359 TGCTCTAGAATTTCATGTATGATAGCC 59.179 37.037 0.00 0.00 36.56 3.93
583 584 8.655092 GTGCTCTAGAATTTCATGTATGATAGC 58.345 37.037 0.00 0.00 36.56 2.97
584 585 9.926158 AGTGCTCTAGAATTTCATGTATGATAG 57.074 33.333 0.00 0.00 36.56 2.08
586 587 9.624373 AAAGTGCTCTAGAATTTCATGTATGAT 57.376 29.630 0.00 0.00 36.56 2.45
591 592 9.593134 CTAGTAAAGTGCTCTAGAATTTCATGT 57.407 33.333 0.00 0.00 34.77 3.21
592 593 9.593134 ACTAGTAAAGTGCTCTAGAATTTCATG 57.407 33.333 0.00 0.00 36.93 3.07
594 595 9.998106 AAACTAGTAAAGTGCTCTAGAATTTCA 57.002 29.630 0.00 0.00 38.88 2.69
601 602 9.011407 CGATGTAAAACTAGTAAAGTGCTCTAG 57.989 37.037 0.00 0.00 38.88 2.43
602 603 8.517878 ACGATGTAAAACTAGTAAAGTGCTCTA 58.482 33.333 0.00 0.00 38.88 2.43
603 604 7.328737 CACGATGTAAAACTAGTAAAGTGCTCT 59.671 37.037 0.00 0.00 38.88 4.09
604 605 7.115947 ACACGATGTAAAACTAGTAAAGTGCTC 59.884 37.037 0.00 0.00 38.88 4.26
605 606 6.927381 ACACGATGTAAAACTAGTAAAGTGCT 59.073 34.615 0.00 0.00 38.88 4.40
606 607 7.113704 ACACGATGTAAAACTAGTAAAGTGC 57.886 36.000 0.00 0.00 38.88 4.40
643 644 8.968242 GCTTCGACATTTCAAGTTCTTAAATTT 58.032 29.630 0.00 0.00 0.00 1.82
644 645 8.352942 AGCTTCGACATTTCAAGTTCTTAAATT 58.647 29.630 0.00 0.00 0.00 1.82
645 646 7.875971 AGCTTCGACATTTCAAGTTCTTAAAT 58.124 30.769 0.00 0.00 0.00 1.40
646 647 7.011950 TGAGCTTCGACATTTCAAGTTCTTAAA 59.988 33.333 0.00 0.00 30.87 1.52
647 648 6.481976 TGAGCTTCGACATTTCAAGTTCTTAA 59.518 34.615 0.00 0.00 30.87 1.85
648 649 5.989168 TGAGCTTCGACATTTCAAGTTCTTA 59.011 36.000 0.00 0.00 30.87 2.10
649 650 4.816385 TGAGCTTCGACATTTCAAGTTCTT 59.184 37.500 0.00 0.00 30.87 2.52
650 651 4.212214 GTGAGCTTCGACATTTCAAGTTCT 59.788 41.667 0.00 0.00 30.87 3.01
651 652 4.024893 TGTGAGCTTCGACATTTCAAGTTC 60.025 41.667 0.00 0.00 0.00 3.01
652 653 3.876914 TGTGAGCTTCGACATTTCAAGTT 59.123 39.130 0.00 0.00 0.00 2.66
653 654 3.466836 TGTGAGCTTCGACATTTCAAGT 58.533 40.909 0.00 0.00 0.00 3.16
654 655 4.472691 TTGTGAGCTTCGACATTTCAAG 57.527 40.909 0.00 0.00 0.00 3.02
655 656 4.756642 AGATTGTGAGCTTCGACATTTCAA 59.243 37.500 0.00 0.00 0.00 2.69
656 657 4.318332 AGATTGTGAGCTTCGACATTTCA 58.682 39.130 0.00 0.00 0.00 2.69
657 658 4.935885 AGATTGTGAGCTTCGACATTTC 57.064 40.909 0.00 0.00 0.00 2.17
658 659 4.331168 GCTAGATTGTGAGCTTCGACATTT 59.669 41.667 0.00 0.00 35.73 2.32
659 660 3.868077 GCTAGATTGTGAGCTTCGACATT 59.132 43.478 0.00 0.00 35.73 2.71
660 661 3.118992 TGCTAGATTGTGAGCTTCGACAT 60.119 43.478 0.00 0.00 39.54 3.06
661 662 2.231235 TGCTAGATTGTGAGCTTCGACA 59.769 45.455 0.00 0.00 39.54 4.35
662 663 2.881074 TGCTAGATTGTGAGCTTCGAC 58.119 47.619 0.00 0.00 39.54 4.20
663 664 3.592898 TTGCTAGATTGTGAGCTTCGA 57.407 42.857 0.00 0.00 39.54 3.71
664 665 3.484886 GCTTTGCTAGATTGTGAGCTTCG 60.485 47.826 0.00 0.00 39.54 3.79
665 666 3.438087 TGCTTTGCTAGATTGTGAGCTTC 59.562 43.478 0.00 0.00 39.54 3.86
666 667 3.415212 TGCTTTGCTAGATTGTGAGCTT 58.585 40.909 0.00 0.00 39.54 3.74
667 668 3.063510 TGCTTTGCTAGATTGTGAGCT 57.936 42.857 0.00 0.00 39.54 4.09
668 669 4.367386 AATGCTTTGCTAGATTGTGAGC 57.633 40.909 0.00 0.00 39.25 4.26
669 670 7.081526 AGTTAATGCTTTGCTAGATTGTGAG 57.918 36.000 0.00 0.00 0.00 3.51
670 671 8.560355 TTAGTTAATGCTTTGCTAGATTGTGA 57.440 30.769 0.00 0.00 0.00 3.58
671 672 9.624697 TTTTAGTTAATGCTTTGCTAGATTGTG 57.375 29.630 0.00 0.00 0.00 3.33
672 673 9.626045 GTTTTAGTTAATGCTTTGCTAGATTGT 57.374 29.630 0.00 0.00 0.00 2.71
673 674 9.846248 AGTTTTAGTTAATGCTTTGCTAGATTG 57.154 29.630 0.00 0.00 0.00 2.67
677 678 9.774742 CCTTAGTTTTAGTTAATGCTTTGCTAG 57.225 33.333 0.00 0.00 0.00 3.42
678 679 8.241367 GCCTTAGTTTTAGTTAATGCTTTGCTA 58.759 33.333 0.00 0.00 0.00 3.49
679 680 7.039714 AGCCTTAGTTTTAGTTAATGCTTTGCT 60.040 33.333 0.00 0.00 30.03 3.91
680 681 7.090808 AGCCTTAGTTTTAGTTAATGCTTTGC 58.909 34.615 0.00 0.00 30.03 3.68
681 682 8.915654 CAAGCCTTAGTTTTAGTTAATGCTTTG 58.084 33.333 0.00 0.00 38.10 2.77
682 683 8.088365 CCAAGCCTTAGTTTTAGTTAATGCTTT 58.912 33.333 0.00 0.00 38.10 3.51
683 684 7.232737 ACCAAGCCTTAGTTTTAGTTAATGCTT 59.767 33.333 0.00 0.00 39.60 3.91
684 685 6.719829 ACCAAGCCTTAGTTTTAGTTAATGCT 59.280 34.615 0.00 0.00 33.88 3.79
685 686 6.920817 ACCAAGCCTTAGTTTTAGTTAATGC 58.079 36.000 0.00 0.00 0.00 3.56
686 687 7.241376 CGACCAAGCCTTAGTTTTAGTTAATG 58.759 38.462 0.00 0.00 0.00 1.90
687 688 6.128090 GCGACCAAGCCTTAGTTTTAGTTAAT 60.128 38.462 0.00 0.00 0.00 1.40
688 689 5.179929 GCGACCAAGCCTTAGTTTTAGTTAA 59.820 40.000 0.00 0.00 0.00 2.01
689 690 4.692155 GCGACCAAGCCTTAGTTTTAGTTA 59.308 41.667 0.00 0.00 0.00 2.24
690 691 3.501062 GCGACCAAGCCTTAGTTTTAGTT 59.499 43.478 0.00 0.00 0.00 2.24
691 692 3.072211 GCGACCAAGCCTTAGTTTTAGT 58.928 45.455 0.00 0.00 0.00 2.24
692 693 3.741805 GCGACCAAGCCTTAGTTTTAG 57.258 47.619 0.00 0.00 0.00 1.85
703 704 1.080569 CCAAACATGGCGACCAAGC 60.081 57.895 0.00 0.00 36.95 4.01
704 705 0.673437 AACCAAACATGGCGACCAAG 59.327 50.000 0.00 1.53 36.95 3.61
705 706 0.387202 CAACCAAACATGGCGACCAA 59.613 50.000 0.00 0.00 36.95 3.67
706 707 1.459455 CCAACCAAACATGGCGACCA 61.459 55.000 0.00 1.01 38.19 4.02
707 708 1.288752 CCAACCAAACATGGCGACC 59.711 57.895 0.00 0.00 0.00 4.79
708 709 1.288752 CCCAACCAAACATGGCGAC 59.711 57.895 0.00 0.00 35.28 5.19
709 710 1.152652 ACCCAACCAAACATGGCGA 60.153 52.632 0.00 0.00 35.28 5.54
710 711 1.288752 GACCCAACCAAACATGGCG 59.711 57.895 0.00 0.00 35.28 5.69
711 712 0.033366 GTGACCCAACCAAACATGGC 59.967 55.000 0.00 0.00 35.28 4.40
712 713 0.678950 GGTGACCCAACCAAACATGG 59.321 55.000 0.00 0.00 40.22 3.66
726 727 3.282885 GAAATGAAGATCCAGGGGTGAC 58.717 50.000 0.00 0.00 0.00 3.67
727 728 2.092968 CGAAATGAAGATCCAGGGGTGA 60.093 50.000 0.00 0.00 0.00 4.02
728 729 2.292267 CGAAATGAAGATCCAGGGGTG 58.708 52.381 0.00 0.00 0.00 4.61
729 730 1.916181 ACGAAATGAAGATCCAGGGGT 59.084 47.619 0.00 0.00 0.00 4.95
730 731 2.565841 GACGAAATGAAGATCCAGGGG 58.434 52.381 0.00 0.00 0.00 4.79
731 732 2.565841 GGACGAAATGAAGATCCAGGG 58.434 52.381 0.00 0.00 0.00 4.45
732 733 2.205074 CGGACGAAATGAAGATCCAGG 58.795 52.381 0.00 0.00 0.00 4.45
733 734 2.604914 CACGGACGAAATGAAGATCCAG 59.395 50.000 0.00 0.00 0.00 3.86
734 735 2.028476 ACACGGACGAAATGAAGATCCA 60.028 45.455 0.00 0.00 0.00 3.41
735 736 2.618053 ACACGGACGAAATGAAGATCC 58.382 47.619 0.00 0.00 0.00 3.36
736 737 5.773239 TTTACACGGACGAAATGAAGATC 57.227 39.130 0.00 0.00 0.00 2.75
737 738 6.737254 AATTTACACGGACGAAATGAAGAT 57.263 33.333 0.00 0.00 0.00 2.40
738 739 7.332430 ACATAATTTACACGGACGAAATGAAGA 59.668 33.333 0.00 0.00 0.00 2.87
739 740 7.425309 CACATAATTTACACGGACGAAATGAAG 59.575 37.037 0.00 0.00 0.00 3.02
740 741 7.117956 TCACATAATTTACACGGACGAAATGAA 59.882 33.333 0.00 0.00 0.00 2.57
741 742 6.590677 TCACATAATTTACACGGACGAAATGA 59.409 34.615 0.00 0.00 0.00 2.57
742 743 6.681178 GTCACATAATTTACACGGACGAAATG 59.319 38.462 0.00 0.00 0.00 2.32
743 744 6.454583 CGTCACATAATTTACACGGACGAAAT 60.455 38.462 0.00 0.00 46.89 2.17
744 745 5.164070 CGTCACATAATTTACACGGACGAAA 60.164 40.000 0.00 0.00 46.89 3.46
745 746 4.324135 CGTCACATAATTTACACGGACGAA 59.676 41.667 0.00 0.00 46.89 3.85
746 747 3.853103 CGTCACATAATTTACACGGACGA 59.147 43.478 0.00 0.00 46.89 4.20
747 748 4.159503 CGTCACATAATTTACACGGACG 57.840 45.455 0.00 0.00 40.45 4.79
750 751 4.806775 TGATCCGTCACATAATTTACACGG 59.193 41.667 1.85 1.85 46.56 4.94
751 752 5.959652 TGATCCGTCACATAATTTACACG 57.040 39.130 0.00 0.00 0.00 4.49
756 757 9.173021 TCACTTTATTGATCCGTCACATAATTT 57.827 29.630 0.00 0.00 33.11 1.82
757 758 8.731275 TCACTTTATTGATCCGTCACATAATT 57.269 30.769 0.00 0.00 33.11 1.40
758 759 8.908786 ATCACTTTATTGATCCGTCACATAAT 57.091 30.769 0.00 0.00 29.74 1.28
759 760 8.611757 CAATCACTTTATTGATCCGTCACATAA 58.388 33.333 0.00 0.00 38.84 1.90
760 761 7.768582 ACAATCACTTTATTGATCCGTCACATA 59.231 33.333 3.73 0.00 38.84 2.29
761 762 6.599244 ACAATCACTTTATTGATCCGTCACAT 59.401 34.615 3.73 0.00 38.84 3.21
762 763 5.937540 ACAATCACTTTATTGATCCGTCACA 59.062 36.000 3.73 0.00 38.84 3.58
763 764 6.313905 AGACAATCACTTTATTGATCCGTCAC 59.686 38.462 13.71 0.00 39.04 3.67
764 765 6.406370 AGACAATCACTTTATTGATCCGTCA 58.594 36.000 13.71 0.00 39.04 4.35
765 766 6.910536 AGACAATCACTTTATTGATCCGTC 57.089 37.500 3.73 7.21 38.84 4.79
766 767 8.786826 TTTAGACAATCACTTTATTGATCCGT 57.213 30.769 3.73 0.00 38.84 4.69
824 825 1.890489 GGTGCGGGGAATAGTGTTTTT 59.110 47.619 0.00 0.00 0.00 1.94
825 826 1.541379 GGTGCGGGGAATAGTGTTTT 58.459 50.000 0.00 0.00 0.00 2.43
826 827 0.323087 GGGTGCGGGGAATAGTGTTT 60.323 55.000 0.00 0.00 0.00 2.83
827 828 1.301954 GGGTGCGGGGAATAGTGTT 59.698 57.895 0.00 0.00 0.00 3.32
828 829 1.921346 TGGGTGCGGGGAATAGTGT 60.921 57.895 0.00 0.00 0.00 3.55
829 830 1.451387 GTGGGTGCGGGGAATAGTG 60.451 63.158 0.00 0.00 0.00 2.74
833 834 2.355115 GAAGTGGGTGCGGGGAAT 59.645 61.111 0.00 0.00 0.00 3.01
966 979 4.168291 GCAAGGGAGCCTCGGAGG 62.168 72.222 19.95 19.95 38.80 4.30
974 987 1.078143 AGATTCGTGGCAAGGGAGC 60.078 57.895 0.00 0.00 0.00 4.70
975 988 0.807667 CGAGATTCGTGGCAAGGGAG 60.808 60.000 0.00 0.00 34.72 4.30
976 989 1.218047 CGAGATTCGTGGCAAGGGA 59.782 57.895 0.00 0.00 34.72 4.20
977 990 2.464459 GCGAGATTCGTGGCAAGGG 61.464 63.158 0.00 0.00 42.81 3.95
978 991 2.464459 GGCGAGATTCGTGGCAAGG 61.464 63.158 0.00 0.00 42.81 3.61
979 992 2.802667 CGGCGAGATTCGTGGCAAG 61.803 63.158 0.00 0.00 42.81 4.01
980 993 2.813474 CGGCGAGATTCGTGGCAA 60.813 61.111 0.00 0.00 42.81 4.52
983 996 4.812476 TGGCGGCGAGATTCGTGG 62.812 66.667 12.98 0.00 42.81 4.94
984 997 2.586079 ATGGCGGCGAGATTCGTG 60.586 61.111 12.98 0.00 42.81 4.35
985 998 2.586079 CATGGCGGCGAGATTCGT 60.586 61.111 12.98 0.00 42.81 3.85
1095 1108 1.021390 GGATCTTGGTGTCGGTGCAG 61.021 60.000 0.00 0.00 0.00 4.41
1246 1259 0.768622 AGGAGGGAGATCTCGTCGAT 59.231 55.000 16.46 5.64 34.74 3.59
1341 1362 2.348666 CCGAGCAAATGTAGAGAAACCG 59.651 50.000 0.00 0.00 0.00 4.44
1346 1367 1.568504 ACCCCGAGCAAATGTAGAGA 58.431 50.000 0.00 0.00 0.00 3.10
1351 1372 2.159382 CAAGTTACCCCGAGCAAATGT 58.841 47.619 0.00 0.00 0.00 2.71
1363 1384 4.039366 AGGATCTAGCGAATCCAAGTTACC 59.961 45.833 14.80 0.00 36.95 2.85
1376 1397 2.647875 CGCAGGGAGGATCTAGCG 59.352 66.667 0.00 0.00 41.19 4.26
1397 1418 1.411394 CGCATTTCCACAAGCACTTG 58.589 50.000 8.82 8.82 45.58 3.16
1399 1420 1.526575 CCCGCATTTCCACAAGCACT 61.527 55.000 0.00 0.00 0.00 4.40
1423 1444 3.246112 CCCCAACCGACCCTCACA 61.246 66.667 0.00 0.00 0.00 3.58
1427 1448 2.388610 AACAACCCCAACCGACCCT 61.389 57.895 0.00 0.00 0.00 4.34
1474 1495 1.345415 CCAGCAAAGGCCAAAACAGAT 59.655 47.619 5.01 0.00 42.56 2.90
1488 1509 2.418368 ACGCTAATTCCATCCAGCAA 57.582 45.000 0.00 0.00 33.55 3.91
1498 1519 5.277828 GGATCATACCAACCAACGCTAATTC 60.278 44.000 0.00 0.00 0.00 2.17
1526 1547 3.510719 TCAATAAATTGCGCAGAAAGCC 58.489 40.909 11.31 0.00 36.88 4.35
1535 1556 6.132056 GCTGTGACTAGATCAATAAATTGCG 58.868 40.000 0.00 0.00 39.72 4.85
1542 1563 5.481824 CCCTATGGCTGTGACTAGATCAATA 59.518 44.000 0.00 0.00 39.72 1.90
1554 1575 0.465705 ATCGTCACCCTATGGCTGTG 59.534 55.000 0.00 0.00 33.59 3.66
1555 1576 0.465705 CATCGTCACCCTATGGCTGT 59.534 55.000 0.00 0.00 33.59 4.40
1646 1675 0.179045 AGGCATCGGTCCATGTTAGC 60.179 55.000 0.00 0.00 0.00 3.09
1653 1682 0.327924 ATTGTGAAGGCATCGGTCCA 59.672 50.000 0.00 0.00 0.00 4.02
1659 1688 3.628942 TGCTGACATATTGTGAAGGCATC 59.371 43.478 0.00 0.00 0.00 3.91
1668 1697 3.025978 CCCCAACATGCTGACATATTGT 58.974 45.455 0.00 0.00 38.73 2.71
1673 1702 0.632835 ATCCCCCAACATGCTGACAT 59.367 50.000 0.00 0.00 36.79 3.06
1722 1751 4.105697 AGAGGAAAACTGTGGGGTTATGAA 59.894 41.667 0.00 0.00 0.00 2.57
1723 1752 3.655777 AGAGGAAAACTGTGGGGTTATGA 59.344 43.478 0.00 0.00 0.00 2.15
1724 1753 4.034285 AGAGGAAAACTGTGGGGTTATG 57.966 45.455 0.00 0.00 0.00 1.90
1729 1758 4.010349 GTTCATAGAGGAAAACTGTGGGG 58.990 47.826 0.00 0.00 0.00 4.96
1732 1761 6.207417 ACCATTGTTCATAGAGGAAAACTGTG 59.793 38.462 0.00 0.00 0.00 3.66
1736 1765 6.318900 CCCTACCATTGTTCATAGAGGAAAAC 59.681 42.308 0.00 0.00 0.00 2.43
1857 1886 0.811616 ATTCGCCTTGAGCCGACATC 60.812 55.000 0.00 0.00 38.78 3.06
1900 1957 6.318648 TGCTTGATGAAATAAGAATTACCGCT 59.681 34.615 0.00 0.00 30.46 5.52
2034 2091 7.231317 AGAGAATAATTTGCTGGTGAAAGTGAA 59.769 33.333 0.00 0.00 0.00 3.18
2140 2198 7.993821 TTAAGCAACGATTCAACATGAAAAA 57.006 28.000 0.00 0.00 40.12 1.94
2237 2295 8.948631 TGAGATTTAGGTTTCATATCACAGAC 57.051 34.615 0.00 0.00 0.00 3.51
2342 2400 4.036852 GTCTCCTTAAGGCAATAACCATGC 59.963 45.833 17.32 0.00 43.08 4.06
2389 2447 6.014755 TGGCTGGACAATGAATCACAAAATAA 60.015 34.615 0.00 0.00 0.00 1.40
2411 2469 6.442112 GTTTCTAGCATTCTAAATGGATGGC 58.558 40.000 2.17 0.00 0.00 4.40
2600 2663 1.755179 ATCACAGCAACCATACTGGC 58.245 50.000 0.00 0.00 42.67 4.85
2601 2664 4.142609 ACTATCACAGCAACCATACTGG 57.857 45.455 0.00 0.00 45.02 4.00
2602 2665 5.163723 CCAAACTATCACAGCAACCATACTG 60.164 44.000 0.00 0.00 39.86 2.74
2603 2666 4.943705 CCAAACTATCACAGCAACCATACT 59.056 41.667 0.00 0.00 0.00 2.12
2604 2667 4.700213 ACCAAACTATCACAGCAACCATAC 59.300 41.667 0.00 0.00 0.00 2.39
2716 2780 0.105964 TTGACACTTGACACCCTCCG 59.894 55.000 0.00 0.00 0.00 4.63
2793 2857 3.685139 TGCCCAAACAAAGAAAACACA 57.315 38.095 0.00 0.00 0.00 3.72
2835 2899 0.550914 TCACCTGGCCAAGTTCTTGT 59.449 50.000 7.01 0.00 0.00 3.16
2862 2926 6.697641 TTTTCAGTTGATAGGGTTAGAGGT 57.302 37.500 0.00 0.00 0.00 3.85
2893 2957 4.580995 ACCATGGTTTATCGAAACACACAA 59.419 37.500 13.00 0.00 45.78 3.33
2905 3328 3.825908 ACAGGTTCCACCATGGTTTAT 57.174 42.857 16.84 0.00 41.95 1.40
2963 3386 1.451028 GAGGTGGCTGATGGAGTGC 60.451 63.158 0.00 0.00 0.00 4.40
2984 3407 3.937706 GCTACCATATTCCATAGCTGCTG 59.062 47.826 13.43 0.00 37.62 4.41
3033 3456 6.147581 CAGATGGTGAAACAGTCATGAAAAG 58.852 40.000 0.00 0.00 39.98 2.27
3103 3526 2.989571 GGGGGATGGGAATAGTTGAGAT 59.010 50.000 0.00 0.00 0.00 2.75
3114 3537 2.908263 TCAGAATTAGGGGGATGGGA 57.092 50.000 0.00 0.00 0.00 4.37
3117 3540 4.889995 GGAGTTTTCAGAATTAGGGGGATG 59.110 45.833 0.00 0.00 0.00 3.51
3142 3565 4.595781 AGTCTCAACCAATACCAACTACCA 59.404 41.667 0.00 0.00 0.00 3.25
3171 3594 4.278669 TCTTCATCTATTGTAGCCGGAGAC 59.721 45.833 5.05 1.52 0.00 3.36
3185 3608 8.603898 TGGGACAAACTATACTTCTTCATCTA 57.396 34.615 0.00 0.00 31.92 1.98
3313 3737 5.163663 ACACACGACAAAAATGACTGAACAT 60.164 36.000 0.00 0.00 0.00 2.71
3360 3784 3.255642 TGAGGCCTACAAAATGCAAAGAC 59.744 43.478 4.42 0.00 0.00 3.01
3529 3953 6.854381 AGAATTCGCTTGGTTAAAAGTTTACG 59.146 34.615 0.00 0.00 0.00 3.18
3530 3954 7.858879 TCAGAATTCGCTTGGTTAAAAGTTTAC 59.141 33.333 0.00 0.00 0.00 2.01
3584 4008 9.231297 CCTTTGTTGAATTCAAGAACCTAGATA 57.769 33.333 25.51 11.72 38.58 1.98
3585 4009 7.309438 GCCTTTGTTGAATTCAAGAACCTAGAT 60.309 37.037 25.51 0.00 38.58 1.98
3635 4059 2.676471 GCACCGCACCCATCCTTT 60.676 61.111 0.00 0.00 0.00 3.11
3860 4284 1.057851 TCAGGGACCCCTTCACGTTT 61.058 55.000 7.00 0.00 45.70 3.60
3992 4429 0.798159 TTGCGTACAATCAGCTGCAG 59.202 50.000 10.11 10.11 33.41 4.41
3994 4431 1.197721 AGTTTGCGTACAATCAGCTGC 59.802 47.619 9.47 0.00 35.21 5.25
4062 4499 6.677920 GCATAAAATGACTCGCAATAGGTTGT 60.678 38.462 0.00 0.00 37.65 3.32
4063 4500 5.682862 GCATAAAATGACTCGCAATAGGTTG 59.317 40.000 0.00 0.00 38.39 3.77
4064 4501 5.504010 CGCATAAAATGACTCGCAATAGGTT 60.504 40.000 0.00 0.00 0.00 3.50
4105 4543 8.078959 TGATTTGAATTTCAATGCAAAGAGTG 57.921 30.769 12.39 0.00 44.76 3.51
4121 4559 3.054434 TCTGTCCGTCCCATGATTTGAAT 60.054 43.478 0.00 0.00 0.00 2.57
4133 4571 1.872679 GCGAACGATCTGTCCGTCC 60.873 63.158 0.00 0.00 39.57 4.79
4140 4578 4.765611 TCGACAGCGAACGATCTG 57.234 55.556 0.00 0.00 44.78 2.90
4185 4624 0.179111 TTCTGATCGGGCATGACGAC 60.179 55.000 13.91 9.40 43.78 4.34
4340 4779 3.181461 GGACCTGCGACCTAGTAGTAGTA 60.181 52.174 3.91 0.00 0.00 1.82
4341 4780 2.421248 GGACCTGCGACCTAGTAGTAGT 60.421 54.545 3.91 0.00 0.00 2.73
4342 4781 2.220313 GGACCTGCGACCTAGTAGTAG 58.780 57.143 0.00 0.00 0.00 2.57
4377 4816 0.037017 TCATTCGCCTTCCGGGAAAA 59.963 50.000 11.24 2.46 45.53 2.29
4386 4832 0.984230 TTCCTCACCTCATTCGCCTT 59.016 50.000 0.00 0.00 0.00 4.35
4412 4858 1.967779 GATACAGCTCCCCTTCTCTCC 59.032 57.143 0.00 0.00 0.00 3.71
4416 4862 2.023501 ACAGAGATACAGCTCCCCTTCT 60.024 50.000 0.00 0.00 35.49 2.85
4434 4882 0.179020 TGTTGCCACAAGGGAGACAG 60.179 55.000 0.00 0.00 40.01 3.51
4549 4997 1.202065 CGTCATGCACACAGTAATGGC 60.202 52.381 0.00 0.00 0.00 4.40
4566 5014 0.388134 TAACGACTGCTTCCTGCGTC 60.388 55.000 0.00 0.00 46.63 5.19
4567 5015 0.666577 GTAACGACTGCTTCCTGCGT 60.667 55.000 0.00 0.00 46.63 5.24
4568 5016 1.352156 GGTAACGACTGCTTCCTGCG 61.352 60.000 0.00 0.00 46.63 5.18
4592 5040 3.324993 CATTTTCCATGAAACCAACGGG 58.675 45.455 0.00 0.00 41.29 5.28
4594 5042 3.184178 GTGCATTTTCCATGAAACCAACG 59.816 43.478 0.00 0.00 30.83 4.10
4598 5046 2.730928 CGTGTGCATTTTCCATGAAACC 59.269 45.455 0.00 0.00 30.83 3.27
4710 5162 2.888834 GCAAAGAAGCCAAGGAAACA 57.111 45.000 0.00 0.00 0.00 2.83
4742 5195 0.108774 TTATTGGTGCGGTGTGGTCA 59.891 50.000 0.00 0.00 0.00 4.02
4748 5201 2.294791 TGGTTTCTTTATTGGTGCGGTG 59.705 45.455 0.00 0.00 0.00 4.94
4796 5256 0.977674 GATTTCTGTTTTCGCAGCGC 59.022 50.000 10.87 0.00 36.49 5.92
4797 5257 2.236690 CAGATTTCTGTTTTCGCAGCG 58.763 47.619 9.06 9.06 39.09 5.18
4798 5258 1.981533 GCAGATTTCTGTTTTCGCAGC 59.018 47.619 9.21 0.00 45.45 5.25
4799 5259 3.272439 TGCAGATTTCTGTTTTCGCAG 57.728 42.857 9.21 0.00 45.45 5.18
4800 5260 3.066621 AGTTGCAGATTTCTGTTTTCGCA 59.933 39.130 9.21 0.00 45.45 5.10
4801 5261 3.632189 AGTTGCAGATTTCTGTTTTCGC 58.368 40.909 9.21 0.00 45.45 4.70
4802 5262 7.132213 TCTTTAGTTGCAGATTTCTGTTTTCG 58.868 34.615 9.21 0.00 45.45 3.46
4803 5263 8.746751 GTTCTTTAGTTGCAGATTTCTGTTTTC 58.253 33.333 9.21 0.00 45.45 2.29
4804 5264 8.470002 AGTTCTTTAGTTGCAGATTTCTGTTTT 58.530 29.630 9.21 0.00 45.45 2.43
4805 5265 8.000780 AGTTCTTTAGTTGCAGATTTCTGTTT 57.999 30.769 9.21 0.00 45.45 2.83
4806 5266 7.500559 AGAGTTCTTTAGTTGCAGATTTCTGTT 59.499 33.333 9.21 0.00 45.45 3.16
4807 5267 6.995091 AGAGTTCTTTAGTTGCAGATTTCTGT 59.005 34.615 9.21 0.00 45.45 3.41
4808 5268 7.432350 AGAGTTCTTTAGTTGCAGATTTCTG 57.568 36.000 3.13 3.13 46.40 3.02
4809 5269 8.457238 AAAGAGTTCTTTAGTTGCAGATTTCT 57.543 30.769 5.35 0.00 43.73 2.52
4810 5270 9.521503 AAAAAGAGTTCTTTAGTTGCAGATTTC 57.478 29.630 7.49 0.00 44.69 2.17
4870 5331 5.242393 ACATCTTTTTCCATGTCACAAGAGG 59.758 40.000 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.