Multiple sequence alignment - TraesCS5A01G365400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G365400 chr5A 100.000 4544 0 0 1 4544 565500129 565495586 0.000000e+00 8392.0
1 TraesCS5A01G365400 chr5A 81.313 2756 424 54 940 3659 12194271 12191571 0.000000e+00 2152.0
2 TraesCS5A01G365400 chr5A 93.143 175 9 2 4023 4195 206731025 206730852 2.100000e-63 254.0
3 TraesCS5A01G365400 chr5D 89.477 3060 285 19 626 3662 447105365 447108410 0.000000e+00 3832.0
4 TraesCS5A01G365400 chr5D 83.744 1298 188 11 2364 3653 18085131 18086413 0.000000e+00 1206.0
5 TraesCS5A01G365400 chr5D 93.226 620 40 2 3 621 447100770 447101388 0.000000e+00 911.0
6 TraesCS5A01G365400 chr5D 87.379 309 38 1 1 308 380520135 380520443 2.010000e-93 353.0
7 TraesCS5A01G365400 chr5D 86.047 172 19 4 3837 4003 447108715 447108886 3.610000e-41 180.0
8 TraesCS5A01G365400 chr5D 92.453 53 3 1 4197 4249 29506396 29506447 1.750000e-09 75.0
9 TraesCS5A01G365400 chr5B 90.819 2211 200 2 1455 3662 545596672 545594462 0.000000e+00 2955.0
10 TraesCS5A01G365400 chr5B 83.493 2617 377 36 938 3536 546075342 546072763 0.000000e+00 2388.0
11 TraesCS5A01G365400 chr5B 83.307 2558 382 21 949 3494 546145953 546143429 0.000000e+00 2316.0
12 TraesCS5A01G365400 chr5B 81.134 2751 422 59 940 3651 13776188 13773496 0.000000e+00 2115.0
13 TraesCS5A01G365400 chr5B 78.538 2544 440 60 1025 3536 549548020 549550489 0.000000e+00 1576.0
14 TraesCS5A01G365400 chr5B 89.692 1135 74 22 361 1463 545612863 545611740 0.000000e+00 1408.0
15 TraesCS5A01G365400 chr5B 91.755 376 28 2 3666 4040 545594426 545594053 1.870000e-143 520.0
16 TraesCS5A01G365400 chr5B 90.756 119 9 1 4379 4497 545583727 545583611 1.690000e-34 158.0
17 TraesCS5A01G365400 chr2D 81.144 2588 381 58 995 3539 469984034 469986557 0.000000e+00 1977.0
18 TraesCS5A01G365400 chr2D 80.604 2583 444 36 989 3539 469990575 469993132 0.000000e+00 1941.0
19 TraesCS5A01G365400 chr2D 86.039 308 42 1 2 308 529000916 529001223 3.390000e-86 329.0
20 TraesCS5A01G365400 chr2D 91.758 182 11 3 4024 4203 416758791 416758612 2.710000e-62 250.0
21 TraesCS5A01G365400 chr2B 80.683 2578 442 36 989 3539 548623978 548626526 0.000000e+00 1951.0
22 TraesCS5A01G365400 chr2B 80.316 2596 390 69 993 3538 729766588 729769112 0.000000e+00 1851.0
23 TraesCS5A01G365400 chr2B 79.792 1920 288 56 986 2861 548609499 548611362 0.000000e+00 1304.0
24 TraesCS5A01G365400 chr2B 86.084 309 42 1 1 308 158008002 158008310 9.420000e-87 331.0
25 TraesCS5A01G365400 chr2A 80.511 2581 449 32 989 3539 611302816 611305372 0.000000e+00 1930.0
26 TraesCS5A01G365400 chr2A 84.865 1077 143 14 2464 3539 611297823 611298880 0.000000e+00 1068.0
27 TraesCS5A01G365400 chr2A 86.774 310 38 3 1 308 164870492 164870184 4.350000e-90 342.0
28 TraesCS5A01G365400 chr2A 85.714 308 43 1 1 308 747329639 747329945 1.580000e-84 324.0
29 TraesCS5A01G365400 chr1A 80.489 2578 430 47 997 3539 8331947 8334486 0.000000e+00 1906.0
30 TraesCS5A01G365400 chr1A 79.551 2675 453 51 1025 3654 8144473 8141848 0.000000e+00 1823.0
31 TraesCS5A01G365400 chr1A 79.309 2547 434 51 1001 3514 8327147 8329633 0.000000e+00 1698.0
32 TraesCS5A01G365400 chr1A 80.856 1917 314 33 940 2840 9375702 9373823 0.000000e+00 1458.0
33 TraesCS5A01G365400 chr1A 79.276 1491 261 23 1265 2737 8364368 8365828 0.000000e+00 998.0
34 TraesCS5A01G365400 chr1D 79.689 2698 468 41 997 3653 6913159 6915817 0.000000e+00 1873.0
35 TraesCS5A01G365400 chr1D 79.455 2677 448 59 1025 3653 6714581 6711959 0.000000e+00 1803.0
36 TraesCS5A01G365400 chr1D 78.247 2556 447 54 1025 3536 6898483 6900973 0.000000e+00 1539.0
37 TraesCS5A01G365400 chr1D 94.737 171 6 2 4032 4199 36612132 36612302 3.490000e-66 263.0
38 TraesCS5A01G365400 chr1B 79.523 2598 462 46 1087 3654 8819826 8817269 0.000000e+00 1786.0
39 TraesCS5A01G365400 chr1B 78.941 2531 422 66 1025 3510 548199863 548197399 0.000000e+00 1618.0
40 TraesCS5A01G365400 chr4B 86.408 309 41 1 1 308 190165720 190165412 2.030000e-88 337.0
41 TraesCS5A01G365400 chr4B 85.761 309 42 2 1 308 443634851 443635158 4.380000e-85 326.0
42 TraesCS5A01G365400 chr4B 92.222 180 12 1 4031 4208 551079913 551080092 2.100000e-63 254.0
43 TraesCS5A01G365400 chr4B 93.567 171 8 2 4033 4201 66471515 66471346 7.550000e-63 252.0
44 TraesCS5A01G365400 chr4B 93.878 49 3 0 4201 4249 417572527 417572575 1.750000e-09 75.0
45 TraesCS5A01G365400 chr6B 85.761 309 43 1 1 308 146669958 146670266 4.380000e-85 326.0
46 TraesCS5A01G365400 chr6B 92.453 53 3 1 4197 4249 58685362 58685413 1.750000e-09 75.0
47 TraesCS5A01G365400 chr7A 93.678 174 8 2 4024 4195 500781933 500781761 1.620000e-64 257.0
48 TraesCS5A01G365400 chr7A 93.103 174 9 2 4024 4195 431989104 431989276 7.550000e-63 252.0
49 TraesCS5A01G365400 chr7A 97.917 48 1 0 1114 1161 558082421 558082374 2.910000e-12 84.2
50 TraesCS5A01G365400 chr7A 85.714 77 11 0 1085 1161 558093370 558093294 1.050000e-11 82.4
51 TraesCS5A01G365400 chr6A 93.642 173 8 2 4027 4197 287304054 287304225 5.830000e-64 255.0
52 TraesCS5A01G365400 chr6D 91.444 187 12 3 4033 4217 206560274 206560458 2.100000e-63 254.0
53 TraesCS5A01G365400 chr7B 81.579 114 15 4 1082 1195 521142758 521142651 6.260000e-14 89.8
54 TraesCS5A01G365400 chr7B 73.563 261 45 15 1103 1360 521133613 521133374 1.360000e-10 78.7
55 TraesCS5A01G365400 chr7B 92.453 53 4 0 4197 4249 314643966 314644018 4.870000e-10 76.8
56 TraesCS5A01G365400 chr7D 97.917 48 1 0 1114 1161 491790824 491790777 2.910000e-12 84.2
57 TraesCS5A01G365400 chrUn 92.593 54 3 1 4197 4249 114592872 114592925 4.870000e-10 76.8
58 TraesCS5A01G365400 chrUn 93.182 44 1 2 4207 4249 21395873 21395915 3.800000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G365400 chr5A 565495586 565500129 4543 True 8392.0 8392 100.000000 1 4544 1 chr5A.!!$R3 4543
1 TraesCS5A01G365400 chr5A 12191571 12194271 2700 True 2152.0 2152 81.313000 940 3659 1 chr5A.!!$R1 2719
2 TraesCS5A01G365400 chr5D 447100770 447108886 8116 False 1641.0 3832 89.583333 3 4003 3 chr5D.!!$F4 4000
3 TraesCS5A01G365400 chr5D 18085131 18086413 1282 False 1206.0 1206 83.744000 2364 3653 1 chr5D.!!$F1 1289
4 TraesCS5A01G365400 chr5B 546072763 546075342 2579 True 2388.0 2388 83.493000 938 3536 1 chr5B.!!$R4 2598
5 TraesCS5A01G365400 chr5B 546143429 546145953 2524 True 2316.0 2316 83.307000 949 3494 1 chr5B.!!$R5 2545
6 TraesCS5A01G365400 chr5B 13773496 13776188 2692 True 2115.0 2115 81.134000 940 3651 1 chr5B.!!$R1 2711
7 TraesCS5A01G365400 chr5B 545594053 545596672 2619 True 1737.5 2955 91.287000 1455 4040 2 chr5B.!!$R6 2585
8 TraesCS5A01G365400 chr5B 549548020 549550489 2469 False 1576.0 1576 78.538000 1025 3536 1 chr5B.!!$F1 2511
9 TraesCS5A01G365400 chr5B 545611740 545612863 1123 True 1408.0 1408 89.692000 361 1463 1 chr5B.!!$R3 1102
10 TraesCS5A01G365400 chr2D 469984034 469986557 2523 False 1977.0 1977 81.144000 995 3539 1 chr2D.!!$F1 2544
11 TraesCS5A01G365400 chr2D 469990575 469993132 2557 False 1941.0 1941 80.604000 989 3539 1 chr2D.!!$F2 2550
12 TraesCS5A01G365400 chr2B 548623978 548626526 2548 False 1951.0 1951 80.683000 989 3539 1 chr2B.!!$F3 2550
13 TraesCS5A01G365400 chr2B 729766588 729769112 2524 False 1851.0 1851 80.316000 993 3538 1 chr2B.!!$F4 2545
14 TraesCS5A01G365400 chr2B 548609499 548611362 1863 False 1304.0 1304 79.792000 986 2861 1 chr2B.!!$F2 1875
15 TraesCS5A01G365400 chr2A 611297823 611305372 7549 False 1499.0 1930 82.688000 989 3539 2 chr2A.!!$F2 2550
16 TraesCS5A01G365400 chr1A 8141848 8144473 2625 True 1823.0 1823 79.551000 1025 3654 1 chr1A.!!$R1 2629
17 TraesCS5A01G365400 chr1A 8327147 8334486 7339 False 1802.0 1906 79.899000 997 3539 2 chr1A.!!$F2 2542
18 TraesCS5A01G365400 chr1A 9373823 9375702 1879 True 1458.0 1458 80.856000 940 2840 1 chr1A.!!$R2 1900
19 TraesCS5A01G365400 chr1A 8364368 8365828 1460 False 998.0 998 79.276000 1265 2737 1 chr1A.!!$F1 1472
20 TraesCS5A01G365400 chr1D 6913159 6915817 2658 False 1873.0 1873 79.689000 997 3653 1 chr1D.!!$F2 2656
21 TraesCS5A01G365400 chr1D 6711959 6714581 2622 True 1803.0 1803 79.455000 1025 3653 1 chr1D.!!$R1 2628
22 TraesCS5A01G365400 chr1D 6898483 6900973 2490 False 1539.0 1539 78.247000 1025 3536 1 chr1D.!!$F1 2511
23 TraesCS5A01G365400 chr1B 8817269 8819826 2557 True 1786.0 1786 79.523000 1087 3654 1 chr1B.!!$R1 2567
24 TraesCS5A01G365400 chr1B 548197399 548199863 2464 True 1618.0 1618 78.941000 1025 3510 1 chr1B.!!$R2 2485

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
560 563 0.738762 CACGATGTGAGCACAGAGGG 60.739 60.000 9.37 3.12 45.48 4.30 F
1050 5069 0.033991 TCCTCCTTCTCACTCCTCGG 60.034 60.000 0.00 0.00 0.00 4.63 F
1535 5620 1.134670 GCAGAGCTTCGACTACCCAAT 60.135 52.381 0.00 0.00 0.00 3.16 F
2988 11910 1.032014 AAAGTTGCCGTGAGTGCATT 58.968 45.000 0.00 0.00 37.19 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1535 5620 0.175760 GCCAGGAAGCACGACATCTA 59.824 55.0 0.00 0.00 0.0 1.98 R
2064 6155 0.457035 CAAACTCCCAATCATGCGGG 59.543 55.0 8.07 8.07 44.6 6.13 R
3432 12366 0.037697 CAACTTCACCCATCGTCGGA 60.038 55.0 0.00 0.00 0.0 4.55 R
4244 13336 0.105453 AGTGTGTCAGAGGGTCCACT 60.105 55.0 0.00 0.00 0.0 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 7.362660 GCACATACTCCTATACGAATATGTCCA 60.363 40.741 3.74 0.00 32.35 4.02
32 33 7.968956 CACATACTCCTATACGAATATGTCCAC 59.031 40.741 3.74 0.00 32.35 4.02
50 52 6.010850 TGTCCACAGTAATTGTCTCTACTCT 58.989 40.000 0.00 0.00 38.16 3.24
140 142 1.742411 GCGACATACTAGCTTGGCCAA 60.742 52.381 19.25 19.25 0.00 4.52
142 144 1.933853 GACATACTAGCTTGGCCAACG 59.066 52.381 16.05 12.18 0.00 4.10
196 198 7.060600 TCATCGTGATCACAAAAACTACATC 57.939 36.000 24.93 0.00 0.00 3.06
227 229 4.704540 ACCATCTCAATTACGATTTGCCAA 59.295 37.500 0.00 0.00 0.00 4.52
230 232 6.757947 CCATCTCAATTACGATTTGCCAAATT 59.242 34.615 3.82 0.00 0.00 1.82
237 239 7.581213 ATTACGATTTGCCAAATTATCCTCA 57.419 32.000 3.82 0.00 0.00 3.86
251 253 5.779241 TTATCCTCAATCAGAACCACCTT 57.221 39.130 0.00 0.00 0.00 3.50
269 271 2.101249 CCTTCTTGTGCACAAACCACAT 59.899 45.455 30.62 0.00 42.23 3.21
272 274 2.757314 TCTTGTGCACAAACCACATGAA 59.243 40.909 30.62 7.03 41.46 2.57
280 282 4.439974 GCACAAACCACATGAAGACTTTGA 60.440 41.667 0.00 0.00 0.00 2.69
284 286 6.322201 ACAAACCACATGAAGACTTTGATTCT 59.678 34.615 0.00 0.00 0.00 2.40
311 313 4.321899 CGGGATTTTGATCTTCCAAAGCAA 60.322 41.667 0.00 0.00 37.34 3.91
316 318 1.806542 TGATCTTCCAAAGCAACGAGC 59.193 47.619 0.00 0.00 46.19 5.03
464 466 1.064611 TCGAACCCTCTTCCTCTCGAT 60.065 52.381 0.00 0.00 30.94 3.59
560 563 0.738762 CACGATGTGAGCACAGAGGG 60.739 60.000 9.37 3.12 45.48 4.30
837 4833 7.341512 TGATTAATGGTGCCTTGTATCAATTGA 59.658 33.333 11.26 11.26 0.00 2.57
850 4846 7.864108 TGTATCAATTGAAATACTGTCCCAG 57.136 36.000 13.09 0.00 37.52 4.45
899 4897 2.079925 CCTTCAGCCAGTCTTTGTAGC 58.920 52.381 0.00 0.00 0.00 3.58
945 4943 7.159322 TCTTCAGAAGACATACTACTTCCAC 57.841 40.000 8.95 0.00 42.09 4.02
1003 5010 1.338105 CCACGCACTTCTCCTCAATGA 60.338 52.381 0.00 0.00 0.00 2.57
1022 5032 0.983378 ACTCCCCTCCACATACTGCC 60.983 60.000 0.00 0.00 0.00 4.85
1038 5051 2.689034 CCCGGGCTTCTCCTCCTT 60.689 66.667 8.08 0.00 34.39 3.36
1050 5069 0.033991 TCCTCCTTCTCACTCCTCGG 60.034 60.000 0.00 0.00 0.00 4.63
1166 5194 1.303155 GCTTCTTCCAGCCAGCAGT 60.303 57.895 0.00 0.00 33.21 4.40
1202 5233 4.848562 TCAGTAAGTCGTCTCACAATGT 57.151 40.909 0.00 0.00 0.00 2.71
1309 5370 1.374947 CCCATCGTCCACCACAACT 59.625 57.895 0.00 0.00 0.00 3.16
1380 5444 1.857318 TAAACCATGCCGGCAACACG 61.857 55.000 36.33 22.20 39.03 4.49
1535 5620 1.134670 GCAGAGCTTCGACTACCCAAT 60.135 52.381 0.00 0.00 0.00 3.16
1749 5834 6.425721 CCACAACATCAGCAATGAATCTTTTT 59.574 34.615 6.14 0.00 38.83 1.94
1759 5844 5.654497 CAATGAATCTTTTTCCACTAGCCC 58.346 41.667 0.00 0.00 0.00 5.19
1909 6000 7.350382 ACTAGACATCTCTGGTCAGATAAAGA 58.650 38.462 0.00 0.00 32.99 2.52
1971 6062 1.561769 ATGCCCAACCAGACGATCCA 61.562 55.000 0.00 0.00 0.00 3.41
1998 6089 2.669569 CCTGCAACCTGTGGACCG 60.670 66.667 0.00 0.00 0.00 4.79
2138 6238 5.298527 CACCATTACATTGCACTCATGAGAT 59.701 40.000 29.27 9.25 0.00 2.75
2207 6307 4.930405 TCAATATCCGTACAACTCGCAAAA 59.070 37.500 0.00 0.00 0.00 2.44
2361 11259 2.439507 AGGCATTGATAACACCGGAGAT 59.560 45.455 9.46 0.00 0.00 2.75
2370 11268 2.969628 ACACCGGAGATCATGTTCTC 57.030 50.000 20.98 20.98 41.21 2.87
2454 11357 4.782019 TGTTGGAGTTGTTATTGCATCC 57.218 40.909 0.00 0.00 0.00 3.51
2523 11436 2.582052 TGGAGGAACAAATTCAAGCGT 58.418 42.857 0.00 0.00 36.46 5.07
2680 11593 4.101119 ACAGGGGATTATTAAGTGACTCGG 59.899 45.833 0.00 0.00 0.00 4.63
2764 11683 2.683152 GCTGAGGTGAGCTCAATTGGAT 60.683 50.000 20.19 0.35 35.95 3.41
2916 11838 2.092103 TGCCGCTACCCTAAATTGGAAT 60.092 45.455 0.00 0.00 0.00 3.01
2918 11840 4.139038 GCCGCTACCCTAAATTGGAATAA 58.861 43.478 0.00 0.00 0.00 1.40
2957 11879 5.141182 CCTAGGAGTTGCTAGAGGATTGTA 58.859 45.833 1.05 0.00 0.00 2.41
2988 11910 1.032014 AAAGTTGCCGTGAGTGCATT 58.968 45.000 0.00 0.00 37.19 3.56
3030 11952 5.555017 CCAGAGAACATATTGGTAGATGGG 58.445 45.833 0.00 0.00 0.00 4.00
3120 12042 5.412904 CCTGACAAGTTTTAGAGGAACCATC 59.587 44.000 0.00 0.00 0.00 3.51
3432 12366 6.017605 GCATCCAAGATAATGAGTTTGATCGT 60.018 38.462 0.00 0.00 0.00 3.73
3474 12408 2.022934 CGGGTTCTAGAGGGTCTACAC 58.977 57.143 0.00 0.00 0.00 2.90
3539 12473 4.768583 ACAAAACAATCTGGTGTTGCAAT 58.231 34.783 0.59 0.00 40.86 3.56
3540 12474 4.571580 ACAAAACAATCTGGTGTTGCAATG 59.428 37.500 0.59 0.00 40.86 2.82
3542 12476 5.528043 AAACAATCTGGTGTTGCAATGTA 57.472 34.783 0.59 0.00 40.86 2.29
3545 12479 6.832520 ACAATCTGGTGTTGCAATGTAATA 57.167 33.333 0.59 0.00 0.00 0.98
3546 12480 7.225784 ACAATCTGGTGTTGCAATGTAATAA 57.774 32.000 0.59 0.00 0.00 1.40
3551 12485 8.574251 TCTGGTGTTGCAATGTAATAATAAGT 57.426 30.769 0.59 0.00 0.00 2.24
3552 12486 9.019656 TCTGGTGTTGCAATGTAATAATAAGTT 57.980 29.630 0.59 0.00 0.00 2.66
3553 12487 8.978564 TGGTGTTGCAATGTAATAATAAGTTG 57.021 30.769 0.59 0.00 0.00 3.16
3558 12498 9.139174 GTTGCAATGTAATAATAAGTTGTTGCT 57.861 29.630 0.59 0.00 39.88 3.91
3662 12609 7.101054 TGTAGTTGATAATTAGTCGCCTTGTT 58.899 34.615 0.00 0.00 0.00 2.83
3663 12610 8.252417 TGTAGTTGATAATTAGTCGCCTTGTTA 58.748 33.333 0.00 0.00 0.00 2.41
3664 12611 7.535489 AGTTGATAATTAGTCGCCTTGTTAC 57.465 36.000 0.00 0.00 0.00 2.50
3691 12670 4.632251 TCATTGCAGCAAAATATGGCAAAG 59.368 37.500 12.97 0.00 46.15 2.77
3701 12680 8.488668 AGCAAAATATGGCAAAGGATAGAAATT 58.511 29.630 0.00 0.00 0.00 1.82
3738 12718 6.770303 TGTGTGTGATTATTTTCAGTCTGGAA 59.230 34.615 0.00 0.00 0.00 3.53
3791 12775 3.554960 CCAGGAATAGCTATTAGCACGCA 60.555 47.826 18.87 0.74 45.56 5.24
3830 12919 9.550406 CATGCATGGATTAAATATTTGGAAACT 57.450 29.630 19.40 0.00 0.00 2.66
3832 12921 7.986320 TGCATGGATTAAATATTTGGAAACTGG 59.014 33.333 11.05 0.00 0.00 4.00
3844 12933 1.461849 AAACTGGGGTCCGTGGGTA 60.462 57.895 0.00 0.00 0.00 3.69
3895 12984 6.673839 AGGCTCTATAATTACCTGGTCTTC 57.326 41.667 0.63 0.00 0.00 2.87
3936 13028 4.628333 CCAATCATGTCATCTTGGTTTTGC 59.372 41.667 12.67 0.00 34.69 3.68
3971 13063 1.352622 TTTGTGGGGTGCCAGTCTCT 61.353 55.000 0.00 0.00 0.00 3.10
3978 13070 2.623502 GGGGTGCCAGTCTCTAACTCTA 60.624 54.545 0.00 0.00 35.45 2.43
3987 13079 6.351456 GCCAGTCTCTAACTCTAAACTCCAAT 60.351 42.308 0.00 0.00 35.45 3.16
4014 13106 4.960938 AGCAGATCTTTGTCAGTGTACAA 58.039 39.130 0.00 4.62 37.58 2.41
4015 13107 5.368145 AGCAGATCTTTGTCAGTGTACAAA 58.632 37.500 15.45 15.45 44.81 2.83
4019 13111 7.042051 GCAGATCTTTGTCAGTGTACAAAACTA 60.042 37.037 16.42 9.32 45.88 2.24
4027 13119 7.205297 TGTCAGTGTACAAAACTACCTCTAAC 58.795 38.462 0.00 0.00 0.00 2.34
4028 13120 7.147863 TGTCAGTGTACAAAACTACCTCTAACA 60.148 37.037 0.00 0.00 0.00 2.41
4040 13132 5.945191 ACTACCTCTAACACACTACTTCCTC 59.055 44.000 0.00 0.00 0.00 3.71
4041 13133 4.087907 ACCTCTAACACACTACTTCCTCC 58.912 47.826 0.00 0.00 0.00 4.30
4042 13134 3.128938 CCTCTAACACACTACTTCCTCCG 59.871 52.174 0.00 0.00 0.00 4.63
4043 13135 3.757493 CTCTAACACACTACTTCCTCCGT 59.243 47.826 0.00 0.00 0.00 4.69
4044 13136 4.147321 TCTAACACACTACTTCCTCCGTT 58.853 43.478 0.00 0.00 0.00 4.44
4045 13137 3.382048 AACACACTACTTCCTCCGTTC 57.618 47.619 0.00 0.00 0.00 3.95
4046 13138 1.617357 ACACACTACTTCCTCCGTTCC 59.383 52.381 0.00 0.00 0.00 3.62
4047 13139 1.893801 CACACTACTTCCTCCGTTCCT 59.106 52.381 0.00 0.00 0.00 3.36
4048 13140 3.087031 CACACTACTTCCTCCGTTCCTA 58.913 50.000 0.00 0.00 0.00 2.94
4049 13141 3.508793 CACACTACTTCCTCCGTTCCTAA 59.491 47.826 0.00 0.00 0.00 2.69
4050 13142 4.021719 CACACTACTTCCTCCGTTCCTAAA 60.022 45.833 0.00 0.00 0.00 1.85
4051 13143 4.776308 ACACTACTTCCTCCGTTCCTAAAT 59.224 41.667 0.00 0.00 0.00 1.40
4052 13144 5.954150 ACACTACTTCCTCCGTTCCTAAATA 59.046 40.000 0.00 0.00 0.00 1.40
4053 13145 6.610425 ACACTACTTCCTCCGTTCCTAAATAT 59.390 38.462 0.00 0.00 0.00 1.28
4054 13146 7.125356 ACACTACTTCCTCCGTTCCTAAATATT 59.875 37.037 0.00 0.00 0.00 1.28
4055 13147 7.985752 CACTACTTCCTCCGTTCCTAAATATTT 59.014 37.037 5.89 5.89 0.00 1.40
4056 13148 7.985752 ACTACTTCCTCCGTTCCTAAATATTTG 59.014 37.037 11.05 1.40 0.00 2.32
4057 13149 6.718294 ACTTCCTCCGTTCCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
4058 13150 6.822170 ACTTCCTCCGTTCCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
4059 13151 6.555463 TCCTCCGTTCCTAAATATTTGTCT 57.445 37.500 11.05 0.00 0.00 3.41
4060 13152 6.954232 TCCTCCGTTCCTAAATATTTGTCTT 58.046 36.000 11.05 0.00 0.00 3.01
4061 13153 7.399634 TCCTCCGTTCCTAAATATTTGTCTTT 58.600 34.615 11.05 0.00 0.00 2.52
4062 13154 7.551617 TCCTCCGTTCCTAAATATTTGTCTTTC 59.448 37.037 11.05 0.00 0.00 2.62
4063 13155 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
4064 13156 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
4065 13157 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
4066 13158 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
4090 13182 9.737427 AGAGATTTCAATAAGTGACTACATACG 57.263 33.333 0.00 0.00 35.39 3.06
4091 13183 8.873215 AGATTTCAATAAGTGACTACATACGG 57.127 34.615 0.00 0.00 35.39 4.02
4092 13184 8.692710 AGATTTCAATAAGTGACTACATACGGA 58.307 33.333 0.00 0.00 35.39 4.69
4093 13185 8.873215 ATTTCAATAAGTGACTACATACGGAG 57.127 34.615 0.00 0.00 35.39 4.63
4094 13186 5.828747 TCAATAAGTGACTACATACGGAGC 58.171 41.667 0.00 0.00 0.00 4.70
4095 13187 5.358725 TCAATAAGTGACTACATACGGAGCA 59.641 40.000 0.00 0.00 0.00 4.26
4096 13188 5.847111 ATAAGTGACTACATACGGAGCAA 57.153 39.130 0.00 0.00 0.00 3.91
4097 13189 4.530710 AAGTGACTACATACGGAGCAAA 57.469 40.909 0.00 0.00 0.00 3.68
4098 13190 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
4099 13191 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
4100 13192 6.216801 AGTGACTACATACGGAGCAAAATA 57.783 37.500 0.00 0.00 0.00 1.40
4101 13193 6.636705 AGTGACTACATACGGAGCAAAATAA 58.363 36.000 0.00 0.00 0.00 1.40
4102 13194 6.757010 AGTGACTACATACGGAGCAAAATAAG 59.243 38.462 0.00 0.00 0.00 1.73
4103 13195 6.534079 GTGACTACATACGGAGCAAAATAAGT 59.466 38.462 0.00 0.00 0.00 2.24
4104 13196 6.533723 TGACTACATACGGAGCAAAATAAGTG 59.466 38.462 0.00 0.00 0.00 3.16
4105 13197 6.636705 ACTACATACGGAGCAAAATAAGTGA 58.363 36.000 0.00 0.00 0.00 3.41
4106 13198 7.101054 ACTACATACGGAGCAAAATAAGTGAA 58.899 34.615 0.00 0.00 0.00 3.18
4107 13199 7.769044 ACTACATACGGAGCAAAATAAGTGAAT 59.231 33.333 0.00 0.00 0.00 2.57
4108 13200 7.016361 ACATACGGAGCAAAATAAGTGAATC 57.984 36.000 0.00 0.00 0.00 2.52
4109 13201 6.823689 ACATACGGAGCAAAATAAGTGAATCT 59.176 34.615 0.00 0.00 0.00 2.40
4110 13202 7.985184 ACATACGGAGCAAAATAAGTGAATCTA 59.015 33.333 0.00 0.00 0.00 1.98
4111 13203 6.663944 ACGGAGCAAAATAAGTGAATCTAC 57.336 37.500 0.00 0.00 0.00 2.59
4112 13204 6.407202 ACGGAGCAAAATAAGTGAATCTACT 58.593 36.000 0.00 0.00 0.00 2.57
4113 13205 6.535508 ACGGAGCAAAATAAGTGAATCTACTC 59.464 38.462 0.00 0.00 0.00 2.59
4114 13206 6.758886 CGGAGCAAAATAAGTGAATCTACTCT 59.241 38.462 0.00 0.00 0.00 3.24
4115 13207 7.921214 CGGAGCAAAATAAGTGAATCTACTCTA 59.079 37.037 0.00 0.00 0.00 2.43
4116 13208 9.601217 GGAGCAAAATAAGTGAATCTACTCTAA 57.399 33.333 0.00 0.00 0.00 2.10
4147 13239 9.901172 TGTCTATATACATCCGTATGTGATAGT 57.099 33.333 17.08 3.55 45.99 2.12
4156 13248 9.607988 ACATCCGTATGTGATAGTTTATTTGAA 57.392 29.630 0.00 0.00 44.79 2.69
4190 13282 9.855021 AAAAGACAAATATTTAGAAACGGATGG 57.145 29.630 0.00 0.00 0.00 3.51
4191 13283 8.801882 AAGACAAATATTTAGAAACGGATGGA 57.198 30.769 0.00 0.00 0.00 3.41
4192 13284 8.438676 AGACAAATATTTAGAAACGGATGGAG 57.561 34.615 0.00 0.00 0.00 3.86
4193 13285 8.047310 AGACAAATATTTAGAAACGGATGGAGT 58.953 33.333 0.00 0.00 0.00 3.85
4194 13286 9.321562 GACAAATATTTAGAAACGGATGGAGTA 57.678 33.333 0.00 0.00 0.00 2.59
4195 13287 9.106070 ACAAATATTTAGAAACGGATGGAGTAC 57.894 33.333 0.00 0.00 0.00 2.73
4196 13288 9.326413 CAAATATTTAGAAACGGATGGAGTACT 57.674 33.333 0.00 0.00 0.00 2.73
4197 13289 9.901172 AAATATTTAGAAACGGATGGAGTACTT 57.099 29.630 0.00 0.00 0.00 2.24
4198 13290 9.901172 AATATTTAGAAACGGATGGAGTACTTT 57.099 29.630 0.00 0.00 0.00 2.66
4199 13291 7.845066 ATTTAGAAACGGATGGAGTACTTTC 57.155 36.000 0.00 0.00 0.00 2.62
4200 13292 6.600882 TTAGAAACGGATGGAGTACTTTCT 57.399 37.500 0.00 2.13 0.00 2.52
4201 13293 5.485209 AGAAACGGATGGAGTACTTTCTT 57.515 39.130 0.00 0.00 0.00 2.52
4202 13294 5.866207 AGAAACGGATGGAGTACTTTCTTT 58.134 37.500 0.00 0.00 0.00 2.52
4203 13295 5.701290 AGAAACGGATGGAGTACTTTCTTTG 59.299 40.000 0.00 0.00 0.00 2.77
4204 13296 4.884668 ACGGATGGAGTACTTTCTTTGA 57.115 40.909 0.00 0.00 0.00 2.69
4205 13297 4.822026 ACGGATGGAGTACTTTCTTTGAG 58.178 43.478 0.00 0.00 0.00 3.02
4206 13298 4.283722 ACGGATGGAGTACTTTCTTTGAGT 59.716 41.667 0.00 0.00 0.00 3.41
4207 13299 5.221661 ACGGATGGAGTACTTTCTTTGAGTT 60.222 40.000 0.00 0.00 0.00 3.01
4208 13300 5.120830 CGGATGGAGTACTTTCTTTGAGTTG 59.879 44.000 0.00 0.00 0.00 3.16
4209 13301 5.998363 GGATGGAGTACTTTCTTTGAGTTGT 59.002 40.000 0.00 0.00 0.00 3.32
4210 13302 6.486993 GGATGGAGTACTTTCTTTGAGTTGTT 59.513 38.462 0.00 0.00 0.00 2.83
4211 13303 7.013369 GGATGGAGTACTTTCTTTGAGTTGTTT 59.987 37.037 0.00 0.00 0.00 2.83
4212 13304 7.083875 TGGAGTACTTTCTTTGAGTTGTTTG 57.916 36.000 0.00 0.00 0.00 2.93
4213 13305 6.657541 TGGAGTACTTTCTTTGAGTTGTTTGT 59.342 34.615 0.00 0.00 0.00 2.83
4214 13306 7.175990 TGGAGTACTTTCTTTGAGTTGTTTGTT 59.824 33.333 0.00 0.00 0.00 2.83
4215 13307 7.484959 GGAGTACTTTCTTTGAGTTGTTTGTTG 59.515 37.037 0.00 0.00 0.00 3.33
4216 13308 7.882179 AGTACTTTCTTTGAGTTGTTTGTTGT 58.118 30.769 0.00 0.00 0.00 3.32
4217 13309 8.357402 AGTACTTTCTTTGAGTTGTTTGTTGTT 58.643 29.630 0.00 0.00 0.00 2.83
4218 13310 8.974408 GTACTTTCTTTGAGTTGTTTGTTGTTT 58.026 29.630 0.00 0.00 0.00 2.83
4219 13311 8.432110 ACTTTCTTTGAGTTGTTTGTTGTTTT 57.568 26.923 0.00 0.00 0.00 2.43
4220 13312 8.888716 ACTTTCTTTGAGTTGTTTGTTGTTTTT 58.111 25.926 0.00 0.00 0.00 1.94
4221 13313 9.157259 CTTTCTTTGAGTTGTTTGTTGTTTTTG 57.843 29.630 0.00 0.00 0.00 2.44
4222 13314 8.425577 TTCTTTGAGTTGTTTGTTGTTTTTGA 57.574 26.923 0.00 0.00 0.00 2.69
4223 13315 8.071122 TCTTTGAGTTGTTTGTTGTTTTTGAG 57.929 30.769 0.00 0.00 0.00 3.02
4224 13316 7.923344 TCTTTGAGTTGTTTGTTGTTTTTGAGA 59.077 29.630 0.00 0.00 0.00 3.27
4225 13317 8.600449 TTTGAGTTGTTTGTTGTTTTTGAGAT 57.400 26.923 0.00 0.00 0.00 2.75
4226 13318 9.698309 TTTGAGTTGTTTGTTGTTTTTGAGATA 57.302 25.926 0.00 0.00 0.00 1.98
4227 13319 8.909708 TGAGTTGTTTGTTGTTTTTGAGATAG 57.090 30.769 0.00 0.00 0.00 2.08
4228 13320 7.487829 TGAGTTGTTTGTTGTTTTTGAGATAGC 59.512 33.333 0.00 0.00 0.00 2.97
4229 13321 7.547227 AGTTGTTTGTTGTTTTTGAGATAGCT 58.453 30.769 0.00 0.00 0.00 3.32
4230 13322 8.682710 AGTTGTTTGTTGTTTTTGAGATAGCTA 58.317 29.630 0.00 0.00 0.00 3.32
4231 13323 8.743099 GTTGTTTGTTGTTTTTGAGATAGCTAC 58.257 33.333 0.00 0.00 0.00 3.58
4232 13324 7.422399 TGTTTGTTGTTTTTGAGATAGCTACC 58.578 34.615 0.00 0.00 0.00 3.18
4233 13325 6.569179 TTGTTGTTTTTGAGATAGCTACCC 57.431 37.500 0.00 0.00 0.00 3.69
4234 13326 5.626142 TGTTGTTTTTGAGATAGCTACCCA 58.374 37.500 0.00 0.00 0.00 4.51
4235 13327 5.472137 TGTTGTTTTTGAGATAGCTACCCAC 59.528 40.000 0.00 0.00 0.00 4.61
4236 13328 5.499004 TGTTTTTGAGATAGCTACCCACT 57.501 39.130 0.00 0.00 0.00 4.00
4237 13329 5.876357 TGTTTTTGAGATAGCTACCCACTT 58.124 37.500 0.00 0.00 0.00 3.16
4238 13330 7.011499 TGTTTTTGAGATAGCTACCCACTTA 57.989 36.000 0.00 0.00 0.00 2.24
4239 13331 7.630082 TGTTTTTGAGATAGCTACCCACTTAT 58.370 34.615 0.00 0.00 0.00 1.73
4240 13332 8.107095 TGTTTTTGAGATAGCTACCCACTTATT 58.893 33.333 0.00 0.00 0.00 1.40
4241 13333 8.957466 GTTTTTGAGATAGCTACCCACTTATTT 58.043 33.333 0.00 0.00 0.00 1.40
4242 13334 8.732746 TTTTGAGATAGCTACCCACTTATTTC 57.267 34.615 0.00 0.00 0.00 2.17
4243 13335 7.432148 TTGAGATAGCTACCCACTTATTTCA 57.568 36.000 0.00 0.00 0.00 2.69
4244 13336 7.432148 TGAGATAGCTACCCACTTATTTCAA 57.568 36.000 0.00 0.00 0.00 2.69
4245 13337 7.500992 TGAGATAGCTACCCACTTATTTCAAG 58.499 38.462 0.00 0.00 0.00 3.02
4246 13338 7.125811 TGAGATAGCTACCCACTTATTTCAAGT 59.874 37.037 0.00 0.00 0.00 3.16
4247 13339 7.275920 AGATAGCTACCCACTTATTTCAAGTG 58.724 38.462 9.63 9.63 45.33 3.16
4255 13347 4.911390 CACTTATTTCAAGTGGACCCTCT 58.089 43.478 8.88 0.00 42.83 3.69
4256 13348 4.697352 CACTTATTTCAAGTGGACCCTCTG 59.303 45.833 8.88 0.00 42.83 3.35
4257 13349 4.597507 ACTTATTTCAAGTGGACCCTCTGA 59.402 41.667 0.00 0.00 0.00 3.27
4258 13350 2.930826 TTTCAAGTGGACCCTCTGAC 57.069 50.000 0.00 0.00 0.00 3.51
4259 13351 1.801242 TTCAAGTGGACCCTCTGACA 58.199 50.000 0.00 0.00 0.00 3.58
4260 13352 1.048601 TCAAGTGGACCCTCTGACAC 58.951 55.000 0.00 0.00 0.00 3.67
4261 13353 0.758734 CAAGTGGACCCTCTGACACA 59.241 55.000 0.00 0.00 36.35 3.72
4262 13354 0.759346 AAGTGGACCCTCTGACACAC 59.241 55.000 0.00 0.00 36.35 3.82
4263 13355 0.105453 AGTGGACCCTCTGACACACT 60.105 55.000 0.00 0.00 36.35 3.55
4264 13356 1.147191 AGTGGACCCTCTGACACACTA 59.853 52.381 0.00 0.00 37.41 2.74
4265 13357 1.272769 GTGGACCCTCTGACACACTAC 59.727 57.143 0.00 0.00 34.16 2.73
4266 13358 1.147191 TGGACCCTCTGACACACTACT 59.853 52.381 0.00 0.00 0.00 2.57
4267 13359 2.249139 GGACCCTCTGACACACTACTT 58.751 52.381 0.00 0.00 0.00 2.24
4268 13360 2.028930 GGACCCTCTGACACACTACTTG 60.029 54.545 0.00 0.00 0.00 3.16
4269 13361 2.891580 GACCCTCTGACACACTACTTGA 59.108 50.000 0.00 0.00 0.00 3.02
4270 13362 2.628657 ACCCTCTGACACACTACTTGAC 59.371 50.000 0.00 0.00 0.00 3.18
4271 13363 2.351835 CCCTCTGACACACTACTTGACG 60.352 54.545 0.00 0.00 0.00 4.35
4272 13364 2.552743 CCTCTGACACACTACTTGACGA 59.447 50.000 0.00 0.00 0.00 4.20
4273 13365 3.191581 CCTCTGACACACTACTTGACGAT 59.808 47.826 0.00 0.00 0.00 3.73
4274 13366 4.160736 TCTGACACACTACTTGACGATG 57.839 45.455 0.00 0.00 0.00 3.84
4275 13367 2.663602 CTGACACACTACTTGACGATGC 59.336 50.000 0.00 0.00 0.00 3.91
4276 13368 1.993370 GACACACTACTTGACGATGCC 59.007 52.381 0.00 0.00 0.00 4.40
4277 13369 1.618837 ACACACTACTTGACGATGCCT 59.381 47.619 0.00 0.00 0.00 4.75
4278 13370 2.037251 ACACACTACTTGACGATGCCTT 59.963 45.455 0.00 0.00 0.00 4.35
4279 13371 2.413112 CACACTACTTGACGATGCCTTG 59.587 50.000 0.00 0.00 0.00 3.61
4280 13372 2.299013 ACACTACTTGACGATGCCTTGA 59.701 45.455 0.00 0.00 0.00 3.02
4281 13373 2.668457 CACTACTTGACGATGCCTTGAC 59.332 50.000 0.00 0.00 0.00 3.18
4282 13374 2.299013 ACTACTTGACGATGCCTTGACA 59.701 45.455 0.00 0.00 0.00 3.58
4283 13375 1.800805 ACTTGACGATGCCTTGACAG 58.199 50.000 0.00 0.00 0.00 3.51
4284 13376 0.445436 CTTGACGATGCCTTGACAGC 59.555 55.000 0.00 0.00 0.00 4.40
4285 13377 0.955428 TTGACGATGCCTTGACAGCC 60.955 55.000 0.00 0.00 0.00 4.85
4286 13378 1.375908 GACGATGCCTTGACAGCCA 60.376 57.895 0.00 0.00 0.00 4.75
4287 13379 1.364626 GACGATGCCTTGACAGCCAG 61.365 60.000 0.00 0.00 0.00 4.85
4288 13380 2.758089 CGATGCCTTGACAGCCAGC 61.758 63.158 0.00 0.00 0.00 4.85
4289 13381 1.676635 GATGCCTTGACAGCCAGCA 60.677 57.895 0.00 0.00 37.94 4.41
4290 13382 1.654954 GATGCCTTGACAGCCAGCAG 61.655 60.000 0.00 0.00 36.80 4.24
4291 13383 2.033141 GCCTTGACAGCCAGCAGA 59.967 61.111 0.00 0.00 0.00 4.26
4292 13384 1.601759 GCCTTGACAGCCAGCAGAA 60.602 57.895 0.00 0.00 0.00 3.02
4293 13385 0.964358 GCCTTGACAGCCAGCAGAAT 60.964 55.000 0.00 0.00 0.00 2.40
4294 13386 1.542492 CCTTGACAGCCAGCAGAATT 58.458 50.000 0.00 0.00 0.00 2.17
4295 13387 1.201647 CCTTGACAGCCAGCAGAATTG 59.798 52.381 0.00 0.00 0.00 2.32
4304 13396 4.179579 GCAGAATTGCGGGGCGTC 62.180 66.667 0.00 0.00 41.13 5.19
4305 13397 3.508840 CAGAATTGCGGGGCGTCC 61.509 66.667 0.00 0.00 0.00 4.79
4316 13408 4.357947 GGCGTCCGAGCTCACACA 62.358 66.667 15.40 0.00 37.29 3.72
4317 13409 2.355837 GCGTCCGAGCTCACACAA 60.356 61.111 15.40 0.00 0.00 3.33
4318 13410 1.954146 GCGTCCGAGCTCACACAAA 60.954 57.895 15.40 0.00 0.00 2.83
4319 13411 1.495584 GCGTCCGAGCTCACACAAAA 61.496 55.000 15.40 0.00 0.00 2.44
4320 13412 1.148310 CGTCCGAGCTCACACAAAAT 58.852 50.000 15.40 0.00 0.00 1.82
4321 13413 1.136252 CGTCCGAGCTCACACAAAATG 60.136 52.381 15.40 0.00 0.00 2.32
4322 13414 1.873591 GTCCGAGCTCACACAAAATGT 59.126 47.619 15.40 0.00 44.81 2.71
4323 13415 3.064207 GTCCGAGCTCACACAAAATGTA 58.936 45.455 15.40 0.00 40.64 2.29
4324 13416 3.496884 GTCCGAGCTCACACAAAATGTAA 59.503 43.478 15.40 0.00 40.64 2.41
4325 13417 4.024387 GTCCGAGCTCACACAAAATGTAAA 60.024 41.667 15.40 0.00 40.64 2.01
4326 13418 4.024387 TCCGAGCTCACACAAAATGTAAAC 60.024 41.667 15.40 0.00 40.64 2.01
4327 13419 4.260990 CCGAGCTCACACAAAATGTAAACA 60.261 41.667 15.40 0.00 40.64 2.83
4328 13420 4.905866 CGAGCTCACACAAAATGTAAACAG 59.094 41.667 15.40 0.00 40.64 3.16
4329 13421 4.610945 AGCTCACACAAAATGTAAACAGC 58.389 39.130 0.00 0.00 40.64 4.40
4330 13422 3.421888 GCTCACACAAAATGTAAACAGCG 59.578 43.478 0.00 0.00 40.64 5.18
4331 13423 3.958704 TCACACAAAATGTAAACAGCGG 58.041 40.909 0.00 0.00 40.64 5.52
4332 13424 2.470999 CACACAAAATGTAAACAGCGGC 59.529 45.455 0.00 0.00 40.64 6.53
4333 13425 1.713404 CACAAAATGTAAACAGCGGCG 59.287 47.619 0.51 0.51 0.00 6.46
4334 13426 1.604755 ACAAAATGTAAACAGCGGCGA 59.395 42.857 12.98 0.00 0.00 5.54
4335 13427 1.976045 CAAAATGTAAACAGCGGCGAC 59.024 47.619 12.98 1.23 0.00 5.19
4347 13439 3.263941 GGCGACGAAGGCAAACAT 58.736 55.556 0.00 0.00 36.61 2.71
4348 13440 1.154225 GGCGACGAAGGCAAACATG 60.154 57.895 0.00 0.00 36.61 3.21
4349 13441 1.573829 GGCGACGAAGGCAAACATGA 61.574 55.000 0.00 0.00 36.61 3.07
4350 13442 0.447801 GCGACGAAGGCAAACATGAT 59.552 50.000 0.00 0.00 0.00 2.45
4351 13443 1.529826 GCGACGAAGGCAAACATGATC 60.530 52.381 0.00 0.00 0.00 2.92
4352 13444 1.731709 CGACGAAGGCAAACATGATCA 59.268 47.619 0.00 0.00 0.00 2.92
4353 13445 2.474526 CGACGAAGGCAAACATGATCAC 60.475 50.000 0.00 0.00 0.00 3.06
4354 13446 2.483877 GACGAAGGCAAACATGATCACA 59.516 45.455 0.00 0.00 0.00 3.58
4355 13447 3.084039 ACGAAGGCAAACATGATCACAT 58.916 40.909 0.00 0.00 37.19 3.21
4364 13456 3.002277 ATGATCACATGAGGCAGCG 57.998 52.632 0.00 0.00 35.21 5.18
4365 13457 0.534427 ATGATCACATGAGGCAGCGG 60.534 55.000 0.00 0.00 35.21 5.52
4366 13458 1.890979 GATCACATGAGGCAGCGGG 60.891 63.158 0.00 0.00 0.00 6.13
4367 13459 4.783621 TCACATGAGGCAGCGGGC 62.784 66.667 1.08 1.08 43.74 6.13
4373 13465 4.537433 GAGGCAGCGGGCGAGAAT 62.537 66.667 4.48 0.00 46.16 2.40
4374 13466 4.101448 AGGCAGCGGGCGAGAATT 62.101 61.111 4.48 0.00 46.16 2.17
4375 13467 3.880846 GGCAGCGGGCGAGAATTG 61.881 66.667 0.00 0.00 46.16 2.32
4385 13477 1.717937 CGAGAATTGCAAGGGCTCG 59.282 57.895 24.21 24.21 41.77 5.03
4386 13478 1.709147 CGAGAATTGCAAGGGCTCGG 61.709 60.000 27.13 15.87 43.25 4.63
4387 13479 1.379044 AGAATTGCAAGGGCTCGGG 60.379 57.895 4.94 0.00 41.91 5.14
4388 13480 3.068729 GAATTGCAAGGGCTCGGGC 62.069 63.158 4.94 0.00 41.91 6.13
4389 13481 3.884704 AATTGCAAGGGCTCGGGCA 62.885 57.895 10.74 0.74 41.91 5.36
4404 13496 2.669878 GGCAGCCCCATTTTTCTCA 58.330 52.632 0.00 0.00 0.00 3.27
4405 13497 0.247460 GGCAGCCCCATTTTTCTCAC 59.753 55.000 0.00 0.00 0.00 3.51
4406 13498 0.109132 GCAGCCCCATTTTTCTCACG 60.109 55.000 0.00 0.00 0.00 4.35
4407 13499 0.527565 CAGCCCCATTTTTCTCACGG 59.472 55.000 0.00 0.00 0.00 4.94
4408 13500 0.611896 AGCCCCATTTTTCTCACGGG 60.612 55.000 0.00 0.00 36.59 5.28
4409 13501 1.890174 CCCCATTTTTCTCACGGGC 59.110 57.895 0.00 0.00 35.40 6.13
4410 13502 0.897863 CCCCATTTTTCTCACGGGCA 60.898 55.000 0.00 0.00 35.40 5.36
4411 13503 0.965439 CCCATTTTTCTCACGGGCAA 59.035 50.000 0.00 0.00 0.00 4.52
4412 13504 1.067635 CCCATTTTTCTCACGGGCAAG 60.068 52.381 0.00 0.00 0.00 4.01
4413 13505 1.885887 CCATTTTTCTCACGGGCAAGA 59.114 47.619 0.00 0.00 0.00 3.02
4414 13506 2.095059 CCATTTTTCTCACGGGCAAGAG 60.095 50.000 0.00 0.00 0.00 2.85
4415 13507 2.631160 TTTTTCTCACGGGCAAGAGA 57.369 45.000 0.00 0.00 39.01 3.10
4416 13508 2.631160 TTTTCTCACGGGCAAGAGAA 57.369 45.000 10.26 10.26 46.09 2.87
4417 13509 2.859165 TTTCTCACGGGCAAGAGAAT 57.141 45.000 13.71 0.00 46.72 2.40
4418 13510 2.099141 TTCTCACGGGCAAGAGAATG 57.901 50.000 10.26 0.00 43.74 2.67
4419 13511 1.266178 TCTCACGGGCAAGAGAATGA 58.734 50.000 1.04 0.00 37.91 2.57
4420 13512 1.205655 TCTCACGGGCAAGAGAATGAG 59.794 52.381 1.04 0.00 37.91 2.90
4421 13513 1.205655 CTCACGGGCAAGAGAATGAGA 59.794 52.381 0.00 0.00 36.50 3.27
4422 13514 1.623311 TCACGGGCAAGAGAATGAGAA 59.377 47.619 0.00 0.00 0.00 2.87
4423 13515 2.237143 TCACGGGCAAGAGAATGAGAAT 59.763 45.455 0.00 0.00 0.00 2.40
4424 13516 3.012518 CACGGGCAAGAGAATGAGAATT 58.987 45.455 0.00 0.00 0.00 2.17
4425 13517 3.012518 ACGGGCAAGAGAATGAGAATTG 58.987 45.455 0.00 0.00 0.00 2.32
4426 13518 3.012518 CGGGCAAGAGAATGAGAATTGT 58.987 45.455 0.00 0.00 0.00 2.71
4427 13519 3.064545 CGGGCAAGAGAATGAGAATTGTC 59.935 47.826 0.00 0.00 0.00 3.18
4428 13520 3.064545 GGGCAAGAGAATGAGAATTGTCG 59.935 47.826 0.00 0.00 0.00 4.35
4429 13521 3.064545 GGCAAGAGAATGAGAATTGTCGG 59.935 47.826 0.00 0.00 0.00 4.79
4430 13522 3.486542 GCAAGAGAATGAGAATTGTCGGC 60.487 47.826 0.00 0.00 0.00 5.54
4431 13523 2.911484 AGAGAATGAGAATTGTCGGCC 58.089 47.619 0.00 0.00 0.00 6.13
4432 13524 1.594862 GAGAATGAGAATTGTCGGCCG 59.405 52.381 22.12 22.12 0.00 6.13
4433 13525 0.657840 GAATGAGAATTGTCGGCCGG 59.342 55.000 27.83 6.80 0.00 6.13
4434 13526 0.748005 AATGAGAATTGTCGGCCGGG 60.748 55.000 27.83 0.00 0.00 5.73
4435 13527 2.513897 GAGAATTGTCGGCCGGGG 60.514 66.667 27.83 0.00 0.00 5.73
4436 13528 4.796495 AGAATTGTCGGCCGGGGC 62.796 66.667 27.83 16.41 41.06 5.80
4446 13538 3.161557 GCCGGGGCCTGATTATCT 58.838 61.111 15.75 0.00 34.56 1.98
4447 13539 1.456287 GCCGGGGCCTGATTATCTT 59.544 57.895 15.75 0.00 34.56 2.40
4448 13540 0.178990 GCCGGGGCCTGATTATCTTT 60.179 55.000 15.75 0.00 34.56 2.52
4449 13541 1.609208 CCGGGGCCTGATTATCTTTG 58.391 55.000 15.75 0.00 0.00 2.77
4450 13542 0.954452 CGGGGCCTGATTATCTTTGC 59.046 55.000 6.48 0.00 0.00 3.68
4451 13543 1.477558 CGGGGCCTGATTATCTTTGCT 60.478 52.381 6.48 0.00 0.00 3.91
4452 13544 2.670939 GGGGCCTGATTATCTTTGCTT 58.329 47.619 0.84 0.00 0.00 3.91
4453 13545 3.747388 CGGGGCCTGATTATCTTTGCTTA 60.747 47.826 6.48 0.00 0.00 3.09
4454 13546 4.215109 GGGGCCTGATTATCTTTGCTTAA 58.785 43.478 0.84 0.00 0.00 1.85
4455 13547 4.038042 GGGGCCTGATTATCTTTGCTTAAC 59.962 45.833 0.84 0.00 0.00 2.01
4456 13548 4.038042 GGGCCTGATTATCTTTGCTTAACC 59.962 45.833 0.84 0.00 0.00 2.85
4457 13549 4.889995 GGCCTGATTATCTTTGCTTAACCT 59.110 41.667 0.00 0.00 0.00 3.50
4458 13550 5.009110 GGCCTGATTATCTTTGCTTAACCTC 59.991 44.000 0.00 0.00 0.00 3.85
4459 13551 5.277538 GCCTGATTATCTTTGCTTAACCTCG 60.278 44.000 0.00 0.00 0.00 4.63
4460 13552 6.049149 CCTGATTATCTTTGCTTAACCTCGA 58.951 40.000 0.00 0.00 0.00 4.04
4461 13553 6.538742 CCTGATTATCTTTGCTTAACCTCGAA 59.461 38.462 0.00 0.00 0.00 3.71
4462 13554 7.065803 CCTGATTATCTTTGCTTAACCTCGAAA 59.934 37.037 0.00 0.00 0.00 3.46
4463 13555 8.330466 TGATTATCTTTGCTTAACCTCGAAAA 57.670 30.769 0.00 0.00 0.00 2.29
4464 13556 8.788806 TGATTATCTTTGCTTAACCTCGAAAAA 58.211 29.630 0.00 0.00 0.00 1.94
4465 13557 9.278734 GATTATCTTTGCTTAACCTCGAAAAAG 57.721 33.333 0.00 0.00 0.00 2.27
4466 13558 6.877611 ATCTTTGCTTAACCTCGAAAAAGA 57.122 33.333 0.00 0.00 36.81 2.52
4467 13559 6.687081 TCTTTGCTTAACCTCGAAAAAGAA 57.313 33.333 0.00 0.00 31.26 2.52
4468 13560 7.090953 TCTTTGCTTAACCTCGAAAAAGAAA 57.909 32.000 0.00 0.00 31.26 2.52
4469 13561 7.540299 TCTTTGCTTAACCTCGAAAAAGAAAA 58.460 30.769 0.00 0.00 31.26 2.29
4470 13562 8.194769 TCTTTGCTTAACCTCGAAAAAGAAAAT 58.805 29.630 0.00 0.00 31.26 1.82
4471 13563 8.710835 TTTGCTTAACCTCGAAAAAGAAAATT 57.289 26.923 0.00 0.00 0.00 1.82
4472 13564 9.804758 TTTGCTTAACCTCGAAAAAGAAAATTA 57.195 25.926 0.00 0.00 0.00 1.40
4473 13565 9.974980 TTGCTTAACCTCGAAAAAGAAAATTAT 57.025 25.926 0.00 0.00 0.00 1.28
4474 13566 9.974980 TGCTTAACCTCGAAAAAGAAAATTATT 57.025 25.926 0.00 0.00 0.00 1.40
4490 13582 9.836864 AGAAAATTATTTGTCTTTCCTTTTGCT 57.163 25.926 0.00 0.00 0.00 3.91
4493 13585 9.612066 AAATTATTTGTCTTTCCTTTTGCTTGA 57.388 25.926 0.00 0.00 0.00 3.02
4494 13586 8.593492 ATTATTTGTCTTTCCTTTTGCTTGAC 57.407 30.769 0.00 0.00 0.00 3.18
4495 13587 5.659440 TTTGTCTTTCCTTTTGCTTGACT 57.341 34.783 0.00 0.00 0.00 3.41
4496 13588 5.659440 TTGTCTTTCCTTTTGCTTGACTT 57.341 34.783 0.00 0.00 0.00 3.01
4497 13589 5.248870 TGTCTTTCCTTTTGCTTGACTTC 57.751 39.130 0.00 0.00 0.00 3.01
4498 13590 4.704540 TGTCTTTCCTTTTGCTTGACTTCA 59.295 37.500 0.00 0.00 0.00 3.02
4499 13591 5.184864 TGTCTTTCCTTTTGCTTGACTTCAA 59.815 36.000 0.00 0.00 0.00 2.69
4500 13592 5.516696 GTCTTTCCTTTTGCTTGACTTCAAC 59.483 40.000 0.00 0.00 0.00 3.18
4501 13593 4.385358 TTCCTTTTGCTTGACTTCAACC 57.615 40.909 0.00 0.00 0.00 3.77
4502 13594 2.693074 TCCTTTTGCTTGACTTCAACCC 59.307 45.455 0.00 0.00 0.00 4.11
4503 13595 2.224042 CCTTTTGCTTGACTTCAACCCC 60.224 50.000 0.00 0.00 0.00 4.95
4504 13596 2.151502 TTTGCTTGACTTCAACCCCA 57.848 45.000 0.00 0.00 0.00 4.96
4505 13597 2.380064 TTGCTTGACTTCAACCCCAT 57.620 45.000 0.00 0.00 0.00 4.00
4506 13598 2.380064 TGCTTGACTTCAACCCCATT 57.620 45.000 0.00 0.00 0.00 3.16
4507 13599 2.676748 TGCTTGACTTCAACCCCATTT 58.323 42.857 0.00 0.00 0.00 2.32
4508 13600 3.838565 TGCTTGACTTCAACCCCATTTA 58.161 40.909 0.00 0.00 0.00 1.40
4509 13601 3.572255 TGCTTGACTTCAACCCCATTTAC 59.428 43.478 0.00 0.00 0.00 2.01
4510 13602 3.572255 GCTTGACTTCAACCCCATTTACA 59.428 43.478 0.00 0.00 0.00 2.41
4511 13603 4.321230 GCTTGACTTCAACCCCATTTACAG 60.321 45.833 0.00 0.00 0.00 2.74
4512 13604 3.153919 TGACTTCAACCCCATTTACAGC 58.846 45.455 0.00 0.00 0.00 4.40
4513 13605 2.492088 GACTTCAACCCCATTTACAGCC 59.508 50.000 0.00 0.00 0.00 4.85
4514 13606 1.472480 CTTCAACCCCATTTACAGCCG 59.528 52.381 0.00 0.00 0.00 5.52
4515 13607 0.963355 TCAACCCCATTTACAGCCGC 60.963 55.000 0.00 0.00 0.00 6.53
4516 13608 2.043980 AACCCCATTTACAGCCGCG 61.044 57.895 0.00 0.00 0.00 6.46
4517 13609 3.209097 CCCCATTTACAGCCGCGG 61.209 66.667 24.05 24.05 0.00 6.46
4518 13610 3.887868 CCCATTTACAGCCGCGGC 61.888 66.667 42.34 42.34 42.33 6.53
4537 13629 1.936547 GCACAGCCAGAGTACTATTGC 59.063 52.381 5.47 5.47 0.00 3.56
4538 13630 2.677902 GCACAGCCAGAGTACTATTGCA 60.678 50.000 15.12 0.00 0.00 4.08
4539 13631 3.193263 CACAGCCAGAGTACTATTGCAG 58.807 50.000 15.12 9.91 0.00 4.41
4540 13632 2.834549 ACAGCCAGAGTACTATTGCAGT 59.165 45.455 15.12 10.53 41.62 4.40
4541 13633 3.261897 ACAGCCAGAGTACTATTGCAGTT 59.738 43.478 15.12 0.00 38.80 3.16
4542 13634 4.256920 CAGCCAGAGTACTATTGCAGTTT 58.743 43.478 15.12 0.00 38.80 2.66
4543 13635 5.046591 ACAGCCAGAGTACTATTGCAGTTTA 60.047 40.000 15.12 0.00 38.80 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 9.140286 CAATTACTGTGGACATATTCGTATAGG 57.860 37.037 0.00 0.00 0.00 2.57
21 22 9.250624 GTAGAGACAATTACTGTGGACATATTC 57.749 37.037 0.00 0.00 38.84 1.75
32 33 9.685828 GGCTAAATAGAGTAGAGACAATTACTG 57.314 37.037 0.00 0.00 30.58 2.74
116 118 2.738643 GCCAAGCTAGTATGTCGCTCAA 60.739 50.000 0.00 0.00 32.70 3.02
118 120 1.492720 GCCAAGCTAGTATGTCGCTC 58.507 55.000 0.00 0.00 32.70 5.03
140 142 1.893801 ACCTCTTTCTCGATTGTCCGT 59.106 47.619 0.00 0.00 0.00 4.69
142 144 3.320673 ACACCTCTTTCTCGATTGTCC 57.679 47.619 0.00 0.00 0.00 4.02
227 229 6.332976 AGGTGGTTCTGATTGAGGATAATT 57.667 37.500 0.00 0.00 0.00 1.40
230 232 5.032846 AGAAGGTGGTTCTGATTGAGGATA 58.967 41.667 0.00 0.00 44.41 2.59
237 239 2.887152 GCACAAGAAGGTGGTTCTGATT 59.113 45.455 0.00 0.00 45.44 2.57
251 253 2.373224 TCATGTGGTTTGTGCACAAGA 58.627 42.857 29.50 19.43 37.15 3.02
269 271 5.860611 TCCCGTTAAGAATCAAAGTCTTCA 58.139 37.500 0.00 0.00 36.69 3.02
272 274 7.447238 TCAAAATCCCGTTAAGAATCAAAGTCT 59.553 33.333 0.00 0.00 0.00 3.24
280 282 6.889722 TGGAAGATCAAAATCCCGTTAAGAAT 59.110 34.615 0.00 0.00 31.78 2.40
284 286 6.571537 GCTTTGGAAGATCAAAATCCCGTTAA 60.572 38.462 0.00 0.00 36.37 2.01
311 313 1.370900 GAACACACGTACGGCTCGT 60.371 57.895 21.06 8.10 44.35 4.18
316 318 0.594602 TGAGGAGAACACACGTACGG 59.405 55.000 21.06 11.05 0.00 4.02
317 319 2.095415 TGATGAGGAGAACACACGTACG 60.095 50.000 15.01 15.01 0.00 3.67
378 380 0.687427 TGATCGAGCTGGACATGGGA 60.687 55.000 0.00 0.00 0.00 4.37
464 466 0.402887 TCTCCGGTAGGACACTCACA 59.597 55.000 0.00 0.00 42.75 3.58
560 563 0.992802 GAAGCTAGCACAGTACACGC 59.007 55.000 18.83 0.00 0.00 5.34
808 4804 2.091541 ACAAGGCACCATTAATCACCG 58.908 47.619 0.00 0.00 0.00 4.94
850 4846 5.003804 ACTTAGGGTCAATCATGTTCACAC 58.996 41.667 0.00 0.00 0.00 3.82
899 4897 0.526524 CAGGAAGACCGAAGCTAGCG 60.527 60.000 9.55 0.00 41.83 4.26
945 4943 5.714863 AGAGGAGGGGATGCATATATAGAG 58.285 45.833 0.00 0.00 0.00 2.43
1003 5010 0.983378 GGCAGTATGTGGAGGGGAGT 60.983 60.000 0.00 0.00 39.31 3.85
1022 5032 1.681486 GAGAAGGAGGAGAAGCCCGG 61.681 65.000 0.00 0.00 37.37 5.73
1036 5049 0.172352 GAGCACCGAGGAGTGAGAAG 59.828 60.000 0.00 0.00 40.34 2.85
1038 5051 1.679305 GGAGCACCGAGGAGTGAGA 60.679 63.158 0.00 0.00 40.34 3.27
1050 5069 3.126225 GCAGCTGCAGAGGAGCAC 61.126 66.667 33.36 0.00 40.11 4.40
1166 5194 4.089239 TGATGCTACCCGCCGCAA 62.089 61.111 0.00 0.00 39.89 4.85
1176 5204 4.007659 TGTGAGACGACTTACTGATGCTA 58.992 43.478 10.73 0.00 34.39 3.49
1202 5233 1.920325 CCTGAGCTTGGGGAGGTGA 60.920 63.158 0.00 0.00 35.91 4.02
1227 5288 5.645056 TCTTATTGAACCATATGCCCAGA 57.355 39.130 0.00 0.00 0.00 3.86
1230 5291 4.706962 GGGATCTTATTGAACCATATGCCC 59.293 45.833 0.00 0.00 39.15 5.36
1309 5370 4.415881 TCTTGAGCTGTGTTAGGTTGAA 57.584 40.909 0.00 0.00 37.23 2.69
1380 5444 2.633481 AGTGGACCAAACTACAGACTCC 59.367 50.000 0.00 0.00 0.00 3.85
1535 5620 0.175760 GCCAGGAAGCACGACATCTA 59.824 55.000 0.00 0.00 0.00 1.98
1749 5834 2.122729 AGTGCCTGGGCTAGTGGA 59.877 61.111 13.05 0.00 42.51 4.02
1759 5844 3.314635 GGATTCAAATCTAGCAGTGCCTG 59.685 47.826 12.58 4.96 35.73 4.85
1909 6000 3.499338 TGGCTTGTGACCAAAGATTCAT 58.501 40.909 0.00 0.00 33.12 2.57
1971 6062 1.750399 GGTTGCAGGCGGATCACAT 60.750 57.895 0.00 0.00 0.00 3.21
1998 6089 1.438651 TGCCGCTACAGATTGTGAAC 58.561 50.000 0.00 0.00 0.00 3.18
2064 6155 0.457035 CAAACTCCCAATCATGCGGG 59.543 55.000 8.07 8.07 44.60 6.13
2138 6238 6.993786 TGTCTGTTGAACTTGTCATGTTTA 57.006 33.333 5.65 0.00 35.70 2.01
2207 6307 1.831736 GGGTGGTAGCACTGACTATGT 59.168 52.381 23.29 0.00 0.00 2.29
2337 6437 3.426615 TCCGGTGTTATCAATGCCTTTT 58.573 40.909 0.00 0.00 0.00 2.27
2355 11253 4.555708 CGAAGGTAGAGAACATGATCTCCG 60.556 50.000 24.71 17.27 45.70 4.63
2361 11259 2.457598 AGGCGAAGGTAGAGAACATGA 58.542 47.619 0.00 0.00 0.00 3.07
2370 11268 3.195698 GCGGCAAGGCGAAGGTAG 61.196 66.667 20.47 0.00 0.00 3.18
2451 11354 9.936329 AGTAATCCAAAACCAATAATACTGGAT 57.064 29.630 0.00 0.00 42.60 3.41
2680 11593 5.577554 GCCTTTTAACTGCTACACTAGTCTC 59.422 44.000 0.00 0.00 0.00 3.36
2721 11637 2.355920 CCTGAATTGCTTCTCTCCTGCT 60.356 50.000 0.00 0.00 32.29 4.24
2722 11638 2.015587 CCTGAATTGCTTCTCTCCTGC 58.984 52.381 0.00 0.00 32.29 4.85
2723 11639 2.641305 CCCTGAATTGCTTCTCTCCTG 58.359 52.381 0.00 0.00 32.29 3.86
2764 11683 6.774673 TGACTAGGTTAATGTGTTGGATCAA 58.225 36.000 0.00 0.00 0.00 2.57
2778 11697 9.280174 CAGAAACCAATAAGTTTGACTAGGTTA 57.720 33.333 0.00 0.00 40.01 2.85
2887 11806 1.152963 GGGTAGCGGCATCACCATT 60.153 57.895 16.83 0.00 39.03 3.16
2888 11807 0.762842 TAGGGTAGCGGCATCACCAT 60.763 55.000 16.83 13.43 39.03 3.55
2889 11808 0.978667 TTAGGGTAGCGGCATCACCA 60.979 55.000 16.83 0.00 39.03 4.17
2916 11838 7.847848 ACTCCTAGGGTTATTTGGTATCTGTTA 59.152 37.037 9.46 0.00 0.00 2.41
2918 11840 6.210522 ACTCCTAGGGTTATTTGGTATCTGT 58.789 40.000 9.46 0.00 0.00 3.41
2957 11879 2.226437 CGGCAACTTTGATGCAAGTAGT 59.774 45.455 0.00 0.00 45.60 2.73
2988 11910 8.706322 TCTCTGGCTTAATATCACAGTGTATA 57.294 34.615 0.00 0.00 0.00 1.47
3030 11952 6.205658 AGTCTGCAACTTTAGGAAGAAATGAC 59.794 38.462 0.00 0.00 33.03 3.06
3120 12042 1.227556 CTCCGGGGCAAGATAACCG 60.228 63.158 0.00 0.00 45.57 4.44
3240 12162 3.980646 TTGTTGCTGGTGTTGTATGAC 57.019 42.857 0.00 0.00 0.00 3.06
3432 12366 0.037697 CAACTTCACCCATCGTCGGA 60.038 55.000 0.00 0.00 0.00 4.55
3474 12408 0.103026 TCGAGGGCACATCAATCTCG 59.897 55.000 0.00 0.00 45.77 4.04
3516 12450 4.991153 TGCAACACCAGATTGTTTTGTA 57.009 36.364 0.00 0.00 37.62 2.41
3618 12564 9.313118 CAACTACAAACTTGCTTTCCTTTATTT 57.687 29.630 0.00 0.00 0.00 1.40
3662 12609 6.282167 CCATATTTTGCTGCAATGATTGGTA 58.718 36.000 16.77 0.00 0.00 3.25
3663 12610 5.120399 CCATATTTTGCTGCAATGATTGGT 58.880 37.500 16.77 0.65 0.00 3.67
3664 12611 4.024387 GCCATATTTTGCTGCAATGATTGG 60.024 41.667 16.77 19.54 0.00 3.16
3708 12687 8.721478 AGACTGAAAATAATCACACACATACAC 58.279 33.333 0.00 0.00 0.00 2.90
3712 12691 6.942005 TCCAGACTGAAAATAATCACACACAT 59.058 34.615 3.32 0.00 0.00 3.21
3714 12693 6.801539 TCCAGACTGAAAATAATCACACAC 57.198 37.500 3.32 0.00 0.00 3.82
3738 12718 5.437191 ACTAGAAATTCGGAAGTTCCCAT 57.563 39.130 22.82 10.72 36.20 4.00
3791 12775 3.276281 TGCATGGCATCTTGCTTCT 57.724 47.368 12.32 0.00 44.28 2.85
3832 12921 1.125711 ATATGGCTACCCACGGACCC 61.126 60.000 0.00 0.00 45.77 4.46
3922 13014 4.370049 CACAACATGCAAAACCAAGATGA 58.630 39.130 0.00 0.00 0.00 2.92
3936 13028 3.491639 CCACAAATGACAAGCACAACATG 59.508 43.478 0.00 0.00 0.00 3.21
3971 13063 8.812972 TCTGCTTTAGATTGGAGTTTAGAGTTA 58.187 33.333 0.00 0.00 0.00 2.24
3978 13070 7.449704 ACAAAGATCTGCTTTAGATTGGAGTTT 59.550 33.333 0.00 0.00 46.12 2.66
3987 13079 5.858381 ACACTGACAAAGATCTGCTTTAGA 58.142 37.500 0.00 0.00 44.83 2.10
4014 13106 6.781507 AGGAAGTAGTGTGTTAGAGGTAGTTT 59.218 38.462 0.00 0.00 0.00 2.66
4015 13107 6.313324 AGGAAGTAGTGTGTTAGAGGTAGTT 58.687 40.000 0.00 0.00 0.00 2.24
4019 13111 4.087907 GGAGGAAGTAGTGTGTTAGAGGT 58.912 47.826 0.00 0.00 0.00 3.85
4027 13119 1.893801 AGGAACGGAGGAAGTAGTGTG 59.106 52.381 0.00 0.00 0.00 3.82
4028 13120 2.305858 AGGAACGGAGGAAGTAGTGT 57.694 50.000 0.00 0.00 0.00 3.55
4040 13132 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
4064 13156 9.737427 CGTATGTAGTCACTTATTGAAATCTCT 57.263 33.333 0.00 0.00 35.39 3.10
4065 13157 8.969267 CCGTATGTAGTCACTTATTGAAATCTC 58.031 37.037 0.00 0.00 35.39 2.75
4066 13158 8.692710 TCCGTATGTAGTCACTTATTGAAATCT 58.307 33.333 0.00 0.00 35.39 2.40
4067 13159 8.867112 TCCGTATGTAGTCACTTATTGAAATC 57.133 34.615 0.00 0.00 35.39 2.17
4068 13160 7.438459 GCTCCGTATGTAGTCACTTATTGAAAT 59.562 37.037 0.00 0.00 35.39 2.17
4069 13161 6.755141 GCTCCGTATGTAGTCACTTATTGAAA 59.245 38.462 0.00 0.00 35.39 2.69
4070 13162 6.127563 TGCTCCGTATGTAGTCACTTATTGAA 60.128 38.462 0.00 0.00 35.39 2.69
4071 13163 5.358725 TGCTCCGTATGTAGTCACTTATTGA 59.641 40.000 0.00 0.00 0.00 2.57
4072 13164 5.588240 TGCTCCGTATGTAGTCACTTATTG 58.412 41.667 0.00 0.00 0.00 1.90
4073 13165 5.847111 TGCTCCGTATGTAGTCACTTATT 57.153 39.130 0.00 0.00 0.00 1.40
4074 13166 5.847111 TTGCTCCGTATGTAGTCACTTAT 57.153 39.130 0.00 0.00 0.00 1.73
4075 13167 5.648178 TTTGCTCCGTATGTAGTCACTTA 57.352 39.130 0.00 0.00 0.00 2.24
4076 13168 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
4077 13169 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
4078 13170 6.534079 ACTTATTTTGCTCCGTATGTAGTCAC 59.466 38.462 0.00 0.00 0.00 3.67
4079 13171 6.533723 CACTTATTTTGCTCCGTATGTAGTCA 59.466 38.462 0.00 0.00 0.00 3.41
4080 13172 6.755141 TCACTTATTTTGCTCCGTATGTAGTC 59.245 38.462 0.00 0.00 0.00 2.59
4081 13173 6.636705 TCACTTATTTTGCTCCGTATGTAGT 58.363 36.000 0.00 0.00 0.00 2.73
4082 13174 7.534085 TTCACTTATTTTGCTCCGTATGTAG 57.466 36.000 0.00 0.00 0.00 2.74
4083 13175 7.985184 AGATTCACTTATTTTGCTCCGTATGTA 59.015 33.333 0.00 0.00 0.00 2.29
4084 13176 6.823689 AGATTCACTTATTTTGCTCCGTATGT 59.176 34.615 0.00 0.00 0.00 2.29
4085 13177 7.251704 AGATTCACTTATTTTGCTCCGTATG 57.748 36.000 0.00 0.00 0.00 2.39
4086 13178 8.204836 AGTAGATTCACTTATTTTGCTCCGTAT 58.795 33.333 0.00 0.00 0.00 3.06
4087 13179 7.553334 AGTAGATTCACTTATTTTGCTCCGTA 58.447 34.615 0.00 0.00 0.00 4.02
4088 13180 6.407202 AGTAGATTCACTTATTTTGCTCCGT 58.593 36.000 0.00 0.00 0.00 4.69
4089 13181 6.758886 AGAGTAGATTCACTTATTTTGCTCCG 59.241 38.462 0.00 0.00 0.00 4.63
4090 13182 9.601217 TTAGAGTAGATTCACTTATTTTGCTCC 57.399 33.333 0.00 0.00 0.00 4.70
4121 13213 9.901172 ACTATCACATACGGATGTATATAGACA 57.099 33.333 30.73 11.02 44.82 3.41
4164 13256 9.855021 CCATCCGTTTCTAAATATTTGTCTTTT 57.145 29.630 11.05 0.00 0.00 2.27
4165 13257 9.238368 TCCATCCGTTTCTAAATATTTGTCTTT 57.762 29.630 11.05 0.00 0.00 2.52
4166 13258 8.801882 TCCATCCGTTTCTAAATATTTGTCTT 57.198 30.769 11.05 0.00 0.00 3.01
4167 13259 8.047310 ACTCCATCCGTTTCTAAATATTTGTCT 58.953 33.333 11.05 0.00 0.00 3.41
4168 13260 8.209917 ACTCCATCCGTTTCTAAATATTTGTC 57.790 34.615 11.05 0.00 0.00 3.18
4169 13261 9.106070 GTACTCCATCCGTTTCTAAATATTTGT 57.894 33.333 11.05 0.00 0.00 2.83
4170 13262 9.326413 AGTACTCCATCCGTTTCTAAATATTTG 57.674 33.333 11.05 1.65 0.00 2.32
4171 13263 9.901172 AAGTACTCCATCCGTTTCTAAATATTT 57.099 29.630 5.89 5.89 0.00 1.40
4172 13264 9.901172 AAAGTACTCCATCCGTTTCTAAATATT 57.099 29.630 0.00 0.00 0.00 1.28
4173 13265 9.543783 GAAAGTACTCCATCCGTTTCTAAATAT 57.456 33.333 0.00 0.00 0.00 1.28
4174 13266 8.755977 AGAAAGTACTCCATCCGTTTCTAAATA 58.244 33.333 0.00 0.00 33.54 1.40
4175 13267 7.621796 AGAAAGTACTCCATCCGTTTCTAAAT 58.378 34.615 0.00 0.00 33.54 1.40
4176 13268 7.001099 AGAAAGTACTCCATCCGTTTCTAAA 57.999 36.000 0.00 0.00 33.54 1.85
4177 13269 6.600882 AGAAAGTACTCCATCCGTTTCTAA 57.399 37.500 0.00 0.00 33.54 2.10
4178 13270 6.600882 AAGAAAGTACTCCATCCGTTTCTA 57.399 37.500 0.00 0.00 34.05 2.10
4179 13271 5.485209 AAGAAAGTACTCCATCCGTTTCT 57.515 39.130 0.00 0.00 36.13 2.52
4180 13272 5.699458 TCAAAGAAAGTACTCCATCCGTTTC 59.301 40.000 0.00 0.00 0.00 2.78
4181 13273 5.617252 TCAAAGAAAGTACTCCATCCGTTT 58.383 37.500 0.00 0.00 0.00 3.60
4182 13274 5.221661 ACTCAAAGAAAGTACTCCATCCGTT 60.222 40.000 0.00 0.00 0.00 4.44
4183 13275 4.283722 ACTCAAAGAAAGTACTCCATCCGT 59.716 41.667 0.00 0.00 0.00 4.69
4184 13276 4.822026 ACTCAAAGAAAGTACTCCATCCG 58.178 43.478 0.00 0.00 0.00 4.18
4185 13277 5.998363 ACAACTCAAAGAAAGTACTCCATCC 59.002 40.000 0.00 0.00 0.00 3.51
4186 13278 7.497925 AACAACTCAAAGAAAGTACTCCATC 57.502 36.000 0.00 0.00 0.00 3.51
4187 13279 7.339466 ACAAACAACTCAAAGAAAGTACTCCAT 59.661 33.333 0.00 0.00 0.00 3.41
4188 13280 6.657541 ACAAACAACTCAAAGAAAGTACTCCA 59.342 34.615 0.00 0.00 0.00 3.86
4189 13281 7.085052 ACAAACAACTCAAAGAAAGTACTCC 57.915 36.000 0.00 0.00 0.00 3.85
4190 13282 8.021396 ACAACAAACAACTCAAAGAAAGTACTC 58.979 33.333 0.00 0.00 0.00 2.59
4191 13283 7.882179 ACAACAAACAACTCAAAGAAAGTACT 58.118 30.769 0.00 0.00 0.00 2.73
4192 13284 8.515473 AACAACAAACAACTCAAAGAAAGTAC 57.485 30.769 0.00 0.00 0.00 2.73
4193 13285 9.535878 AAAACAACAAACAACTCAAAGAAAGTA 57.464 25.926 0.00 0.00 0.00 2.24
4194 13286 8.432110 AAAACAACAAACAACTCAAAGAAAGT 57.568 26.923 0.00 0.00 0.00 2.66
4195 13287 9.157259 CAAAAACAACAAACAACTCAAAGAAAG 57.843 29.630 0.00 0.00 0.00 2.62
4196 13288 8.883731 TCAAAAACAACAAACAACTCAAAGAAA 58.116 25.926 0.00 0.00 0.00 2.52
4197 13289 8.425577 TCAAAAACAACAAACAACTCAAAGAA 57.574 26.923 0.00 0.00 0.00 2.52
4198 13290 7.923344 TCTCAAAAACAACAAACAACTCAAAGA 59.077 29.630 0.00 0.00 0.00 2.52
4199 13291 8.071122 TCTCAAAAACAACAAACAACTCAAAG 57.929 30.769 0.00 0.00 0.00 2.77
4200 13292 8.600449 ATCTCAAAAACAACAAACAACTCAAA 57.400 26.923 0.00 0.00 0.00 2.69
4201 13293 9.352784 CTATCTCAAAAACAACAAACAACTCAA 57.647 29.630 0.00 0.00 0.00 3.02
4202 13294 7.487829 GCTATCTCAAAAACAACAAACAACTCA 59.512 33.333 0.00 0.00 0.00 3.41
4203 13295 7.702348 AGCTATCTCAAAAACAACAAACAACTC 59.298 33.333 0.00 0.00 0.00 3.01
4204 13296 7.547227 AGCTATCTCAAAAACAACAAACAACT 58.453 30.769 0.00 0.00 0.00 3.16
4205 13297 7.755582 AGCTATCTCAAAAACAACAAACAAC 57.244 32.000 0.00 0.00 0.00 3.32
4206 13298 7.918562 GGTAGCTATCTCAAAAACAACAAACAA 59.081 33.333 0.00 0.00 0.00 2.83
4207 13299 7.422399 GGTAGCTATCTCAAAAACAACAAACA 58.578 34.615 0.00 0.00 0.00 2.83
4208 13300 6.861572 GGGTAGCTATCTCAAAAACAACAAAC 59.138 38.462 3.53 0.00 0.00 2.93
4209 13301 6.547880 TGGGTAGCTATCTCAAAAACAACAAA 59.452 34.615 3.53 0.00 0.00 2.83
4210 13302 6.016610 GTGGGTAGCTATCTCAAAAACAACAA 60.017 38.462 3.53 0.00 0.00 2.83
4211 13303 5.472137 GTGGGTAGCTATCTCAAAAACAACA 59.528 40.000 3.53 0.00 0.00 3.33
4212 13304 5.705905 AGTGGGTAGCTATCTCAAAAACAAC 59.294 40.000 3.53 0.00 0.00 3.32
4213 13305 5.876357 AGTGGGTAGCTATCTCAAAAACAA 58.124 37.500 3.53 0.00 0.00 2.83
4214 13306 5.499004 AGTGGGTAGCTATCTCAAAAACA 57.501 39.130 3.53 0.00 0.00 2.83
4215 13307 8.507524 AATAAGTGGGTAGCTATCTCAAAAAC 57.492 34.615 3.53 0.00 0.00 2.43
4216 13308 9.174166 GAAATAAGTGGGTAGCTATCTCAAAAA 57.826 33.333 3.53 0.00 0.00 1.94
4217 13309 8.325787 TGAAATAAGTGGGTAGCTATCTCAAAA 58.674 33.333 3.53 0.00 0.00 2.44
4218 13310 7.857456 TGAAATAAGTGGGTAGCTATCTCAAA 58.143 34.615 3.53 0.00 0.00 2.69
4219 13311 7.432148 TGAAATAAGTGGGTAGCTATCTCAA 57.568 36.000 3.53 0.00 0.00 3.02
4220 13312 7.125811 ACTTGAAATAAGTGGGTAGCTATCTCA 59.874 37.037 3.53 0.00 0.00 3.27
4221 13313 7.439655 CACTTGAAATAAGTGGGTAGCTATCTC 59.560 40.741 3.53 0.00 42.83 2.75
4222 13314 7.275920 CACTTGAAATAAGTGGGTAGCTATCT 58.724 38.462 3.53 0.00 42.83 1.98
4223 13315 7.484035 CACTTGAAATAAGTGGGTAGCTATC 57.516 40.000 11.01 0.00 42.83 2.08
4233 13325 4.697352 CAGAGGGTCCACTTGAAATAAGTG 59.303 45.833 11.72 11.72 45.33 3.16
4234 13326 4.597507 TCAGAGGGTCCACTTGAAATAAGT 59.402 41.667 0.00 0.00 0.00 2.24
4235 13327 4.938226 GTCAGAGGGTCCACTTGAAATAAG 59.062 45.833 0.00 0.00 0.00 1.73
4236 13328 4.349636 TGTCAGAGGGTCCACTTGAAATAA 59.650 41.667 0.00 0.00 0.00 1.40
4237 13329 3.907474 TGTCAGAGGGTCCACTTGAAATA 59.093 43.478 0.00 0.00 0.00 1.40
4238 13330 2.711009 TGTCAGAGGGTCCACTTGAAAT 59.289 45.455 0.00 0.00 0.00 2.17
4239 13331 2.123589 TGTCAGAGGGTCCACTTGAAA 58.876 47.619 0.00 0.00 0.00 2.69
4240 13332 1.416401 GTGTCAGAGGGTCCACTTGAA 59.584 52.381 0.00 0.00 0.00 2.69
4241 13333 1.048601 GTGTCAGAGGGTCCACTTGA 58.951 55.000 0.00 0.00 0.00 3.02
4242 13334 0.758734 TGTGTCAGAGGGTCCACTTG 59.241 55.000 0.00 0.00 0.00 3.16
4243 13335 0.759346 GTGTGTCAGAGGGTCCACTT 59.241 55.000 0.00 0.00 0.00 3.16
4244 13336 0.105453 AGTGTGTCAGAGGGTCCACT 60.105 55.000 0.00 0.00 0.00 4.00
4245 13337 1.272769 GTAGTGTGTCAGAGGGTCCAC 59.727 57.143 0.00 0.00 0.00 4.02
4246 13338 1.147191 AGTAGTGTGTCAGAGGGTCCA 59.853 52.381 0.00 0.00 0.00 4.02
4247 13339 1.926108 AGTAGTGTGTCAGAGGGTCC 58.074 55.000 0.00 0.00 0.00 4.46
4248 13340 2.891580 TCAAGTAGTGTGTCAGAGGGTC 59.108 50.000 0.00 0.00 0.00 4.46
4249 13341 2.628657 GTCAAGTAGTGTGTCAGAGGGT 59.371 50.000 0.00 0.00 0.00 4.34
4250 13342 2.351835 CGTCAAGTAGTGTGTCAGAGGG 60.352 54.545 0.00 0.00 0.00 4.30
4251 13343 2.552743 TCGTCAAGTAGTGTGTCAGAGG 59.447 50.000 0.00 0.00 0.00 3.69
4252 13344 3.898517 TCGTCAAGTAGTGTGTCAGAG 57.101 47.619 0.00 0.00 0.00 3.35
4253 13345 3.611766 GCATCGTCAAGTAGTGTGTCAGA 60.612 47.826 0.00 0.00 0.00 3.27
4254 13346 2.663602 GCATCGTCAAGTAGTGTGTCAG 59.336 50.000 0.00 0.00 0.00 3.51
4255 13347 2.609491 GGCATCGTCAAGTAGTGTGTCA 60.609 50.000 0.00 0.00 0.00 3.58
4256 13348 1.993370 GGCATCGTCAAGTAGTGTGTC 59.007 52.381 0.00 0.00 0.00 3.67
4257 13349 1.618837 AGGCATCGTCAAGTAGTGTGT 59.381 47.619 0.00 0.00 0.00 3.72
4258 13350 2.370281 AGGCATCGTCAAGTAGTGTG 57.630 50.000 0.00 0.00 0.00 3.82
4259 13351 2.299013 TCAAGGCATCGTCAAGTAGTGT 59.701 45.455 0.00 0.00 0.00 3.55
4260 13352 2.668457 GTCAAGGCATCGTCAAGTAGTG 59.332 50.000 0.00 0.00 0.00 2.74
4261 13353 2.299013 TGTCAAGGCATCGTCAAGTAGT 59.701 45.455 0.00 0.00 0.00 2.73
4262 13354 2.926200 CTGTCAAGGCATCGTCAAGTAG 59.074 50.000 0.00 0.00 0.00 2.57
4263 13355 2.930887 GCTGTCAAGGCATCGTCAAGTA 60.931 50.000 0.00 0.00 0.00 2.24
4264 13356 1.800805 CTGTCAAGGCATCGTCAAGT 58.199 50.000 0.00 0.00 0.00 3.16
4265 13357 0.445436 GCTGTCAAGGCATCGTCAAG 59.555 55.000 0.00 0.00 0.00 3.02
4266 13358 2.543578 GCTGTCAAGGCATCGTCAA 58.456 52.632 0.00 0.00 0.00 3.18
4267 13359 4.284123 GCTGTCAAGGCATCGTCA 57.716 55.556 0.00 0.00 0.00 4.35
4275 13367 1.201647 CAATTCTGCTGGCTGTCAAGG 59.798 52.381 0.00 0.00 0.00 3.61
4276 13368 1.402456 GCAATTCTGCTGGCTGTCAAG 60.402 52.381 0.00 0.00 45.74 3.02
4277 13369 0.599558 GCAATTCTGCTGGCTGTCAA 59.400 50.000 0.00 0.00 45.74 3.18
4278 13370 2.260247 GCAATTCTGCTGGCTGTCA 58.740 52.632 0.00 0.00 45.74 3.58
4281 13373 3.060020 CCCGCAATTCTGCTGGCTG 62.060 63.158 0.00 0.00 44.70 4.85
4282 13374 2.753043 CCCGCAATTCTGCTGGCT 60.753 61.111 0.00 0.00 44.70 4.75
4287 13379 4.179579 GACGCCCCGCAATTCTGC 62.180 66.667 0.00 0.00 45.75 4.26
4288 13380 3.508840 GGACGCCCCGCAATTCTG 61.509 66.667 0.00 0.00 0.00 3.02
4299 13391 3.858868 TTGTGTGAGCTCGGACGCC 62.859 63.158 9.64 0.00 0.00 5.68
4300 13392 1.495584 TTTTGTGTGAGCTCGGACGC 61.496 55.000 9.64 9.89 0.00 5.19
4301 13393 1.136252 CATTTTGTGTGAGCTCGGACG 60.136 52.381 9.64 0.00 0.00 4.79
4302 13394 1.873591 ACATTTTGTGTGAGCTCGGAC 59.126 47.619 9.64 8.57 40.28 4.79
4303 13395 2.254546 ACATTTTGTGTGAGCTCGGA 57.745 45.000 9.64 0.00 40.28 4.55
4304 13396 4.219033 GTTTACATTTTGTGTGAGCTCGG 58.781 43.478 9.64 0.00 42.24 4.63
4305 13397 4.843147 TGTTTACATTTTGTGTGAGCTCG 58.157 39.130 9.64 0.00 42.24 5.03
4306 13398 4.676924 GCTGTTTACATTTTGTGTGAGCTC 59.323 41.667 6.82 6.82 42.24 4.09
4307 13399 4.610945 GCTGTTTACATTTTGTGTGAGCT 58.389 39.130 0.00 0.00 42.24 4.09
4308 13400 3.421888 CGCTGTTTACATTTTGTGTGAGC 59.578 43.478 0.00 0.00 42.24 4.26
4309 13401 3.974401 CCGCTGTTTACATTTTGTGTGAG 59.026 43.478 0.00 0.00 42.24 3.51
4310 13402 3.793801 GCCGCTGTTTACATTTTGTGTGA 60.794 43.478 0.00 0.00 42.24 3.58
4311 13403 2.470999 GCCGCTGTTTACATTTTGTGTG 59.529 45.455 0.00 0.00 42.24 3.82
4312 13404 2.738135 GCCGCTGTTTACATTTTGTGT 58.262 42.857 0.00 0.00 44.95 3.72
4313 13405 1.713404 CGCCGCTGTTTACATTTTGTG 59.287 47.619 0.00 0.00 0.00 3.33
4314 13406 1.604755 TCGCCGCTGTTTACATTTTGT 59.395 42.857 0.00 0.00 0.00 2.83
4315 13407 1.976045 GTCGCCGCTGTTTACATTTTG 59.024 47.619 0.00 0.00 0.00 2.44
4316 13408 1.399215 CGTCGCCGCTGTTTACATTTT 60.399 47.619 0.00 0.00 0.00 1.82
4317 13409 0.165079 CGTCGCCGCTGTTTACATTT 59.835 50.000 0.00 0.00 0.00 2.32
4318 13410 0.668096 TCGTCGCCGCTGTTTACATT 60.668 50.000 0.00 0.00 0.00 2.71
4319 13411 0.668096 TTCGTCGCCGCTGTTTACAT 60.668 50.000 0.00 0.00 0.00 2.29
4320 13412 1.279527 CTTCGTCGCCGCTGTTTACA 61.280 55.000 0.00 0.00 0.00 2.41
4321 13413 1.414897 CTTCGTCGCCGCTGTTTAC 59.585 57.895 0.00 0.00 0.00 2.01
4322 13414 1.735198 CCTTCGTCGCCGCTGTTTA 60.735 57.895 0.00 0.00 0.00 2.01
4323 13415 3.041940 CCTTCGTCGCCGCTGTTT 61.042 61.111 0.00 0.00 0.00 2.83
4327 13419 4.980805 TTTGCCTTCGTCGCCGCT 62.981 61.111 0.00 0.00 0.00 5.52
4328 13420 4.736631 GTTTGCCTTCGTCGCCGC 62.737 66.667 0.00 0.00 0.00 6.53
4329 13421 2.677003 ATGTTTGCCTTCGTCGCCG 61.677 57.895 0.00 0.00 0.00 6.46
4330 13422 1.154225 CATGTTTGCCTTCGTCGCC 60.154 57.895 0.00 0.00 0.00 5.54
4331 13423 0.447801 ATCATGTTTGCCTTCGTCGC 59.552 50.000 0.00 0.00 0.00 5.19
4332 13424 1.731709 TGATCATGTTTGCCTTCGTCG 59.268 47.619 0.00 0.00 0.00 5.12
4333 13425 2.483877 TGTGATCATGTTTGCCTTCGTC 59.516 45.455 0.00 0.00 0.00 4.20
4334 13426 2.503331 TGTGATCATGTTTGCCTTCGT 58.497 42.857 0.00 0.00 0.00 3.85
4335 13427 3.431856 CATGTGATCATGTTTGCCTTCG 58.568 45.455 0.00 0.00 44.37 3.79
4346 13438 0.534427 CCGCTGCCTCATGTGATCAT 60.534 55.000 0.00 0.00 34.21 2.45
4347 13439 1.153309 CCGCTGCCTCATGTGATCA 60.153 57.895 0.00 0.00 0.00 2.92
4348 13440 1.890979 CCCGCTGCCTCATGTGATC 60.891 63.158 0.00 0.00 0.00 2.92
4349 13441 2.191375 CCCGCTGCCTCATGTGAT 59.809 61.111 0.00 0.00 0.00 3.06
4350 13442 4.783621 GCCCGCTGCCTCATGTGA 62.784 66.667 0.00 0.00 0.00 3.58
4356 13448 4.537433 ATTCTCGCCCGCTGCCTC 62.537 66.667 0.00 0.00 36.24 4.70
4357 13449 4.101448 AATTCTCGCCCGCTGCCT 62.101 61.111 0.00 0.00 36.24 4.75
4358 13450 3.880846 CAATTCTCGCCCGCTGCC 61.881 66.667 0.00 0.00 36.24 4.85
4359 13451 4.543084 GCAATTCTCGCCCGCTGC 62.543 66.667 0.00 0.00 0.00 5.25
4360 13452 2.588146 CTTGCAATTCTCGCCCGCTG 62.588 60.000 0.00 0.00 0.00 5.18
4361 13453 2.359850 TTGCAATTCTCGCCCGCT 60.360 55.556 0.00 0.00 0.00 5.52
4362 13454 2.100991 CTTGCAATTCTCGCCCGC 59.899 61.111 0.00 0.00 0.00 6.13
4363 13455 2.764314 CCCTTGCAATTCTCGCCCG 61.764 63.158 0.00 0.00 0.00 6.13
4364 13456 3.068729 GCCCTTGCAATTCTCGCCC 62.069 63.158 0.00 0.00 37.47 6.13
4365 13457 1.997928 GAGCCCTTGCAATTCTCGCC 61.998 60.000 0.00 0.00 41.13 5.54
4366 13458 1.431036 GAGCCCTTGCAATTCTCGC 59.569 57.895 0.00 0.00 41.13 5.03
4367 13459 1.709147 CCGAGCCCTTGCAATTCTCG 61.709 60.000 25.32 25.32 44.21 4.04
4368 13460 1.379642 CCCGAGCCCTTGCAATTCTC 61.380 60.000 0.00 6.16 41.13 2.87
4369 13461 1.379044 CCCGAGCCCTTGCAATTCT 60.379 57.895 0.00 0.00 41.13 2.40
4370 13462 3.068729 GCCCGAGCCCTTGCAATTC 62.069 63.158 0.00 0.00 41.13 2.17
4371 13463 3.070576 GCCCGAGCCCTTGCAATT 61.071 61.111 0.00 0.00 41.13 2.32
4372 13464 4.365111 TGCCCGAGCCCTTGCAAT 62.365 61.111 0.00 0.00 41.13 3.56
4382 13474 1.948721 GAAAAATGGGGCTGCCCGAG 61.949 60.000 30.32 0.00 46.66 4.63
4383 13475 1.981853 GAAAAATGGGGCTGCCCGA 60.982 57.895 30.32 27.82 46.66 5.14
4384 13476 1.948721 GAGAAAAATGGGGCTGCCCG 61.949 60.000 30.32 0.00 46.66 6.13
4385 13477 0.904394 TGAGAAAAATGGGGCTGCCC 60.904 55.000 29.93 29.93 44.51 5.36
4386 13478 0.247460 GTGAGAAAAATGGGGCTGCC 59.753 55.000 11.05 11.05 0.00 4.85
4387 13479 0.109132 CGTGAGAAAAATGGGGCTGC 60.109 55.000 0.00 0.00 0.00 5.25
4388 13480 0.527565 CCGTGAGAAAAATGGGGCTG 59.472 55.000 0.00 0.00 0.00 4.85
4389 13481 0.611896 CCCGTGAGAAAAATGGGGCT 60.612 55.000 0.00 0.00 39.83 5.19
4390 13482 1.890174 CCCGTGAGAAAAATGGGGC 59.110 57.895 0.00 0.00 39.83 5.80
4391 13483 0.897863 TGCCCGTGAGAAAAATGGGG 60.898 55.000 2.99 0.00 43.24 4.96
4392 13484 0.965439 TTGCCCGTGAGAAAAATGGG 59.035 50.000 0.00 0.00 45.47 4.00
4393 13485 1.885887 TCTTGCCCGTGAGAAAAATGG 59.114 47.619 0.00 0.00 0.00 3.16
4394 13486 2.813754 TCTCTTGCCCGTGAGAAAAATG 59.186 45.455 0.00 0.00 36.52 2.32
4395 13487 3.140325 TCTCTTGCCCGTGAGAAAAAT 57.860 42.857 0.00 0.00 36.52 1.82
4396 13488 2.631160 TCTCTTGCCCGTGAGAAAAA 57.369 45.000 0.00 0.00 36.52 1.94
4397 13489 2.631160 TTCTCTTGCCCGTGAGAAAA 57.369 45.000 0.00 0.00 43.63 2.29
4400 13492 1.205655 CTCATTCTCTTGCCCGTGAGA 59.794 52.381 0.00 0.00 36.15 3.27
4401 13493 1.205655 TCTCATTCTCTTGCCCGTGAG 59.794 52.381 0.00 0.00 35.58 3.51
4402 13494 1.266178 TCTCATTCTCTTGCCCGTGA 58.734 50.000 0.00 0.00 0.00 4.35
4403 13495 2.099141 TTCTCATTCTCTTGCCCGTG 57.901 50.000 0.00 0.00 0.00 4.94
4404 13496 3.012518 CAATTCTCATTCTCTTGCCCGT 58.987 45.455 0.00 0.00 0.00 5.28
4405 13497 3.012518 ACAATTCTCATTCTCTTGCCCG 58.987 45.455 0.00 0.00 0.00 6.13
4406 13498 3.064545 CGACAATTCTCATTCTCTTGCCC 59.935 47.826 0.00 0.00 0.00 5.36
4407 13499 3.064545 CCGACAATTCTCATTCTCTTGCC 59.935 47.826 0.00 0.00 0.00 4.52
4408 13500 3.486542 GCCGACAATTCTCATTCTCTTGC 60.487 47.826 0.00 0.00 0.00 4.01
4409 13501 3.064545 GGCCGACAATTCTCATTCTCTTG 59.935 47.826 0.00 0.00 0.00 3.02
4410 13502 3.274288 GGCCGACAATTCTCATTCTCTT 58.726 45.455 0.00 0.00 0.00 2.85
4411 13503 2.739932 CGGCCGACAATTCTCATTCTCT 60.740 50.000 24.07 0.00 0.00 3.10
4412 13504 1.594862 CGGCCGACAATTCTCATTCTC 59.405 52.381 24.07 0.00 0.00 2.87
4413 13505 1.656652 CGGCCGACAATTCTCATTCT 58.343 50.000 24.07 0.00 0.00 2.40
4414 13506 0.657840 CCGGCCGACAATTCTCATTC 59.342 55.000 30.73 0.00 0.00 2.67
4415 13507 0.748005 CCCGGCCGACAATTCTCATT 60.748 55.000 30.73 0.00 0.00 2.57
4416 13508 1.153168 CCCGGCCGACAATTCTCAT 60.153 57.895 30.73 0.00 0.00 2.90
4417 13509 2.267642 CCCGGCCGACAATTCTCA 59.732 61.111 30.73 0.00 0.00 3.27
4418 13510 2.513897 CCCCGGCCGACAATTCTC 60.514 66.667 30.73 0.00 0.00 2.87
4419 13511 4.796495 GCCCCGGCCGACAATTCT 62.796 66.667 30.73 0.00 34.56 2.40
4429 13521 0.178990 AAAGATAATCAGGCCCCGGC 60.179 55.000 0.00 0.00 41.06 6.13
4430 13522 1.609208 CAAAGATAATCAGGCCCCGG 58.391 55.000 0.00 0.00 0.00 5.73
4431 13523 0.954452 GCAAAGATAATCAGGCCCCG 59.046 55.000 0.00 0.00 0.00 5.73
4432 13524 2.371658 AGCAAAGATAATCAGGCCCC 57.628 50.000 0.00 0.00 0.00 5.80
4433 13525 4.038042 GGTTAAGCAAAGATAATCAGGCCC 59.962 45.833 0.00 0.00 0.00 5.80
4434 13526 4.889995 AGGTTAAGCAAAGATAATCAGGCC 59.110 41.667 7.52 0.00 0.00 5.19
4435 13527 5.277538 CGAGGTTAAGCAAAGATAATCAGGC 60.278 44.000 7.52 0.00 0.00 4.85
4436 13528 6.049149 TCGAGGTTAAGCAAAGATAATCAGG 58.951 40.000 7.52 0.00 0.00 3.86
4437 13529 7.539712 TTCGAGGTTAAGCAAAGATAATCAG 57.460 36.000 7.52 0.00 0.00 2.90
4438 13530 7.915293 TTTCGAGGTTAAGCAAAGATAATCA 57.085 32.000 7.52 0.00 0.00 2.57
4439 13531 9.278734 CTTTTTCGAGGTTAAGCAAAGATAATC 57.721 33.333 7.52 0.00 0.00 1.75
4440 13532 9.010029 TCTTTTTCGAGGTTAAGCAAAGATAAT 57.990 29.630 7.52 0.00 0.00 1.28
4441 13533 8.385898 TCTTTTTCGAGGTTAAGCAAAGATAA 57.614 30.769 7.52 2.42 0.00 1.75
4442 13534 7.972832 TCTTTTTCGAGGTTAAGCAAAGATA 57.027 32.000 7.52 0.00 0.00 1.98
4443 13535 6.877611 TCTTTTTCGAGGTTAAGCAAAGAT 57.122 33.333 7.52 0.00 0.00 2.40
4444 13536 6.687081 TTCTTTTTCGAGGTTAAGCAAAGA 57.313 33.333 7.52 9.71 0.00 2.52
4445 13537 7.749539 TTTTCTTTTTCGAGGTTAAGCAAAG 57.250 32.000 7.52 7.61 0.00 2.77
4446 13538 8.710835 AATTTTCTTTTTCGAGGTTAAGCAAA 57.289 26.923 7.52 0.00 0.00 3.68
4447 13539 9.974980 ATAATTTTCTTTTTCGAGGTTAAGCAA 57.025 25.926 7.52 0.00 0.00 3.91
4448 13540 9.974980 AATAATTTTCTTTTTCGAGGTTAAGCA 57.025 25.926 7.52 0.00 0.00 3.91
4464 13556 9.836864 AGCAAAAGGAAAGACAAATAATTTTCT 57.163 25.926 0.00 0.00 31.83 2.52
4467 13559 9.612066 TCAAGCAAAAGGAAAGACAAATAATTT 57.388 25.926 0.00 0.00 0.00 1.82
4468 13560 9.045223 GTCAAGCAAAAGGAAAGACAAATAATT 57.955 29.630 0.00 0.00 0.00 1.40
4469 13561 8.424133 AGTCAAGCAAAAGGAAAGACAAATAAT 58.576 29.630 0.00 0.00 0.00 1.28
4470 13562 7.781056 AGTCAAGCAAAAGGAAAGACAAATAA 58.219 30.769 0.00 0.00 0.00 1.40
4471 13563 7.346751 AGTCAAGCAAAAGGAAAGACAAATA 57.653 32.000 0.00 0.00 0.00 1.40
4472 13564 6.225981 AGTCAAGCAAAAGGAAAGACAAAT 57.774 33.333 0.00 0.00 0.00 2.32
4473 13565 5.659440 AGTCAAGCAAAAGGAAAGACAAA 57.341 34.783 0.00 0.00 0.00 2.83
4474 13566 5.184864 TGAAGTCAAGCAAAAGGAAAGACAA 59.815 36.000 0.00 0.00 0.00 3.18
4475 13567 4.704540 TGAAGTCAAGCAAAAGGAAAGACA 59.295 37.500 0.00 0.00 0.00 3.41
4476 13568 5.248870 TGAAGTCAAGCAAAAGGAAAGAC 57.751 39.130 0.00 0.00 0.00 3.01
4477 13569 5.650543 GTTGAAGTCAAGCAAAAGGAAAGA 58.349 37.500 0.00 0.00 36.39 2.52
4478 13570 5.956171 GTTGAAGTCAAGCAAAAGGAAAG 57.044 39.130 0.00 0.00 36.39 2.62
4489 13581 4.321230 GCTGTAAATGGGGTTGAAGTCAAG 60.321 45.833 0.00 0.00 36.39 3.02
4490 13582 3.572255 GCTGTAAATGGGGTTGAAGTCAA 59.428 43.478 0.00 0.00 0.00 3.18
4491 13583 3.153919 GCTGTAAATGGGGTTGAAGTCA 58.846 45.455 0.00 0.00 0.00 3.41
4492 13584 2.492088 GGCTGTAAATGGGGTTGAAGTC 59.508 50.000 0.00 0.00 0.00 3.01
4493 13585 2.525368 GGCTGTAAATGGGGTTGAAGT 58.475 47.619 0.00 0.00 0.00 3.01
4494 13586 1.472480 CGGCTGTAAATGGGGTTGAAG 59.528 52.381 0.00 0.00 0.00 3.02
4495 13587 1.540267 CGGCTGTAAATGGGGTTGAA 58.460 50.000 0.00 0.00 0.00 2.69
4496 13588 0.963355 GCGGCTGTAAATGGGGTTGA 60.963 55.000 0.00 0.00 0.00 3.18
4497 13589 1.510844 GCGGCTGTAAATGGGGTTG 59.489 57.895 0.00 0.00 0.00 3.77
4498 13590 2.043980 CGCGGCTGTAAATGGGGTT 61.044 57.895 0.00 0.00 0.00 4.11
4499 13591 2.437716 CGCGGCTGTAAATGGGGT 60.438 61.111 0.00 0.00 0.00 4.95
4500 13592 3.209097 CCGCGGCTGTAAATGGGG 61.209 66.667 14.67 0.00 0.00 4.96
4501 13593 3.887868 GCCGCGGCTGTAAATGGG 61.888 66.667 41.71 4.32 38.26 4.00
4502 13594 3.130819 TGCCGCGGCTGTAAATGG 61.131 61.111 45.79 9.63 42.51 3.16
4503 13595 2.100216 GTGCCGCGGCTGTAAATG 59.900 61.111 45.79 10.45 42.51 2.32
4504 13596 2.359354 TGTGCCGCGGCTGTAAAT 60.359 55.556 45.79 0.00 42.51 1.40
4505 13597 3.047280 CTGTGCCGCGGCTGTAAA 61.047 61.111 45.79 26.98 42.51 2.01
4517 13609 1.936547 GCAATAGTACTCTGGCTGTGC 59.063 52.381 0.00 0.00 0.00 4.57
4518 13610 3.193263 CTGCAATAGTACTCTGGCTGTG 58.807 50.000 8.91 0.00 0.00 3.66
4519 13611 2.834549 ACTGCAATAGTACTCTGGCTGT 59.165 45.455 12.61 12.61 38.04 4.40
4520 13612 3.533606 ACTGCAATAGTACTCTGGCTG 57.466 47.619 11.52 11.52 38.04 4.85
4521 13613 4.559862 AAACTGCAATAGTACTCTGGCT 57.440 40.909 8.91 0.00 39.18 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.