Multiple sequence alignment - TraesCS5A01G371600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G371600 chr5A 100.000 5643 0 0 1 5643 570378079 570372437 0.000000e+00 10421.0
1 TraesCS5A01G371600 chr5A 90.909 77 7 0 4921 4997 416180084 416180008 2.780000e-18 104.0
2 TraesCS5A01G371600 chr5B 96.509 2607 52 14 2143 4736 551410485 551407905 0.000000e+00 4274.0
3 TraesCS5A01G371600 chr5B 91.871 1058 50 19 105 1155 551414245 551413217 0.000000e+00 1445.0
4 TraesCS5A01G371600 chr5B 99.080 761 7 0 1153 1913 551411238 551410478 0.000000e+00 1367.0
5 TraesCS5A01G371600 chr5B 89.266 177 18 1 5264 5440 551406784 551406609 2.650000e-53 220.0
6 TraesCS5A01G371600 chr5B 92.174 115 9 0 5017 5131 551407794 551407680 4.520000e-36 163.0
7 TraesCS5A01G371600 chr5B 97.561 41 1 0 5202 5242 551407618 551407578 2.820000e-08 71.3
8 TraesCS5A01G371600 chr5D 93.909 1888 67 14 43 1913 451178368 451176512 0.000000e+00 2806.0
9 TraesCS5A01G371600 chr5D 97.495 1637 27 5 2567 4190 451176011 451174376 0.000000e+00 2784.0
10 TraesCS5A01G371600 chr5D 98.826 426 5 0 2143 2568 451176519 451176094 0.000000e+00 760.0
11 TraesCS5A01G371600 chr5D 89.434 530 24 15 4221 4750 451174375 451173878 1.710000e-179 640.0
12 TraesCS5A01G371600 chr5D 90.654 214 18 2 5009 5220 451173737 451173524 3.330000e-72 283.0
13 TraesCS5A01G371600 chr5D 93.750 144 9 0 5250 5393 451173525 451173382 3.420000e-52 217.0
14 TraesCS5A01G371600 chr5D 88.889 63 6 1 1859 1921 540241070 540241009 6.060000e-10 76.8
15 TraesCS5A01G371600 chr6B 83.369 1401 187 25 2214 3601 419773900 419775267 0.000000e+00 1254.0
16 TraesCS5A01G371600 chr6B 83.588 1310 162 26 132 1425 419771324 419772596 0.000000e+00 1179.0
17 TraesCS5A01G371600 chr6B 83.499 503 68 12 3613 4112 419775335 419775825 6.660000e-124 455.0
18 TraesCS5A01G371600 chr6B 89.041 73 6 2 4330 4400 717631570 717631498 7.790000e-14 89.8
19 TraesCS5A01G371600 chr4B 96.943 229 2 2 1914 2142 328325347 328325570 4.130000e-101 379.0
20 TraesCS5A01G371600 chr4B 86.260 131 12 5 4161 4290 526929414 526929289 2.740000e-28 137.0
21 TraesCS5A01G371600 chr4B 92.958 71 5 0 4922 4992 643486826 643486896 2.780000e-18 104.0
22 TraesCS5A01G371600 chr4B 88.506 87 6 3 4922 5004 158279445 158279359 1.000000e-17 102.0
23 TraesCS5A01G371600 chr4B 86.957 69 8 1 1853 1921 659336494 659336561 6.060000e-10 76.8
24 TraesCS5A01G371600 chr4A 96.552 232 2 2 1914 2145 728102078 728101853 4.130000e-101 379.0
25 TraesCS5A01G371600 chr4A 83.516 91 7 5 4301 4390 200093505 200093588 1.690000e-10 78.7
26 TraesCS5A01G371600 chr4A 86.957 69 6 3 4747 4812 683493882 683493814 2.180000e-09 75.0
27 TraesCS5A01G371600 chr6A 96.121 232 2 3 1914 2145 155798771 155798547 6.900000e-99 372.0
28 TraesCS5A01G371600 chr2A 95.690 232 6 1 1914 2145 98164033 98163806 2.480000e-98 370.0
29 TraesCS5A01G371600 chr2A 83.721 129 16 4 4164 4291 18322388 18322512 3.570000e-22 117.0
30 TraesCS5A01G371600 chr2A 80.986 142 20 5 4156 4297 210471993 210472127 7.730000e-19 106.0
31 TraesCS5A01G371600 chr2A 87.838 74 7 2 4330 4401 177658398 177658325 1.010000e-12 86.1
32 TraesCS5A01G371600 chr2A 92.000 50 3 1 4336 4384 591280058 591280009 1.010000e-07 69.4
33 TraesCS5A01G371600 chr2B 96.070 229 3 2 1914 2142 118592451 118592673 8.930000e-98 368.0
34 TraesCS5A01G371600 chr2B 96.070 229 4 2 1914 2142 217832335 217832558 8.930000e-98 368.0
35 TraesCS5A01G371600 chr2B 94.372 231 9 1 1912 2142 635027954 635028180 9.000000e-93 351.0
36 TraesCS5A01G371600 chr2B 86.813 91 8 3 2146 2234 753998839 753998751 1.290000e-16 99.0
37 TraesCS5A01G371600 chr2B 87.952 83 8 2 4922 5003 532220942 532221023 4.650000e-16 97.1
38 TraesCS5A01G371600 chr2B 87.059 85 11 0 4922 5006 611343422 611343338 4.650000e-16 97.1
39 TraesCS5A01G371600 chr2B 91.176 68 6 0 2146 2213 185812904 185812837 6.020000e-15 93.5
40 TraesCS5A01G371600 chr2B 88.889 72 6 2 4336 4406 247368604 247368534 2.800000e-13 87.9
41 TraesCS5A01G371600 chr2B 88.235 68 7 1 1847 1913 583416667 583416734 4.690000e-11 80.5
42 TraesCS5A01G371600 chr2B 89.231 65 1 4 4747 4806 745584087 745584024 6.060000e-10 76.8
43 TraesCS5A01G371600 chr2B 95.238 42 2 0 4771 4812 52415348 52415389 3.650000e-07 67.6
44 TraesCS5A01G371600 chr2B 92.857 42 3 0 4771 4812 52436370 52436329 1.700000e-05 62.1
45 TraesCS5A01G371600 chrUn 93.033 244 10 4 1908 2149 94366060 94366298 3.240000e-92 350.0
46 TraesCS5A01G371600 chr7D 93.913 230 9 2 1913 2142 20304938 20304714 5.410000e-90 342.0
47 TraesCS5A01G371600 chr7D 82.576 132 18 4 4160 4290 611253735 611253608 1.660000e-20 111.0
48 TraesCS5A01G371600 chr7D 95.522 67 3 0 4922 4988 386760811 386760877 2.150000e-19 108.0
49 TraesCS5A01G371600 chr7D 90.789 76 7 0 4922 4997 618877823 618877748 1.000000e-17 102.0
50 TraesCS5A01G371600 chr7D 88.889 63 7 0 1855 1917 15466461 15466399 1.690000e-10 78.7
51 TraesCS5A01G371600 chr2D 85.075 134 14 5 4156 4289 195294880 195295007 1.280000e-26 132.0
52 TraesCS5A01G371600 chr2D 87.838 74 7 2 4330 4401 172409677 172409750 1.010000e-12 86.1
53 TraesCS5A01G371600 chr2D 87.838 74 7 2 4330 4401 624096802 624096875 1.010000e-12 86.1
54 TraesCS5A01G371600 chr7B 85.039 127 15 3 4164 4290 700413929 700413807 5.940000e-25 126.0
55 TraesCS5A01G371600 chr7B 87.324 71 9 0 2143 2213 533773409 533773479 1.300000e-11 82.4
56 TraesCS5A01G371600 chr7B 97.297 37 1 0 4770 4806 577188551 577188515 4.720000e-06 63.9
57 TraesCS5A01G371600 chr7A 84.252 127 16 3 4164 4290 701301510 701301388 2.760000e-23 121.0
58 TraesCS5A01G371600 chr7A 89.706 68 7 0 2146 2213 730456816 730456749 2.800000e-13 87.9
59 TraesCS5A01G371600 chr7A 87.179 78 7 3 4326 4401 183841914 183841990 1.010000e-12 86.1
60 TraesCS5A01G371600 chr7A 92.857 42 3 0 4771 4812 178026759 178026718 1.700000e-05 62.1
61 TraesCS5A01G371600 chr3D 84.375 128 15 4 4164 4290 437486538 437486661 2.760000e-23 121.0
62 TraesCS5A01G371600 chr3D 87.324 71 9 0 2143 2213 172356630 172356700 1.300000e-11 82.4
63 TraesCS5A01G371600 chr3B 93.243 74 5 0 2143 2216 501232722 501232795 5.980000e-20 110.0
64 TraesCS5A01G371600 chr3B 91.892 74 6 0 4922 4995 29258411 29258338 2.780000e-18 104.0
65 TraesCS5A01G371600 chr1D 91.892 74 6 0 4922 4995 90578248 90578321 2.780000e-18 104.0
66 TraesCS5A01G371600 chr6D 90.323 62 6 0 1852 1913 86642552 86642613 1.300000e-11 82.4
67 TraesCS5A01G371600 chr6D 86.486 74 10 0 2143 2216 413075547 413075620 1.300000e-11 82.4
68 TraesCS5A01G371600 chr6D 93.023 43 3 0 4770 4812 68866189 68866147 4.720000e-06 63.9
69 TraesCS5A01G371600 chr4D 89.062 64 6 1 1858 1921 366693476 366693414 1.690000e-10 78.7
70 TraesCS5A01G371600 chr4D 97.297 37 1 0 4770 4806 493840547 493840511 4.720000e-06 63.9
71 TraesCS5A01G371600 chr1A 85.714 70 9 1 1852 1921 457952003 457952071 7.840000e-09 73.1
72 TraesCS5A01G371600 chr1B 93.023 43 3 0 4770 4812 139673482 139673440 4.720000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G371600 chr5A 570372437 570378079 5642 True 10421.000000 10421 100.000000 1 5643 1 chr5A.!!$R2 5642
1 TraesCS5A01G371600 chr5B 551406609 551414245 7636 True 1256.716667 4274 94.410167 105 5440 6 chr5B.!!$R1 5335
2 TraesCS5A01G371600 chr5D 451173382 451178368 4986 True 1248.333333 2806 94.011333 43 5393 6 chr5D.!!$R2 5350
3 TraesCS5A01G371600 chr6B 419771324 419775825 4501 False 962.666667 1254 83.485333 132 4112 3 chr6B.!!$F1 3980


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
20 21 0.035056 GCCCTCCATGCTGTAGTGTT 60.035 55.000 0.00 0.00 0.00 3.32 F
111 112 0.463620 TGTTGCTTTTTGGACCTGCC 59.536 50.000 0.00 0.00 37.10 4.85 F
125 137 0.473755 CCTGCCTTTTTGCCCCTTTT 59.526 50.000 0.00 0.00 0.00 2.27 F
231 243 1.219124 CAGAAGAGCTAAGCGGGCA 59.781 57.895 0.00 0.00 0.00 5.36 F
1934 4796 1.676529 TGTGTTTTGATTTTCGGCCGA 59.323 42.857 27.28 27.28 0.00 5.54 F
3437 6405 1.202533 AGGATTGCCGTGTTATCCGAG 60.203 52.381 0.00 0.00 42.14 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1799 4660 1.027357 CAAAGAGTGGCTGTGTGCTT 58.973 50.000 0.00 0.00 42.39 3.91 R
1914 4776 1.676529 TCGGCCGAAAATCAAAACACA 59.323 42.857 28.99 0.00 0.00 3.72 R
2082 4944 1.934463 CCGAGATGGCCGAATTTCG 59.066 57.895 11.81 11.81 40.07 3.46 R
2117 4979 4.564769 TGTGTTTTGATTTTCGGTTTGAGC 59.435 37.500 0.00 0.00 0.00 4.26 R
3604 6578 0.100503 AACAAACAGCAACAGCCGTC 59.899 50.000 0.00 0.00 0.00 4.79 R
5003 8051 0.250234 ACCACGGTGTCATCATCCTG 59.750 55.000 7.45 0.00 0.00 3.86 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.152248 TGCCCTCCATGCTGTAGT 57.848 55.556 0.00 0.00 0.00 2.73
18 19 1.603842 TGCCCTCCATGCTGTAGTG 59.396 57.895 0.00 0.00 0.00 2.74
19 20 1.200760 TGCCCTCCATGCTGTAGTGT 61.201 55.000 0.00 0.00 0.00 3.55
20 21 0.035056 GCCCTCCATGCTGTAGTGTT 60.035 55.000 0.00 0.00 0.00 3.32
21 22 1.742761 CCCTCCATGCTGTAGTGTTG 58.257 55.000 0.00 0.00 0.00 3.33
22 23 1.278985 CCCTCCATGCTGTAGTGTTGA 59.721 52.381 0.00 0.00 0.00 3.18
23 24 2.625737 CCTCCATGCTGTAGTGTTGAG 58.374 52.381 0.00 0.00 0.00 3.02
24 25 2.005451 CTCCATGCTGTAGTGTTGAGC 58.995 52.381 0.00 0.00 0.00 4.26
25 26 1.625315 TCCATGCTGTAGTGTTGAGCT 59.375 47.619 0.00 0.00 33.66 4.09
26 27 2.831526 TCCATGCTGTAGTGTTGAGCTA 59.168 45.455 0.00 0.00 33.66 3.32
27 28 3.260632 TCCATGCTGTAGTGTTGAGCTAA 59.739 43.478 0.00 0.00 33.66 3.09
28 29 3.620374 CCATGCTGTAGTGTTGAGCTAAG 59.380 47.826 0.00 0.00 33.66 2.18
29 30 4.498241 CATGCTGTAGTGTTGAGCTAAGA 58.502 43.478 0.00 0.00 33.66 2.10
30 31 4.600692 TGCTGTAGTGTTGAGCTAAGAA 57.399 40.909 0.00 0.00 33.66 2.52
31 32 4.956085 TGCTGTAGTGTTGAGCTAAGAAA 58.044 39.130 0.00 0.00 33.66 2.52
32 33 5.551233 TGCTGTAGTGTTGAGCTAAGAAAT 58.449 37.500 0.00 0.00 33.66 2.17
33 34 5.997746 TGCTGTAGTGTTGAGCTAAGAAATT 59.002 36.000 0.00 0.00 33.66 1.82
34 35 7.158697 TGCTGTAGTGTTGAGCTAAGAAATTA 58.841 34.615 0.00 0.00 33.66 1.40
35 36 7.659799 TGCTGTAGTGTTGAGCTAAGAAATTAA 59.340 33.333 0.00 0.00 33.66 1.40
36 37 7.958025 GCTGTAGTGTTGAGCTAAGAAATTAAC 59.042 37.037 0.00 0.00 0.00 2.01
37 38 9.209175 CTGTAGTGTTGAGCTAAGAAATTAACT 57.791 33.333 0.00 0.00 0.00 2.24
38 39 9.555727 TGTAGTGTTGAGCTAAGAAATTAACTT 57.444 29.630 0.00 3.86 0.00 2.66
46 47 9.672673 TGAGCTAAGAAATTAACTTATGAAGCT 57.327 29.630 14.53 14.53 37.88 3.74
69 70 6.752815 GCTGGTACTAGTGTCTCTTTGATTAC 59.247 42.308 5.39 0.00 0.00 1.89
72 73 8.304596 TGGTACTAGTGTCTCTTTGATTACTTG 58.695 37.037 5.39 0.00 0.00 3.16
73 74 8.305317 GGTACTAGTGTCTCTTTGATTACTTGT 58.695 37.037 5.39 0.00 36.08 3.16
81 82 7.439356 TGTCTCTTTGATTACTTGTTCTGTGAG 59.561 37.037 0.00 0.00 0.00 3.51
88 89 9.607988 TTGATTACTTGTTCTGTGAGAGTTTTA 57.392 29.630 0.00 0.00 0.00 1.52
101 102 7.319646 TGTGAGAGTTTTACAATGTTGCTTTT 58.680 30.769 0.00 0.00 0.00 2.27
103 104 8.110002 GTGAGAGTTTTACAATGTTGCTTTTTG 58.890 33.333 0.00 0.00 0.00 2.44
104 105 7.277539 TGAGAGTTTTACAATGTTGCTTTTTGG 59.722 33.333 0.00 0.00 0.00 3.28
105 106 7.327214 AGAGTTTTACAATGTTGCTTTTTGGA 58.673 30.769 0.00 0.00 0.00 3.53
106 107 7.277760 AGAGTTTTACAATGTTGCTTTTTGGAC 59.722 33.333 0.00 0.00 0.00 4.02
107 108 6.315144 AGTTTTACAATGTTGCTTTTTGGACC 59.685 34.615 0.00 0.00 0.00 4.46
111 112 0.463620 TGTTGCTTTTTGGACCTGCC 59.536 50.000 0.00 0.00 37.10 4.85
121 133 2.583441 GGACCTGCCTTTTTGCCCC 61.583 63.158 0.00 0.00 0.00 5.80
125 137 0.473755 CCTGCCTTTTTGCCCCTTTT 59.526 50.000 0.00 0.00 0.00 2.27
153 165 7.823745 AAGAAAAATTTCTGCTTCAGTCCTA 57.176 32.000 9.05 0.00 46.22 2.94
177 189 4.881850 GGGAAGATGCGGAAAAATAAGAGA 59.118 41.667 0.00 0.00 0.00 3.10
186 198 4.631813 CGGAAAAATAAGAGAGGTGGTGAG 59.368 45.833 0.00 0.00 0.00 3.51
203 215 3.883830 TGAGGATCTCACAAGAAGCTC 57.116 47.619 0.00 0.00 35.39 4.09
204 216 3.168292 TGAGGATCTCACAAGAAGCTCA 58.832 45.455 0.00 0.00 35.39 4.26
226 238 2.770164 TGGGAACAGAAGAGCTAAGC 57.230 50.000 0.00 0.00 35.01 3.09
231 243 1.219124 CAGAAGAGCTAAGCGGGCA 59.781 57.895 0.00 0.00 0.00 5.36
254 266 6.183360 GCAACGATGATCTCAAAAGAATCTCA 60.183 38.462 0.00 0.00 34.49 3.27
318 330 3.076621 TCATCTTCTTTTCAGCATGCGT 58.923 40.909 13.01 0.00 34.76 5.24
327 339 2.686558 TCAGCATGCGTTTTTCACTC 57.313 45.000 13.01 0.00 34.76 3.51
332 344 2.472488 GCATGCGTTTTTCACTCCTTTG 59.528 45.455 0.00 0.00 0.00 2.77
346 358 3.209410 CTCCTTTGTTTGAGCACTCACT 58.791 45.455 0.00 0.00 39.66 3.41
347 359 3.206150 TCCTTTGTTTGAGCACTCACTC 58.794 45.455 0.00 0.00 39.66 3.51
348 360 3.118261 TCCTTTGTTTGAGCACTCACTCT 60.118 43.478 0.00 0.00 39.66 3.24
349 361 3.629398 CCTTTGTTTGAGCACTCACTCTT 59.371 43.478 0.00 0.00 39.66 2.85
350 362 4.096984 CCTTTGTTTGAGCACTCACTCTTT 59.903 41.667 0.00 0.00 39.66 2.52
351 363 5.393461 CCTTTGTTTGAGCACTCACTCTTTT 60.393 40.000 0.00 0.00 39.66 2.27
352 364 5.643379 TTGTTTGAGCACTCACTCTTTTT 57.357 34.783 0.00 0.00 39.66 1.94
403 415 7.495934 TGCTGTATGATTCTTCTTTAACTAGGC 59.504 37.037 0.00 0.00 0.00 3.93
404 416 7.495934 GCTGTATGATTCTTCTTTAACTAGGCA 59.504 37.037 0.00 0.00 0.00 4.75
537 549 9.403110 CACACTTCTTTATTTCCAAGAAATCTG 57.597 33.333 5.86 0.00 39.28 2.90
550 563 9.965824 TTCCAAGAAATCTGTAGAAATGTTTTC 57.034 29.630 0.00 0.00 0.00 2.29
613 631 4.222145 TCTGTAGGGGACACACTGTTATTC 59.778 45.833 0.00 0.00 33.31 1.75
759 777 4.584325 TGCTGCCAATCATCCCTTAATAAC 59.416 41.667 0.00 0.00 0.00 1.89
1108 1133 5.300752 AGGTACACTTGCACTATGATATGC 58.699 41.667 0.00 0.00 42.40 3.14
1720 4581 2.219080 TGATCCATTTTGCTGCTGGA 57.781 45.000 10.32 10.32 42.95 3.86
1799 4660 4.142337 TGTTCAATCGCTATCAAGACGGTA 60.142 41.667 0.00 0.00 0.00 4.02
1919 4781 9.775539 AGATATGGATATATGTAGACCTGTGTT 57.224 33.333 0.00 0.00 29.67 3.32
1922 4784 8.908786 ATGGATATATGTAGACCTGTGTTTTG 57.091 34.615 0.00 0.00 0.00 2.44
1923 4785 8.084985 TGGATATATGTAGACCTGTGTTTTGA 57.915 34.615 0.00 0.00 0.00 2.69
1924 4786 8.713971 TGGATATATGTAGACCTGTGTTTTGAT 58.286 33.333 0.00 0.00 0.00 2.57
1925 4787 9.561069 GGATATATGTAGACCTGTGTTTTGATT 57.439 33.333 0.00 0.00 0.00 2.57
1929 4791 6.055231 TGTAGACCTGTGTTTTGATTTTCG 57.945 37.500 0.00 0.00 0.00 3.46
1930 4792 4.568152 AGACCTGTGTTTTGATTTTCGG 57.432 40.909 0.00 0.00 0.00 4.30
1931 4793 3.049912 GACCTGTGTTTTGATTTTCGGC 58.950 45.455 0.00 0.00 0.00 5.54
1932 4794 2.223947 ACCTGTGTTTTGATTTTCGGCC 60.224 45.455 0.00 0.00 0.00 6.13
1933 4795 2.050691 CTGTGTTTTGATTTTCGGCCG 58.949 47.619 22.12 22.12 0.00 6.13
1934 4796 1.676529 TGTGTTTTGATTTTCGGCCGA 59.323 42.857 27.28 27.28 0.00 5.54
1935 4797 2.099263 TGTGTTTTGATTTTCGGCCGAA 59.901 40.909 35.81 35.81 0.00 4.30
1936 4798 3.117046 GTGTTTTGATTTTCGGCCGAAA 58.883 40.909 41.63 41.63 41.69 3.46
1960 4822 6.484364 AAAATGGATTTATTTCGGCCATCT 57.516 33.333 2.24 0.00 38.33 2.90
1961 4823 5.712152 AATGGATTTATTTCGGCCATCTC 57.288 39.130 2.24 0.00 38.33 2.75
1962 4824 3.138304 TGGATTTATTTCGGCCATCTCG 58.862 45.455 2.24 0.00 0.00 4.04
1963 4825 2.484264 GGATTTATTTCGGCCATCTCGG 59.516 50.000 2.24 0.00 38.11 4.63
1980 4842 4.657952 GCCTGGGGCGAAAAGTAT 57.342 55.556 0.00 0.00 39.62 2.12
1981 4843 3.792712 GCCTGGGGCGAAAAGTATA 57.207 52.632 0.00 0.00 39.62 1.47
1982 4844 2.271944 GCCTGGGGCGAAAAGTATAT 57.728 50.000 0.00 0.00 39.62 0.86
1983 4845 2.583143 GCCTGGGGCGAAAAGTATATT 58.417 47.619 0.00 0.00 39.62 1.28
1984 4846 2.956333 GCCTGGGGCGAAAAGTATATTT 59.044 45.455 0.00 0.00 39.62 1.40
1985 4847 4.139038 GCCTGGGGCGAAAAGTATATTTA 58.861 43.478 0.00 0.00 39.62 1.40
1986 4848 4.215613 GCCTGGGGCGAAAAGTATATTTAG 59.784 45.833 0.00 0.00 39.62 1.85
1987 4849 4.760204 CCTGGGGCGAAAAGTATATTTAGG 59.240 45.833 0.00 0.00 0.00 2.69
1988 4850 4.139038 TGGGGCGAAAAGTATATTTAGGC 58.861 43.478 0.00 0.00 38.92 3.93
1990 4852 3.187842 GGGCGAAAAGTATATTTAGGCCG 59.812 47.826 9.07 0.00 45.54 6.13
1991 4853 4.060205 GGCGAAAAGTATATTTAGGCCGA 58.940 43.478 0.00 0.00 35.44 5.54
1992 4854 4.512571 GGCGAAAAGTATATTTAGGCCGAA 59.487 41.667 0.00 0.00 35.44 4.30
1993 4855 5.007921 GGCGAAAAGTATATTTAGGCCGAAA 59.992 40.000 13.75 13.75 35.44 3.46
1994 4856 6.293790 GGCGAAAAGTATATTTAGGCCGAAAT 60.294 38.462 24.62 24.62 35.44 2.17
1995 4857 7.136772 GCGAAAAGTATATTTAGGCCGAAATT 58.863 34.615 26.06 16.64 31.51 1.82
1996 4858 7.112984 GCGAAAAGTATATTTAGGCCGAAATTG 59.887 37.037 26.06 7.91 31.51 2.32
1997 4859 7.112984 CGAAAAGTATATTTAGGCCGAAATTGC 59.887 37.037 26.06 17.09 31.51 3.56
1998 4860 7.582667 AAAGTATATTTAGGCCGAAATTGCT 57.417 32.000 26.06 18.63 31.51 3.91
1999 4861 6.803154 AGTATATTTAGGCCGAAATTGCTC 57.197 37.500 26.06 15.01 31.51 4.26
2000 4862 6.296026 AGTATATTTAGGCCGAAATTGCTCA 58.704 36.000 26.06 10.61 31.51 4.26
2001 4863 6.770785 AGTATATTTAGGCCGAAATTGCTCAA 59.229 34.615 26.06 9.94 31.51 3.02
2002 4864 4.799564 ATTTAGGCCGAAATTGCTCAAA 57.200 36.364 17.19 0.00 0.00 2.69
2003 4865 4.799564 TTTAGGCCGAAATTGCTCAAAT 57.200 36.364 6.97 0.00 0.00 2.32
2004 4866 4.799564 TTAGGCCGAAATTGCTCAAATT 57.200 36.364 0.00 0.00 40.32 1.82
2006 4868 3.328505 AGGCCGAAATTGCTCAAATTTG 58.671 40.909 12.15 12.15 46.29 2.32
2007 4869 2.416202 GGCCGAAATTGCTCAAATTTGG 59.584 45.455 17.90 10.84 46.29 3.28
2008 4870 3.066380 GCCGAAATTGCTCAAATTTGGT 58.934 40.909 17.90 0.00 46.29 3.67
2009 4871 4.241681 GCCGAAATTGCTCAAATTTGGTA 58.758 39.130 17.90 5.93 46.29 3.25
2010 4872 4.688413 GCCGAAATTGCTCAAATTTGGTAA 59.312 37.500 17.90 13.72 46.29 2.85
2011 4873 5.178438 GCCGAAATTGCTCAAATTTGGTAAA 59.822 36.000 17.90 9.91 46.29 2.01
2012 4874 6.128309 GCCGAAATTGCTCAAATTTGGTAAAT 60.128 34.615 17.90 11.55 46.29 1.40
2013 4875 7.572910 GCCGAAATTGCTCAAATTTGGTAAATT 60.573 33.333 17.90 15.90 46.29 1.82
2014 4876 8.288913 CCGAAATTGCTCAAATTTGGTAAATTT 58.711 29.630 23.51 23.51 46.29 1.82
2015 4877 9.662545 CGAAATTGCTCAAATTTGGTAAATTTT 57.337 25.926 23.80 16.21 46.01 1.82
2017 4879 9.747293 AAATTGCTCAAATTTGGTAAATTTTGG 57.253 25.926 17.90 6.84 46.01 3.28
2018 4880 7.872113 TTGCTCAAATTTGGTAAATTTTGGT 57.128 28.000 17.90 0.00 46.01 3.67
2019 4881 7.489574 TGCTCAAATTTGGTAAATTTTGGTC 57.510 32.000 17.90 2.27 46.01 4.02
2020 4882 7.050377 TGCTCAAATTTGGTAAATTTTGGTCA 58.950 30.769 17.90 4.20 46.01 4.02
2021 4883 7.554118 TGCTCAAATTTGGTAAATTTTGGTCAA 59.446 29.630 17.90 0.00 46.01 3.18
2022 4884 8.401709 GCTCAAATTTGGTAAATTTTGGTCAAA 58.598 29.630 17.90 3.61 46.01 2.69
2037 4899 7.401484 TTTGGTCAAATTTAAGTCAAATCGC 57.599 32.000 0.00 0.00 35.74 4.58
2038 4900 6.078202 TGGTCAAATTTAAGTCAAATCGCA 57.922 33.333 0.00 0.00 35.74 5.10
2039 4901 6.148948 TGGTCAAATTTAAGTCAAATCGCAG 58.851 36.000 0.00 0.00 35.74 5.18
2040 4902 6.149633 GGTCAAATTTAAGTCAAATCGCAGT 58.850 36.000 0.00 0.00 35.74 4.40
2041 4903 6.640907 GGTCAAATTTAAGTCAAATCGCAGTT 59.359 34.615 0.00 0.00 35.74 3.16
2042 4904 7.806014 GGTCAAATTTAAGTCAAATCGCAGTTA 59.194 33.333 0.00 0.00 35.74 2.24
2043 4905 9.176181 GTCAAATTTAAGTCAAATCGCAGTTAA 57.824 29.630 0.00 0.00 35.74 2.01
2044 4906 9.737427 TCAAATTTAAGTCAAATCGCAGTTAAA 57.263 25.926 0.00 0.00 35.74 1.52
2050 4912 9.737427 TTAAGTCAAATCGCAGTTAAAATTTGA 57.263 25.926 5.51 5.51 42.66 2.69
2051 4913 8.816640 AAGTCAAATCGCAGTTAAAATTTGAT 57.183 26.923 11.26 0.00 45.00 2.57
2052 4914 8.452989 AGTCAAATCGCAGTTAAAATTTGATC 57.547 30.769 11.26 6.80 45.00 2.92
2053 4915 8.081633 AGTCAAATCGCAGTTAAAATTTGATCA 58.918 29.630 11.26 0.00 45.00 2.92
2054 4916 8.698854 GTCAAATCGCAGTTAAAATTTGATCAA 58.301 29.630 3.38 3.38 45.00 2.57
2055 4917 9.254133 TCAAATCGCAGTTAAAATTTGATCAAA 57.746 25.926 22.52 22.52 41.01 2.69
2080 4942 5.921004 TCAGCCGAAATTTTTGAAAATGG 57.079 34.783 2.71 2.11 38.53 3.16
2081 4943 4.213059 TCAGCCGAAATTTTTGAAAATGGC 59.787 37.500 15.69 15.69 41.56 4.40
2082 4944 3.501828 AGCCGAAATTTTTGAAAATGGCC 59.498 39.130 18.09 0.00 41.89 5.36
2083 4945 3.666638 GCCGAAATTTTTGAAAATGGCCG 60.667 43.478 13.79 11.43 38.25 6.13
2084 4946 3.743396 CCGAAATTTTTGAAAATGGCCGA 59.257 39.130 0.00 0.00 38.53 5.54
2085 4947 4.212214 CCGAAATTTTTGAAAATGGCCGAA 59.788 37.500 0.00 0.00 38.53 4.30
2086 4948 5.277538 CCGAAATTTTTGAAAATGGCCGAAA 60.278 36.000 0.00 0.00 38.53 3.46
2087 4949 6.369799 CGAAATTTTTGAAAATGGCCGAAAT 58.630 32.000 0.00 0.00 38.53 2.17
2088 4950 6.855403 CGAAATTTTTGAAAATGGCCGAAATT 59.145 30.769 0.00 0.00 38.53 1.82
2089 4951 7.059374 CGAAATTTTTGAAAATGGCCGAAATTC 59.941 33.333 0.00 0.56 38.53 2.17
2090 4952 4.981389 TTTTGAAAATGGCCGAAATTCG 57.019 36.364 8.62 8.62 40.07 3.34
2100 4962 1.934463 CGAAATTCGGCCATCTCGG 59.066 57.895 7.61 0.00 36.00 4.63
2135 4997 6.976636 AAAAAGCTCAAACCGAAAATCAAA 57.023 29.167 0.00 0.00 0.00 2.69
2136 4998 6.976636 AAAAGCTCAAACCGAAAATCAAAA 57.023 29.167 0.00 0.00 0.00 2.44
2137 4999 5.966636 AAGCTCAAACCGAAAATCAAAAC 57.033 34.783 0.00 0.00 0.00 2.43
2138 5000 5.004922 AGCTCAAACCGAAAATCAAAACA 57.995 34.783 0.00 0.00 0.00 2.83
2139 5001 4.803613 AGCTCAAACCGAAAATCAAAACAC 59.196 37.500 0.00 0.00 0.00 3.32
2140 5002 4.564769 GCTCAAACCGAAAATCAAAACACA 59.435 37.500 0.00 0.00 0.00 3.72
2141 5003 5.276348 GCTCAAACCGAAAATCAAAACACAG 60.276 40.000 0.00 0.00 0.00 3.66
2177 5039 9.882996 CGTTTTAGTGTTAGATACATCCGTATA 57.117 33.333 0.00 0.00 38.48 1.47
2295 5157 1.576421 GAACCCTTGTGCTCGCAAG 59.424 57.895 14.37 14.37 43.88 4.01
2442 5306 5.062308 GGTCTTCATAAGTAGTGCAAGTTCG 59.938 44.000 0.00 0.00 0.00 3.95
3292 6260 9.948964 TGATTGATTTCTGTTCTTTAGAGATCA 57.051 29.630 0.00 0.00 41.34 2.92
3437 6405 1.202533 AGGATTGCCGTGTTATCCGAG 60.203 52.381 0.00 0.00 42.14 4.63
3604 6578 5.064707 CACATGTAAAATCAGTAAGGTCGGG 59.935 44.000 0.00 0.00 0.00 5.14
3663 6693 2.219674 GGAAGCTAATCGTCGCATCAAG 59.780 50.000 0.00 0.00 0.00 3.02
3771 6802 5.126384 CCCCTTTTTAATATGCGTGGAGAAA 59.874 40.000 0.00 0.00 0.00 2.52
4333 7372 9.378551 TGTGCACTAATATAGAGGTTTTTACAG 57.621 33.333 19.41 0.00 0.00 2.74
4334 7373 9.379791 GTGCACTAATATAGAGGTTTTTACAGT 57.620 33.333 10.32 0.00 0.00 3.55
4409 7449 4.473559 TGTAGGGAGGGAGTAATTTGGAAG 59.526 45.833 0.00 0.00 0.00 3.46
4413 7453 1.930204 AGGGAGTAATTTGGAAGGGGG 59.070 52.381 0.00 0.00 0.00 5.40
4580 7620 6.183360 CGAGGAGTTCAGATACGGATACATAG 60.183 46.154 0.00 0.00 0.00 2.23
4607 7647 7.146648 GGGAACGAGATATAGAAACCTTGTAG 58.853 42.308 0.00 0.00 0.00 2.74
4625 7665 2.121963 AGGAGTGCTGGGTTCCCA 60.122 61.111 10.37 10.37 34.56 4.37
4703 7743 1.817740 GCTTGGGTTGGCTAACACTCA 60.818 52.381 16.73 7.64 40.92 3.41
4750 7797 2.600867 CTGCGCTGTTTAGAAGCTACTC 59.399 50.000 9.73 0.00 38.57 2.59
4752 7799 2.541556 CGCTGTTTAGAAGCTACTCCC 58.458 52.381 0.00 0.00 38.57 4.30
4753 7800 2.166664 CGCTGTTTAGAAGCTACTCCCT 59.833 50.000 0.00 0.00 38.57 4.20
4754 7801 3.735514 CGCTGTTTAGAAGCTACTCCCTC 60.736 52.174 0.00 0.00 38.57 4.30
4755 7802 3.431068 GCTGTTTAGAAGCTACTCCCTCC 60.431 52.174 0.00 0.00 37.69 4.30
4756 7803 2.758979 TGTTTAGAAGCTACTCCCTCCG 59.241 50.000 0.00 0.00 0.00 4.63
4757 7804 2.759535 GTTTAGAAGCTACTCCCTCCGT 59.240 50.000 0.00 0.00 0.00 4.69
4758 7805 2.345124 TAGAAGCTACTCCCTCCGTC 57.655 55.000 0.00 0.00 0.00 4.79
4759 7806 0.396001 AGAAGCTACTCCCTCCGTCC 60.396 60.000 0.00 0.00 0.00 4.79
4760 7807 1.381463 AAGCTACTCCCTCCGTCCC 60.381 63.158 0.00 0.00 0.00 4.46
4761 7808 2.043248 GCTACTCCCTCCGTCCCA 60.043 66.667 0.00 0.00 0.00 4.37
4762 7809 1.684734 GCTACTCCCTCCGTCCCAA 60.685 63.158 0.00 0.00 0.00 4.12
4763 7810 1.262640 GCTACTCCCTCCGTCCCAAA 61.263 60.000 0.00 0.00 0.00 3.28
4764 7811 1.272807 CTACTCCCTCCGTCCCAAAA 58.727 55.000 0.00 0.00 0.00 2.44
4765 7812 1.626825 CTACTCCCTCCGTCCCAAAAA 59.373 52.381 0.00 0.00 0.00 1.94
4786 7833 7.859325 AAAAAGTGTTGTACTAAAGCTGAGA 57.141 32.000 2.97 0.00 39.18 3.27
4787 7834 6.846325 AAAGTGTTGTACTAAAGCTGAGAC 57.154 37.500 2.97 0.00 39.18 3.36
4788 7835 5.531122 AGTGTTGTACTAAAGCTGAGACA 57.469 39.130 2.97 1.31 38.04 3.41
4789 7836 5.290386 AGTGTTGTACTAAAGCTGAGACAC 58.710 41.667 2.97 6.67 38.04 3.67
4790 7837 5.069251 AGTGTTGTACTAAAGCTGAGACACT 59.931 40.000 12.07 12.07 40.01 3.55
4791 7838 5.753921 GTGTTGTACTAAAGCTGAGACACTT 59.246 40.000 2.97 0.00 33.87 3.16
4792 7839 6.921857 GTGTTGTACTAAAGCTGAGACACTTA 59.078 38.462 2.97 0.00 33.87 2.24
4793 7840 7.599245 GTGTTGTACTAAAGCTGAGACACTTAT 59.401 37.037 2.97 0.00 33.87 1.73
4794 7841 8.148351 TGTTGTACTAAAGCTGAGACACTTATT 58.852 33.333 2.97 0.00 0.00 1.40
4795 7842 8.989980 GTTGTACTAAAGCTGAGACACTTATTT 58.010 33.333 2.97 0.00 0.00 1.40
4796 7843 9.555727 TTGTACTAAAGCTGAGACACTTATTTT 57.444 29.630 2.97 0.00 0.00 1.82
4797 7844 8.988934 TGTACTAAAGCTGAGACACTTATTTTG 58.011 33.333 2.97 0.00 0.00 2.44
4798 7845 7.440523 ACTAAAGCTGAGACACTTATTTTGG 57.559 36.000 2.97 0.00 0.00 3.28
4799 7846 5.712152 AAAGCTGAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
4800 7847 4.640771 AGCTGAGACACTTATTTTGGGA 57.359 40.909 0.00 0.00 0.00 4.37
4801 7848 4.327680 AGCTGAGACACTTATTTTGGGAC 58.672 43.478 0.00 0.00 0.00 4.46
4802 7849 4.072131 GCTGAGACACTTATTTTGGGACA 58.928 43.478 0.00 0.00 0.00 4.02
4803 7850 4.154918 GCTGAGACACTTATTTTGGGACAG 59.845 45.833 0.00 0.00 42.39 3.51
4804 7851 5.551233 CTGAGACACTTATTTTGGGACAGA 58.449 41.667 0.00 0.00 42.39 3.41
4805 7852 5.551233 TGAGACACTTATTTTGGGACAGAG 58.449 41.667 0.00 0.00 42.39 3.35
4806 7853 5.071788 TGAGACACTTATTTTGGGACAGAGT 59.928 40.000 0.00 0.00 42.39 3.24
4807 7854 6.269077 TGAGACACTTATTTTGGGACAGAGTA 59.731 38.462 0.00 0.00 42.39 2.59
4808 7855 7.074653 AGACACTTATTTTGGGACAGAGTAA 57.925 36.000 0.00 0.00 42.39 2.24
4809 7856 7.162082 AGACACTTATTTTGGGACAGAGTAAG 58.838 38.462 0.00 0.00 44.35 2.34
4815 7862 9.804758 CTTATTTTGGGACAGAGTAAGTACTAG 57.195 37.037 0.00 0.00 42.39 2.57
4816 7863 6.600882 TTTTGGGACAGAGTAAGTACTAGG 57.399 41.667 0.00 0.00 42.39 3.02
4817 7864 4.246712 TGGGACAGAGTAAGTACTAGGG 57.753 50.000 0.00 0.00 36.50 3.53
4818 7865 2.957680 GGGACAGAGTAAGTACTAGGGC 59.042 54.545 0.00 0.00 36.50 5.19
4819 7866 3.372892 GGGACAGAGTAAGTACTAGGGCT 60.373 52.174 0.00 0.00 36.50 5.19
4820 7867 3.633065 GGACAGAGTAAGTACTAGGGCTG 59.367 52.174 0.00 5.08 36.50 4.85
4821 7868 4.271661 GACAGAGTAAGTACTAGGGCTGT 58.728 47.826 16.48 16.48 39.12 4.40
4822 7869 5.435291 GACAGAGTAAGTACTAGGGCTGTA 58.565 45.833 16.49 0.00 37.61 2.74
4823 7870 5.438833 ACAGAGTAAGTACTAGGGCTGTAG 58.561 45.833 15.51 0.00 36.50 2.74
4847 7895 5.927115 GGACAATCTCTTGTTCTTAGTCGTT 59.073 40.000 0.00 0.00 45.57 3.85
4853 7901 7.869016 TCTCTTGTTCTTAGTCGTTGTAATG 57.131 36.000 0.00 0.00 0.00 1.90
4879 7927 4.830046 ACTCTGTTCTTAGTGAGCTCTTGA 59.170 41.667 16.19 3.19 0.00 3.02
4901 7949 5.303589 TGAGTGTGTACCTAGCTAACTGTTT 59.696 40.000 0.00 0.00 0.00 2.83
4912 7960 1.333619 CTAACTGTTTGTGCGTTGCCT 59.666 47.619 0.00 0.00 0.00 4.75
4930 7978 3.575965 CCTAGGGCAACAAAATGTGAC 57.424 47.619 0.00 0.00 39.74 3.67
4931 7979 3.157087 CCTAGGGCAACAAAATGTGACT 58.843 45.455 0.00 0.00 39.74 3.41
4932 7980 3.573967 CCTAGGGCAACAAAATGTGACTT 59.426 43.478 0.00 0.00 39.74 3.01
4933 7981 3.457610 AGGGCAACAAAATGTGACTTG 57.542 42.857 0.00 0.00 39.74 3.16
4934 7982 3.030291 AGGGCAACAAAATGTGACTTGA 58.970 40.909 0.00 0.00 39.74 3.02
4935 7983 3.642848 AGGGCAACAAAATGTGACTTGAT 59.357 39.130 0.00 0.00 39.74 2.57
4936 7984 4.832266 AGGGCAACAAAATGTGACTTGATA 59.168 37.500 0.00 0.00 39.74 2.15
4937 7985 4.923281 GGGCAACAAAATGTGACTTGATAC 59.077 41.667 0.00 0.00 39.74 2.24
4938 7986 5.508825 GGGCAACAAAATGTGACTTGATACA 60.509 40.000 0.00 0.00 39.74 2.29
4939 7987 6.158598 GGCAACAAAATGTGACTTGATACAT 58.841 36.000 0.00 0.00 39.08 2.29
4940 7988 6.646240 GGCAACAAAATGTGACTTGATACATT 59.354 34.615 0.00 0.00 46.33 2.71
4981 8029 9.151471 TCTAAGACAAGAATTTTGATACGAAGG 57.849 33.333 0.00 0.00 0.00 3.46
4982 8030 6.743575 AGACAAGAATTTTGATACGAAGGG 57.256 37.500 0.00 0.00 0.00 3.95
4983 8031 6.472887 AGACAAGAATTTTGATACGAAGGGA 58.527 36.000 0.00 0.00 0.00 4.20
4997 8045 9.947433 TGATACGAAGGGAGTATAAAAGAAAAA 57.053 29.630 0.00 0.00 35.19 1.94
5002 8050 9.989869 CGAAGGGAGTATAAAAGAAAAATCTTC 57.010 33.333 0.00 0.00 0.00 2.87
5004 8052 9.822727 AAGGGAGTATAAAAGAAAAATCTTCCA 57.177 29.630 0.00 0.00 0.00 3.53
5005 8053 9.467796 AGGGAGTATAAAAGAAAAATCTTCCAG 57.532 33.333 0.00 0.00 0.00 3.86
5007 8055 9.462606 GGAGTATAAAAGAAAAATCTTCCAGGA 57.537 33.333 0.00 0.00 0.00 3.86
5063 8121 0.698238 ATGTTTGGCCCTGTGCTCTA 59.302 50.000 0.00 0.00 40.92 2.43
5067 8125 2.820037 GGCCCTGTGCTCTAACGC 60.820 66.667 0.00 0.00 40.92 4.84
5123 8181 3.733960 TCGTCGAGCTCCGGTGTG 61.734 66.667 8.47 0.00 39.14 3.82
5247 8338 7.417612 AGTCAACAAACATGAACATTCTACAC 58.582 34.615 0.00 0.00 0.00 2.90
5248 8339 6.636850 GTCAACAAACATGAACATTCTACACC 59.363 38.462 0.00 0.00 0.00 4.16
5252 8343 6.147164 ACAAACATGAACATTCTACACCTACG 59.853 38.462 0.00 0.00 0.00 3.51
5338 9201 4.518249 TGTGCGACAAATGGGATATACAA 58.482 39.130 0.00 0.00 0.00 2.41
5356 9219 1.373590 AACAGCAAGCAACGGTCGTT 61.374 50.000 2.65 2.65 39.13 3.85
5373 9236 0.727398 GTTGTGCAGCGGAATCCTAC 59.273 55.000 0.00 0.00 0.00 3.18
5395 9258 0.742990 GGCGCATACAGGCAACACTA 60.743 55.000 10.83 0.00 41.41 2.74
5413 9276 1.017177 TACAAACCGGCGCTCACATC 61.017 55.000 7.64 0.00 0.00 3.06
5425 9288 1.600957 GCTCACATCGACATGAATGGG 59.399 52.381 0.00 1.41 33.72 4.00
5426 9289 1.600957 CTCACATCGACATGAATGGGC 59.399 52.381 0.00 0.00 33.72 5.36
5431 9294 3.219198 GACATGAATGGGCCGGCC 61.219 66.667 38.57 38.57 0.00 6.13
5441 9304 4.547367 GGCCGGCCGATGTAAGCT 62.547 66.667 33.60 0.00 0.00 3.74
5442 9305 3.272334 GCCGGCCGATGTAAGCTG 61.272 66.667 30.73 7.40 35.04 4.24
5443 9306 2.186903 CCGGCCGATGTAAGCTGT 59.813 61.111 30.73 0.00 33.32 4.40
5444 9307 1.883084 CCGGCCGATGTAAGCTGTC 60.883 63.158 30.73 0.00 33.32 3.51
5445 9308 2.230940 CGGCCGATGTAAGCTGTCG 61.231 63.158 24.07 0.00 35.29 4.35
5452 9315 3.223953 CGATGTAAGCTGTCGGTATACG 58.776 50.000 0.00 0.00 46.11 3.06
5453 9316 3.303593 CGATGTAAGCTGTCGGTATACGT 60.304 47.826 0.00 0.00 44.69 3.57
5454 9317 3.409851 TGTAAGCTGTCGGTATACGTG 57.590 47.619 0.00 0.00 44.69 4.49
5455 9318 3.009026 TGTAAGCTGTCGGTATACGTGA 58.991 45.455 0.00 0.00 44.69 4.35
5456 9319 3.439825 TGTAAGCTGTCGGTATACGTGAA 59.560 43.478 0.00 0.00 44.69 3.18
5457 9320 3.795623 AAGCTGTCGGTATACGTGAAT 57.204 42.857 0.00 0.00 44.69 2.57
5458 9321 3.079960 AGCTGTCGGTATACGTGAATG 57.920 47.619 0.00 0.00 44.69 2.67
5459 9322 2.124903 GCTGTCGGTATACGTGAATGG 58.875 52.381 0.00 0.00 44.69 3.16
5460 9323 2.739292 CTGTCGGTATACGTGAATGGG 58.261 52.381 0.00 0.00 44.69 4.00
5461 9324 2.359848 CTGTCGGTATACGTGAATGGGA 59.640 50.000 0.00 0.00 44.69 4.37
5462 9325 2.099592 TGTCGGTATACGTGAATGGGAC 59.900 50.000 0.00 0.00 44.69 4.46
5463 9326 2.360165 GTCGGTATACGTGAATGGGACT 59.640 50.000 0.00 0.00 44.69 3.85
5464 9327 2.359848 TCGGTATACGTGAATGGGACTG 59.640 50.000 0.00 0.00 44.69 3.51
5465 9328 2.100252 CGGTATACGTGAATGGGACTGT 59.900 50.000 0.00 0.00 37.93 3.55
5466 9329 3.429822 CGGTATACGTGAATGGGACTGTT 60.430 47.826 0.00 0.00 37.93 3.16
5467 9330 3.869246 GGTATACGTGAATGGGACTGTTG 59.131 47.826 0.00 0.00 0.00 3.33
5468 9331 3.695830 ATACGTGAATGGGACTGTTGT 57.304 42.857 0.00 0.00 0.00 3.32
5469 9332 1.878953 ACGTGAATGGGACTGTTGTC 58.121 50.000 0.00 0.00 42.22 3.18
5470 9333 1.416401 ACGTGAATGGGACTGTTGTCT 59.584 47.619 0.00 0.00 42.54 3.41
5471 9334 2.069273 CGTGAATGGGACTGTTGTCTC 58.931 52.381 0.00 0.00 43.77 3.36
5472 9335 2.427506 GTGAATGGGACTGTTGTCTCC 58.572 52.381 0.00 0.00 42.86 3.71
5473 9336 1.001974 TGAATGGGACTGTTGTCTCCG 59.998 52.381 0.00 0.00 42.86 4.63
5474 9337 0.324943 AATGGGACTGTTGTCTCCGG 59.675 55.000 0.00 0.00 42.86 5.14
5475 9338 0.836400 ATGGGACTGTTGTCTCCGGT 60.836 55.000 0.00 0.00 42.86 5.28
5476 9339 1.052124 TGGGACTGTTGTCTCCGGTT 61.052 55.000 0.00 0.00 42.86 4.44
5477 9340 0.108019 GGGACTGTTGTCTCCGGTTT 59.892 55.000 0.00 0.00 42.54 3.27
5478 9341 1.476291 GGGACTGTTGTCTCCGGTTTT 60.476 52.381 0.00 0.00 42.54 2.43
5479 9342 1.602377 GGACTGTTGTCTCCGGTTTTG 59.398 52.381 0.00 0.00 42.54 2.44
5480 9343 1.602377 GACTGTTGTCTCCGGTTTTGG 59.398 52.381 0.00 0.00 39.94 3.28
5481 9344 0.951558 CTGTTGTCTCCGGTTTTGGG 59.048 55.000 0.00 0.00 0.00 4.12
5482 9345 0.256464 TGTTGTCTCCGGTTTTGGGT 59.744 50.000 0.00 0.00 0.00 4.51
5483 9346 1.489649 TGTTGTCTCCGGTTTTGGGTA 59.510 47.619 0.00 0.00 0.00 3.69
5484 9347 2.092538 TGTTGTCTCCGGTTTTGGGTAA 60.093 45.455 0.00 0.00 0.00 2.85
5485 9348 2.259266 TGTCTCCGGTTTTGGGTAAC 57.741 50.000 0.00 0.00 0.00 2.50
5486 9349 1.770061 TGTCTCCGGTTTTGGGTAACT 59.230 47.619 0.00 0.00 0.00 2.24
5487 9350 2.173143 TGTCTCCGGTTTTGGGTAACTT 59.827 45.455 0.00 0.00 0.00 2.66
5488 9351 3.216800 GTCTCCGGTTTTGGGTAACTTT 58.783 45.455 0.00 0.00 0.00 2.66
5489 9352 3.633525 GTCTCCGGTTTTGGGTAACTTTT 59.366 43.478 0.00 0.00 0.00 2.27
5490 9353 3.884693 TCTCCGGTTTTGGGTAACTTTTC 59.115 43.478 0.00 0.00 0.00 2.29
5491 9354 2.617774 TCCGGTTTTGGGTAACTTTTCG 59.382 45.455 0.00 0.00 0.00 3.46
5492 9355 2.387185 CGGTTTTGGGTAACTTTTCGC 58.613 47.619 0.00 0.00 0.00 4.70
5493 9356 2.746269 GGTTTTGGGTAACTTTTCGCC 58.254 47.619 0.00 0.00 0.00 5.54
5494 9357 2.101082 GGTTTTGGGTAACTTTTCGCCA 59.899 45.455 0.00 0.00 0.00 5.69
5495 9358 3.377439 GTTTTGGGTAACTTTTCGCCAG 58.623 45.455 0.00 0.00 0.00 4.85
5496 9359 2.351706 TTGGGTAACTTTTCGCCAGT 57.648 45.000 0.00 0.00 0.00 4.00
5497 9360 2.351706 TGGGTAACTTTTCGCCAGTT 57.648 45.000 0.00 0.00 38.13 3.16
5498 9361 2.657143 TGGGTAACTTTTCGCCAGTTT 58.343 42.857 0.00 0.00 35.95 2.66
5499 9362 3.025262 TGGGTAACTTTTCGCCAGTTTT 58.975 40.909 0.00 0.00 35.95 2.43
5500 9363 3.447944 TGGGTAACTTTTCGCCAGTTTTT 59.552 39.130 0.00 0.00 35.95 1.94
5529 9392 3.853475 ACCATGCGGTTTACACTACTAC 58.147 45.455 0.00 0.00 46.31 2.73
5530 9393 2.855963 CCATGCGGTTTACACTACTACG 59.144 50.000 0.00 0.00 0.00 3.51
5531 9394 3.504863 CATGCGGTTTACACTACTACGT 58.495 45.455 0.00 0.00 0.00 3.57
5532 9395 2.932498 TGCGGTTTACACTACTACGTG 58.068 47.619 0.00 0.00 40.67 4.49
5533 9396 2.253603 GCGGTTTACACTACTACGTGG 58.746 52.381 0.00 0.00 39.19 4.94
5534 9397 2.351738 GCGGTTTACACTACTACGTGGT 60.352 50.000 10.21 10.21 39.19 4.16
5535 9398 3.857010 GCGGTTTACACTACTACGTGGTT 60.857 47.826 10.71 0.00 39.19 3.67
5536 9399 4.298332 CGGTTTACACTACTACGTGGTTT 58.702 43.478 10.71 0.00 39.19 3.27
5537 9400 4.744631 CGGTTTACACTACTACGTGGTTTT 59.255 41.667 10.71 0.00 39.19 2.43
5538 9401 5.107875 CGGTTTACACTACTACGTGGTTTTC 60.108 44.000 10.71 0.00 39.19 2.29
5539 9402 5.752955 GGTTTACACTACTACGTGGTTTTCA 59.247 40.000 10.71 0.00 39.19 2.69
5540 9403 6.292328 GGTTTACACTACTACGTGGTTTTCAC 60.292 42.308 10.71 0.00 42.74 3.18
5577 9440 9.434420 TGTTCAGTTTTTCATTTTTCATGAACT 57.566 25.926 7.89 0.00 42.64 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.105006 AGCTCAACACTACAGCATGG 57.895 50.000 0.00 0.00 43.62 3.66
7 8 4.498241 TCTTAGCTCAACACTACAGCATG 58.502 43.478 0.00 0.00 46.00 4.06
8 9 4.808414 TCTTAGCTCAACACTACAGCAT 57.192 40.909 0.00 0.00 35.46 3.79
9 10 4.600692 TTCTTAGCTCAACACTACAGCA 57.399 40.909 0.00 0.00 35.46 4.41
10 11 6.487689 AATTTCTTAGCTCAACACTACAGC 57.512 37.500 0.00 0.00 0.00 4.40
11 12 9.209175 AGTTAATTTCTTAGCTCAACACTACAG 57.791 33.333 0.00 0.00 0.00 2.74
12 13 9.555727 AAGTTAATTTCTTAGCTCAACACTACA 57.444 29.630 0.00 0.00 29.21 2.74
20 21 9.672673 AGCTTCATAAGTTAATTTCTTAGCTCA 57.327 29.630 0.00 0.00 31.62 4.26
21 22 9.928236 CAGCTTCATAAGTTAATTTCTTAGCTC 57.072 33.333 0.00 2.13 33.58 4.09
22 23 8.897752 CCAGCTTCATAAGTTAATTTCTTAGCT 58.102 33.333 0.00 0.00 35.11 3.32
23 24 8.678199 ACCAGCTTCATAAGTTAATTTCTTAGC 58.322 33.333 0.00 0.00 32.13 3.09
26 27 9.740710 AGTACCAGCTTCATAAGTTAATTTCTT 57.259 29.630 0.00 0.00 0.00 2.52
30 31 9.601217 CACTAGTACCAGCTTCATAAGTTAATT 57.399 33.333 0.00 0.00 0.00 1.40
31 32 8.759782 ACACTAGTACCAGCTTCATAAGTTAAT 58.240 33.333 0.00 0.00 0.00 1.40
32 33 8.130671 ACACTAGTACCAGCTTCATAAGTTAA 57.869 34.615 0.00 0.00 0.00 2.01
33 34 7.614583 AGACACTAGTACCAGCTTCATAAGTTA 59.385 37.037 0.00 0.00 0.00 2.24
34 35 6.437793 AGACACTAGTACCAGCTTCATAAGTT 59.562 38.462 0.00 0.00 0.00 2.66
35 36 5.952947 AGACACTAGTACCAGCTTCATAAGT 59.047 40.000 0.00 0.00 0.00 2.24
36 37 6.320164 AGAGACACTAGTACCAGCTTCATAAG 59.680 42.308 0.00 0.00 0.00 1.73
37 38 6.188407 AGAGACACTAGTACCAGCTTCATAA 58.812 40.000 0.00 0.00 0.00 1.90
38 39 5.756918 AGAGACACTAGTACCAGCTTCATA 58.243 41.667 0.00 0.00 0.00 2.15
39 40 4.605183 AGAGACACTAGTACCAGCTTCAT 58.395 43.478 0.00 0.00 0.00 2.57
40 41 4.035612 AGAGACACTAGTACCAGCTTCA 57.964 45.455 0.00 0.00 0.00 3.02
41 42 5.047943 TCAAAGAGACACTAGTACCAGCTTC 60.048 44.000 0.00 0.00 0.00 3.86
42 43 4.833380 TCAAAGAGACACTAGTACCAGCTT 59.167 41.667 0.00 0.00 0.00 3.74
43 44 4.408276 TCAAAGAGACACTAGTACCAGCT 58.592 43.478 0.00 0.00 0.00 4.24
44 45 4.785511 TCAAAGAGACACTAGTACCAGC 57.214 45.455 0.00 0.00 0.00 4.85
45 46 8.057536 AGTAATCAAAGAGACACTAGTACCAG 57.942 38.462 0.00 0.00 0.00 4.00
46 47 8.304596 CAAGTAATCAAAGAGACACTAGTACCA 58.695 37.037 0.00 0.00 0.00 3.25
69 70 7.697691 ACATTGTAAAACTCTCACAGAACAAG 58.302 34.615 0.00 0.00 0.00 3.16
72 73 6.414987 GCAACATTGTAAAACTCTCACAGAAC 59.585 38.462 0.00 0.00 0.00 3.01
73 74 6.318648 AGCAACATTGTAAAACTCTCACAGAA 59.681 34.615 0.00 0.00 0.00 3.02
81 82 7.398746 GTCCAAAAAGCAACATTGTAAAACTC 58.601 34.615 0.00 0.00 0.00 3.01
88 89 3.795877 CAGGTCCAAAAAGCAACATTGT 58.204 40.909 0.00 0.00 0.00 2.71
101 102 1.406860 GGGCAAAAAGGCAGGTCCAA 61.407 55.000 0.00 0.00 46.44 3.53
103 104 2.583441 GGGGCAAAAAGGCAGGTCC 61.583 63.158 0.00 0.00 46.44 4.46
104 105 1.121407 AAGGGGCAAAAAGGCAGGTC 61.121 55.000 0.00 0.00 46.44 3.85
105 106 0.694105 AAAGGGGCAAAAAGGCAGGT 60.694 50.000 0.00 0.00 46.44 4.00
106 107 0.473755 AAAAGGGGCAAAAAGGCAGG 59.526 50.000 0.00 0.00 46.44 4.85
107 108 2.346766 AAAAAGGGGCAAAAAGGCAG 57.653 45.000 0.00 0.00 46.44 4.85
125 137 9.313118 GGACTGAAGCAGAAATTTTTCTTTAAA 57.687 29.630 2.83 0.00 44.70 1.52
127 139 8.237811 AGGACTGAAGCAGAAATTTTTCTTTA 57.762 30.769 2.83 0.00 44.70 1.85
136 148 3.454858 TCCCTAGGACTGAAGCAGAAAT 58.545 45.455 11.48 0.00 35.18 2.17
153 165 4.855340 TCTTATTTTTCCGCATCTTCCCT 58.145 39.130 0.00 0.00 0.00 4.20
186 198 3.325293 TGTGAGCTTCTTGTGAGATCC 57.675 47.619 0.00 0.00 0.00 3.36
203 215 2.486472 AGCTCTTCTGTTCCCATGTG 57.514 50.000 0.00 0.00 0.00 3.21
204 216 3.620966 GCTTAGCTCTTCTGTTCCCATGT 60.621 47.826 0.00 0.00 0.00 3.21
226 238 1.368641 TTTGAGATCATCGTTGCCCG 58.631 50.000 0.00 0.00 38.13 6.13
231 243 6.035435 CGTGAGATTCTTTTGAGATCATCGTT 59.965 38.462 0.00 0.00 0.00 3.85
254 266 5.422331 TGGATTGTCTCTTCTATTCCTTCGT 59.578 40.000 0.00 0.00 0.00 3.85
318 330 5.047377 AGTGCTCAAACAAAGGAGTGAAAAA 60.047 36.000 0.00 0.00 33.66 1.94
327 339 3.209410 AGAGTGAGTGCTCAAACAAAGG 58.791 45.455 3.19 0.00 41.85 3.11
350 362 8.463930 AAATGTGAGTGGTCTATTCTCAAAAA 57.536 30.769 0.00 0.00 39.42 1.94
351 363 7.939039 AGAAATGTGAGTGGTCTATTCTCAAAA 59.061 33.333 0.00 0.00 39.42 2.44
352 364 7.388776 CAGAAATGTGAGTGGTCTATTCTCAAA 59.611 37.037 0.00 0.00 39.42 2.69
353 365 6.875726 CAGAAATGTGAGTGGTCTATTCTCAA 59.124 38.462 0.00 0.00 39.42 3.02
354 366 6.401394 CAGAAATGTGAGTGGTCTATTCTCA 58.599 40.000 0.00 0.00 36.12 3.27
355 367 5.293079 GCAGAAATGTGAGTGGTCTATTCTC 59.707 44.000 0.00 0.00 0.00 2.87
356 368 5.046014 AGCAGAAATGTGAGTGGTCTATTCT 60.046 40.000 0.00 0.00 0.00 2.40
357 369 5.064452 CAGCAGAAATGTGAGTGGTCTATTC 59.936 44.000 0.00 0.00 0.00 1.75
358 370 4.940046 CAGCAGAAATGTGAGTGGTCTATT 59.060 41.667 0.00 0.00 0.00 1.73
359 371 4.019860 ACAGCAGAAATGTGAGTGGTCTAT 60.020 41.667 0.00 0.00 0.00 1.98
360 372 3.324846 ACAGCAGAAATGTGAGTGGTCTA 59.675 43.478 0.00 0.00 0.00 2.59
361 373 2.105477 ACAGCAGAAATGTGAGTGGTCT 59.895 45.455 0.00 0.00 0.00 3.85
362 374 2.498167 ACAGCAGAAATGTGAGTGGTC 58.502 47.619 0.00 0.00 0.00 4.02
363 375 2.645838 ACAGCAGAAATGTGAGTGGT 57.354 45.000 0.00 0.00 0.00 4.16
364 376 4.256110 TCATACAGCAGAAATGTGAGTGG 58.744 43.478 0.00 0.00 32.02 4.00
403 415 3.328382 TTCGAGTCCCCATGTAAGTTG 57.672 47.619 0.00 0.00 0.00 3.16
404 416 3.517901 TGATTCGAGTCCCCATGTAAGTT 59.482 43.478 5.38 0.00 0.00 2.66
550 563 3.634448 TGTAAGTGGTGATGTTTGTTGGG 59.366 43.478 0.00 0.00 0.00 4.12
759 777 7.971722 TGATCACAATCATCTTAAGCAAACATG 59.028 33.333 0.00 0.00 36.98 3.21
1108 1133 6.991485 ACAACAGAAACAGATTAAAATGCG 57.009 33.333 0.00 0.00 0.00 4.73
1720 4581 7.318141 CCAAGAAAATCAATGTGACTGCTAAT 58.682 34.615 0.00 0.00 0.00 1.73
1799 4660 1.027357 CAAAGAGTGGCTGTGTGCTT 58.973 50.000 0.00 0.00 42.39 3.91
1905 4767 6.293955 CCGAAAATCAAAACACAGGTCTACAT 60.294 38.462 0.00 0.00 0.00 2.29
1906 4768 5.008217 CCGAAAATCAAAACACAGGTCTACA 59.992 40.000 0.00 0.00 0.00 2.74
1907 4769 5.449304 CCGAAAATCAAAACACAGGTCTAC 58.551 41.667 0.00 0.00 0.00 2.59
1908 4770 4.023536 GCCGAAAATCAAAACACAGGTCTA 60.024 41.667 0.00 0.00 0.00 2.59
1909 4771 3.243401 GCCGAAAATCAAAACACAGGTCT 60.243 43.478 0.00 0.00 0.00 3.85
1910 4772 3.049912 GCCGAAAATCAAAACACAGGTC 58.950 45.455 0.00 0.00 0.00 3.85
1911 4773 2.223947 GGCCGAAAATCAAAACACAGGT 60.224 45.455 0.00 0.00 0.00 4.00
1912 4774 2.403259 GGCCGAAAATCAAAACACAGG 58.597 47.619 0.00 0.00 0.00 4.00
1913 4775 2.050691 CGGCCGAAAATCAAAACACAG 58.949 47.619 24.07 0.00 0.00 3.66
1914 4776 1.676529 TCGGCCGAAAATCAAAACACA 59.323 42.857 28.99 0.00 0.00 3.72
1915 4777 2.409152 TCGGCCGAAAATCAAAACAC 57.591 45.000 28.99 0.00 0.00 3.32
1916 4778 3.438297 TTTCGGCCGAAAATCAAAACA 57.562 38.095 42.69 22.90 40.63 2.83
1936 4798 6.888105 AGATGGCCGAAATAAATCCATTTTT 58.112 32.000 0.00 0.00 37.63 1.94
1937 4799 6.484364 AGATGGCCGAAATAAATCCATTTT 57.516 33.333 0.00 0.00 37.63 1.82
1938 4800 5.278463 CGAGATGGCCGAAATAAATCCATTT 60.278 40.000 0.00 0.00 37.63 2.32
1939 4801 4.216257 CGAGATGGCCGAAATAAATCCATT 59.784 41.667 0.00 0.00 37.63 3.16
1940 4802 3.753272 CGAGATGGCCGAAATAAATCCAT 59.247 43.478 0.00 0.00 39.99 3.41
1941 4803 3.138304 CGAGATGGCCGAAATAAATCCA 58.862 45.455 0.00 0.00 0.00 3.41
1942 4804 2.484264 CCGAGATGGCCGAAATAAATCC 59.516 50.000 0.00 0.00 0.00 3.01
1943 4805 3.813529 CCGAGATGGCCGAAATAAATC 57.186 47.619 0.00 0.00 0.00 2.17
1963 4825 2.271944 ATATACTTTTCGCCCCAGGC 57.728 50.000 0.00 0.00 46.75 4.85
1964 4826 4.760204 CCTAAATATACTTTTCGCCCCAGG 59.240 45.833 0.00 0.00 0.00 4.45
1965 4827 4.215613 GCCTAAATATACTTTTCGCCCCAG 59.784 45.833 0.00 0.00 0.00 4.45
1966 4828 4.139038 GCCTAAATATACTTTTCGCCCCA 58.861 43.478 0.00 0.00 0.00 4.96
1967 4829 3.504906 GGCCTAAATATACTTTTCGCCCC 59.495 47.826 0.00 0.00 32.16 5.80
1968 4830 3.187842 CGGCCTAAATATACTTTTCGCCC 59.812 47.826 0.00 0.00 33.61 6.13
1969 4831 4.060205 TCGGCCTAAATATACTTTTCGCC 58.940 43.478 0.00 0.00 33.74 5.54
1970 4832 5.662211 TTCGGCCTAAATATACTTTTCGC 57.338 39.130 0.00 0.00 0.00 4.70
1971 4833 7.112984 GCAATTTCGGCCTAAATATACTTTTCG 59.887 37.037 15.07 0.00 0.00 3.46
1972 4834 8.135529 AGCAATTTCGGCCTAAATATACTTTTC 58.864 33.333 15.07 0.00 0.00 2.29
1973 4835 8.007405 AGCAATTTCGGCCTAAATATACTTTT 57.993 30.769 15.07 0.00 0.00 2.27
1974 4836 7.284489 TGAGCAATTTCGGCCTAAATATACTTT 59.716 33.333 15.07 0.00 0.00 2.66
1975 4837 6.770785 TGAGCAATTTCGGCCTAAATATACTT 59.229 34.615 15.07 0.00 0.00 2.24
1976 4838 6.296026 TGAGCAATTTCGGCCTAAATATACT 58.704 36.000 15.07 12.25 0.00 2.12
1977 4839 6.554334 TGAGCAATTTCGGCCTAAATATAC 57.446 37.500 15.07 8.19 0.00 1.47
1978 4840 7.575414 TTTGAGCAATTTCGGCCTAAATATA 57.425 32.000 15.07 0.00 0.00 0.86
1979 4841 6.463995 TTTGAGCAATTTCGGCCTAAATAT 57.536 33.333 15.07 5.39 0.00 1.28
1980 4842 5.906113 TTTGAGCAATTTCGGCCTAAATA 57.094 34.783 15.07 0.00 0.00 1.40
1981 4843 4.799564 TTTGAGCAATTTCGGCCTAAAT 57.200 36.364 9.37 9.37 0.00 1.40
1982 4844 4.799564 ATTTGAGCAATTTCGGCCTAAA 57.200 36.364 4.72 4.72 0.00 1.85
1983 4845 4.799564 AATTTGAGCAATTTCGGCCTAA 57.200 36.364 0.00 0.00 30.09 2.69
1984 4846 4.493547 CAAATTTGAGCAATTTCGGCCTA 58.506 39.130 13.08 0.00 42.28 3.93
1985 4847 3.328505 CAAATTTGAGCAATTTCGGCCT 58.671 40.909 13.08 0.00 42.28 5.19
1986 4848 2.416202 CCAAATTTGAGCAATTTCGGCC 59.584 45.455 19.86 0.00 42.28 6.13
1987 4849 3.066380 ACCAAATTTGAGCAATTTCGGC 58.934 40.909 19.86 0.00 42.28 5.54
1988 4850 6.777526 TTTACCAAATTTGAGCAATTTCGG 57.222 33.333 19.86 1.12 42.28 4.30
2011 4873 8.495148 GCGATTTGACTTAAATTTGACCAAAAT 58.505 29.630 0.00 2.34 39.06 1.82
2012 4874 7.492669 TGCGATTTGACTTAAATTTGACCAAAA 59.507 29.630 0.00 0.00 39.06 2.44
2013 4875 6.980978 TGCGATTTGACTTAAATTTGACCAAA 59.019 30.769 0.00 6.63 39.06 3.28
2014 4876 6.507900 TGCGATTTGACTTAAATTTGACCAA 58.492 32.000 0.00 0.00 39.06 3.67
2015 4877 6.078202 TGCGATTTGACTTAAATTTGACCA 57.922 33.333 0.00 0.00 39.06 4.02
2016 4878 6.149633 ACTGCGATTTGACTTAAATTTGACC 58.850 36.000 0.00 0.00 39.06 4.02
2017 4879 7.623268 AACTGCGATTTGACTTAAATTTGAC 57.377 32.000 0.00 0.00 39.06 3.18
2018 4880 9.737427 TTTAACTGCGATTTGACTTAAATTTGA 57.263 25.926 0.00 0.00 39.06 2.69
2024 4886 9.737427 TCAAATTTTAACTGCGATTTGACTTAA 57.263 25.926 6.33 0.00 41.17 1.85
2025 4887 9.906660 ATCAAATTTTAACTGCGATTTGACTTA 57.093 25.926 11.23 0.00 45.67 2.24
2026 4888 8.816640 ATCAAATTTTAACTGCGATTTGACTT 57.183 26.923 11.23 0.00 45.67 3.01
2027 4889 8.081633 TGATCAAATTTTAACTGCGATTTGACT 58.918 29.630 11.23 3.63 45.67 3.41
2028 4890 8.226543 TGATCAAATTTTAACTGCGATTTGAC 57.773 30.769 11.23 7.47 45.67 3.18
2029 4891 8.809159 TTGATCAAATTTTAACTGCGATTTGA 57.191 26.923 5.45 11.36 46.40 2.69
2057 4919 5.277731 GCCATTTTCAAAAATTTCGGCTGAA 60.278 36.000 3.13 3.13 39.74 3.02
2058 4920 4.213059 GCCATTTTCAAAAATTTCGGCTGA 59.787 37.500 15.51 0.00 39.74 4.26
2059 4921 4.465921 GCCATTTTCAAAAATTTCGGCTG 58.534 39.130 15.51 0.00 39.74 4.85
2060 4922 3.501828 GGCCATTTTCAAAAATTTCGGCT 59.498 39.130 19.29 0.00 41.26 5.52
2061 4923 3.666638 CGGCCATTTTCAAAAATTTCGGC 60.667 43.478 14.87 14.87 41.01 5.54
2062 4924 3.743396 TCGGCCATTTTCAAAAATTTCGG 59.257 39.130 2.24 0.00 36.52 4.30
2063 4925 4.981389 TCGGCCATTTTCAAAAATTTCG 57.019 36.364 2.24 3.97 36.52 3.46
2064 4926 7.059374 CGAATTTCGGCCATTTTCAAAAATTTC 59.941 33.333 10.95 0.00 34.90 2.17
2065 4927 6.855403 CGAATTTCGGCCATTTTCAAAAATTT 59.145 30.769 10.95 0.00 34.90 1.82
2066 4928 6.369799 CGAATTTCGGCCATTTTCAAAAATT 58.630 32.000 10.95 1.61 34.90 1.82
2067 4929 5.925907 CGAATTTCGGCCATTTTCAAAAAT 58.074 33.333 10.95 0.00 36.29 1.82
2068 4930 5.335827 CGAATTTCGGCCATTTTCAAAAA 57.664 34.783 10.95 0.00 36.00 1.94
2069 4931 4.981389 CGAATTTCGGCCATTTTCAAAA 57.019 36.364 10.95 0.00 36.00 2.44
2082 4944 1.934463 CCGAGATGGCCGAATTTCG 59.066 57.895 11.81 11.81 40.07 3.46
2112 4974 6.976636 TTTGATTTTCGGTTTGAGCTTTTT 57.023 29.167 0.00 0.00 0.00 1.94
2113 4975 6.370166 TGTTTTGATTTTCGGTTTGAGCTTTT 59.630 30.769 0.00 0.00 0.00 2.27
2114 4976 5.872070 TGTTTTGATTTTCGGTTTGAGCTTT 59.128 32.000 0.00 0.00 0.00 3.51
2115 4977 5.290885 GTGTTTTGATTTTCGGTTTGAGCTT 59.709 36.000 0.00 0.00 0.00 3.74
2116 4978 4.803613 GTGTTTTGATTTTCGGTTTGAGCT 59.196 37.500 0.00 0.00 0.00 4.09
2117 4979 4.564769 TGTGTTTTGATTTTCGGTTTGAGC 59.435 37.500 0.00 0.00 0.00 4.26
2118 4980 6.033341 TCTGTGTTTTGATTTTCGGTTTGAG 58.967 36.000 0.00 0.00 0.00 3.02
2119 4981 5.955488 TCTGTGTTTTGATTTTCGGTTTGA 58.045 33.333 0.00 0.00 0.00 2.69
2120 4982 6.255453 ACATCTGTGTTTTGATTTTCGGTTTG 59.745 34.615 0.00 0.00 34.01 2.93
2121 4983 6.337356 ACATCTGTGTTTTGATTTTCGGTTT 58.663 32.000 0.00 0.00 34.01 3.27
2122 4984 5.901552 ACATCTGTGTTTTGATTTTCGGTT 58.098 33.333 0.00 0.00 34.01 4.44
2123 4985 5.514274 ACATCTGTGTTTTGATTTTCGGT 57.486 34.783 0.00 0.00 34.01 4.69
2124 4986 6.797033 GTCTACATCTGTGTTTTGATTTTCGG 59.203 38.462 0.00 0.00 39.77 4.30
2125 4987 7.321271 GTGTCTACATCTGTGTTTTGATTTTCG 59.679 37.037 0.00 0.00 39.77 3.46
2126 4988 7.321271 CGTGTCTACATCTGTGTTTTGATTTTC 59.679 37.037 0.00 0.00 39.77 2.29
2127 4989 7.132213 CGTGTCTACATCTGTGTTTTGATTTT 58.868 34.615 0.00 0.00 39.77 1.82
2128 4990 6.260050 ACGTGTCTACATCTGTGTTTTGATTT 59.740 34.615 0.00 0.00 39.77 2.17
2129 4991 5.758296 ACGTGTCTACATCTGTGTTTTGATT 59.242 36.000 0.00 0.00 39.77 2.57
2130 4992 5.297547 ACGTGTCTACATCTGTGTTTTGAT 58.702 37.500 0.00 0.00 39.77 2.57
2131 4993 4.689071 ACGTGTCTACATCTGTGTTTTGA 58.311 39.130 0.00 0.00 39.77 2.69
2132 4994 5.403897 AACGTGTCTACATCTGTGTTTTG 57.596 39.130 0.00 0.00 39.77 2.44
2133 4995 6.431198 AAAACGTGTCTACATCTGTGTTTT 57.569 33.333 0.00 0.00 39.77 2.43
2134 4996 6.759827 ACTAAAACGTGTCTACATCTGTGTTT 59.240 34.615 0.00 0.00 39.77 2.83
2135 4997 6.200286 CACTAAAACGTGTCTACATCTGTGTT 59.800 38.462 0.00 0.00 39.77 3.32
2136 4998 5.690409 CACTAAAACGTGTCTACATCTGTGT 59.310 40.000 0.00 0.00 42.39 3.72
2137 4999 5.690409 ACACTAAAACGTGTCTACATCTGTG 59.310 40.000 0.00 0.00 44.32 3.66
2138 5000 5.839621 ACACTAAAACGTGTCTACATCTGT 58.160 37.500 0.00 0.00 44.32 3.41
2139 5001 6.764877 AACACTAAAACGTGTCTACATCTG 57.235 37.500 0.00 0.00 46.71 2.90
2140 5002 7.879070 TCTAACACTAAAACGTGTCTACATCT 58.121 34.615 0.00 0.00 46.71 2.90
2141 5003 8.684973 ATCTAACACTAAAACGTGTCTACATC 57.315 34.615 0.00 0.00 46.71 3.06
2295 5157 2.187946 CAGGGAGGCACCGACATC 59.812 66.667 0.00 0.00 40.11 3.06
2442 5306 9.109393 TGGTTATTGAGTAGAAATGCAATAGTC 57.891 33.333 0.00 0.00 35.42 2.59
3291 6259 7.655328 ACAGTGAGACTTCAGAAGTTTTCTATG 59.345 37.037 17.19 18.38 43.03 2.23
3292 6260 7.731054 ACAGTGAGACTTCAGAAGTTTTCTAT 58.269 34.615 17.19 8.29 43.03 1.98
3437 6405 3.505464 ATCAAGCTGAATCTTTGCTGC 57.495 42.857 0.00 0.00 37.11 5.25
3604 6578 0.100503 AACAAACAGCAACAGCCGTC 59.899 50.000 0.00 0.00 0.00 4.79
3663 6693 9.988815 AGACATCATGGTAATCAACTAGTAATC 57.011 33.333 0.00 0.00 0.00 1.75
3771 6802 7.445121 TCTGAATAGAAGTTCATGCCGATAAT 58.555 34.615 5.50 0.00 37.47 1.28
4205 7243 6.268825 ACGCGTCTATATACATCCAATTCT 57.731 37.500 5.58 0.00 0.00 2.40
4210 7248 6.859508 CACTAAAACGCGTCTATATACATCCA 59.140 38.462 14.44 0.00 0.00 3.41
4413 7453 6.498304 CAGCAGTTCAATGTAAATATCACCC 58.502 40.000 0.00 0.00 0.00 4.61
4580 7620 3.902467 AGGTTTCTATATCTCGTTCCCCC 59.098 47.826 0.00 0.00 0.00 5.40
4643 7683 7.094420 ACGGAGATTGATATACAGTGAGAGATG 60.094 40.741 0.00 0.00 0.00 2.90
4703 7743 5.560183 CGCATAAAAAGGTCACTTCGTTCTT 60.560 40.000 0.00 0.00 35.41 2.52
4733 7780 3.431068 GGAGGGAGTAGCTTCTAAACAGC 60.431 52.174 0.00 0.00 37.56 4.40
4762 7809 7.335924 TGTCTCAGCTTTAGTACAACACTTTTT 59.664 33.333 0.00 0.00 38.80 1.94
4763 7810 6.821665 TGTCTCAGCTTTAGTACAACACTTTT 59.178 34.615 0.00 0.00 38.80 2.27
4764 7811 6.258068 GTGTCTCAGCTTTAGTACAACACTTT 59.742 38.462 0.00 0.00 38.80 2.66
4765 7812 5.753921 GTGTCTCAGCTTTAGTACAACACTT 59.246 40.000 0.00 0.00 38.80 3.16
4766 7813 5.069251 AGTGTCTCAGCTTTAGTACAACACT 59.931 40.000 10.20 10.20 39.80 3.55
4767 7814 5.290386 AGTGTCTCAGCTTTAGTACAACAC 58.710 41.667 0.00 7.14 35.81 3.32
4768 7815 5.531122 AGTGTCTCAGCTTTAGTACAACA 57.469 39.130 0.00 0.00 0.00 3.33
4769 7816 8.535690 AATAAGTGTCTCAGCTTTAGTACAAC 57.464 34.615 0.00 0.00 0.00 3.32
4770 7817 9.555727 AAAATAAGTGTCTCAGCTTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
4771 7818 8.988934 CAAAATAAGTGTCTCAGCTTTAGTACA 58.011 33.333 0.00 0.00 0.00 2.90
4772 7819 8.443937 CCAAAATAAGTGTCTCAGCTTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
4773 7820 7.606456 CCCAAAATAAGTGTCTCAGCTTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
4774 7821 6.431234 CCCAAAATAAGTGTCTCAGCTTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
4775 7822 6.655003 TCCCAAAATAAGTGTCTCAGCTTTAG 59.345 38.462 0.00 0.00 0.00 1.85
4776 7823 6.430000 GTCCCAAAATAAGTGTCTCAGCTTTA 59.570 38.462 0.00 0.00 0.00 1.85
4777 7824 5.241728 GTCCCAAAATAAGTGTCTCAGCTTT 59.758 40.000 0.00 0.00 0.00 3.51
4778 7825 4.762251 GTCCCAAAATAAGTGTCTCAGCTT 59.238 41.667 0.00 0.00 0.00 3.74
4779 7826 4.202461 TGTCCCAAAATAAGTGTCTCAGCT 60.202 41.667 0.00 0.00 0.00 4.24
4780 7827 4.072131 TGTCCCAAAATAAGTGTCTCAGC 58.928 43.478 0.00 0.00 0.00 4.26
4781 7828 5.551233 TCTGTCCCAAAATAAGTGTCTCAG 58.449 41.667 0.00 0.00 0.00 3.35
4782 7829 5.071788 ACTCTGTCCCAAAATAAGTGTCTCA 59.928 40.000 0.00 0.00 0.00 3.27
4783 7830 5.552178 ACTCTGTCCCAAAATAAGTGTCTC 58.448 41.667 0.00 0.00 0.00 3.36
4784 7831 5.568620 ACTCTGTCCCAAAATAAGTGTCT 57.431 39.130 0.00 0.00 0.00 3.41
4785 7832 6.935208 ACTTACTCTGTCCCAAAATAAGTGTC 59.065 38.462 0.00 0.00 31.83 3.67
4786 7833 6.838382 ACTTACTCTGTCCCAAAATAAGTGT 58.162 36.000 0.00 0.00 31.83 3.55
4787 7834 8.095169 AGTACTTACTCTGTCCCAAAATAAGTG 58.905 37.037 0.00 0.00 34.26 3.16
4788 7835 8.203681 AGTACTTACTCTGTCCCAAAATAAGT 57.796 34.615 0.00 0.00 35.93 2.24
4789 7836 9.804758 CTAGTACTTACTCTGTCCCAAAATAAG 57.195 37.037 0.00 0.00 37.73 1.73
4790 7837 8.755977 CCTAGTACTTACTCTGTCCCAAAATAA 58.244 37.037 0.00 0.00 37.73 1.40
4791 7838 7.343833 CCCTAGTACTTACTCTGTCCCAAAATA 59.656 40.741 0.00 0.00 37.73 1.40
4792 7839 6.156429 CCCTAGTACTTACTCTGTCCCAAAAT 59.844 42.308 0.00 0.00 37.73 1.82
4793 7840 5.482878 CCCTAGTACTTACTCTGTCCCAAAA 59.517 44.000 0.00 0.00 37.73 2.44
4794 7841 5.021458 CCCTAGTACTTACTCTGTCCCAAA 58.979 45.833 0.00 0.00 37.73 3.28
4795 7842 4.607239 CCCTAGTACTTACTCTGTCCCAA 58.393 47.826 0.00 0.00 37.73 4.12
4796 7843 3.626729 GCCCTAGTACTTACTCTGTCCCA 60.627 52.174 0.00 0.00 37.73 4.37
4797 7844 2.957680 GCCCTAGTACTTACTCTGTCCC 59.042 54.545 0.00 0.00 37.73 4.46
4798 7845 3.633065 CAGCCCTAGTACTTACTCTGTCC 59.367 52.174 0.00 0.00 37.73 4.02
4799 7846 4.271661 ACAGCCCTAGTACTTACTCTGTC 58.728 47.826 0.00 0.00 34.52 3.51
4800 7847 4.319037 ACAGCCCTAGTACTTACTCTGT 57.681 45.455 0.00 7.62 37.73 3.41
4801 7848 4.822896 CCTACAGCCCTAGTACTTACTCTG 59.177 50.000 0.00 6.99 37.73 3.35
4802 7849 4.725810 TCCTACAGCCCTAGTACTTACTCT 59.274 45.833 0.00 0.00 37.73 3.24
4803 7850 4.821260 GTCCTACAGCCCTAGTACTTACTC 59.179 50.000 0.00 0.00 37.73 2.59
4804 7851 4.229123 TGTCCTACAGCCCTAGTACTTACT 59.771 45.833 0.00 0.00 40.24 2.24
4805 7852 4.530875 TGTCCTACAGCCCTAGTACTTAC 58.469 47.826 0.00 0.00 0.00 2.34
4806 7853 4.868172 TGTCCTACAGCCCTAGTACTTA 57.132 45.455 0.00 0.00 0.00 2.24
4807 7854 3.752359 TGTCCTACAGCCCTAGTACTT 57.248 47.619 0.00 0.00 0.00 2.24
4808 7855 3.752359 TTGTCCTACAGCCCTAGTACT 57.248 47.619 0.00 0.00 0.00 2.73
4809 7856 4.216708 AGATTGTCCTACAGCCCTAGTAC 58.783 47.826 0.00 0.00 0.00 2.73
4810 7857 4.168283 AGAGATTGTCCTACAGCCCTAGTA 59.832 45.833 0.00 0.00 0.00 1.82
4811 7858 3.052490 AGAGATTGTCCTACAGCCCTAGT 60.052 47.826 0.00 0.00 0.00 2.57
4812 7859 3.571590 AGAGATTGTCCTACAGCCCTAG 58.428 50.000 0.00 0.00 0.00 3.02
4813 7860 3.689872 AGAGATTGTCCTACAGCCCTA 57.310 47.619 0.00 0.00 0.00 3.53
4814 7861 2.503356 CAAGAGATTGTCCTACAGCCCT 59.497 50.000 0.00 0.00 0.00 5.19
4815 7862 2.237392 ACAAGAGATTGTCCTACAGCCC 59.763 50.000 0.00 0.00 0.00 5.19
4816 7863 3.618690 ACAAGAGATTGTCCTACAGCC 57.381 47.619 0.00 0.00 0.00 4.85
4817 7864 4.826556 AGAACAAGAGATTGTCCTACAGC 58.173 43.478 0.00 0.00 33.35 4.40
4818 7865 7.607250 ACTAAGAACAAGAGATTGTCCTACAG 58.393 38.462 0.00 0.00 33.35 2.74
4819 7866 7.540474 ACTAAGAACAAGAGATTGTCCTACA 57.460 36.000 0.00 0.00 33.35 2.74
4820 7867 6.748198 CGACTAAGAACAAGAGATTGTCCTAC 59.252 42.308 0.00 0.00 33.35 3.18
4821 7868 6.433404 ACGACTAAGAACAAGAGATTGTCCTA 59.567 38.462 0.00 0.00 33.35 2.94
4822 7869 5.244178 ACGACTAAGAACAAGAGATTGTCCT 59.756 40.000 0.00 0.00 33.35 3.85
4823 7870 5.471257 ACGACTAAGAACAAGAGATTGTCC 58.529 41.667 0.00 0.00 33.35 4.02
4847 7895 7.813148 GCTCACTAAGAACAGAGTAACATTACA 59.187 37.037 4.67 0.00 36.12 2.41
4853 7901 6.262193 AGAGCTCACTAAGAACAGAGTAAC 57.738 41.667 17.77 0.00 0.00 2.50
4879 7927 5.070047 ACAAACAGTTAGCTAGGTACACACT 59.930 40.000 0.00 0.00 0.00 3.55
4912 7960 4.211125 TCAAGTCACATTTTGTTGCCCTA 58.789 39.130 0.00 0.00 0.00 3.53
4955 8003 9.151471 CCTTCGTATCAAAATTCTTGTCTTAGA 57.849 33.333 0.00 0.00 0.00 2.10
4956 8004 8.391106 CCCTTCGTATCAAAATTCTTGTCTTAG 58.609 37.037 0.00 0.00 0.00 2.18
4957 8005 8.098286 TCCCTTCGTATCAAAATTCTTGTCTTA 58.902 33.333 0.00 0.00 0.00 2.10
4958 8006 6.940298 TCCCTTCGTATCAAAATTCTTGTCTT 59.060 34.615 0.00 0.00 0.00 3.01
4959 8007 6.472887 TCCCTTCGTATCAAAATTCTTGTCT 58.527 36.000 0.00 0.00 0.00 3.41
4960 8008 6.371825 ACTCCCTTCGTATCAAAATTCTTGTC 59.628 38.462 0.00 0.00 0.00 3.18
4961 8009 6.238648 ACTCCCTTCGTATCAAAATTCTTGT 58.761 36.000 0.00 0.00 0.00 3.16
4962 8010 6.743575 ACTCCCTTCGTATCAAAATTCTTG 57.256 37.500 0.00 0.00 0.00 3.02
4968 8016 9.947433 TTCTTTTATACTCCCTTCGTATCAAAA 57.053 29.630 0.00 0.00 0.00 2.44
4969 8017 9.947433 TTTCTTTTATACTCCCTTCGTATCAAA 57.053 29.630 0.00 0.00 0.00 2.69
4970 8018 9.947433 TTTTCTTTTATACTCCCTTCGTATCAA 57.053 29.630 0.00 0.00 0.00 2.57
4971 8019 9.947433 TTTTTCTTTTATACTCCCTTCGTATCA 57.053 29.630 0.00 0.00 0.00 2.15
4975 8023 9.516546 AAGATTTTTCTTTTATACTCCCTTCGT 57.483 29.630 0.00 0.00 0.00 3.85
4976 8024 9.989869 GAAGATTTTTCTTTTATACTCCCTTCG 57.010 33.333 0.00 0.00 0.00 3.79
4978 8026 9.822727 TGGAAGATTTTTCTTTTATACTCCCTT 57.177 29.630 0.00 0.00 0.00 3.95
4979 8027 9.467796 CTGGAAGATTTTTCTTTTATACTCCCT 57.532 33.333 0.00 0.00 34.07 4.20
4980 8028 8.687242 CCTGGAAGATTTTTCTTTTATACTCCC 58.313 37.037 0.00 0.00 34.07 4.30
4981 8029 9.462606 TCCTGGAAGATTTTTCTTTTATACTCC 57.537 33.333 0.00 0.00 34.07 3.85
4997 8045 2.103771 CGGTGTCATCATCCTGGAAGAT 59.896 50.000 8.56 8.56 34.07 2.40
4998 8046 1.482182 CGGTGTCATCATCCTGGAAGA 59.518 52.381 3.83 3.83 34.07 2.87
5000 8048 1.066215 CACGGTGTCATCATCCTGGAA 60.066 52.381 0.00 0.00 0.00 3.53
5002 8050 0.462581 CCACGGTGTCATCATCCTGG 60.463 60.000 7.45 0.00 0.00 4.45
5003 8051 0.250234 ACCACGGTGTCATCATCCTG 59.750 55.000 7.45 0.00 0.00 3.86
5004 8052 0.984230 AACCACGGTGTCATCATCCT 59.016 50.000 7.45 0.00 0.00 3.24
5005 8053 1.338674 TGAACCACGGTGTCATCATCC 60.339 52.381 7.45 0.00 0.00 3.51
5007 8055 2.151202 GTTGAACCACGGTGTCATCAT 58.849 47.619 7.45 0.00 0.00 2.45
5012 8069 1.088306 TTGTGTTGAACCACGGTGTC 58.912 50.000 7.45 0.00 38.20 3.67
5113 8171 2.109425 AGGAAAATACACACCGGAGC 57.891 50.000 9.46 0.00 0.00 4.70
5196 8255 8.876275 AATATGAAGCGCAATTTTGTATGATT 57.124 26.923 11.47 0.00 0.00 2.57
5247 8338 7.011950 TGTTCATAATATTTGTTCCAGCGTAGG 59.988 37.037 0.00 0.00 0.00 3.18
5248 8339 7.915508 TGTTCATAATATTTGTTCCAGCGTAG 58.084 34.615 0.00 0.00 0.00 3.51
5338 9201 1.817941 AACGACCGTTGCTTGCTGT 60.818 52.632 7.02 0.00 36.91 4.40
5356 9219 0.613260 AAGTAGGATTCCGCTGCACA 59.387 50.000 0.00 0.00 0.00 4.57
5373 9236 1.137404 GTTGCCTGTATGCGCCAAG 59.863 57.895 4.18 0.00 0.00 3.61
5395 9258 2.281484 ATGTGAGCGCCGGTTTGT 60.281 55.556 2.29 0.00 0.00 2.83
5413 9276 3.585990 GCCGGCCCATTCATGTCG 61.586 66.667 18.11 0.00 0.00 4.35
5425 9288 3.272334 CAGCTTACATCGGCCGGC 61.272 66.667 27.83 21.18 0.00 6.13
5426 9289 1.883084 GACAGCTTACATCGGCCGG 60.883 63.158 27.83 13.23 0.00 6.13
5431 9294 3.223953 CGTATACCGACAGCTTACATCG 58.776 50.000 0.00 0.00 39.56 3.84
5440 9303 2.359848 TCCCATTCACGTATACCGACAG 59.640 50.000 0.00 0.00 40.70 3.51
5441 9304 2.099592 GTCCCATTCACGTATACCGACA 59.900 50.000 0.00 0.00 40.70 4.35
5442 9305 2.360165 AGTCCCATTCACGTATACCGAC 59.640 50.000 0.00 0.00 40.70 4.79
5443 9306 2.359848 CAGTCCCATTCACGTATACCGA 59.640 50.000 0.00 0.00 40.70 4.69
5444 9307 2.100252 ACAGTCCCATTCACGTATACCG 59.900 50.000 0.00 0.00 44.03 4.02
5445 9308 3.814005 ACAGTCCCATTCACGTATACC 57.186 47.619 0.00 0.00 0.00 2.73
5446 9309 4.501071 ACAACAGTCCCATTCACGTATAC 58.499 43.478 0.00 0.00 0.00 1.47
5447 9310 4.464951 AGACAACAGTCCCATTCACGTATA 59.535 41.667 0.00 0.00 32.62 1.47
5448 9311 3.260884 AGACAACAGTCCCATTCACGTAT 59.739 43.478 0.00 0.00 32.62 3.06
5449 9312 2.631062 AGACAACAGTCCCATTCACGTA 59.369 45.455 0.00 0.00 32.62 3.57
5450 9313 1.416401 AGACAACAGTCCCATTCACGT 59.584 47.619 0.00 0.00 32.62 4.49
5451 9314 2.069273 GAGACAACAGTCCCATTCACG 58.931 52.381 0.00 0.00 32.62 4.35
5452 9315 2.427506 GGAGACAACAGTCCCATTCAC 58.572 52.381 0.00 0.00 32.62 3.18
5453 9316 1.001974 CGGAGACAACAGTCCCATTCA 59.998 52.381 0.00 0.00 32.62 2.57
5454 9317 1.676014 CCGGAGACAACAGTCCCATTC 60.676 57.143 0.00 0.00 32.62 2.67
5455 9318 0.324943 CCGGAGACAACAGTCCCATT 59.675 55.000 0.00 0.00 32.62 3.16
5456 9319 0.836400 ACCGGAGACAACAGTCCCAT 60.836 55.000 9.46 0.00 32.62 4.00
5457 9320 1.052124 AACCGGAGACAACAGTCCCA 61.052 55.000 9.46 0.00 32.62 4.37
5458 9321 0.108019 AAACCGGAGACAACAGTCCC 59.892 55.000 9.46 0.00 32.62 4.46
5459 9322 1.602377 CAAAACCGGAGACAACAGTCC 59.398 52.381 9.46 0.00 32.62 3.85
5460 9323 1.602377 CCAAAACCGGAGACAACAGTC 59.398 52.381 9.46 0.00 0.00 3.51
5461 9324 1.675552 CCAAAACCGGAGACAACAGT 58.324 50.000 9.46 0.00 0.00 3.55
5462 9325 0.951558 CCCAAAACCGGAGACAACAG 59.048 55.000 9.46 0.00 0.00 3.16
5463 9326 0.256464 ACCCAAAACCGGAGACAACA 59.744 50.000 9.46 0.00 0.00 3.33
5464 9327 2.259266 TACCCAAAACCGGAGACAAC 57.741 50.000 9.46 0.00 0.00 3.32
5465 9328 2.173143 AGTTACCCAAAACCGGAGACAA 59.827 45.455 9.46 0.00 0.00 3.18
5466 9329 1.770061 AGTTACCCAAAACCGGAGACA 59.230 47.619 9.46 0.00 0.00 3.41
5467 9330 2.556144 AGTTACCCAAAACCGGAGAC 57.444 50.000 9.46 0.00 0.00 3.36
5468 9331 3.581265 AAAGTTACCCAAAACCGGAGA 57.419 42.857 9.46 0.00 0.00 3.71
5469 9332 3.304190 CGAAAAGTTACCCAAAACCGGAG 60.304 47.826 9.46 0.00 0.00 4.63
5470 9333 2.617774 CGAAAAGTTACCCAAAACCGGA 59.382 45.455 9.46 0.00 0.00 5.14
5471 9334 2.859419 GCGAAAAGTTACCCAAAACCGG 60.859 50.000 0.00 0.00 0.00 5.28
5472 9335 2.387185 GCGAAAAGTTACCCAAAACCG 58.613 47.619 0.00 0.00 0.00 4.44
5473 9336 2.101082 TGGCGAAAAGTTACCCAAAACC 59.899 45.455 0.00 0.00 0.00 3.27
5474 9337 3.181484 ACTGGCGAAAAGTTACCCAAAAC 60.181 43.478 0.00 0.00 0.00 2.43
5475 9338 3.025262 ACTGGCGAAAAGTTACCCAAAA 58.975 40.909 0.00 0.00 0.00 2.44
5476 9339 2.657143 ACTGGCGAAAAGTTACCCAAA 58.343 42.857 0.00 0.00 0.00 3.28
5477 9340 2.351706 ACTGGCGAAAAGTTACCCAA 57.648 45.000 0.00 0.00 0.00 4.12
5478 9341 2.351706 AACTGGCGAAAAGTTACCCA 57.648 45.000 0.00 0.00 36.11 4.51
5479 9342 3.720949 AAAACTGGCGAAAAGTTACCC 57.279 42.857 0.00 0.00 36.87 3.69
5509 9372 2.855963 CGTAGTAGTGTAAACCGCATGG 59.144 50.000 0.00 0.00 42.84 3.66
5510 9373 3.302434 CACGTAGTAGTGTAAACCGCATG 59.698 47.826 0.00 0.00 41.61 4.06
5511 9374 3.504863 CACGTAGTAGTGTAAACCGCAT 58.495 45.455 0.00 0.00 41.61 4.73
5512 9375 2.351641 CCACGTAGTAGTGTAAACCGCA 60.352 50.000 0.00 0.00 41.61 5.69
5513 9376 2.253603 CCACGTAGTAGTGTAAACCGC 58.746 52.381 0.00 0.00 41.61 5.68
5514 9377 3.559238 ACCACGTAGTAGTGTAAACCG 57.441 47.619 0.00 0.00 41.61 4.44
5515 9378 5.752955 TGAAAACCACGTAGTAGTGTAAACC 59.247 40.000 0.00 0.00 41.61 3.27
5516 9379 6.640137 GTGAAAACCACGTAGTAGTGTAAAC 58.360 40.000 0.00 0.00 41.61 2.01
5517 9380 6.826893 GTGAAAACCACGTAGTAGTGTAAA 57.173 37.500 0.00 0.00 41.61 2.01
5551 9414 9.434420 AGTTCATGAAAAATGAAAAACTGAACA 57.566 25.926 10.35 0.00 41.30 3.18



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.