Multiple sequence alignment - TraesCS5A01G370300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G370300 chr5A 100.000 5833 0 0 1 5833 569801002 569806834 0.000000e+00 10772
1 TraesCS5A01G370300 chr5D 91.531 2279 127 31 2289 4551 450633759 450635987 0.000000e+00 3079
2 TraesCS5A01G370300 chr5D 82.013 1212 93 64 324 1452 450631950 450633119 0.000000e+00 915
3 TraesCS5A01G370300 chr5D 91.515 660 28 7 4532 5184 450636003 450636641 0.000000e+00 883
4 TraesCS5A01G370300 chr5D 84.318 491 44 15 1541 2013 450633140 450633615 3.210000e-122 449
5 TraesCS5A01G370300 chr5D 93.625 251 12 2 5585 5833 450637003 450637251 7.140000e-99 372
6 TraesCS5A01G370300 chr5D 86.154 260 21 11 5208 5459 450636638 450636890 3.470000e-67 267
7 TraesCS5A01G370300 chr5D 90.244 123 12 0 2023 2145 450633595 450633717 1.680000e-35 161
8 TraesCS5A01G370300 chr5B 91.600 1869 99 28 2288 4149 550559404 550561221 0.000000e+00 2529
9 TraesCS5A01G370300 chr5B 88.926 1201 87 28 4280 5459 550561241 550562416 0.000000e+00 1439
10 TraesCS5A01G370300 chr5B 84.456 772 69 32 498 1234 550557484 550558239 0.000000e+00 713
11 TraesCS5A01G370300 chr5B 80.717 669 79 27 1373 2013 550558599 550559245 5.290000e-130 475
12 TraesCS5A01G370300 chr5B 93.401 197 11 1 5636 5832 550562567 550562761 2.060000e-74 291
13 TraesCS5A01G370300 chr2A 94.156 770 30 6 1399 2167 424923979 424923224 0.000000e+00 1158
14 TraesCS5A01G370300 chr2A 97.391 115 2 1 5480 5594 635579953 635580066 1.660000e-45 195
15 TraesCS5A01G370300 chr3A 100.000 109 0 0 5479 5587 707385860 707385968 9.910000e-48 202
16 TraesCS5A01G370300 chr3A 89.000 100 9 2 2200 2297 571179675 571179576 7.940000e-24 122
17 TraesCS5A01G370300 chr3D 100.000 108 0 0 5480 5587 419583003 419583110 3.560000e-47 200
18 TraesCS5A01G370300 chr3D 89.000 100 9 2 2200 2297 433137989 433137890 7.940000e-24 122
19 TraesCS5A01G370300 chr1B 99.099 111 1 0 5478 5588 669891465 669891575 3.560000e-47 200
20 TraesCS5A01G370300 chr7D 98.230 113 2 0 5480 5592 126669698 126669810 1.280000e-46 198
21 TraesCS5A01G370300 chr7D 91.860 86 7 0 2204 2289 119897077 119896992 2.850000e-23 121
22 TraesCS5A01G370300 chr2B 98.230 113 2 0 5479 5591 154146013 154145901 1.280000e-46 198
23 TraesCS5A01G370300 chr2B 96.610 118 4 0 5478 5595 173803275 173803392 4.610000e-46 196
24 TraesCS5A01G370300 chr2B 97.391 115 3 0 5475 5589 182511802 182511916 4.610000e-46 196
25 TraesCS5A01G370300 chr4B 95.868 121 4 1 5480 5599 85349882 85350002 1.660000e-45 195
26 TraesCS5A01G370300 chr4B 91.111 90 7 1 2200 2289 563210521 563210609 2.850000e-23 121
27 TraesCS5A01G370300 chr4D 93.333 90 6 0 2200 2289 450203702 450203791 3.670000e-27 134
28 TraesCS5A01G370300 chr4D 93.103 87 6 0 2204 2290 450203791 450203705 1.710000e-25 128
29 TraesCS5A01G370300 chr4A 92.222 90 7 0 2200 2289 16469412 16469323 1.710000e-25 128
30 TraesCS5A01G370300 chr3B 89.000 100 9 2 2200 2297 565270286 565270187 7.940000e-24 122
31 TraesCS5A01G370300 chr7A 85.714 105 13 1 2200 2302 654796944 654797048 6.180000e-20 110


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G370300 chr5A 569801002 569806834 5832 False 10772.000000 10772 100.000000 1 5833 1 chr5A.!!$F1 5832
1 TraesCS5A01G370300 chr5D 450631950 450637251 5301 False 875.142857 3079 88.485714 324 5833 7 chr5D.!!$F1 5509
2 TraesCS5A01G370300 chr5B 550557484 550562761 5277 False 1089.400000 2529 87.820000 498 5832 5 chr5B.!!$F1 5334
3 TraesCS5A01G370300 chr2A 424923224 424923979 755 True 1158.000000 1158 94.156000 1399 2167 1 chr2A.!!$R1 768

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
580 618 0.392461 GAAATAGCTCCCACGCCACA 60.392 55.000 0.0 0.0 0.0 4.17 F
753 791 0.892063 GTCAGAGACCCAGACCACTC 59.108 60.000 0.0 0.0 0.0 3.51 F
1692 2026 0.532196 GGGTATGGCGGACTACTTGC 60.532 60.000 0.0 0.0 0.0 4.01 F
2466 2821 1.200948 GCAAGAACAATCCTGACTGCC 59.799 52.381 0.0 0.0 0.0 4.85 F
4092 4457 0.538746 TTCCTCCCCGGCTGTTTTTC 60.539 55.000 0.0 0.0 0.0 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1692 2026 0.311790 AACAAAGTGATGCTGGCACG 59.688 50.0 0.00 0.0 41.04 5.34 R
2649 3008 0.675083 TTGGAGCAAACATGGTGCAG 59.325 50.0 21.45 0.6 44.74 4.41 R
2971 3336 1.098050 GTGAGGGCGATGAAAGCAAT 58.902 50.0 0.00 0.0 36.08 3.56 R
4226 4592 0.669619 TGCTACCGTCGTCTTGTCAA 59.330 50.0 0.00 0.0 0.00 3.18 R
4962 5378 0.170116 CAGCACCTCGACTCTGACTC 59.830 60.0 0.00 0.0 0.00 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 9.883142 TTCAGAAAAACAGGTTTGAACATATTT 57.117 25.926 0.00 0.00 32.36 1.40
91 92 9.883142 TCAGAAAAACAGGTTTGAACATATTTT 57.117 25.926 0.00 0.00 32.36 1.82
94 95 9.220635 GAAAAACAGGTTTGAACATATTTTTGC 57.779 29.630 12.95 3.54 32.54 3.68
95 96 7.856145 AAACAGGTTTGAACATATTTTTGCA 57.144 28.000 0.00 0.00 0.00 4.08
96 97 7.856145 AACAGGTTTGAACATATTTTTGCAA 57.144 28.000 0.00 0.00 0.00 4.08
97 98 7.856145 ACAGGTTTGAACATATTTTTGCAAA 57.144 28.000 8.05 8.05 0.00 3.68
98 99 7.693020 ACAGGTTTGAACATATTTTTGCAAAC 58.307 30.769 12.39 0.00 42.40 2.93
99 100 7.335422 ACAGGTTTGAACATATTTTTGCAAACA 59.665 29.630 12.39 5.81 43.95 2.83
100 101 8.180267 CAGGTTTGAACATATTTTTGCAAACAA 58.820 29.630 12.39 9.98 43.95 2.83
101 102 8.734386 AGGTTTGAACATATTTTTGCAAACAAA 58.266 25.926 12.39 12.93 43.95 2.83
102 103 8.793472 GGTTTGAACATATTTTTGCAAACAAAC 58.207 29.630 26.44 26.44 45.29 2.93
103 104 9.553418 GTTTGAACATATTTTTGCAAACAAACT 57.447 25.926 26.77 9.33 45.29 2.66
106 107 8.547069 TGAACATATTTTTGCAAACAAACTAGC 58.453 29.630 12.39 0.05 45.29 3.42
107 108 8.430801 AACATATTTTTGCAAACAAACTAGCA 57.569 26.923 12.39 0.00 45.29 3.49
108 109 8.075593 ACATATTTTTGCAAACAAACTAGCAG 57.924 30.769 12.39 0.00 45.29 4.24
109 110 7.710475 ACATATTTTTGCAAACAAACTAGCAGT 59.290 29.630 12.39 0.00 45.29 4.40
110 111 6.588348 ATTTTTGCAAACAAACTAGCAGTC 57.412 33.333 12.39 0.00 45.29 3.51
111 112 4.710423 TTTGCAAACAAACTAGCAGTCA 57.290 36.364 8.05 0.00 40.84 3.41
112 113 4.916983 TTGCAAACAAACTAGCAGTCAT 57.083 36.364 0.00 0.00 38.35 3.06
113 114 4.916983 TGCAAACAAACTAGCAGTCATT 57.083 36.364 0.00 0.00 32.48 2.57
114 115 4.858935 TGCAAACAAACTAGCAGTCATTC 58.141 39.130 0.00 0.00 32.48 2.67
115 116 4.337836 TGCAAACAAACTAGCAGTCATTCA 59.662 37.500 0.00 0.00 32.48 2.57
116 117 5.163571 TGCAAACAAACTAGCAGTCATTCAA 60.164 36.000 0.00 0.00 32.48 2.69
117 118 5.748152 GCAAACAAACTAGCAGTCATTCAAA 59.252 36.000 0.00 0.00 0.00 2.69
118 119 6.255453 GCAAACAAACTAGCAGTCATTCAAAA 59.745 34.615 0.00 0.00 0.00 2.44
119 120 7.201513 GCAAACAAACTAGCAGTCATTCAAAAA 60.202 33.333 0.00 0.00 0.00 1.94
219 220 9.320352 TGTATATAAGACAAATACGCAATGTGT 57.680 29.630 4.41 4.41 38.86 3.72
223 224 6.735678 AAGACAAATACGCAATGTGTATGA 57.264 33.333 18.72 0.00 36.08 2.15
224 225 6.349973 AGACAAATACGCAATGTGTATGAG 57.650 37.500 18.72 15.81 36.08 2.90
225 226 6.106003 AGACAAATACGCAATGTGTATGAGA 58.894 36.000 18.72 0.00 36.08 3.27
226 227 6.763135 AGACAAATACGCAATGTGTATGAGAT 59.237 34.615 18.72 6.59 36.08 2.75
227 228 6.718388 ACAAATACGCAATGTGTATGAGATG 58.282 36.000 18.72 16.33 38.91 2.90
228 229 6.316140 ACAAATACGCAATGTGTATGAGATGT 59.684 34.615 18.72 16.84 38.91 3.06
229 230 7.494298 ACAAATACGCAATGTGTATGAGATGTA 59.506 33.333 18.72 0.00 38.91 2.29
230 231 8.498358 CAAATACGCAATGTGTATGAGATGTAT 58.502 33.333 18.72 0.00 38.91 2.29
231 232 9.705290 AAATACGCAATGTGTATGAGATGTATA 57.295 29.630 18.72 0.00 38.91 1.47
232 233 9.705290 AATACGCAATGTGTATGAGATGTATAA 57.295 29.630 18.72 0.00 38.91 0.98
233 234 9.875691 ATACGCAATGTGTATGAGATGTATAAT 57.124 29.630 17.51 0.00 37.76 1.28
234 235 8.607441 ACGCAATGTGTATGAGATGTATAATT 57.393 30.769 0.00 0.00 0.00 1.40
235 236 9.705290 ACGCAATGTGTATGAGATGTATAATTA 57.295 29.630 0.00 0.00 0.00 1.40
323 324 9.656323 AGGTATAAGTATGTCTGACCAATAAGA 57.344 33.333 5.17 0.00 30.92 2.10
406 417 8.977412 AGAAATAAACAAGGAGAACCAAAGAAA 58.023 29.630 0.00 0.00 38.94 2.52
413 424 8.712228 ACAAGGAGAACCAAAGAAAGAATAAT 57.288 30.769 0.00 0.00 38.94 1.28
447 458 9.320295 AGAATGATAAAAACCCAAAGATAACCA 57.680 29.630 0.00 0.00 0.00 3.67
453 465 6.405278 AAAACCCAAAGATAACCAGTCAAG 57.595 37.500 0.00 0.00 0.00 3.02
473 485 5.654650 TCAAGCAGTTAAACCTGGAAAAGAA 59.345 36.000 0.00 0.00 32.92 2.52
563 597 0.669318 GTCACACGAATGGGCGAGAA 60.669 55.000 0.00 0.00 34.83 2.87
574 608 0.533085 GGGCGAGAAATAGCTCCCAC 60.533 60.000 0.00 0.00 31.07 4.61
580 618 0.392461 GAAATAGCTCCCACGCCACA 60.392 55.000 0.00 0.00 0.00 4.17
605 643 2.263077 GTGCTCAGGATGACGTGTAAG 58.737 52.381 0.00 0.00 42.56 2.34
616 654 2.642254 CGTGTAAGCCCGAGGTCCA 61.642 63.158 0.00 0.00 0.00 4.02
646 684 1.975407 CGACCCGTCACCCTGTACT 60.975 63.158 0.00 0.00 0.00 2.73
648 686 1.602327 GACCCGTCACCCTGTACTCC 61.602 65.000 0.00 0.00 0.00 3.85
649 687 1.608336 CCCGTCACCCTGTACTCCA 60.608 63.158 0.00 0.00 0.00 3.86
670 708 4.560856 AGTCATCGCTCGCCTCGC 62.561 66.667 0.00 0.00 0.00 5.03
673 711 4.957684 CATCGCTCGCCTCGCCAT 62.958 66.667 0.00 0.00 0.00 4.40
677 715 4.819761 GCTCGCCTCGCCATCACA 62.820 66.667 0.00 0.00 0.00 3.58
678 716 2.125552 CTCGCCTCGCCATCACAA 60.126 61.111 0.00 0.00 0.00 3.33
679 717 2.434185 TCGCCTCGCCATCACAAC 60.434 61.111 0.00 0.00 0.00 3.32
680 718 2.434884 CGCCTCGCCATCACAACT 60.435 61.111 0.00 0.00 0.00 3.16
681 719 1.153647 CGCCTCGCCATCACAACTA 60.154 57.895 0.00 0.00 0.00 2.24
682 720 1.421410 CGCCTCGCCATCACAACTAC 61.421 60.000 0.00 0.00 0.00 2.73
685 723 2.799917 GCCTCGCCATCACAACTACTAG 60.800 54.545 0.00 0.00 0.00 2.57
713 751 3.175240 CGCGACGGAAGAGCACAG 61.175 66.667 0.00 0.00 37.93 3.66
746 784 3.374402 ACCGCGTCAGAGACCCAG 61.374 66.667 4.92 0.00 0.00 4.45
752 790 0.896019 CGTCAGAGACCCAGACCACT 60.896 60.000 0.00 0.00 0.00 4.00
753 791 0.892063 GTCAGAGACCCAGACCACTC 59.108 60.000 0.00 0.00 0.00 3.51
781 846 2.745884 CCACGCCTCCGCAAATCA 60.746 61.111 0.00 0.00 38.22 2.57
782 847 2.331893 CCACGCCTCCGCAAATCAA 61.332 57.895 0.00 0.00 38.22 2.57
927 1001 4.810790 AGCGCATGATTATCACTACTACC 58.189 43.478 11.47 0.00 0.00 3.18
931 1005 5.279006 CGCATGATTATCACTACTACCACCT 60.279 44.000 0.00 0.00 0.00 4.00
972 1046 4.569943 CGGATTAGAGAGAGAGAGAGAGG 58.430 52.174 0.00 0.00 0.00 3.69
976 1052 3.136641 AGAGAGAGAGAGAGAGGGAGT 57.863 52.381 0.00 0.00 0.00 3.85
1235 1328 1.972223 CCTGCTGCTCTTGCTTGCT 60.972 57.895 0.00 0.00 39.01 3.91
1236 1329 1.502640 CTGCTGCTCTTGCTTGCTC 59.497 57.895 0.00 0.00 39.01 4.26
1241 1334 2.437359 CTCTTGCTTGCTCGGGGG 60.437 66.667 0.00 0.00 0.00 5.40
1243 1336 2.262774 CTCTTGCTTGCTCGGGGGAT 62.263 60.000 0.00 0.00 0.00 3.85
1322 1415 2.284921 TGCCACAGAGGGAGAGGG 60.285 66.667 0.00 0.00 38.09 4.30
1413 1727 2.306805 TCTGCTTGGACCACTGAATCAT 59.693 45.455 0.00 0.00 0.00 2.45
1414 1728 3.519107 TCTGCTTGGACCACTGAATCATA 59.481 43.478 0.00 0.00 0.00 2.15
1415 1729 4.164796 TCTGCTTGGACCACTGAATCATAT 59.835 41.667 0.00 0.00 0.00 1.78
1416 1730 4.454678 TGCTTGGACCACTGAATCATATC 58.545 43.478 0.00 0.00 0.00 1.63
1417 1731 3.817647 GCTTGGACCACTGAATCATATCC 59.182 47.826 0.00 0.00 0.00 2.59
1539 1862 2.759560 ATGTTTCCATGCCGCCCC 60.760 61.111 0.00 0.00 0.00 5.80
1569 1895 6.744112 TGTGTAGAATTGGTTGAACAAATCC 58.256 36.000 0.00 0.00 32.07 3.01
1570 1896 6.549364 TGTGTAGAATTGGTTGAACAAATCCT 59.451 34.615 0.00 0.00 32.07 3.24
1571 1897 6.863126 GTGTAGAATTGGTTGAACAAATCCTG 59.137 38.462 0.00 0.00 32.07 3.86
1572 1898 6.549364 TGTAGAATTGGTTGAACAAATCCTGT 59.451 34.615 0.00 0.00 41.27 4.00
1573 1899 5.846203 AGAATTGGTTGAACAAATCCTGTG 58.154 37.500 0.00 0.00 38.67 3.66
1574 1900 5.598005 AGAATTGGTTGAACAAATCCTGTGA 59.402 36.000 0.00 0.00 38.67 3.58
1578 1910 1.890876 TGAACAAATCCTGTGACGGG 58.109 50.000 3.42 3.42 38.67 5.28
1624 1956 3.728845 AGACTACAACAATTGCTCGTGT 58.271 40.909 5.05 7.53 0.00 4.49
1630 1964 6.910433 ACTACAACAATTGCTCGTGTTTTTAG 59.090 34.615 5.05 0.51 35.81 1.85
1684 2018 2.611172 TGGTTGGGGTATGGCGGA 60.611 61.111 0.00 0.00 0.00 5.54
1692 2026 0.532196 GGGTATGGCGGACTACTTGC 60.532 60.000 0.00 0.00 0.00 4.01
1872 2222 9.671279 TCTGTGATCATATTTGAAATGTACTGT 57.329 29.630 0.00 0.00 34.96 3.55
1965 2318 8.338259 GTCTGTTTATGTGCTTGTATAGAATGG 58.662 37.037 0.00 0.00 0.00 3.16
1976 2329 8.316946 TGCTTGTATAGAATGGGATATCTGAAG 58.683 37.037 2.05 0.00 0.00 3.02
2102 2457 7.213678 CAGCTTAATGTTGGGGTTAAAGAAAA 58.786 34.615 0.00 0.00 0.00 2.29
2103 2458 7.713073 CAGCTTAATGTTGGGGTTAAAGAAAAA 59.287 33.333 0.00 0.00 0.00 1.94
2170 2525 7.899973 ACCTACTAGAAGTCGGTTTCATTTTA 58.100 34.615 0.00 0.00 40.93 1.52
2209 2564 9.461312 TGTTGCTTATATTTGTCAAATACTCCT 57.539 29.630 18.14 7.15 36.27 3.69
2212 2567 9.905713 TGCTTATATTTGTCAAATACTCCTTCT 57.094 29.630 18.14 5.61 36.27 2.85
2217 2572 6.877611 TTTGTCAAATACTCCTTCTGTTCC 57.122 37.500 0.00 0.00 0.00 3.62
2218 2573 4.566004 TGTCAAATACTCCTTCTGTTCCG 58.434 43.478 0.00 0.00 0.00 4.30
2219 2574 4.282449 TGTCAAATACTCCTTCTGTTCCGA 59.718 41.667 0.00 0.00 0.00 4.55
2220 2575 5.221561 TGTCAAATACTCCTTCTGTTCCGAA 60.222 40.000 0.00 0.00 0.00 4.30
2221 2576 5.348997 GTCAAATACTCCTTCTGTTCCGAAG 59.651 44.000 0.00 0.00 40.01 3.79
2222 2577 5.011738 TCAAATACTCCTTCTGTTCCGAAGT 59.988 40.000 0.00 0.00 38.95 3.01
2223 2578 6.209986 TCAAATACTCCTTCTGTTCCGAAGTA 59.790 38.462 0.00 0.00 38.95 2.24
2224 2579 6.600882 AATACTCCTTCTGTTCCGAAGTAA 57.399 37.500 0.00 0.00 38.95 2.24
2225 2580 4.522722 ACTCCTTCTGTTCCGAAGTAAG 57.477 45.455 0.00 0.00 38.95 2.34
2226 2581 3.896272 ACTCCTTCTGTTCCGAAGTAAGT 59.104 43.478 0.00 0.00 38.95 2.24
2227 2582 4.238514 CTCCTTCTGTTCCGAAGTAAGTG 58.761 47.826 0.00 0.00 38.95 3.16
2228 2583 3.640029 TCCTTCTGTTCCGAAGTAAGTGT 59.360 43.478 0.00 0.00 38.95 3.55
2229 2584 3.988517 CCTTCTGTTCCGAAGTAAGTGTC 59.011 47.826 0.00 0.00 38.95 3.67
2230 2585 3.278367 TCTGTTCCGAAGTAAGTGTCG 57.722 47.619 0.00 0.00 37.01 4.35
2231 2586 2.620115 TCTGTTCCGAAGTAAGTGTCGT 59.380 45.455 0.00 0.00 35.48 4.34
2232 2587 2.724690 CTGTTCCGAAGTAAGTGTCGTG 59.275 50.000 0.00 0.00 35.48 4.35
2233 2588 2.056577 GTTCCGAAGTAAGTGTCGTGG 58.943 52.381 0.00 0.00 35.48 4.94
2234 2589 1.321474 TCCGAAGTAAGTGTCGTGGT 58.679 50.000 0.00 0.00 35.48 4.16
2235 2590 1.682854 TCCGAAGTAAGTGTCGTGGTT 59.317 47.619 0.00 0.00 35.48 3.67
2236 2591 2.101249 TCCGAAGTAAGTGTCGTGGTTT 59.899 45.455 0.00 0.00 35.48 3.27
2237 2592 2.867975 CCGAAGTAAGTGTCGTGGTTTT 59.132 45.455 0.00 0.00 35.48 2.43
2238 2593 4.050553 CCGAAGTAAGTGTCGTGGTTTTA 58.949 43.478 0.00 0.00 35.48 1.52
2239 2594 4.149396 CCGAAGTAAGTGTCGTGGTTTTAG 59.851 45.833 0.00 0.00 35.48 1.85
2240 2595 4.741676 CGAAGTAAGTGTCGTGGTTTTAGT 59.258 41.667 0.00 0.00 32.61 2.24
2241 2596 5.232838 CGAAGTAAGTGTCGTGGTTTTAGTT 59.767 40.000 0.00 0.00 32.61 2.24
2242 2597 6.560983 CGAAGTAAGTGTCGTGGTTTTAGTTC 60.561 42.308 0.00 0.00 33.48 3.01
2243 2598 5.663456 AGTAAGTGTCGTGGTTTTAGTTCA 58.337 37.500 0.00 0.00 0.00 3.18
2244 2599 6.108015 AGTAAGTGTCGTGGTTTTAGTTCAA 58.892 36.000 0.00 0.00 0.00 2.69
2245 2600 5.883503 AAGTGTCGTGGTTTTAGTTCAAA 57.116 34.783 0.00 0.00 0.00 2.69
2246 2601 6.445357 AAGTGTCGTGGTTTTAGTTCAAAT 57.555 33.333 0.00 0.00 0.00 2.32
2247 2602 6.445357 AGTGTCGTGGTTTTAGTTCAAATT 57.555 33.333 0.00 0.00 0.00 1.82
2248 2603 6.859017 AGTGTCGTGGTTTTAGTTCAAATTT 58.141 32.000 0.00 0.00 0.00 1.82
2249 2604 6.750039 AGTGTCGTGGTTTTAGTTCAAATTTG 59.250 34.615 12.15 12.15 0.00 2.32
2250 2605 6.748198 GTGTCGTGGTTTTAGTTCAAATTTGA 59.252 34.615 16.91 16.91 34.92 2.69
2251 2606 7.273815 GTGTCGTGGTTTTAGTTCAAATTTGAA 59.726 33.333 26.01 26.01 44.31 2.69
2266 2621 8.641499 TCAAATTTGAACTAAAACCATGACAC 57.359 30.769 18.45 0.00 33.55 3.67
2267 2622 8.474025 TCAAATTTGAACTAAAACCATGACACT 58.526 29.630 18.45 0.00 33.55 3.55
2268 2623 9.097257 CAAATTTGAACTAAAACCATGACACTT 57.903 29.630 13.08 0.00 0.00 3.16
2274 2629 9.959749 TGAACTAAAACCATGACACTTATTTTC 57.040 29.630 0.00 0.00 0.00 2.29
2275 2630 9.113876 GAACTAAAACCATGACACTTATTTTCG 57.886 33.333 0.00 0.00 0.00 3.46
2276 2631 8.385898 ACTAAAACCATGACACTTATTTTCGA 57.614 30.769 0.00 0.00 0.00 3.71
2277 2632 8.842280 ACTAAAACCATGACACTTATTTTCGAA 58.158 29.630 0.00 0.00 0.00 3.71
2278 2633 7.924103 AAAACCATGACACTTATTTTCGAAC 57.076 32.000 0.00 0.00 0.00 3.95
2279 2634 5.277601 ACCATGACACTTATTTTCGAACG 57.722 39.130 0.00 0.00 0.00 3.95
2280 2635 4.153475 ACCATGACACTTATTTTCGAACGG 59.847 41.667 0.00 0.00 0.00 4.44
2281 2636 4.390603 CCATGACACTTATTTTCGAACGGA 59.609 41.667 0.00 0.00 0.00 4.69
2282 2637 5.445939 CCATGACACTTATTTTCGAACGGAG 60.446 44.000 0.00 0.00 0.00 4.63
2283 2638 3.991773 TGACACTTATTTTCGAACGGAGG 59.008 43.478 0.00 0.00 0.00 4.30
2284 2639 3.332034 ACACTTATTTTCGAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
2285 2640 3.007182 ACACTTATTTTCGAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
2286 2641 3.617263 CACTTATTTTCGAACGGAGGGAG 59.383 47.826 0.00 0.00 0.00 4.30
2287 2642 3.260128 ACTTATTTTCGAACGGAGGGAGT 59.740 43.478 0.00 0.00 0.00 3.85
2288 2643 4.463891 ACTTATTTTCGAACGGAGGGAGTA 59.536 41.667 0.00 0.00 0.00 2.59
2298 2653 4.939052 ACGGAGGGAGTATATTCAGTTG 57.061 45.455 0.00 0.00 0.00 3.16
2304 2659 7.147897 CGGAGGGAGTATATTCAGTTGCATATA 60.148 40.741 0.00 0.00 0.00 0.86
2347 2702 4.483950 CCCCTCCATCTGACTTATAGACA 58.516 47.826 0.00 0.00 0.00 3.41
2401 2756 6.506500 AGATCACAATCTGACCACATTTTC 57.493 37.500 0.00 0.00 40.84 2.29
2404 2759 5.301555 TCACAATCTGACCACATTTTCGTA 58.698 37.500 0.00 0.00 0.00 3.43
2452 2807 6.484643 GCTATTATCAGACAAGATGGCAAGAA 59.515 38.462 0.00 0.00 0.00 2.52
2466 2821 1.200948 GCAAGAACAATCCTGACTGCC 59.799 52.381 0.00 0.00 0.00 4.85
2467 2822 1.815003 CAAGAACAATCCTGACTGCCC 59.185 52.381 0.00 0.00 0.00 5.36
2484 2839 1.211949 GCCCACTTGCATTAGTCCCTA 59.788 52.381 0.00 0.00 0.00 3.53
2493 2848 7.661437 CACTTGCATTAGTCCCTATATTTGCTA 59.339 37.037 0.00 0.00 0.00 3.49
2494 2849 8.386264 ACTTGCATTAGTCCCTATATTTGCTAT 58.614 33.333 0.00 0.00 0.00 2.97
2495 2850 8.792830 TTGCATTAGTCCCTATATTTGCTATC 57.207 34.615 0.00 0.00 0.00 2.08
2598 2957 7.619965 TGGAATAACTTTTGGGGAATCATTTC 58.380 34.615 0.00 0.00 0.00 2.17
2616 2975 9.799106 AATCATTTCCAAGGTATCACTATAAGG 57.201 33.333 0.00 0.00 0.00 2.69
2638 2997 8.457238 AAGGATGAGTTTATTTCTTCATAGCC 57.543 34.615 0.00 0.00 0.00 3.93
2649 3008 7.948278 ATTTCTTCATAGCCTGTACGATTAC 57.052 36.000 0.00 0.00 0.00 1.89
2678 3037 7.765360 CACCATGTTTGCTCCAACATAATTAAT 59.235 33.333 8.56 0.00 0.00 1.40
2752 3116 2.417719 ACCATCTCGAGCTTTGAACAC 58.582 47.619 7.81 0.00 0.00 3.32
2754 3118 2.807967 CCATCTCGAGCTTTGAACACAA 59.192 45.455 7.81 0.00 0.00 3.33
2757 3121 3.266636 TCTCGAGCTTTGAACACAAACA 58.733 40.909 7.81 0.00 31.50 2.83
2758 3122 3.063452 TCTCGAGCTTTGAACACAAACAC 59.937 43.478 7.81 0.00 31.50 3.32
2759 3123 2.744741 TCGAGCTTTGAACACAAACACA 59.255 40.909 0.00 0.00 31.50 3.72
2760 3124 3.376859 TCGAGCTTTGAACACAAACACAT 59.623 39.130 0.00 0.00 31.50 3.21
2761 3125 4.572795 TCGAGCTTTGAACACAAACACATA 59.427 37.500 0.00 0.00 31.50 2.29
2762 3126 4.670621 CGAGCTTTGAACACAAACACATAC 59.329 41.667 0.00 0.00 31.50 2.39
2763 3127 5.574891 AGCTTTGAACACAAACACATACA 57.425 34.783 0.00 0.00 31.50 2.29
2764 3128 5.960113 AGCTTTGAACACAAACACATACAA 58.040 33.333 0.00 0.00 31.50 2.41
2765 3129 6.393990 AGCTTTGAACACAAACACATACAAA 58.606 32.000 0.00 0.00 31.50 2.83
2836 3201 6.655003 CACTTCACTAATGTTCCAACCACTAT 59.345 38.462 0.00 0.00 0.00 2.12
2869 3234 4.456911 TGCCACTTGAAATAGAAGAGCAAG 59.543 41.667 0.00 0.00 41.15 4.01
2919 3284 2.594962 CCGTGACAGTCGTGGTTGC 61.595 63.158 0.00 0.00 0.00 4.17
2971 3336 3.421919 TTCTGTTCATCATGCACCTCA 57.578 42.857 0.00 0.00 0.00 3.86
3210 3575 2.492484 AGTCATACTCCTTGTCGGTGAC 59.508 50.000 0.00 0.00 36.65 3.67
3480 3845 5.183904 GGATTTCCATATTGTCTATGTGGCC 59.816 44.000 0.00 0.00 43.31 5.36
3540 3905 2.734492 GCGTTACTTCGTCTATGTGGCT 60.734 50.000 0.00 0.00 0.00 4.75
3781 4146 2.766263 TGCCTGACTGTATCGGAGAAAT 59.234 45.455 0.00 0.00 43.58 2.17
3945 4310 0.603975 GCTTCCTTTCGGCTGTCACT 60.604 55.000 0.00 0.00 0.00 3.41
4067 4432 8.647796 TCTCATCGGTTATTACATGGTATTCTT 58.352 33.333 0.00 0.00 0.00 2.52
4079 4444 9.847224 TTACATGGTATTCTTCTTAATTCCTCC 57.153 33.333 0.00 0.00 30.04 4.30
4092 4457 0.538746 TTCCTCCCCGGCTGTTTTTC 60.539 55.000 0.00 0.00 0.00 2.29
4093 4458 1.977009 CCTCCCCGGCTGTTTTTCC 60.977 63.158 0.00 0.00 0.00 3.13
4094 4459 1.977009 CTCCCCGGCTGTTTTTCCC 60.977 63.158 0.00 0.00 0.00 3.97
4096 4461 2.275380 CCCCGGCTGTTTTTCCCTG 61.275 63.158 0.00 0.00 0.00 4.45
4098 4463 1.659794 CCGGCTGTTTTTCCCTGTG 59.340 57.895 0.00 0.00 0.00 3.66
4099 4464 1.106944 CCGGCTGTTTTTCCCTGTGT 61.107 55.000 0.00 0.00 0.00 3.72
4101 4466 1.136110 CGGCTGTTTTTCCCTGTGTTT 59.864 47.619 0.00 0.00 0.00 2.83
4102 4467 2.359531 CGGCTGTTTTTCCCTGTGTTTA 59.640 45.455 0.00 0.00 0.00 2.01
4201 4567 3.307059 GCAGACTGTCTATTGGTGAACCT 60.307 47.826 10.47 0.00 36.82 3.50
4212 4578 4.399004 TTGGTGAACCTGGTTGAATTTG 57.601 40.909 18.42 0.00 36.82 2.32
4215 4581 4.956700 TGGTGAACCTGGTTGAATTTGTTA 59.043 37.500 18.42 0.00 36.82 2.41
4238 4604 6.952935 ATAATCTTCTGTTGACAAGACGAC 57.047 37.500 0.00 0.00 31.42 4.34
4240 4606 1.787155 CTTCTGTTGACAAGACGACGG 59.213 52.381 0.00 0.00 33.26 4.79
4243 4609 2.031420 TCTGTTGACAAGACGACGGTAG 60.031 50.000 0.00 0.00 33.60 3.18
4258 4624 0.034059 GGTAGCACACTGTCTGCACT 59.966 55.000 10.62 0.00 37.08 4.40
4274 4640 7.313646 TGTCTGCACTAGTAAAACTGATAGAC 58.686 38.462 0.00 0.00 0.00 2.59
4306 4672 7.690952 TGGTGTTTGTTTACAAAGAAGTAGT 57.309 32.000 8.22 0.00 45.36 2.73
4307 4673 7.531716 TGGTGTTTGTTTACAAAGAAGTAGTG 58.468 34.615 8.22 0.00 45.36 2.74
4334 4700 6.220726 ACCTGTTTAGTTCAACATTTTGCT 57.779 33.333 0.00 0.00 36.08 3.91
4336 4702 6.534793 ACCTGTTTAGTTCAACATTTTGCTTG 59.465 34.615 0.00 0.00 36.08 4.01
4338 4704 5.871524 TGTTTAGTTCAACATTTTGCTTGCA 59.128 32.000 0.00 0.00 31.48 4.08
4341 4707 7.636259 TTAGTTCAACATTTTGCTTGCATAC 57.364 32.000 0.00 0.00 32.17 2.39
4342 4708 4.990426 AGTTCAACATTTTGCTTGCATACC 59.010 37.500 0.00 0.00 32.17 2.73
4343 4709 4.870123 TCAACATTTTGCTTGCATACCT 57.130 36.364 0.00 0.00 32.17 3.08
4344 4710 4.558178 TCAACATTTTGCTTGCATACCTG 58.442 39.130 0.00 0.00 32.17 4.00
4385 4751 1.003118 AGTTGCGTCCATAAGCCTCAA 59.997 47.619 0.00 0.00 0.00 3.02
4439 4805 6.757897 TGGATTTGACTTTACATAGCCTTG 57.242 37.500 0.00 0.00 30.86 3.61
4440 4806 5.652014 TGGATTTGACTTTACATAGCCTTGG 59.348 40.000 0.00 0.00 30.86 3.61
4441 4807 5.652452 GGATTTGACTTTACATAGCCTTGGT 59.348 40.000 0.00 0.00 0.00 3.67
4442 4808 5.957842 TTTGACTTTACATAGCCTTGGTG 57.042 39.130 0.00 0.00 0.00 4.17
4443 4809 4.901197 TGACTTTACATAGCCTTGGTGA 57.099 40.909 0.00 0.00 0.00 4.02
4446 4812 6.245408 TGACTTTACATAGCCTTGGTGAAAT 58.755 36.000 0.00 0.00 0.00 2.17
4474 4850 6.990349 CACCTTTCCACTTTTGTAGTTCTAGA 59.010 38.462 0.00 0.00 33.85 2.43
4483 4859 8.778358 CACTTTTGTAGTTCTAGATGCTTCTTT 58.222 33.333 7.51 0.00 33.85 2.52
4489 4865 9.809096 TGTAGTTCTAGATGCTTCTTTTATCAG 57.191 33.333 7.51 0.00 33.17 2.90
4583 4994 8.840200 ACTGAAAAGGGAGAGATACTGTTATA 57.160 34.615 0.00 0.00 0.00 0.98
4610 5021 0.739813 CGAAAAGGGTAGCGGTCCAG 60.740 60.000 0.00 0.00 0.00 3.86
4616 5027 1.227380 GGTAGCGGTCCAGCATCAG 60.227 63.158 8.15 0.00 40.15 2.90
4621 5032 0.940126 GCGGTCCAGCATCAGTTATG 59.060 55.000 1.46 0.00 38.74 1.90
4643 5058 4.081642 TGAAGTGTAGATGTCCCTTACTGC 60.082 45.833 0.00 0.00 0.00 4.40
4718 5133 1.102809 GGATGATGATTGCGTGGCCA 61.103 55.000 0.00 0.00 0.00 5.36
4733 5148 4.688419 CCACAGGCTTGCGTTGCG 62.688 66.667 0.00 0.00 0.00 4.85
4833 5248 2.748268 GCACTAGCTGCAGACTGAC 58.252 57.895 20.43 0.00 46.29 3.51
4843 5258 0.735632 GCAGACTGACCTCTTGCTCG 60.736 60.000 6.65 0.00 0.00 5.03
4850 5265 2.182030 CCTCTTGCTCGTCGTCCC 59.818 66.667 0.00 0.00 0.00 4.46
4851 5266 2.636412 CCTCTTGCTCGTCGTCCCA 61.636 63.158 0.00 0.00 0.00 4.37
4899 5314 8.982091 AGATTCTTCAGATCACATTCATGATT 57.018 30.769 0.00 0.00 39.48 2.57
4931 5347 9.635520 ATTCTTCAATTGATTTAGTCAGCTTTG 57.364 29.630 9.40 0.00 38.29 2.77
4943 5359 5.939764 AGTCAGCTTTGTGATACCTGATA 57.060 39.130 0.00 0.00 35.30 2.15
4944 5360 6.491714 AGTCAGCTTTGTGATACCTGATAT 57.508 37.500 0.00 0.00 35.30 1.63
4962 5378 8.147058 ACCTGATATACTTAGAAGCAAGACATG 58.853 37.037 0.00 0.00 0.00 3.21
5099 5515 4.410555 GGGGTCAGTGAAGGAGATTAGATT 59.589 45.833 0.00 0.00 0.00 2.40
5115 5531 8.039603 AGATTAGATTATCTGAGACAGTAGCG 57.960 38.462 4.78 0.00 33.68 4.26
5116 5532 7.663905 AGATTAGATTATCTGAGACAGTAGCGT 59.336 37.037 4.78 0.00 33.68 5.07
5117 5533 5.431420 AGATTATCTGAGACAGTAGCGTG 57.569 43.478 0.00 0.00 32.61 5.34
5118 5534 3.422417 TTATCTGAGACAGTAGCGTGC 57.578 47.619 0.00 0.00 32.61 5.34
5119 5535 1.468985 ATCTGAGACAGTAGCGTGCT 58.531 50.000 0.00 0.00 32.61 4.40
5120 5536 0.523519 TCTGAGACAGTAGCGTGCTG 59.476 55.000 4.25 4.16 39.67 4.41
5122 5538 0.039165 TGAGACAGTAGCGTGCTGTG 60.039 55.000 13.87 4.65 45.99 3.66
5155 5571 3.009033 TGCAGCTGTACCTGTAAAGGAAT 59.991 43.478 16.64 0.00 35.28 3.01
5184 5600 8.212430 TTGTGCATGGAACACATTTACAGAATG 61.212 37.037 5.61 0.00 46.72 2.67
5191 5607 7.094248 TGGAACACATTTACAGAATGGAAGATG 60.094 37.037 4.06 0.00 42.04 2.90
5192 5608 7.094205 GGAACACATTTACAGAATGGAAGATGT 60.094 37.037 4.06 0.00 42.04 3.06
5205 5621 2.621668 GGAAGATGTTCCCTTTCCTGGG 60.622 54.545 10.58 0.00 46.11 4.45
5221 5637 1.000396 GGGTGAATTGCTGCCTCCT 60.000 57.895 0.00 0.00 0.00 3.69
5223 5639 1.133668 GGGTGAATTGCTGCCTCCTAT 60.134 52.381 0.00 0.00 0.00 2.57
5237 5653 1.137872 CTCCTATGGACAGGTGCAGTC 59.862 57.143 0.00 0.00 36.99 3.51
5275 5691 5.363580 TCAAAATTCAGCCCTTTTCTTGTCT 59.636 36.000 0.00 0.00 0.00 3.41
5287 5703 8.978539 GCCCTTTTCTTGTCTTTAAAAATGTAG 58.021 33.333 0.00 0.00 0.00 2.74
5295 5711 9.793245 CTTGTCTTTAAAAATGTAGACTGTACG 57.207 33.333 0.00 0.00 38.23 3.67
5296 5712 7.790000 TGTCTTTAAAAATGTAGACTGTACGC 58.210 34.615 0.00 0.00 38.23 4.42
5305 5721 6.576662 ATGTAGACTGTACGCATATAGCTT 57.423 37.500 0.00 0.00 42.61 3.74
5315 5731 7.667557 TGTACGCATATAGCTTAAAGAGGATT 58.332 34.615 0.00 0.00 42.61 3.01
5395 5813 5.564768 CGACAAATTACGATTGCCACAATA 58.435 37.500 0.00 0.00 0.00 1.90
5400 5818 7.701924 ACAAATTACGATTGCCACAATAATGAG 59.298 33.333 0.00 0.00 0.00 2.90
5402 5820 2.951642 ACGATTGCCACAATAATGAGGG 59.048 45.455 0.00 0.00 37.72 4.30
5410 5828 3.225104 CACAATAATGAGGGGTCATGGG 58.775 50.000 0.00 0.00 0.00 4.00
5411 5829 2.177669 ACAATAATGAGGGGTCATGGGG 59.822 50.000 0.00 0.00 0.00 4.96
5412 5830 2.177669 CAATAATGAGGGGTCATGGGGT 59.822 50.000 0.00 0.00 0.00 4.95
5413 5831 1.994399 TAATGAGGGGTCATGGGGTT 58.006 50.000 0.00 0.00 0.00 4.11
5414 5832 0.631212 AATGAGGGGTCATGGGGTTC 59.369 55.000 0.00 0.00 0.00 3.62
5416 5834 1.207488 TGAGGGGTCATGGGGTTCTG 61.207 60.000 0.00 0.00 0.00 3.02
5418 5836 2.616458 GGGGTCATGGGGTTCTGCT 61.616 63.158 0.00 0.00 0.00 4.24
5419 5837 1.077429 GGGTCATGGGGTTCTGCTC 60.077 63.158 0.00 0.00 0.00 4.26
5420 5838 1.566298 GGGTCATGGGGTTCTGCTCT 61.566 60.000 0.00 0.00 0.00 4.09
5424 5842 3.335356 ATGGGGTTCTGCTCTGGCG 62.335 63.158 0.00 0.00 42.25 5.69
5425 5843 4.785453 GGGGTTCTGCTCTGGCGG 62.785 72.222 0.00 0.00 45.61 6.13
5427 5845 4.704833 GGTTCTGCTCTGGCGGCA 62.705 66.667 12.58 12.58 44.02 5.69
5463 5997 0.909623 ACCCTGTGACCTTATTCCGG 59.090 55.000 0.00 0.00 0.00 5.14
5483 6017 4.740235 GCATCCAGCGGTCTACTC 57.260 61.111 0.00 0.00 0.00 2.59
5484 6018 1.068250 GCATCCAGCGGTCTACTCC 59.932 63.158 0.00 0.00 0.00 3.85
5485 6019 1.742768 CATCCAGCGGTCTACTCCC 59.257 63.158 0.00 0.00 0.00 4.30
5486 6020 0.757188 CATCCAGCGGTCTACTCCCT 60.757 60.000 0.00 0.00 0.00 4.20
5487 6021 0.468400 ATCCAGCGGTCTACTCCCTC 60.468 60.000 0.00 0.00 0.00 4.30
5488 6022 2.128507 CCAGCGGTCTACTCCCTCC 61.129 68.421 0.00 0.00 0.00 4.30
5489 6023 2.124236 AGCGGTCTACTCCCTCCG 60.124 66.667 0.00 0.00 44.86 4.63
5490 6024 2.439883 GCGGTCTACTCCCTCCGT 60.440 66.667 0.00 0.00 44.07 4.69
5491 6025 2.050934 GCGGTCTACTCCCTCCGTT 61.051 63.158 0.00 0.00 44.07 4.44
5492 6026 2.002509 GCGGTCTACTCCCTCCGTTC 62.003 65.000 0.00 0.00 44.07 3.95
5493 6027 1.712977 CGGTCTACTCCCTCCGTTCG 61.713 65.000 0.00 0.00 38.45 3.95
5494 6028 1.382692 GGTCTACTCCCTCCGTTCGG 61.383 65.000 4.74 4.74 0.00 4.30
5495 6029 0.393537 GTCTACTCCCTCCGTTCGGA 60.394 60.000 13.34 13.34 0.00 4.55
5496 6030 0.329261 TCTACTCCCTCCGTTCGGAA 59.671 55.000 14.79 0.04 33.41 4.30
5497 6031 1.064166 TCTACTCCCTCCGTTCGGAAT 60.064 52.381 14.79 2.09 33.41 3.01
5498 6032 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
5499 6033 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
5500 6034 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
5501 6035 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
5502 6036 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
5503 6037 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
5504 6038 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
5505 6039 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
5506 6040 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
5507 6041 2.030007 TCCGTTCGGAATTACTTGTCGT 60.030 45.455 11.66 0.00 0.00 4.34
5508 6042 3.190327 TCCGTTCGGAATTACTTGTCGTA 59.810 43.478 11.66 0.00 0.00 3.43
5509 6043 3.545078 CCGTTCGGAATTACTTGTCGTAG 59.455 47.826 5.19 0.00 0.00 3.51
5510 6044 4.406069 CGTTCGGAATTACTTGTCGTAGA 58.594 43.478 0.00 0.00 0.00 2.59
5511 6045 4.853196 CGTTCGGAATTACTTGTCGTAGAA 59.147 41.667 0.00 0.00 39.69 2.10
5512 6046 5.343058 CGTTCGGAATTACTTGTCGTAGAAA 59.657 40.000 0.00 0.00 39.69 2.52
5513 6047 6.034256 CGTTCGGAATTACTTGTCGTAGAAAT 59.966 38.462 0.00 0.00 39.69 2.17
5514 6048 6.880822 TCGGAATTACTTGTCGTAGAAATG 57.119 37.500 0.00 0.00 39.69 2.32
5515 6049 5.808540 TCGGAATTACTTGTCGTAGAAATGG 59.191 40.000 0.00 0.00 39.69 3.16
5516 6050 5.808540 CGGAATTACTTGTCGTAGAAATGGA 59.191 40.000 0.00 0.00 39.69 3.41
5517 6051 6.479001 CGGAATTACTTGTCGTAGAAATGGAT 59.521 38.462 0.00 0.00 39.69 3.41
5518 6052 7.516785 CGGAATTACTTGTCGTAGAAATGGATG 60.517 40.741 0.00 0.00 39.69 3.51
5519 6053 7.280205 GGAATTACTTGTCGTAGAAATGGATGT 59.720 37.037 0.00 0.00 39.69 3.06
5520 6054 9.309516 GAATTACTTGTCGTAGAAATGGATGTA 57.690 33.333 0.00 0.00 39.69 2.29
5521 6055 9.832445 AATTACTTGTCGTAGAAATGGATGTAT 57.168 29.630 0.00 0.00 39.69 2.29
5522 6056 8.867112 TTACTTGTCGTAGAAATGGATGTATC 57.133 34.615 0.00 0.00 39.69 2.24
5523 6057 7.113658 ACTTGTCGTAGAAATGGATGTATCT 57.886 36.000 0.00 0.00 39.69 1.98
5524 6058 8.234136 ACTTGTCGTAGAAATGGATGTATCTA 57.766 34.615 0.00 0.00 39.69 1.98
5525 6059 8.353684 ACTTGTCGTAGAAATGGATGTATCTAG 58.646 37.037 0.00 0.00 39.69 2.43
5526 6060 8.459911 TTGTCGTAGAAATGGATGTATCTAGA 57.540 34.615 0.00 0.00 39.69 2.43
5527 6061 7.872881 TGTCGTAGAAATGGATGTATCTAGAC 58.127 38.462 0.00 0.00 39.69 2.59
5528 6062 7.016466 GTCGTAGAAATGGATGTATCTAGACG 58.984 42.308 0.00 0.00 39.69 4.18
5529 6063 6.709397 TCGTAGAAATGGATGTATCTAGACGT 59.291 38.462 0.00 0.00 0.00 4.34
5530 6064 7.874528 TCGTAGAAATGGATGTATCTAGACGTA 59.125 37.037 0.00 0.00 0.00 3.57
5531 6065 8.666573 CGTAGAAATGGATGTATCTAGACGTAT 58.333 37.037 0.00 0.00 0.00 3.06
5557 6091 9.542462 TTTTAGTTCTAGATACATCCATTTCCG 57.458 33.333 0.00 0.00 0.00 4.30
5558 6092 6.978674 AGTTCTAGATACATCCATTTCCGA 57.021 37.500 0.00 0.00 0.00 4.55
5559 6093 6.987386 AGTTCTAGATACATCCATTTCCGAG 58.013 40.000 0.00 0.00 0.00 4.63
5560 6094 6.778069 AGTTCTAGATACATCCATTTCCGAGA 59.222 38.462 0.00 0.00 0.00 4.04
5561 6095 6.576662 TCTAGATACATCCATTTCCGAGAC 57.423 41.667 0.00 0.00 0.00 3.36
5562 6096 6.068670 TCTAGATACATCCATTTCCGAGACA 58.931 40.000 0.00 0.00 0.00 3.41
5563 6097 5.614324 AGATACATCCATTTCCGAGACAA 57.386 39.130 0.00 0.00 0.00 3.18
5564 6098 5.605534 AGATACATCCATTTCCGAGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
5565 6099 3.703001 ACATCCATTTCCGAGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
5566 6100 4.819105 ACATCCATTTCCGAGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
5567 6101 5.160607 ACATCCATTTCCGAGACAAGTAA 57.839 39.130 0.00 0.00 0.00 2.24
5568 6102 5.745227 ACATCCATTTCCGAGACAAGTAAT 58.255 37.500 0.00 0.00 0.00 1.89
5569 6103 6.180472 ACATCCATTTCCGAGACAAGTAATT 58.820 36.000 0.00 0.00 0.00 1.40
5570 6104 6.316390 ACATCCATTTCCGAGACAAGTAATTC 59.684 38.462 0.00 0.00 0.00 2.17
5571 6105 5.183228 TCCATTTCCGAGACAAGTAATTCC 58.817 41.667 0.00 0.00 0.00 3.01
5572 6106 4.034048 CCATTTCCGAGACAAGTAATTCCG 59.966 45.833 0.00 0.00 0.00 4.30
5573 6107 4.524316 TTTCCGAGACAAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
5574 6108 4.524316 TTCCGAGACAAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
5575 6109 3.841643 TCCGAGACAAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
5576 6110 2.597305 CCGAGACAAGTAATTCCGAACG 59.403 50.000 0.00 0.00 0.00 3.95
5577 6111 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
5578 6112 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
5579 6113 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
5580 6114 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
5581 6115 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
5582 6116 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
5583 6117 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
5599 6133 5.570034 CGGAGGGAGTAGGTTTGTTCAATTA 60.570 44.000 0.00 0.00 0.00 1.40
5615 6149 7.479980 TGTTCAATTAGGATTTTTGGCTATCG 58.520 34.615 0.00 0.00 0.00 2.92
5624 6158 0.742990 TTTGGCTATCGTGGCTTCGG 60.743 55.000 3.35 0.00 0.00 4.30
5629 6163 0.596083 CTATCGTGGCTTCGGCTCTG 60.596 60.000 3.35 0.00 41.44 3.35
5666 6202 5.209240 GTTTCTCTAGATCATCCTTCGACG 58.791 45.833 0.00 0.00 0.00 5.12
5682 6218 2.528688 TCGACGCGAAATAGTTTGATCG 59.471 45.455 15.93 7.11 38.28 3.69
5683 6219 2.346376 CGACGCGAAATAGTTTGATCGG 60.346 50.000 15.93 0.00 35.91 4.18
5720 6256 0.109342 CCTCTGCTCTTGGTGTTGGT 59.891 55.000 0.00 0.00 0.00 3.67
5726 6262 2.224523 TGCTCTTGGTGTTGGTTCTAGG 60.225 50.000 0.00 0.00 0.00 3.02
5798 6334 1.003839 GTCATGGCGTCAAGGTCCA 60.004 57.895 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 9.883142 AAATATGTTCAAACCTGTTTTTCTGAA 57.117 25.926 0.00 0.00 0.00 3.02
65 66 9.883142 AAAATATGTTCAAACCTGTTTTTCTGA 57.117 25.926 0.00 0.00 28.90 3.27
68 69 9.220635 GCAAAAATATGTTCAAACCTGTTTTTC 57.779 29.630 12.12 7.10 36.50 2.29
69 70 8.734386 TGCAAAAATATGTTCAAACCTGTTTTT 58.266 25.926 10.36 10.36 37.87 1.94
70 71 8.273780 TGCAAAAATATGTTCAAACCTGTTTT 57.726 26.923 0.00 1.70 32.43 2.43
71 72 7.856145 TGCAAAAATATGTTCAAACCTGTTT 57.144 28.000 0.00 0.00 0.00 2.83
72 73 7.856145 TTGCAAAAATATGTTCAAACCTGTT 57.144 28.000 0.00 0.00 0.00 3.16
73 74 7.335422 TGTTTGCAAAAATATGTTCAAACCTGT 59.665 29.630 14.67 0.00 41.22 4.00
74 75 7.692088 TGTTTGCAAAAATATGTTCAAACCTG 58.308 30.769 14.67 0.00 41.22 4.00
75 76 7.856145 TGTTTGCAAAAATATGTTCAAACCT 57.144 28.000 14.67 0.00 41.22 3.50
76 77 8.793472 GTTTGTTTGCAAAAATATGTTCAAACC 58.207 29.630 25.23 15.20 45.01 3.27
77 78 9.553418 AGTTTGTTTGCAAAAATATGTTCAAAC 57.447 25.926 26.77 26.77 45.01 2.93
80 81 8.547069 GCTAGTTTGTTTGCAAAAATATGTTCA 58.453 29.630 14.67 1.89 45.01 3.18
81 82 8.547069 TGCTAGTTTGTTTGCAAAAATATGTTC 58.453 29.630 14.67 0.00 45.01 3.18
82 83 8.430801 TGCTAGTTTGTTTGCAAAAATATGTT 57.569 26.923 14.67 0.00 45.01 2.71
83 84 7.710475 ACTGCTAGTTTGTTTGCAAAAATATGT 59.290 29.630 14.67 0.05 45.01 2.29
84 85 8.075593 ACTGCTAGTTTGTTTGCAAAAATATG 57.924 30.769 14.67 2.81 45.01 1.78
85 86 7.925483 TGACTGCTAGTTTGTTTGCAAAAATAT 59.075 29.630 14.67 2.07 45.01 1.28
86 87 7.261325 TGACTGCTAGTTTGTTTGCAAAAATA 58.739 30.769 14.67 0.04 45.01 1.40
87 88 6.105333 TGACTGCTAGTTTGTTTGCAAAAAT 58.895 32.000 14.67 0.00 45.01 1.82
88 89 5.473931 TGACTGCTAGTTTGTTTGCAAAAA 58.526 33.333 14.67 5.49 45.01 1.94
89 90 5.065704 TGACTGCTAGTTTGTTTGCAAAA 57.934 34.783 14.67 1.61 45.01 2.44
90 91 4.710423 TGACTGCTAGTTTGTTTGCAAA 57.290 36.364 8.05 8.05 41.77 3.68
91 92 4.916983 ATGACTGCTAGTTTGTTTGCAA 57.083 36.364 0.00 0.00 34.90 4.08
92 93 4.337836 TGAATGACTGCTAGTTTGTTTGCA 59.662 37.500 0.00 0.00 0.00 4.08
93 94 4.858935 TGAATGACTGCTAGTTTGTTTGC 58.141 39.130 0.00 0.00 0.00 3.68
94 95 7.754069 TTTTGAATGACTGCTAGTTTGTTTG 57.246 32.000 0.00 0.00 0.00 2.93
193 194 9.320352 ACACATTGCGTATTTGTCTTATATACA 57.680 29.630 0.00 0.00 0.00 2.29
197 198 9.535878 TCATACACATTGCGTATTTGTCTTATA 57.464 29.630 0.00 0.00 30.15 0.98
198 199 8.432110 TCATACACATTGCGTATTTGTCTTAT 57.568 30.769 0.00 0.00 30.15 1.73
199 200 7.762159 TCTCATACACATTGCGTATTTGTCTTA 59.238 33.333 0.00 0.00 30.15 2.10
200 201 6.593770 TCTCATACACATTGCGTATTTGTCTT 59.406 34.615 0.00 0.00 30.15 3.01
201 202 6.106003 TCTCATACACATTGCGTATTTGTCT 58.894 36.000 0.00 0.00 30.15 3.41
202 203 6.344572 TCTCATACACATTGCGTATTTGTC 57.655 37.500 0.00 0.00 30.15 3.18
203 204 6.316140 ACATCTCATACACATTGCGTATTTGT 59.684 34.615 0.00 0.00 32.18 2.83
204 205 6.718388 ACATCTCATACACATTGCGTATTTG 58.282 36.000 0.00 0.00 0.00 2.32
205 206 6.925610 ACATCTCATACACATTGCGTATTT 57.074 33.333 0.00 0.00 0.00 1.40
206 207 9.705290 TTATACATCTCATACACATTGCGTATT 57.295 29.630 0.00 0.00 0.00 1.89
207 208 9.875691 ATTATACATCTCATACACATTGCGTAT 57.124 29.630 0.00 0.00 0.00 3.06
208 209 9.705290 AATTATACATCTCATACACATTGCGTA 57.295 29.630 0.00 0.00 0.00 4.42
209 210 8.607441 AATTATACATCTCATACACATTGCGT 57.393 30.769 0.00 0.00 0.00 5.24
297 298 9.656323 TCTTATTGGTCAGACATACTTATACCT 57.344 33.333 2.17 0.00 0.00 3.08
365 366 3.923017 ATTTCTTCAGTTTTCGCTGGG 57.077 42.857 0.00 0.00 37.12 4.45
366 367 6.205784 TGTTTATTTCTTCAGTTTTCGCTGG 58.794 36.000 0.00 0.00 37.12 4.85
370 371 8.342634 TCTCCTTGTTTATTTCTTCAGTTTTCG 58.657 33.333 0.00 0.00 0.00 3.46
421 432 9.320295 TGGTTATCTTTGGGTTTTTATCATTCT 57.680 29.630 0.00 0.00 0.00 2.40
422 433 9.586435 CTGGTTATCTTTGGGTTTTTATCATTC 57.414 33.333 0.00 0.00 0.00 2.67
425 436 7.726291 TGACTGGTTATCTTTGGGTTTTTATCA 59.274 33.333 0.00 0.00 0.00 2.15
429 440 6.685368 GCTTGACTGGTTATCTTTGGGTTTTT 60.685 38.462 0.00 0.00 0.00 1.94
442 453 4.819630 CAGGTTTAACTGCTTGACTGGTTA 59.180 41.667 0.00 0.00 0.00 2.85
447 458 3.857157 TCCAGGTTTAACTGCTTGACT 57.143 42.857 0.00 0.00 37.16 3.41
482 494 1.315981 TGTAGCTGACTCTGCCCGAG 61.316 60.000 0.00 0.00 45.56 4.63
483 495 1.304134 TGTAGCTGACTCTGCCCGA 60.304 57.895 0.00 0.00 0.00 5.14
485 497 0.108424 CACTGTAGCTGACTCTGCCC 60.108 60.000 0.00 0.00 0.00 5.36
487 499 0.246086 AGCACTGTAGCTGACTCTGC 59.754 55.000 0.00 0.00 44.66 4.26
524 558 2.277084 CTTAACCCCGTCTCATTTCGG 58.723 52.381 0.00 0.00 45.42 4.30
530 564 1.342174 GTGTGACTTAACCCCGTCTCA 59.658 52.381 0.00 0.00 33.00 3.27
532 566 0.316204 CGTGTGACTTAACCCCGTCT 59.684 55.000 0.00 0.00 0.00 4.18
563 597 1.221840 CTGTGGCGTGGGAGCTATT 59.778 57.895 0.00 0.00 37.29 1.73
583 621 1.080501 CACGTCATCCTGAGCACGT 60.081 57.895 0.00 0.00 46.05 4.49
587 625 1.281899 GCTTACACGTCATCCTGAGC 58.718 55.000 0.00 0.00 0.00 4.26
592 630 0.527817 CTCGGGCTTACACGTCATCC 60.528 60.000 0.00 0.00 0.00 3.51
616 654 4.994471 GGGTCGCCGTCGGGTTTT 62.994 66.667 14.38 0.00 36.13 2.43
627 665 3.376078 TACAGGGTGACGGGTCGC 61.376 66.667 3.83 3.83 39.26 5.19
642 680 1.204941 AGCGATGACTTGGTGGAGTAC 59.795 52.381 0.00 0.00 0.00 2.73
646 684 1.215382 CGAGCGATGACTTGGTGGA 59.785 57.895 0.00 0.00 0.00 4.02
648 686 2.456119 GGCGAGCGATGACTTGGTG 61.456 63.158 0.00 0.00 0.00 4.17
649 687 2.125512 GGCGAGCGATGACTTGGT 60.126 61.111 0.00 0.00 0.00 3.67
670 708 1.806623 GCGCCCTAGTAGTTGTGATGG 60.807 57.143 0.00 0.00 0.00 3.51
672 710 1.134788 GTGCGCCCTAGTAGTTGTGAT 60.135 52.381 4.18 0.00 0.00 3.06
673 711 0.245539 GTGCGCCCTAGTAGTTGTGA 59.754 55.000 4.18 0.00 0.00 3.58
675 713 1.214589 CGTGCGCCCTAGTAGTTGT 59.785 57.895 4.18 0.00 0.00 3.32
676 714 1.518572 CCGTGCGCCCTAGTAGTTG 60.519 63.158 4.18 0.00 0.00 3.16
677 715 2.890371 CCGTGCGCCCTAGTAGTT 59.110 61.111 4.18 0.00 0.00 2.24
678 716 3.834799 GCCGTGCGCCCTAGTAGT 61.835 66.667 4.18 0.00 0.00 2.73
713 751 2.434774 GTGGGGTCACTGGGGTTC 59.565 66.667 0.00 0.00 40.58 3.62
746 784 4.436998 CGTGGGGAGCGAGTGGTC 62.437 72.222 0.00 0.00 41.93 4.02
774 839 2.493035 CTTTGGGTTGGGTTGATTTGC 58.507 47.619 0.00 0.00 0.00 3.68
775 840 2.158842 TGCTTTGGGTTGGGTTGATTTG 60.159 45.455 0.00 0.00 0.00 2.32
776 841 2.104622 CTGCTTTGGGTTGGGTTGATTT 59.895 45.455 0.00 0.00 0.00 2.17
777 842 1.693606 CTGCTTTGGGTTGGGTTGATT 59.306 47.619 0.00 0.00 0.00 2.57
778 843 1.133199 TCTGCTTTGGGTTGGGTTGAT 60.133 47.619 0.00 0.00 0.00 2.57
781 846 1.872773 TTTCTGCTTTGGGTTGGGTT 58.127 45.000 0.00 0.00 0.00 4.11
782 847 1.872773 TTTTCTGCTTTGGGTTGGGT 58.127 45.000 0.00 0.00 0.00 4.51
828 893 4.101448 CTGCTTGGACGGGGGAGG 62.101 72.222 0.00 0.00 0.00 4.30
829 894 3.003173 TCTGCTTGGACGGGGGAG 61.003 66.667 0.00 0.00 0.00 4.30
830 895 3.003173 CTCTGCTTGGACGGGGGA 61.003 66.667 0.00 0.00 0.00 4.81
927 1001 0.179020 TGAGTGGCTTTGGTCAGGTG 60.179 55.000 0.00 0.00 0.00 4.00
931 1005 1.227823 CCGTGAGTGGCTTTGGTCA 60.228 57.895 0.00 0.00 0.00 4.02
1128 1215 3.767044 GAGAGAGGAGGGGAGGGGC 62.767 73.684 0.00 0.00 0.00 5.80
1130 1217 0.105709 GAAGAGAGAGGAGGGGAGGG 60.106 65.000 0.00 0.00 0.00 4.30
1135 1222 0.105709 GAGGGGAAGAGAGAGGAGGG 60.106 65.000 0.00 0.00 0.00 4.30
1136 1223 0.105709 GGAGGGGAAGAGAGAGGAGG 60.106 65.000 0.00 0.00 0.00 4.30
1215 1308 1.303074 CAAGCAAGAGCAGCAGGGA 60.303 57.895 0.00 0.00 45.49 4.20
1259 1352 3.853330 CCGATTCCAGCACACGCG 61.853 66.667 3.53 3.53 45.49 6.01
1294 1387 2.824489 TGTGGCACGCGAACCAAA 60.824 55.556 22.78 16.77 45.01 3.28
1322 1415 1.419387 AGATCCTAATCTGCCAGCACC 59.581 52.381 0.00 0.00 40.84 5.01
1330 1423 3.553922 GGTTCGCCAGAGATCCTAATCTG 60.554 52.174 3.30 3.30 42.14 2.90
1376 1690 1.467734 GCAGAAGTGGCACAATCAGAG 59.532 52.381 21.41 11.94 44.16 3.35
1413 1727 6.989659 GGTTCATCCGAATTACAGTAGGATA 58.010 40.000 0.00 0.00 39.47 2.59
1414 1728 5.855045 GGTTCATCCGAATTACAGTAGGAT 58.145 41.667 0.00 0.00 41.94 3.24
1415 1729 5.272283 GGTTCATCCGAATTACAGTAGGA 57.728 43.478 0.00 0.00 32.61 2.94
1539 1862 1.750193 ACCAATTCTACACATGGGCG 58.250 50.000 0.00 0.00 37.26 6.13
1569 1895 1.891919 CCACAACCACCCGTCACAG 60.892 63.158 0.00 0.00 0.00 3.66
1570 1896 1.701031 ATCCACAACCACCCGTCACA 61.701 55.000 0.00 0.00 0.00 3.58
1571 1897 0.536460 AATCCACAACCACCCGTCAC 60.536 55.000 0.00 0.00 0.00 3.67
1572 1898 0.536233 CAATCCACAACCACCCGTCA 60.536 55.000 0.00 0.00 0.00 4.35
1573 1899 1.241315 CCAATCCACAACCACCCGTC 61.241 60.000 0.00 0.00 0.00 4.79
1574 1900 1.228429 CCAATCCACAACCACCCGT 60.228 57.895 0.00 0.00 0.00 5.28
1578 1910 0.678950 CAACCCCAATCCACAACCAC 59.321 55.000 0.00 0.00 0.00 4.16
1624 1956 5.471797 TCATTTCGGTCTGCACATCTAAAAA 59.528 36.000 0.00 0.00 0.00 1.94
1630 1964 1.667724 CCTCATTTCGGTCTGCACATC 59.332 52.381 0.00 0.00 0.00 3.06
1692 2026 0.311790 AACAAAGTGATGCTGGCACG 59.688 50.000 0.00 0.00 41.04 5.34
1703 2037 2.568623 ACTCTAGGGCCAACAAAGTG 57.431 50.000 6.18 0.00 0.00 3.16
1869 2219 6.567959 TCAAGATGCAGATAGAGTTGTACAG 58.432 40.000 0.00 0.00 0.00 2.74
1870 2220 6.530019 TCAAGATGCAGATAGAGTTGTACA 57.470 37.500 0.00 0.00 0.00 2.90
1871 2221 7.009999 CAGTTCAAGATGCAGATAGAGTTGTAC 59.990 40.741 0.00 0.00 0.00 2.90
1872 2222 7.038048 CAGTTCAAGATGCAGATAGAGTTGTA 58.962 38.462 0.00 0.00 0.00 2.41
1873 2223 5.873712 CAGTTCAAGATGCAGATAGAGTTGT 59.126 40.000 0.00 0.00 0.00 3.32
1965 2318 8.189460 AGTACTACGTTGTTTCTTCAGATATCC 58.811 37.037 8.18 0.00 0.00 2.59
1976 2329 9.727627 AACTAGCATATAGTACTACGTTGTTTC 57.272 33.333 8.18 2.71 0.00 2.78
2010 2363 3.832527 ACTAGCATATCCCCGCATTTTT 58.167 40.909 0.00 0.00 0.00 1.94
2011 2364 3.508845 ACTAGCATATCCCCGCATTTT 57.491 42.857 0.00 0.00 0.00 1.82
2012 2365 3.508845 AACTAGCATATCCCCGCATTT 57.491 42.857 0.00 0.00 0.00 2.32
2013 2366 3.508845 AAACTAGCATATCCCCGCATT 57.491 42.857 0.00 0.00 0.00 3.56
2014 2367 4.207891 CTAAACTAGCATATCCCCGCAT 57.792 45.455 0.00 0.00 0.00 4.73
2102 2457 6.431198 TCTAGAAACTTGCAACGAGTTTTT 57.569 33.333 14.51 11.95 44.81 1.94
2103 2458 6.315393 TCTTCTAGAAACTTGCAACGAGTTTT 59.685 34.615 14.51 8.57 44.81 2.43
2170 2525 5.763876 ATAAGCAACAACTAGTTCCTCCT 57.236 39.130 4.77 0.00 38.74 3.69
2197 2552 4.817517 TCGGAACAGAAGGAGTATTTGAC 58.182 43.478 0.00 0.00 0.00 3.18
2209 2564 3.067180 ACGACACTTACTTCGGAACAGAA 59.933 43.478 0.00 0.00 39.63 3.02
2210 2565 2.620115 ACGACACTTACTTCGGAACAGA 59.380 45.455 0.00 0.00 39.63 3.41
2211 2566 2.724690 CACGACACTTACTTCGGAACAG 59.275 50.000 0.00 0.00 39.63 3.16
2212 2567 2.544277 CCACGACACTTACTTCGGAACA 60.544 50.000 0.00 0.00 39.63 3.18
2213 2568 2.056577 CCACGACACTTACTTCGGAAC 58.943 52.381 0.00 0.00 39.63 3.62
2214 2569 1.682854 ACCACGACACTTACTTCGGAA 59.317 47.619 0.00 0.00 39.63 4.30
2215 2570 1.321474 ACCACGACACTTACTTCGGA 58.679 50.000 0.00 0.00 39.63 4.55
2216 2571 2.144482 AACCACGACACTTACTTCGG 57.856 50.000 0.00 0.00 39.63 4.30
2217 2572 4.741676 ACTAAAACCACGACACTTACTTCG 59.258 41.667 0.00 0.00 41.14 3.79
2218 2573 6.256321 TGAACTAAAACCACGACACTTACTTC 59.744 38.462 0.00 0.00 0.00 3.01
2219 2574 6.108015 TGAACTAAAACCACGACACTTACTT 58.892 36.000 0.00 0.00 0.00 2.24
2220 2575 5.663456 TGAACTAAAACCACGACACTTACT 58.337 37.500 0.00 0.00 0.00 2.24
2221 2576 5.971895 TGAACTAAAACCACGACACTTAC 57.028 39.130 0.00 0.00 0.00 2.34
2222 2577 6.981762 TTTGAACTAAAACCACGACACTTA 57.018 33.333 0.00 0.00 0.00 2.24
2223 2578 5.883503 TTTGAACTAAAACCACGACACTT 57.116 34.783 0.00 0.00 0.00 3.16
2224 2579 6.445357 AATTTGAACTAAAACCACGACACT 57.555 33.333 0.00 0.00 0.00 3.55
2225 2580 6.748198 TCAAATTTGAACTAAAACCACGACAC 59.252 34.615 18.45 0.00 33.55 3.67
2226 2581 6.853720 TCAAATTTGAACTAAAACCACGACA 58.146 32.000 18.45 0.00 33.55 4.35
2227 2582 7.743520 TTCAAATTTGAACTAAAACCACGAC 57.256 32.000 26.01 0.00 41.88 4.34
2240 2595 9.092876 GTGTCATGGTTTTAGTTCAAATTTGAA 57.907 29.630 26.01 26.01 44.31 2.69
2241 2596 8.474025 AGTGTCATGGTTTTAGTTCAAATTTGA 58.526 29.630 16.91 16.91 34.92 2.69
2242 2597 8.647143 AGTGTCATGGTTTTAGTTCAAATTTG 57.353 30.769 12.15 12.15 0.00 2.32
2248 2603 9.959749 GAAAATAAGTGTCATGGTTTTAGTTCA 57.040 29.630 0.00 0.00 0.00 3.18
2249 2604 9.113876 CGAAAATAAGTGTCATGGTTTTAGTTC 57.886 33.333 0.00 0.00 0.00 3.01
2250 2605 8.842280 TCGAAAATAAGTGTCATGGTTTTAGTT 58.158 29.630 0.00 0.00 0.00 2.24
2251 2606 8.385898 TCGAAAATAAGTGTCATGGTTTTAGT 57.614 30.769 0.00 0.00 0.00 2.24
2252 2607 9.113876 GTTCGAAAATAAGTGTCATGGTTTTAG 57.886 33.333 0.00 0.00 0.00 1.85
2253 2608 7.799447 CGTTCGAAAATAAGTGTCATGGTTTTA 59.201 33.333 0.00 0.00 0.00 1.52
2254 2609 6.635239 CGTTCGAAAATAAGTGTCATGGTTTT 59.365 34.615 0.00 0.00 0.00 2.43
2255 2610 6.140110 CGTTCGAAAATAAGTGTCATGGTTT 58.860 36.000 0.00 0.00 0.00 3.27
2256 2611 5.334569 CCGTTCGAAAATAAGTGTCATGGTT 60.335 40.000 0.00 0.00 0.00 3.67
2257 2612 4.153475 CCGTTCGAAAATAAGTGTCATGGT 59.847 41.667 0.00 0.00 0.00 3.55
2258 2613 4.390603 TCCGTTCGAAAATAAGTGTCATGG 59.609 41.667 0.00 0.00 0.00 3.66
2259 2614 5.445939 CCTCCGTTCGAAAATAAGTGTCATG 60.446 44.000 0.00 0.00 0.00 3.07
2260 2615 4.630069 CCTCCGTTCGAAAATAAGTGTCAT 59.370 41.667 0.00 0.00 0.00 3.06
2261 2616 3.991773 CCTCCGTTCGAAAATAAGTGTCA 59.008 43.478 0.00 0.00 0.00 3.58
2262 2617 3.370061 CCCTCCGTTCGAAAATAAGTGTC 59.630 47.826 0.00 0.00 0.00 3.67
2263 2618 3.007182 TCCCTCCGTTCGAAAATAAGTGT 59.993 43.478 0.00 0.00 0.00 3.55
2264 2619 3.592059 TCCCTCCGTTCGAAAATAAGTG 58.408 45.455 0.00 0.00 0.00 3.16
2265 2620 3.260128 ACTCCCTCCGTTCGAAAATAAGT 59.740 43.478 0.00 0.00 0.00 2.24
2266 2621 3.858247 ACTCCCTCCGTTCGAAAATAAG 58.142 45.455 0.00 0.00 0.00 1.73
2267 2622 3.967332 ACTCCCTCCGTTCGAAAATAA 57.033 42.857 0.00 0.00 0.00 1.40
2268 2623 6.906157 ATATACTCCCTCCGTTCGAAAATA 57.094 37.500 0.00 0.00 0.00 1.40
2269 2624 5.803237 ATATACTCCCTCCGTTCGAAAAT 57.197 39.130 0.00 0.00 0.00 1.82
2270 2625 5.127519 TGAATATACTCCCTCCGTTCGAAAA 59.872 40.000 0.00 0.00 0.00 2.29
2271 2626 4.646040 TGAATATACTCCCTCCGTTCGAAA 59.354 41.667 0.00 0.00 0.00 3.46
2272 2627 4.209538 TGAATATACTCCCTCCGTTCGAA 58.790 43.478 0.00 0.00 0.00 3.71
2273 2628 3.819337 CTGAATATACTCCCTCCGTTCGA 59.181 47.826 0.00 0.00 0.00 3.71
2274 2629 3.568853 ACTGAATATACTCCCTCCGTTCG 59.431 47.826 0.00 0.00 0.00 3.95
2275 2630 5.290386 CAACTGAATATACTCCCTCCGTTC 58.710 45.833 0.00 0.00 0.00 3.95
2276 2631 4.443034 GCAACTGAATATACTCCCTCCGTT 60.443 45.833 0.00 0.00 0.00 4.44
2277 2632 3.069729 GCAACTGAATATACTCCCTCCGT 59.930 47.826 0.00 0.00 0.00 4.69
2278 2633 3.069586 TGCAACTGAATATACTCCCTCCG 59.930 47.826 0.00 0.00 0.00 4.63
2279 2634 4.689612 TGCAACTGAATATACTCCCTCC 57.310 45.455 0.00 0.00 0.00 4.30
2280 2635 8.200792 CCTATATGCAACTGAATATACTCCCTC 58.799 40.741 0.00 0.00 29.35 4.30
2281 2636 7.901322 TCCTATATGCAACTGAATATACTCCCT 59.099 37.037 0.00 0.00 29.35 4.20
2282 2637 8.079211 TCCTATATGCAACTGAATATACTCCC 57.921 38.462 0.00 0.00 29.35 4.30
2298 2653 8.940952 GGAGTTTGTGAAGATAATCCTATATGC 58.059 37.037 0.00 0.00 0.00 3.14
2304 2659 4.079730 GGGGGAGTTTGTGAAGATAATCCT 60.080 45.833 0.00 0.00 0.00 3.24
2328 2683 8.729756 CACTATCTGTCTATAAGTCAGATGGAG 58.270 40.741 23.58 16.46 45.10 3.86
2401 2756 9.803130 CAAATTCACTTATGATGCTAGAATACG 57.197 33.333 0.00 0.00 33.85 3.06
2404 2759 8.461249 AGCAAATTCACTTATGATGCTAGAAT 57.539 30.769 0.00 0.00 43.64 2.40
2452 2807 0.773644 AAGTGGGCAGTCAGGATTGT 59.226 50.000 0.00 0.00 0.00 2.71
2571 2930 5.650283 TGATTCCCCAAAAGTTATTCCAGT 58.350 37.500 0.00 0.00 0.00 4.00
2598 2957 7.546250 ACTCATCCTTATAGTGATACCTTGG 57.454 40.000 0.00 0.00 0.00 3.61
2616 2975 8.443953 ACAGGCTATGAAGAAATAAACTCATC 57.556 34.615 0.00 0.00 0.00 2.92
2638 2997 3.521560 ACATGGTGCAGTAATCGTACAG 58.478 45.455 0.00 0.00 32.12 2.74
2649 3008 0.675083 TTGGAGCAAACATGGTGCAG 59.325 50.000 21.45 0.60 44.74 4.41
2717 3076 6.703319 TCGAGATGGTAAAAGTTTGGTATCA 58.297 36.000 0.00 0.00 0.00 2.15
2722 3081 4.003648 AGCTCGAGATGGTAAAAGTTTGG 58.996 43.478 18.75 0.00 0.00 3.28
2754 3118 9.959749 AACGAGATTTTGTATTTTGTATGTGTT 57.040 25.926 0.00 0.00 0.00 3.32
2761 3125 9.010029 AGTCCATAACGAGATTTTGTATTTTGT 57.990 29.630 0.00 0.00 0.00 2.83
2762 3126 9.840427 AAGTCCATAACGAGATTTTGTATTTTG 57.160 29.630 0.00 0.00 0.00 2.44
2764 3128 8.388103 CGAAGTCCATAACGAGATTTTGTATTT 58.612 33.333 0.00 0.00 0.00 1.40
2765 3129 7.465513 GCGAAGTCCATAACGAGATTTTGTATT 60.466 37.037 0.00 0.00 0.00 1.89
2776 3140 2.736144 AACAGCGAAGTCCATAACGA 57.264 45.000 0.00 0.00 0.00 3.85
2778 3142 3.252458 ACCAAAACAGCGAAGTCCATAAC 59.748 43.478 0.00 0.00 0.00 1.89
2782 3146 1.757682 AACCAAAACAGCGAAGTCCA 58.242 45.000 0.00 0.00 0.00 4.02
2783 3147 2.863401 AAACCAAAACAGCGAAGTCC 57.137 45.000 0.00 0.00 0.00 3.85
2836 3201 2.727123 TCAAGTGGCACCTGAAGAAA 57.273 45.000 16.26 0.00 0.00 2.52
2971 3336 1.098050 GTGAGGGCGATGAAAGCAAT 58.902 50.000 0.00 0.00 36.08 3.56
3540 3905 3.813606 ATGTGCCAGCCTTGCCACA 62.814 57.895 0.00 0.00 0.00 4.17
3582 3947 3.323758 GACGGCACCACCTGGCATA 62.324 63.158 0.00 0.00 46.10 3.14
3767 4132 4.752101 GTCCCATCAATTTCTCCGATACAG 59.248 45.833 0.00 0.00 0.00 2.74
3771 4136 2.485479 CCGTCCCATCAATTTCTCCGAT 60.485 50.000 0.00 0.00 0.00 4.18
3781 4146 1.377229 GGTTCACCCGTCCCATCAA 59.623 57.895 0.00 0.00 0.00 2.57
3900 4265 4.814900 CCGGTGAGGTCTGAATCG 57.185 61.111 0.00 0.00 34.51 3.34
4067 4432 0.837272 CAGCCGGGGAGGAATTAAGA 59.163 55.000 2.18 0.00 45.00 2.10
4074 4439 1.074248 GAAAAACAGCCGGGGAGGA 59.926 57.895 2.18 0.00 45.00 3.71
4079 4444 1.530655 ACAGGGAAAAACAGCCGGG 60.531 57.895 2.18 0.00 0.00 5.73
4092 4457 8.131100 CACTAATGCTGATAAATAAACACAGGG 58.869 37.037 0.00 0.00 0.00 4.45
4093 4458 8.892723 TCACTAATGCTGATAAATAAACACAGG 58.107 33.333 0.00 0.00 0.00 4.00
4094 4459 9.708222 GTCACTAATGCTGATAAATAAACACAG 57.292 33.333 0.00 0.00 0.00 3.66
4182 4548 3.008049 ACCAGGTTCACCAATAGACAGTC 59.992 47.826 0.00 0.00 38.89 3.51
4193 4559 4.400529 AACAAATTCAACCAGGTTCACC 57.599 40.909 0.12 0.00 0.00 4.02
4212 4578 8.373992 GTCGTCTTGTCAACAGAAGATTATAAC 58.626 37.037 0.00 0.00 31.05 1.89
4215 4581 5.573282 CGTCGTCTTGTCAACAGAAGATTAT 59.427 40.000 0.00 0.00 31.05 1.28
4226 4592 0.669619 TGCTACCGTCGTCTTGTCAA 59.330 50.000 0.00 0.00 0.00 3.18
4235 4601 0.729478 CAGACAGTGTGCTACCGTCG 60.729 60.000 0.00 0.00 40.80 5.12
4238 4604 1.006220 TGCAGACAGTGTGCTACCG 60.006 57.895 22.33 0.00 41.78 4.02
4240 4606 2.029828 ACTAGTGCAGACAGTGTGCTAC 60.030 50.000 22.33 17.50 41.78 3.58
4243 4609 2.724977 TACTAGTGCAGACAGTGTGC 57.275 50.000 15.79 15.79 41.59 4.57
4306 4672 9.360093 CAAAATGTTGAACTAAACAGGTTTACA 57.640 29.630 0.00 0.38 42.99 2.41
4307 4673 8.325282 GCAAAATGTTGAACTAAACAGGTTTAC 58.675 33.333 0.00 0.00 42.99 2.01
4336 4702 0.804989 GTCAAGTGGCACAGGTATGC 59.195 55.000 21.41 0.00 41.80 3.14
4338 4704 3.439857 AATGTCAAGTGGCACAGGTAT 57.560 42.857 21.41 4.58 41.80 2.73
4341 4707 3.057315 CCTAAAATGTCAAGTGGCACAGG 60.057 47.826 21.41 11.29 41.80 4.00
4342 4708 3.569701 ACCTAAAATGTCAAGTGGCACAG 59.430 43.478 21.41 12.04 41.80 3.66
4343 4709 3.561143 ACCTAAAATGTCAAGTGGCACA 58.439 40.909 21.41 0.00 29.57 4.57
4344 4710 4.760204 ACTACCTAAAATGTCAAGTGGCAC 59.240 41.667 10.29 10.29 29.57 5.01
4424 4790 6.572314 GCAATTTCACCAAGGCTATGTAAAGT 60.572 38.462 0.00 0.00 0.00 2.66
4440 4806 3.733443 AGTGGAAAGGTGCAATTTCAC 57.267 42.857 21.02 15.90 38.21 3.18
4441 4807 4.751767 AAAGTGGAAAGGTGCAATTTCA 57.248 36.364 21.02 6.53 38.78 2.69
4442 4808 4.875536 ACAAAAGTGGAAAGGTGCAATTTC 59.124 37.500 14.42 14.42 41.66 2.17
4443 4809 4.842574 ACAAAAGTGGAAAGGTGCAATTT 58.157 34.783 0.00 0.00 43.91 1.82
4446 4812 4.020543 ACTACAAAAGTGGAAAGGTGCAA 58.979 39.130 0.00 0.00 36.93 4.08
4483 4859 9.970395 GATGCCATTTTCACATAATTCTGATAA 57.030 29.630 0.00 0.00 0.00 1.75
4610 5021 6.201806 GGACATCTACACTTCATAACTGATGC 59.798 42.308 0.00 0.00 35.29 3.91
4616 5027 7.707035 CAGTAAGGGACATCTACACTTCATAAC 59.293 40.741 0.00 0.00 0.00 1.89
4621 5032 4.160626 AGCAGTAAGGGACATCTACACTTC 59.839 45.833 0.00 0.00 0.00 3.01
4643 5058 5.409826 GGAATCATAAACCGGAAGCATAGAG 59.590 44.000 9.46 0.00 0.00 2.43
4733 5148 2.950433 GCATATGCAACATGGTATGCC 58.050 47.619 22.84 0.00 42.06 4.40
4833 5248 2.182030 GGGACGACGAGCAAGAGG 59.818 66.667 0.00 0.00 0.00 3.69
4843 5258 2.202756 GGATCGCACTGGGACGAC 60.203 66.667 0.00 0.00 41.76 4.34
4868 5283 8.868103 TGAATGTGATCTGAAGAATCTATAGCT 58.132 33.333 0.00 0.00 0.00 3.32
4931 5347 9.632807 CTTGCTTCTAAGTATATCAGGTATCAC 57.367 37.037 0.00 0.00 0.00 3.06
4943 5359 7.123397 TCTGACTCATGTCTTGCTTCTAAGTAT 59.877 37.037 0.00 0.00 43.29 2.12
4944 5360 6.434340 TCTGACTCATGTCTTGCTTCTAAGTA 59.566 38.462 0.00 0.00 43.29 2.24
4962 5378 0.170116 CAGCACCTCGACTCTGACTC 59.830 60.000 0.00 0.00 0.00 3.36
5035 5451 3.135306 CGACATCTCGCTCTACACG 57.865 57.895 0.00 0.00 31.91 4.49
5074 5490 2.044793 ATCTCCTTCACTGACCCCAA 57.955 50.000 0.00 0.00 0.00 4.12
5099 5515 2.356069 CAGCACGCTACTGTCTCAGATA 59.644 50.000 3.70 0.00 35.18 1.98
5184 5600 2.728007 CCAGGAAAGGGAACATCTTCC 58.272 52.381 0.00 0.00 45.04 3.46
5205 5621 1.952296 CCATAGGAGGCAGCAATTCAC 59.048 52.381 0.00 0.00 0.00 3.18
5221 5637 1.136891 CATCGACTGCACCTGTCCATA 59.863 52.381 0.00 0.00 0.00 2.74
5223 5639 1.293179 CATCGACTGCACCTGTCCA 59.707 57.895 0.00 0.00 0.00 4.02
5237 5653 2.404265 TTTTGACAGCACAAGCATCG 57.596 45.000 0.00 0.00 45.49 3.84
5295 5711 6.597280 CCAGGAATCCTCTTTAAGCTATATGC 59.403 42.308 0.00 0.00 43.29 3.14
5296 5712 7.911651 TCCAGGAATCCTCTTTAAGCTATATG 58.088 38.462 0.00 0.00 0.00 1.78
5300 5716 6.831664 ATTCCAGGAATCCTCTTTAAGCTA 57.168 37.500 9.12 0.00 0.00 3.32
5305 5721 5.880332 CGTTCAATTCCAGGAATCCTCTTTA 59.120 40.000 15.53 0.00 30.29 1.85
5315 5731 2.552155 CCTTCACCGTTCAATTCCAGGA 60.552 50.000 0.00 0.00 0.00 3.86
5395 5813 0.631212 GAACCCCATGACCCCTCATT 59.369 55.000 0.00 0.00 34.65 2.57
5400 5818 2.043953 GCAGAACCCCATGACCCC 60.044 66.667 0.00 0.00 0.00 4.95
5402 5820 0.393537 CAGAGCAGAACCCCATGACC 60.394 60.000 0.00 0.00 0.00 4.02
5410 5828 4.704833 TGCCGCCAGAGCAGAACC 62.705 66.667 0.00 0.00 39.83 3.62
5427 5845 3.216371 TTCCCCTCCCTCCCCACT 61.216 66.667 0.00 0.00 0.00 4.00
5463 5997 1.521681 GTAGACCGCTGGATGCACC 60.522 63.158 0.00 0.00 43.06 5.01
5475 6009 1.382692 CCGAACGGAGGGAGTAGACC 61.383 65.000 7.53 0.00 37.50 3.85
5479 6013 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
5480 6014 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
5481 6015 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
5483 6017 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
5484 6018 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
5485 6019 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
5486 6020 2.030007 ACGACAAGTAATTCCGAACGGA 60.030 45.455 12.04 12.04 43.52 4.69
5487 6021 2.331194 ACGACAAGTAATTCCGAACGG 58.669 47.619 6.94 6.94 0.00 4.44
5488 6022 4.406069 TCTACGACAAGTAATTCCGAACG 58.594 43.478 0.00 0.00 34.45 3.95
5489 6023 6.695292 TTTCTACGACAAGTAATTCCGAAC 57.305 37.500 0.00 0.00 34.45 3.95
5490 6024 6.311935 CCATTTCTACGACAAGTAATTCCGAA 59.688 38.462 0.00 0.00 34.45 4.30
5491 6025 5.808540 CCATTTCTACGACAAGTAATTCCGA 59.191 40.000 0.00 0.00 34.45 4.55
5492 6026 5.808540 TCCATTTCTACGACAAGTAATTCCG 59.191 40.000 0.00 0.00 34.45 4.30
5493 6027 7.280205 ACATCCATTTCTACGACAAGTAATTCC 59.720 37.037 0.00 0.00 34.45 3.01
5494 6028 8.197988 ACATCCATTTCTACGACAAGTAATTC 57.802 34.615 0.00 0.00 34.45 2.17
5495 6029 9.832445 ATACATCCATTTCTACGACAAGTAATT 57.168 29.630 0.00 0.00 34.45 1.40
5496 6030 9.477484 GATACATCCATTTCTACGACAAGTAAT 57.523 33.333 0.00 0.00 34.45 1.89
5497 6031 8.692710 AGATACATCCATTTCTACGACAAGTAA 58.307 33.333 0.00 0.00 34.45 2.24
5498 6032 8.234136 AGATACATCCATTTCTACGACAAGTA 57.766 34.615 0.00 0.00 0.00 2.24
5499 6033 7.113658 AGATACATCCATTTCTACGACAAGT 57.886 36.000 0.00 0.00 0.00 3.16
5500 6034 8.568794 TCTAGATACATCCATTTCTACGACAAG 58.431 37.037 0.00 0.00 0.00 3.16
5501 6035 8.350722 GTCTAGATACATCCATTTCTACGACAA 58.649 37.037 0.00 0.00 0.00 3.18
5502 6036 7.307811 CGTCTAGATACATCCATTTCTACGACA 60.308 40.741 0.00 0.00 0.00 4.35
5503 6037 7.016466 CGTCTAGATACATCCATTTCTACGAC 58.984 42.308 0.00 0.00 0.00 4.34
5504 6038 6.709397 ACGTCTAGATACATCCATTTCTACGA 59.291 38.462 0.00 0.00 29.41 3.43
5505 6039 6.900189 ACGTCTAGATACATCCATTTCTACG 58.100 40.000 0.00 0.00 0.00 3.51
5531 6065 9.542462 CGGAAATGGATGTATCTAGAACTAAAA 57.458 33.333 0.00 0.00 0.00 1.52
5532 6066 8.920174 TCGGAAATGGATGTATCTAGAACTAAA 58.080 33.333 0.00 0.00 0.00 1.85
5533 6067 8.473358 TCGGAAATGGATGTATCTAGAACTAA 57.527 34.615 0.00 0.00 0.00 2.24
5534 6068 7.942894 TCTCGGAAATGGATGTATCTAGAACTA 59.057 37.037 0.00 0.00 0.00 2.24
5535 6069 6.778069 TCTCGGAAATGGATGTATCTAGAACT 59.222 38.462 0.00 0.00 0.00 3.01
5536 6070 6.864165 GTCTCGGAAATGGATGTATCTAGAAC 59.136 42.308 0.00 0.00 0.00 3.01
5537 6071 6.549736 TGTCTCGGAAATGGATGTATCTAGAA 59.450 38.462 0.00 0.00 0.00 2.10
5538 6072 6.068670 TGTCTCGGAAATGGATGTATCTAGA 58.931 40.000 0.00 0.00 0.00 2.43
5539 6073 6.332735 TGTCTCGGAAATGGATGTATCTAG 57.667 41.667 0.00 0.00 0.00 2.43
5540 6074 6.323996 ACTTGTCTCGGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 0.00 1.98
5541 6075 5.129485 ACTTGTCTCGGAAATGGATGTATCT 59.871 40.000 0.00 0.00 0.00 1.98
5542 6076 5.360591 ACTTGTCTCGGAAATGGATGTATC 58.639 41.667 0.00 0.00 0.00 2.24
5543 6077 5.359194 ACTTGTCTCGGAAATGGATGTAT 57.641 39.130 0.00 0.00 0.00 2.29
5544 6078 4.819105 ACTTGTCTCGGAAATGGATGTA 57.181 40.909 0.00 0.00 0.00 2.29
5545 6079 3.703001 ACTTGTCTCGGAAATGGATGT 57.297 42.857 0.00 0.00 0.00 3.06
5546 6080 6.238484 GGAATTACTTGTCTCGGAAATGGATG 60.238 42.308 0.00 0.00 0.00 3.51
5547 6081 5.823045 GGAATTACTTGTCTCGGAAATGGAT 59.177 40.000 0.00 0.00 0.00 3.41
5548 6082 5.183228 GGAATTACTTGTCTCGGAAATGGA 58.817 41.667 0.00 0.00 0.00 3.41
5549 6083 4.034048 CGGAATTACTTGTCTCGGAAATGG 59.966 45.833 0.00 0.00 0.00 3.16
5550 6084 4.868171 TCGGAATTACTTGTCTCGGAAATG 59.132 41.667 0.00 0.00 0.00 2.32
5551 6085 5.080969 TCGGAATTACTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
5552 6086 4.524316 TCGGAATTACTTGTCTCGGAAA 57.476 40.909 0.00 0.00 0.00 3.13
5553 6087 4.240096 GTTCGGAATTACTTGTCTCGGAA 58.760 43.478 0.00 0.00 0.00 4.30
5554 6088 3.671433 CGTTCGGAATTACTTGTCTCGGA 60.671 47.826 0.00 0.00 0.00 4.55
5555 6089 2.597305 CGTTCGGAATTACTTGTCTCGG 59.403 50.000 0.00 0.00 0.00 4.63
5556 6090 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
5557 6091 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
5558 6092 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
5559 6093 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
5560 6094 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
5561 6095 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
5562 6096 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
5563 6097 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
5564 6098 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
5565 6099 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
5566 6100 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
5567 6101 1.400737 CTACTCCCTCCGTTCGGAAT 58.599 55.000 14.79 2.09 33.41 3.01
5568 6102 0.682209 CCTACTCCCTCCGTTCGGAA 60.682 60.000 14.79 0.04 33.41 4.30
5569 6103 1.077212 CCTACTCCCTCCGTTCGGA 60.077 63.158 13.34 13.34 0.00 4.55
5570 6104 0.969409 AACCTACTCCCTCCGTTCGG 60.969 60.000 4.74 4.74 0.00 4.30
5571 6105 0.893447 AAACCTACTCCCTCCGTTCG 59.107 55.000 0.00 0.00 0.00 3.95
5572 6106 1.622312 ACAAACCTACTCCCTCCGTTC 59.378 52.381 0.00 0.00 0.00 3.95
5573 6107 1.725803 ACAAACCTACTCCCTCCGTT 58.274 50.000 0.00 0.00 0.00 4.44
5574 6108 1.622312 GAACAAACCTACTCCCTCCGT 59.378 52.381 0.00 0.00 0.00 4.69
5575 6109 1.621814 TGAACAAACCTACTCCCTCCG 59.378 52.381 0.00 0.00 0.00 4.63
5576 6110 3.782656 TTGAACAAACCTACTCCCTCC 57.217 47.619 0.00 0.00 0.00 4.30
5577 6111 5.880887 CCTAATTGAACAAACCTACTCCCTC 59.119 44.000 0.00 0.00 0.00 4.30
5578 6112 5.550403 TCCTAATTGAACAAACCTACTCCCT 59.450 40.000 0.00 0.00 0.00 4.20
5579 6113 5.812286 TCCTAATTGAACAAACCTACTCCC 58.188 41.667 0.00 0.00 0.00 4.30
5580 6114 7.939784 AATCCTAATTGAACAAACCTACTCC 57.060 36.000 0.00 0.00 0.00 3.85
5582 6116 9.981114 CAAAAATCCTAATTGAACAAACCTACT 57.019 29.630 0.00 0.00 0.00 2.57
5583 6117 9.203421 CCAAAAATCCTAATTGAACAAACCTAC 57.797 33.333 0.00 0.00 0.00 3.18
5599 6133 2.024414 GCCACGATAGCCAAAAATCCT 58.976 47.619 0.00 0.00 42.67 3.24
5615 6149 2.811317 CGTCAGAGCCGAAGCCAC 60.811 66.667 0.00 0.00 41.25 5.01
5624 6158 1.134560 ACCTTATTCGACCGTCAGAGC 59.865 52.381 0.00 0.00 0.00 4.09
5629 6163 4.107363 AGAGAAACCTTATTCGACCGTC 57.893 45.455 0.00 0.00 34.46 4.79
5666 6202 1.602377 CCCCCGATCAAACTATTTCGC 59.398 52.381 0.00 0.00 0.00 4.70
5682 6218 3.391382 CTGACCTGGTCGACCCCC 61.391 72.222 31.19 17.11 34.95 5.40
5683 6219 3.391382 CCTGACCTGGTCGACCCC 61.391 72.222 31.19 17.45 34.95 4.95
5720 6256 3.451402 TGCAGACACTACCTCCTAGAA 57.549 47.619 0.00 0.00 0.00 2.10
5726 6262 3.551046 CCATACGATGCAGACACTACCTC 60.551 52.174 0.00 0.00 0.00 3.85
5798 6334 2.352421 CGACTACCACCTTCGTCAACAT 60.352 50.000 0.00 0.00 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.