Multiple sequence alignment - TraesCS5A01G360900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G360900 chr5A 100.000 9312 0 0 1 9312 562381904 562391215 0.000000e+00 17197.0
1 TraesCS5A01G360900 chr5A 92.308 234 14 4 4559 4792 693649662 693649433 6.970000e-86 329.0
2 TraesCS5A01G360900 chr5A 89.552 67 7 0 8737 8803 688478943 688478877 1.670000e-12 86.1
3 TraesCS5A01G360900 chr5D 94.818 3898 117 33 4881 8720 445106651 445110521 0.000000e+00 6000.0
4 TraesCS5A01G360900 chr5D 98.201 1723 21 6 3167 4882 445104770 445106489 0.000000e+00 3001.0
5 TraesCS5A01G360900 chr5D 97.190 1210 33 1 1965 3173 445103374 445104583 0.000000e+00 2045.0
6 TraesCS5A01G360900 chr5D 94.324 1057 43 10 872 1917 445102326 445103376 0.000000e+00 1604.0
7 TraesCS5A01G360900 chr5D 94.799 846 38 4 1 845 445101377 445102217 0.000000e+00 1314.0
8 TraesCS5A01G360900 chr5D 90.411 73 2 4 794 864 445102199 445102268 3.580000e-14 91.6
9 TraesCS5A01G360900 chr5B 84.904 3597 299 128 4866 8306 542685050 542688558 0.000000e+00 3410.0
10 TraesCS5A01G360900 chr5B 88.848 1641 129 29 2944 4557 542683304 542684917 0.000000e+00 1967.0
11 TraesCS5A01G360900 chr5B 87.435 1154 81 32 868 1994 542681190 542682306 0.000000e+00 1269.0
12 TraesCS5A01G360900 chr5B 86.616 919 96 13 2038 2938 542682296 542683205 0.000000e+00 990.0
13 TraesCS5A01G360900 chr5B 90.470 745 56 10 1 738 542679604 542680340 0.000000e+00 968.0
14 TraesCS5A01G360900 chr5B 83.721 344 38 14 470 809 542680784 542681113 9.080000e-80 309.0
15 TraesCS5A01G360900 chr5B 89.270 233 22 2 4559 4791 710209697 710209926 1.180000e-73 289.0
16 TraesCS5A01G360900 chr5B 88.136 59 5 2 810 866 542681079 542681137 1.680000e-07 69.4
17 TraesCS5A01G360900 chr6A 84.517 1098 113 34 3432 4510 617145906 617144847 0.000000e+00 1033.0
18 TraesCS5A01G360900 chr6A 84.675 646 86 11 2734 3374 617146558 617145921 4.740000e-177 632.0
19 TraesCS5A01G360900 chr6A 90.086 232 16 2 4560 4791 199160553 199160777 2.540000e-75 294.0
20 TraesCS5A01G360900 chr6A 80.992 242 37 7 2095 2328 617146797 617146557 5.740000e-42 183.0
21 TraesCS5A01G360900 chr6D 80.216 834 92 35 5030 5837 472534978 472535764 8.170000e-155 558.0
22 TraesCS5A01G360900 chr6D 87.675 357 29 8 5891 6245 472536001 472536344 1.460000e-107 401.0
23 TraesCS5A01G360900 chr6D 89.030 237 17 4 4560 4796 79823939 79823712 1.530000e-72 285.0
24 TraesCS5A01G360900 chr6D 90.821 207 18 1 4334 4539 472534762 472534968 9.210000e-70 276.0
25 TraesCS5A01G360900 chr6D 87.192 203 26 0 6311 6513 472536356 472536558 2.020000e-56 231.0
26 TraesCS5A01G360900 chr6D 92.708 96 6 1 1500 1595 472533880 472533974 4.530000e-28 137.0
27 TraesCS5A01G360900 chr6D 83.562 146 10 7 1303 1441 472533668 472533806 3.530000e-24 124.0
28 TraesCS5A01G360900 chr6B 85.784 408 55 3 2736 3141 717549806 717550212 6.680000e-116 429.0
29 TraesCS5A01G360900 chr6B 88.562 306 30 3 3432 3737 717550367 717550667 5.310000e-97 366.0
30 TraesCS5A01G360900 chr3D 96.070 229 7 2 4558 4785 418784733 418784960 1.140000e-98 372.0
31 TraesCS5A01G360900 chr3D 91.102 236 11 7 4560 4794 396215531 396215757 2.520000e-80 311.0
32 TraesCS5A01G360900 chr2B 93.886 229 13 1 4553 4781 245996224 245996451 2.490000e-90 344.0
33 TraesCS5A01G360900 chr3A 89.744 234 19 4 4559 4792 515951578 515951806 2.540000e-75 294.0
34 TraesCS5A01G360900 chr3A 87.500 192 19 3 9126 9312 734029604 734029795 5.660000e-52 217.0
35 TraesCS5A01G360900 chr4A 87.302 189 20 2 9126 9310 658418018 658417830 7.320000e-51 213.0
36 TraesCS5A01G360900 chr7A 86.458 192 21 3 9126 9312 159694071 159693880 1.230000e-48 206.0
37 TraesCS5A01G360900 chr1D 82.018 228 29 5 5113 5329 473749952 473750178 5.740000e-42 183.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G360900 chr5A 562381904 562391215 9311 False 17197.000000 17197 100.000000 1 9312 1 chr5A.!!$F1 9311
1 TraesCS5A01G360900 chr5D 445101377 445110521 9144 False 2342.600000 6000 94.957167 1 8720 6 chr5D.!!$F1 8719
2 TraesCS5A01G360900 chr5B 542679604 542688558 8954 False 1283.200000 3410 87.161429 1 8306 7 chr5B.!!$F2 8305
3 TraesCS5A01G360900 chr6A 617144847 617146797 1950 True 616.000000 1033 83.394667 2095 4510 3 chr6A.!!$R1 2415
4 TraesCS5A01G360900 chr6D 472533668 472536558 2890 False 287.833333 558 87.029000 1303 6513 6 chr6D.!!$F1 5210
5 TraesCS5A01G360900 chr6B 717549806 717550667 861 False 397.500000 429 87.173000 2736 3737 2 chr6B.!!$F1 1001

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
736 1439 1.010462 GAAAACCACACGCCGTCAC 60.010 57.895 0.00 0.0 0.00 3.67 F
1432 2244 0.382515 CTCCGAGGACGAGGTGATTC 59.617 60.000 0.00 0.0 42.66 2.52 F
2024 2993 0.482446 TGGTTCAGTGCCCCAGATTT 59.518 50.000 0.00 0.0 0.00 2.17 F
3788 5123 0.685660 TGCCATCATTTTGCAAGCCA 59.314 45.000 0.00 0.0 30.85 4.75 F
3802 5137 2.223433 GCAAGCCATGTCATGCTTACTC 60.223 50.000 16.88 9.4 45.59 2.59 F
4785 6226 0.669318 ACACGTGTGGCAGTTATCGG 60.669 55.000 22.71 0.0 34.19 4.18 F
5973 7854 1.339247 CCCCGCCAACATAGTGTGTAA 60.339 52.381 0.00 0.0 41.14 2.41 F
6751 8672 0.885196 TACGGGCAACATGCTTTTCC 59.115 50.000 2.00 0.0 44.28 3.13 F
7805 9805 1.092348 GGATCCAACTTTGTACGCCC 58.908 55.000 6.95 0.0 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1708 2533 0.682852 AGCACGTAGTAAGTTGGGCA 59.317 50.000 0.00 0.00 41.61 5.36 R
3074 4189 1.303317 GAACCCGTGACCTGCCAAT 60.303 57.895 0.00 0.00 0.00 3.16 R
3802 5137 1.734465 AGATTGCCGAGAAGCTTTTCG 59.266 47.619 27.41 27.41 36.62 3.46 R
4715 6155 1.821216 ACACTAAAGTTGCCATCCGG 58.179 50.000 0.00 0.00 0.00 5.14 R
5009 6663 2.207229 AAAGGGGCCTTTTCACGGC 61.207 57.895 7.97 0.00 42.93 5.68 R
6751 8672 2.945080 ATAGGTGCCCACATCAGATG 57.055 50.000 9.03 9.03 0.00 2.90 R
7791 9791 1.535462 CCTTCTGGGCGTACAAAGTTG 59.465 52.381 0.00 0.00 0.00 3.16 R
8043 10051 0.108662 AGCATCGTCATCAGTCGCAA 60.109 50.000 0.00 0.00 0.00 4.85 R
9026 11070 0.031314 CGATCCACCTCGATCCAGTG 59.969 60.000 0.00 0.00 41.12 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 1.343478 ACCGAGGAGATGGGATTGAGT 60.343 52.381 0.00 0.00 0.00 3.41
90 91 1.631898 GGGGCAGAGTTAACAAGGGTA 59.368 52.381 8.61 0.00 0.00 3.69
201 206 6.487668 CCAGATAAGATGTTGATTGCCATACA 59.512 38.462 0.00 0.00 0.00 2.29
212 217 8.693625 TGTTGATTGCCATACATGAATTGATTA 58.306 29.630 0.00 0.00 0.00 1.75
254 259 4.706962 GGGTTTGTCTGGCTAGATGAAAAT 59.293 41.667 2.00 0.00 34.94 1.82
290 295 4.524802 ACCCAGGAGCATATGAAAATCA 57.475 40.909 6.97 0.00 0.00 2.57
346 351 3.632333 ACGATGTAAGATGGGAGACAGA 58.368 45.455 0.00 0.00 0.00 3.41
412 417 9.778741 CATTTCCATACTCTGGCTAAGTATTTA 57.221 33.333 8.90 0.59 45.52 1.40
497 504 8.485613 AAGGACGACTTGATGCATAAGCAAAC 62.486 42.308 0.00 0.00 46.26 2.93
519 526 3.064545 CGGATCAAGCTAGCTTTCTTTGG 59.935 47.826 27.34 14.85 33.42 3.28
587 595 6.987992 CCACCAGCTTAAATTATTGCATCATT 59.012 34.615 0.00 0.00 0.00 2.57
600 608 1.065199 GCATCATTGAGAGGGTGGTGA 60.065 52.381 0.00 0.00 0.00 4.02
684 692 1.279558 GAGGAGGAAAGGAGTGGGAAC 59.720 57.143 0.00 0.00 0.00 3.62
736 1439 1.010462 GAAAACCACACGCCGTCAC 60.010 57.895 0.00 0.00 0.00 3.67
1143 1932 2.391389 CGAAGAAGACAAGGCCGCC 61.391 63.158 0.00 0.00 0.00 6.13
1297 2086 1.264749 TAGCGCTGATGGGTTGTCCT 61.265 55.000 22.90 0.00 36.20 3.85
1432 2244 0.382515 CTCCGAGGACGAGGTGATTC 59.617 60.000 0.00 0.00 42.66 2.52
1470 2282 1.887344 TTAGTTGCGTACCCGGGGAC 61.887 60.000 27.61 27.61 33.68 4.46
1497 2315 4.642429 GGACGGACTATTATCAATTGGCT 58.358 43.478 5.42 0.00 0.00 4.75
1501 2319 5.215160 CGGACTATTATCAATTGGCTTTGC 58.785 41.667 5.42 0.00 0.00 3.68
1706 2531 2.304221 TGGCTGCTATATAGGGTCGT 57.696 50.000 11.72 0.00 0.00 4.34
1708 2533 1.893801 GGCTGCTATATAGGGTCGTGT 59.106 52.381 11.72 0.00 0.00 4.49
1722 2547 2.064014 GTCGTGTGCCCAACTTACTAC 58.936 52.381 0.00 0.00 0.00 2.73
1915 2884 5.705609 TGCCCAGTTCTGATTTTAAACTC 57.294 39.130 1.00 0.00 31.04 3.01
1919 2888 5.241506 CCCAGTTCTGATTTTAAACTCTGCA 59.758 40.000 7.05 0.00 31.04 4.41
1920 2889 6.071728 CCCAGTTCTGATTTTAAACTCTGCAT 60.072 38.462 7.05 0.00 31.04 3.96
1936 2905 8.586879 AACTCTGCATATACTCAGCTGATATA 57.413 34.615 18.63 19.12 36.02 0.86
1950 2919 3.885297 GCTGATATAAGAAAGCCTTGCCA 59.115 43.478 0.00 0.00 36.34 4.92
2024 2993 0.482446 TGGTTCAGTGCCCCAGATTT 59.518 50.000 0.00 0.00 0.00 2.17
2067 3036 6.834168 TTTTCCTCCCTTACATTCATTCAC 57.166 37.500 0.00 0.00 0.00 3.18
2078 3047 4.801891 ACATTCATTCACACATTGTCTGC 58.198 39.130 0.00 0.00 0.00 4.26
2289 3262 2.910319 TCCAGTAAGTGTACCTGCCAAT 59.090 45.455 0.00 0.00 0.00 3.16
2319 3295 8.726650 TCGAACATTTATTTGAAGTGTTCATG 57.273 30.769 19.27 9.05 45.38 3.07
2660 3654 5.647658 TGACTGGTTTGAATATGGTGATCAC 59.352 40.000 17.91 17.91 0.00 3.06
2697 3691 4.817318 TGCAATTTATGGTTTCCTTCCC 57.183 40.909 0.00 0.00 0.00 3.97
3074 4189 6.345096 TGTGAGACAGTGAACTCATGATTA 57.655 37.500 20.56 8.63 43.46 1.75
3203 4512 7.875316 TCAGATTGCGCTCTACTAATTTATC 57.125 36.000 9.73 0.00 0.00 1.75
3290 4600 5.999205 TTTGTGGGCAGTCATTGAATTAT 57.001 34.783 0.00 0.00 0.00 1.28
3788 5123 0.685660 TGCCATCATTTTGCAAGCCA 59.314 45.000 0.00 0.00 30.85 4.75
3802 5137 2.223433 GCAAGCCATGTCATGCTTACTC 60.223 50.000 16.88 9.40 45.59 2.59
3856 5191 4.739793 TGACCTCCCATTCTGTTGAAATT 58.260 39.130 0.00 0.00 35.63 1.82
4074 5415 9.525409 ACGGTATTACTTCTACATTGTCATTAC 57.475 33.333 0.00 0.00 0.00 1.89
4142 5486 4.214310 CATCACCCCTTTATATTGTGCCA 58.786 43.478 0.00 0.00 0.00 4.92
4785 6226 0.669318 ACACGTGTGGCAGTTATCGG 60.669 55.000 22.71 0.00 34.19 4.18
5009 6663 4.778213 TGTAGAAGGATGAGGAATTGGG 57.222 45.455 0.00 0.00 0.00 4.12
5064 6728 3.691118 TCTCATAAACTTGAGCATGGCAC 59.309 43.478 0.00 0.00 42.37 5.01
5426 7093 9.823647 AAGATGATGGTAATAGTAGTTGTCAAG 57.176 33.333 0.00 0.00 0.00 3.02
5843 7540 7.534085 AGATAATCATTTGCGACGTTTCTAA 57.466 32.000 0.00 0.00 0.00 2.10
5884 7764 9.409312 CAAAATTGGCTTTTCTTTCTTTGTTTT 57.591 25.926 0.00 0.00 34.80 2.43
5973 7854 1.339247 CCCCGCCAACATAGTGTGTAA 60.339 52.381 0.00 0.00 41.14 2.41
6377 8277 9.469097 TTGGTTAAATTAATGGTAGTGCTACAT 57.531 29.630 10.98 1.43 37.78 2.29
6517 8417 6.254373 GCCGTACAAGATGTTAAAGTACTACC 59.746 42.308 0.00 0.00 34.43 3.18
6608 8528 5.699839 CCAATGTTACTGTTTTAGGCAGTC 58.300 41.667 0.95 0.00 44.96 3.51
6739 8660 7.860918 TTAATAACAATGTACAATACGGGCA 57.139 32.000 0.00 0.00 0.00 5.36
6751 8672 0.885196 TACGGGCAACATGCTTTTCC 59.115 50.000 2.00 0.00 44.28 3.13
7003 8935 5.758296 CCAGTTTCAGTTACTGCTCTGTTTA 59.242 40.000 20.00 0.00 41.28 2.01
7373 9347 5.599359 TTGCGTAGACATTTCGATCAAAA 57.401 34.783 0.00 0.00 0.00 2.44
7408 9382 6.371389 GCAGTGGTTAAACTCTGTTTACATC 58.629 40.000 20.50 2.35 0.00 3.06
7450 9427 7.201767 GGAAGAATGCAAGTCATATACTTTGCT 60.202 37.037 14.49 1.05 46.61 3.91
7468 9445 2.036217 TGCTTTGAACCTTGCATTCTGG 59.964 45.455 0.00 0.00 0.00 3.86
7469 9446 2.297033 GCTTTGAACCTTGCATTCTGGA 59.703 45.455 0.00 0.00 0.00 3.86
7470 9447 3.613432 GCTTTGAACCTTGCATTCTGGAG 60.613 47.826 0.00 0.00 0.00 3.86
7472 9449 2.783135 TGAACCTTGCATTCTGGAGTC 58.217 47.619 0.00 0.00 0.00 3.36
7473 9450 2.087646 GAACCTTGCATTCTGGAGTCC 58.912 52.381 0.73 0.73 0.00 3.85
7475 9452 1.280421 ACCTTGCATTCTGGAGTCCTC 59.720 52.381 11.33 0.00 0.00 3.71
7488 9472 4.181309 GGAGTCCTCGAATCCATATGAC 57.819 50.000 3.65 0.00 44.94 3.06
7490 9474 3.223435 AGTCCTCGAATCCATATGACGT 58.777 45.455 3.65 0.00 0.00 4.34
7531 9515 1.097232 TGTGCTTGTGCTGATATGCC 58.903 50.000 0.00 0.00 40.48 4.40
7668 9664 5.097742 AGCCTGTAATGTTGTAGCATGTA 57.902 39.130 0.00 0.00 0.00 2.29
7791 9791 2.442236 TCAAGATTTGGGCAGGATCC 57.558 50.000 2.48 2.48 0.00 3.36
7804 9804 1.737793 CAGGATCCAACTTTGTACGCC 59.262 52.381 15.82 0.00 0.00 5.68
7805 9805 1.092348 GGATCCAACTTTGTACGCCC 58.908 55.000 6.95 0.00 0.00 6.13
7826 9826 8.380099 ACGCCCAGAAGGAAATATGTATTTATA 58.620 33.333 0.00 0.00 36.13 0.98
8043 10051 4.810790 CCGACTCGATGATTAGGCTTTAT 58.189 43.478 0.00 0.00 0.00 1.40
8092 10101 5.163416 GGAGCATACATTTTAGGTGCCAATT 60.163 40.000 0.00 0.00 36.50 2.32
8095 10104 6.155049 AGCATACATTTTAGGTGCCAATTTCT 59.845 34.615 0.00 0.00 36.50 2.52
8099 10108 5.708230 ACATTTTAGGTGCCAATTTCTACGA 59.292 36.000 0.00 0.00 0.00 3.43
8143 10154 1.342174 TCTACCGTTTCGCCAAGAGTT 59.658 47.619 0.00 0.00 0.00 3.01
8153 10164 1.672356 CCAAGAGTTGCAGACCGGG 60.672 63.158 6.32 0.00 0.00 5.73
8267 10280 3.539604 ACAATTAGATGAGGTGCAGAGC 58.460 45.455 0.00 0.00 0.00 4.09
8296 10312 2.708861 TGTAATGACAACAGGGAGTGGT 59.291 45.455 0.00 0.00 36.99 4.16
8312 10328 3.997681 GAGTGGTAAGAGAAGTTTGAGCC 59.002 47.826 0.00 0.00 0.00 4.70
8313 10329 3.648545 AGTGGTAAGAGAAGTTTGAGCCT 59.351 43.478 0.00 0.00 0.00 4.58
8315 10331 4.822350 GTGGTAAGAGAAGTTTGAGCCTTT 59.178 41.667 0.00 0.00 0.00 3.11
8316 10332 5.299531 GTGGTAAGAGAAGTTTGAGCCTTTT 59.700 40.000 0.00 0.00 0.00 2.27
8317 10333 5.299279 TGGTAAGAGAAGTTTGAGCCTTTTG 59.701 40.000 0.00 0.00 0.00 2.44
8369 10411 2.361992 CCAGGCCAATGCAGCTGA 60.362 61.111 20.43 2.70 40.13 4.26
8440 10482 1.078356 CTCTGTGCTGAGCCATGCT 60.078 57.895 0.23 0.00 43.88 3.79
8570 10612 4.252073 GCAATGAATGTTATGTTTGGGCA 58.748 39.130 0.00 0.00 0.00 5.36
8590 10632 4.430137 CACAATTGCAGCAGAGTTATGT 57.570 40.909 5.05 0.00 0.00 2.29
8620 10664 7.761368 GCAATCGCAGCAGTGTAACTTTCTT 62.761 44.000 0.00 0.00 41.46 2.52
8637 10681 2.091541 TCTTGGACGATTTTGATGGCC 58.908 47.619 0.00 0.00 0.00 5.36
8639 10683 1.750193 TGGACGATTTTGATGGCCTC 58.250 50.000 3.32 0.00 0.00 4.70
8644 10688 4.130118 GACGATTTTGATGGCCTCTACAT 58.870 43.478 3.32 0.00 0.00 2.29
8645 10689 3.879295 ACGATTTTGATGGCCTCTACATG 59.121 43.478 3.32 0.00 0.00 3.21
8647 10691 5.056480 CGATTTTGATGGCCTCTACATGTA 58.944 41.667 3.32 5.25 0.00 2.29
8651 10695 8.995027 ATTTTGATGGCCTCTACATGTAATTA 57.005 30.769 3.32 0.00 0.00 1.40
8670 10714 7.986320 TGTAATTATGATTTTGATTTGCAGGGG 59.014 33.333 0.00 0.00 0.00 4.79
8672 10716 3.681593 TGATTTTGATTTGCAGGGGTG 57.318 42.857 0.00 0.00 0.00 4.61
8683 10727 0.679505 GCAGGGGTGTCGCATAGATA 59.320 55.000 0.00 0.00 0.00 1.98
8686 10730 0.037232 GGGGTGTCGCATAGATAGGC 60.037 60.000 0.00 0.00 0.00 3.93
8694 10738 1.151668 GCATAGATAGGCGCAGGTTG 58.848 55.000 10.83 0.00 0.00 3.77
8701 10745 2.252072 TAGGCGCAGGTTGGGATGAC 62.252 60.000 10.83 0.00 31.21 3.06
8714 10758 0.742990 GGATGACGCCGAATTGTGGA 60.743 55.000 0.00 0.00 0.00 4.02
8720 10764 0.462937 CGCCGAATTGTGGATACCCA 60.463 55.000 0.00 0.00 40.95 4.51
8721 10765 1.308998 GCCGAATTGTGGATACCCAG 58.691 55.000 0.00 0.00 44.55 4.45
8722 10766 1.408266 GCCGAATTGTGGATACCCAGT 60.408 52.381 0.00 0.00 44.55 4.00
8723 10767 2.158871 GCCGAATTGTGGATACCCAGTA 60.159 50.000 0.00 0.00 44.55 2.74
8724 10768 3.683281 GCCGAATTGTGGATACCCAGTAA 60.683 47.826 0.00 0.00 44.55 2.24
8725 10769 3.875134 CCGAATTGTGGATACCCAGTAAC 59.125 47.826 0.00 0.00 44.55 2.50
8726 10770 4.383770 CCGAATTGTGGATACCCAGTAACT 60.384 45.833 0.00 0.00 44.55 2.24
8727 10771 4.809426 CGAATTGTGGATACCCAGTAACTC 59.191 45.833 0.00 0.00 44.55 3.01
8728 10772 5.625886 CGAATTGTGGATACCCAGTAACTCA 60.626 44.000 0.00 0.00 44.55 3.41
8729 10773 5.772393 ATTGTGGATACCCAGTAACTCAA 57.228 39.130 0.00 0.00 44.55 3.02
8730 10774 4.546829 TGTGGATACCCAGTAACTCAAC 57.453 45.455 0.00 0.00 44.55 3.18
8731 10775 4.164981 TGTGGATACCCAGTAACTCAACT 58.835 43.478 0.00 0.00 44.55 3.16
8732 10776 4.595781 TGTGGATACCCAGTAACTCAACTT 59.404 41.667 0.00 0.00 44.55 2.66
8733 10777 5.781306 TGTGGATACCCAGTAACTCAACTTA 59.219 40.000 0.00 0.00 44.55 2.24
8734 10778 6.270463 TGTGGATACCCAGTAACTCAACTTAA 59.730 38.462 0.00 0.00 44.55 1.85
8735 10779 6.817140 GTGGATACCCAGTAACTCAACTTAAG 59.183 42.308 0.00 0.00 44.55 1.85
8736 10780 5.816258 GGATACCCAGTAACTCAACTTAAGC 59.184 44.000 1.29 0.00 0.00 3.09
8737 10781 4.699925 ACCCAGTAACTCAACTTAAGCA 57.300 40.909 1.29 0.00 0.00 3.91
8738 10782 5.043737 ACCCAGTAACTCAACTTAAGCAA 57.956 39.130 1.29 0.00 0.00 3.91
8739 10783 5.063880 ACCCAGTAACTCAACTTAAGCAAG 58.936 41.667 1.29 0.14 37.81 4.01
8741 10785 5.049405 CCCAGTAACTCAACTTAAGCAAGTG 60.049 44.000 1.29 0.00 44.41 3.16
8742 10786 5.527582 CCAGTAACTCAACTTAAGCAAGTGT 59.472 40.000 1.29 0.00 44.41 3.55
8743 10787 6.038271 CCAGTAACTCAACTTAAGCAAGTGTT 59.962 38.462 1.29 8.36 44.41 3.32
8744 10788 6.907212 CAGTAACTCAACTTAAGCAAGTGTTG 59.093 38.462 1.29 0.00 44.41 3.33
8756 10800 2.862512 CAAGTGTTGCAAAACTCGTGT 58.137 42.857 22.46 4.24 0.00 4.49
8757 10801 2.542766 AGTGTTGCAAAACTCGTGTG 57.457 45.000 16.88 0.00 0.00 3.82
8758 10802 2.080693 AGTGTTGCAAAACTCGTGTGA 58.919 42.857 16.88 0.00 0.00 3.58
8759 10803 2.682856 AGTGTTGCAAAACTCGTGTGAT 59.317 40.909 16.88 0.00 0.00 3.06
8760 10804 3.874543 AGTGTTGCAAAACTCGTGTGATA 59.125 39.130 16.88 0.00 0.00 2.15
8761 10805 4.334203 AGTGTTGCAAAACTCGTGTGATAA 59.666 37.500 16.88 0.00 0.00 1.75
8762 10806 5.008613 AGTGTTGCAAAACTCGTGTGATAAT 59.991 36.000 16.88 0.00 0.00 1.28
8763 10807 6.203915 AGTGTTGCAAAACTCGTGTGATAATA 59.796 34.615 16.88 0.00 0.00 0.98
8764 10808 7.021196 GTGTTGCAAAACTCGTGTGATAATAT 58.979 34.615 12.75 0.00 0.00 1.28
8765 10809 8.172484 GTGTTGCAAAACTCGTGTGATAATATA 58.828 33.333 12.75 0.00 0.00 0.86
8766 10810 8.888716 TGTTGCAAAACTCGTGTGATAATATAT 58.111 29.630 0.00 0.00 0.00 0.86
8767 10811 9.158364 GTTGCAAAACTCGTGTGATAATATATG 57.842 33.333 0.00 0.00 0.00 1.78
8768 10812 7.860613 TGCAAAACTCGTGTGATAATATATGG 58.139 34.615 0.00 0.00 0.00 2.74
8769 10813 7.497579 TGCAAAACTCGTGTGATAATATATGGT 59.502 33.333 0.00 0.00 0.00 3.55
8770 10814 8.984764 GCAAAACTCGTGTGATAATATATGGTA 58.015 33.333 0.00 0.00 0.00 3.25
8792 10836 9.653287 TGGTAAAGATAGTCACAATCTAAACAG 57.347 33.333 0.00 0.00 33.32 3.16
8793 10837 8.604890 GGTAAAGATAGTCACAATCTAAACAGC 58.395 37.037 0.00 0.00 33.32 4.40
8794 10838 7.617041 AAAGATAGTCACAATCTAAACAGCC 57.383 36.000 0.00 0.00 33.32 4.85
8795 10839 5.675538 AGATAGTCACAATCTAAACAGCCC 58.324 41.667 0.00 0.00 31.88 5.19
8796 10840 3.073274 AGTCACAATCTAAACAGCCCC 57.927 47.619 0.00 0.00 0.00 5.80
8797 10841 2.644798 AGTCACAATCTAAACAGCCCCT 59.355 45.455 0.00 0.00 0.00 4.79
8798 10842 3.074538 AGTCACAATCTAAACAGCCCCTT 59.925 43.478 0.00 0.00 0.00 3.95
8799 10843 4.288626 AGTCACAATCTAAACAGCCCCTTA 59.711 41.667 0.00 0.00 0.00 2.69
8800 10844 5.007682 GTCACAATCTAAACAGCCCCTTAA 58.992 41.667 0.00 0.00 0.00 1.85
8801 10845 5.652452 GTCACAATCTAAACAGCCCCTTAAT 59.348 40.000 0.00 0.00 0.00 1.40
8802 10846 6.152831 GTCACAATCTAAACAGCCCCTTAATT 59.847 38.462 0.00 0.00 0.00 1.40
8803 10847 6.152661 TCACAATCTAAACAGCCCCTTAATTG 59.847 38.462 0.00 0.00 0.00 2.32
8804 10848 6.152661 CACAATCTAAACAGCCCCTTAATTGA 59.847 38.462 0.00 0.00 0.00 2.57
8805 10849 6.723977 ACAATCTAAACAGCCCCTTAATTGAA 59.276 34.615 0.00 0.00 0.00 2.69
8806 10850 7.093771 ACAATCTAAACAGCCCCTTAATTGAAG 60.094 37.037 0.00 0.00 34.63 3.02
8807 10851 5.887754 TCTAAACAGCCCCTTAATTGAAGT 58.112 37.500 0.00 0.00 32.74 3.01
8808 10852 6.311735 TCTAAACAGCCCCTTAATTGAAGTT 58.688 36.000 0.00 0.00 32.74 2.66
8809 10853 4.871933 AACAGCCCCTTAATTGAAGTTG 57.128 40.909 0.00 0.00 32.74 3.16
8810 10854 3.165071 ACAGCCCCTTAATTGAAGTTGG 58.835 45.455 0.00 0.00 32.74 3.77
8811 10855 2.497273 CAGCCCCTTAATTGAAGTTGGG 59.503 50.000 0.00 0.00 38.87 4.12
8815 10859 4.801330 CCCTTAATTGAAGTTGGGGAAC 57.199 45.455 0.00 0.00 34.71 3.62
8816 10860 3.192633 CCCTTAATTGAAGTTGGGGAACG 59.807 47.826 0.00 0.00 34.71 3.95
8817 10861 3.366985 CCTTAATTGAAGTTGGGGAACGC 60.367 47.826 0.00 0.00 36.04 4.84
8818 10862 0.966179 AATTGAAGTTGGGGAACGCC 59.034 50.000 0.85 0.85 42.25 5.68
8819 10863 1.241315 ATTGAAGTTGGGGAACGCCG 61.241 55.000 3.62 0.00 42.25 6.46
8820 10864 2.031465 GAAGTTGGGGAACGCCGA 59.969 61.111 0.00 0.00 42.25 5.54
8821 10865 1.598685 GAAGTTGGGGAACGCCGAA 60.599 57.895 0.00 0.00 42.25 4.30
8822 10866 1.848932 GAAGTTGGGGAACGCCGAAC 61.849 60.000 0.00 0.00 42.25 3.95
8823 10867 2.592287 GTTGGGGAACGCCGAACA 60.592 61.111 0.00 0.00 42.25 3.18
8824 10868 1.969589 GTTGGGGAACGCCGAACAT 60.970 57.895 0.00 0.00 42.25 2.71
8825 10869 1.969064 TTGGGGAACGCCGAACATG 60.969 57.895 0.00 0.00 42.25 3.21
8826 10870 3.810896 GGGGAACGCCGAACATGC 61.811 66.667 0.00 0.00 34.11 4.06
8827 10871 3.053291 GGGAACGCCGAACATGCA 61.053 61.111 0.00 0.00 33.83 3.96
8828 10872 2.622011 GGGAACGCCGAACATGCAA 61.622 57.895 0.00 0.00 33.83 4.08
8829 10873 1.442017 GGAACGCCGAACATGCAAC 60.442 57.895 0.00 0.00 0.00 4.17
8830 10874 1.281353 GAACGCCGAACATGCAACA 59.719 52.632 0.00 0.00 0.00 3.33
8831 10875 0.725784 GAACGCCGAACATGCAACAG 60.726 55.000 0.00 0.00 0.00 3.16
8832 10876 2.128853 AACGCCGAACATGCAACAGG 62.129 55.000 0.00 0.00 0.00 4.00
8833 10877 2.616330 CGCCGAACATGCAACAGGT 61.616 57.895 0.00 0.00 0.00 4.00
8834 10878 1.081242 GCCGAACATGCAACAGGTG 60.081 57.895 0.00 0.00 0.00 4.00
8835 10879 1.580942 CCGAACATGCAACAGGTGG 59.419 57.895 0.00 0.00 0.00 4.61
8836 10880 1.580942 CGAACATGCAACAGGTGGG 59.419 57.895 0.00 0.00 0.00 4.61
8837 10881 1.290009 GAACATGCAACAGGTGGGC 59.710 57.895 0.00 0.00 0.00 5.36
8838 10882 1.152483 AACATGCAACAGGTGGGCT 60.152 52.632 0.00 0.00 0.00 5.19
8839 10883 0.760189 AACATGCAACAGGTGGGCTT 60.760 50.000 0.00 0.00 0.00 4.35
8840 10884 1.290955 CATGCAACAGGTGGGCTTG 59.709 57.895 0.00 0.00 0.00 4.01
8841 10885 1.153524 ATGCAACAGGTGGGCTTGA 59.846 52.632 0.00 0.00 0.00 3.02
8842 10886 0.469705 ATGCAACAGGTGGGCTTGAA 60.470 50.000 0.00 0.00 0.00 2.69
8843 10887 0.685785 TGCAACAGGTGGGCTTGAAA 60.686 50.000 0.00 0.00 0.00 2.69
8844 10888 0.463620 GCAACAGGTGGGCTTGAAAA 59.536 50.000 0.00 0.00 0.00 2.29
8845 10889 1.134551 GCAACAGGTGGGCTTGAAAAA 60.135 47.619 0.00 0.00 0.00 1.94
8846 10890 2.485302 GCAACAGGTGGGCTTGAAAAAT 60.485 45.455 0.00 0.00 0.00 1.82
8847 10891 3.392882 CAACAGGTGGGCTTGAAAAATC 58.607 45.455 0.00 0.00 0.00 2.17
8848 10892 2.962859 ACAGGTGGGCTTGAAAAATCT 58.037 42.857 0.00 0.00 0.00 2.40
8849 10893 2.629617 ACAGGTGGGCTTGAAAAATCTG 59.370 45.455 0.00 0.00 0.00 2.90
8850 10894 2.629617 CAGGTGGGCTTGAAAAATCTGT 59.370 45.455 0.00 0.00 0.00 3.41
8851 10895 3.070015 CAGGTGGGCTTGAAAAATCTGTT 59.930 43.478 0.00 0.00 0.00 3.16
8852 10896 3.321968 AGGTGGGCTTGAAAAATCTGTTC 59.678 43.478 0.00 0.00 0.00 3.18
8853 10897 3.554960 GGTGGGCTTGAAAAATCTGTTCC 60.555 47.826 0.00 0.00 0.00 3.62
8854 10898 3.321968 GTGGGCTTGAAAAATCTGTTCCT 59.678 43.478 0.00 0.00 0.00 3.36
8855 10899 3.321682 TGGGCTTGAAAAATCTGTTCCTG 59.678 43.478 0.00 0.00 0.00 3.86
8856 10900 3.306294 GGGCTTGAAAAATCTGTTCCTGG 60.306 47.826 0.00 0.00 0.00 4.45
8857 10901 3.321968 GGCTTGAAAAATCTGTTCCTGGT 59.678 43.478 0.00 0.00 0.00 4.00
8858 10902 4.301628 GCTTGAAAAATCTGTTCCTGGTG 58.698 43.478 0.00 0.00 0.00 4.17
8859 10903 4.797275 GCTTGAAAAATCTGTTCCTGGTGG 60.797 45.833 0.00 0.00 0.00 4.61
8860 10904 4.177537 TGAAAAATCTGTTCCTGGTGGA 57.822 40.909 0.00 0.00 41.36 4.02
8861 10905 3.888930 TGAAAAATCTGTTCCTGGTGGAC 59.111 43.478 0.00 0.00 43.06 4.02
8862 10906 2.185004 AAATCTGTTCCTGGTGGACG 57.815 50.000 0.00 0.00 43.06 4.79
8863 10907 0.321653 AATCTGTTCCTGGTGGACGC 60.322 55.000 0.00 0.00 43.06 5.19
8864 10908 2.185310 ATCTGTTCCTGGTGGACGCC 62.185 60.000 0.00 0.00 43.06 5.68
8865 10909 2.847234 TGTTCCTGGTGGACGCCT 60.847 61.111 3.31 0.00 43.06 5.52
8866 10910 2.047179 GTTCCTGGTGGACGCCTC 60.047 66.667 3.31 0.00 43.06 4.70
8867 10911 3.691342 TTCCTGGTGGACGCCTCG 61.691 66.667 3.31 0.00 43.06 4.63
8873 10917 4.803426 GTGGACGCCTCGCCAGAG 62.803 72.222 0.00 0.00 43.98 3.35
8882 10926 4.441695 TCGCCAGAGAAGCTGCGG 62.442 66.667 13.08 0.00 43.50 5.69
8883 10927 4.749310 CGCCAGAGAAGCTGCGGT 62.749 66.667 6.00 0.00 43.50 5.68
8884 10928 3.123620 GCCAGAGAAGCTGCGGTG 61.124 66.667 0.00 0.00 43.50 4.94
8885 10929 3.123620 CCAGAGAAGCTGCGGTGC 61.124 66.667 0.00 0.00 43.50 5.01
8886 10930 2.047465 CAGAGAAGCTGCGGTGCT 60.047 61.111 0.00 0.00 46.40 4.40
8887 10931 2.099431 CAGAGAAGCTGCGGTGCTC 61.099 63.158 7.42 7.42 43.24 4.26
8888 10932 2.047844 GAGAAGCTGCGGTGCTCA 60.048 61.111 9.84 0.00 43.24 4.26
8889 10933 2.358003 AGAAGCTGCGGTGCTCAC 60.358 61.111 0.00 0.00 43.24 3.51
8908 10952 2.359230 GGCAGTGCCTGAGGTCAC 60.359 66.667 27.48 15.28 46.69 3.67
8909 10953 2.740055 GCAGTGCCTGAGGTCACG 60.740 66.667 16.50 13.33 35.81 4.35
8910 10954 2.740055 CAGTGCCTGAGGTCACGC 60.740 66.667 16.50 1.03 35.81 5.34
8911 10955 4.363990 AGTGCCTGAGGTCACGCG 62.364 66.667 16.50 3.53 35.81 6.01
8934 10978 2.376842 GGGGGAGGGGAGGATCAA 59.623 66.667 0.00 0.00 36.25 2.57
8935 10979 1.308746 GGGGGAGGGGAGGATCAAA 60.309 63.158 0.00 0.00 36.25 2.69
8936 10980 1.646367 GGGGGAGGGGAGGATCAAAC 61.646 65.000 0.00 0.00 36.25 2.93
8937 10981 0.919289 GGGGAGGGGAGGATCAAACA 60.919 60.000 0.00 0.00 36.25 2.83
8938 10982 0.999712 GGGAGGGGAGGATCAAACAA 59.000 55.000 0.00 0.00 36.25 2.83
8939 10983 1.064389 GGGAGGGGAGGATCAAACAAG 60.064 57.143 0.00 0.00 36.25 3.16
8940 10984 1.064389 GGAGGGGAGGATCAAACAAGG 60.064 57.143 0.00 0.00 36.25 3.61
8941 10985 1.916181 GAGGGGAGGATCAAACAAGGA 59.084 52.381 0.00 0.00 36.25 3.36
8942 10986 1.918957 AGGGGAGGATCAAACAAGGAG 59.081 52.381 0.00 0.00 36.25 3.69
8943 10987 1.683319 GGGGAGGATCAAACAAGGAGC 60.683 57.143 0.00 0.00 36.25 4.70
8944 10988 1.683319 GGGAGGATCAAACAAGGAGCC 60.683 57.143 0.00 0.00 41.11 4.70
8945 10989 1.004745 GGAGGATCAAACAAGGAGCCA 59.995 52.381 0.00 0.00 43.21 4.75
8946 10990 2.363683 GAGGATCAAACAAGGAGCCAG 58.636 52.381 0.00 0.00 43.21 4.85
8947 10991 1.005215 AGGATCAAACAAGGAGCCAGG 59.995 52.381 0.00 0.00 43.21 4.45
8948 10992 1.467920 GATCAAACAAGGAGCCAGGG 58.532 55.000 0.00 0.00 0.00 4.45
8949 10993 1.004745 GATCAAACAAGGAGCCAGGGA 59.995 52.381 0.00 0.00 0.00 4.20
8950 10994 0.401738 TCAAACAAGGAGCCAGGGAG 59.598 55.000 0.00 0.00 0.00 4.30
8951 10995 0.610232 CAAACAAGGAGCCAGGGAGG 60.610 60.000 0.00 0.00 41.84 4.30
8952 10996 1.793820 AAACAAGGAGCCAGGGAGGG 61.794 60.000 0.00 0.00 38.09 4.30
8953 10997 2.285668 CAAGGAGCCAGGGAGGGA 60.286 66.667 0.00 0.00 38.09 4.20
8954 10998 2.041928 AAGGAGCCAGGGAGGGAG 59.958 66.667 0.00 0.00 38.09 4.30
8955 10999 3.649652 AAGGAGCCAGGGAGGGAGG 62.650 68.421 0.00 0.00 38.09 4.30
8956 11000 4.423209 GGAGCCAGGGAGGGAGGT 62.423 72.222 0.00 0.00 38.09 3.85
8957 11001 2.766229 GAGCCAGGGAGGGAGGTC 60.766 72.222 0.00 0.00 38.09 3.85
8958 11002 4.787280 AGCCAGGGAGGGAGGTCG 62.787 72.222 0.00 0.00 38.09 4.79
8959 11003 4.779733 GCCAGGGAGGGAGGTCGA 62.780 72.222 0.00 0.00 38.09 4.20
8960 11004 2.443016 CCAGGGAGGGAGGTCGAG 60.443 72.222 0.00 0.00 0.00 4.04
8961 11005 2.360980 CAGGGAGGGAGGTCGAGT 59.639 66.667 0.00 0.00 0.00 4.18
8962 11006 2.055042 CAGGGAGGGAGGTCGAGTG 61.055 68.421 0.00 0.00 0.00 3.51
8963 11007 2.760385 GGGAGGGAGGTCGAGTGG 60.760 72.222 0.00 0.00 0.00 4.00
8964 11008 2.037527 GGAGGGAGGTCGAGTGGT 59.962 66.667 0.00 0.00 0.00 4.16
8965 11009 2.352032 GGAGGGAGGTCGAGTGGTG 61.352 68.421 0.00 0.00 0.00 4.17
8966 11010 1.304217 GAGGGAGGTCGAGTGGTGA 60.304 63.158 0.00 0.00 0.00 4.02
8967 11011 0.898789 GAGGGAGGTCGAGTGGTGAA 60.899 60.000 0.00 0.00 0.00 3.18
8968 11012 0.471211 AGGGAGGTCGAGTGGTGAAA 60.471 55.000 0.00 0.00 0.00 2.69
8969 11013 0.037232 GGGAGGTCGAGTGGTGAAAG 60.037 60.000 0.00 0.00 0.00 2.62
8970 11014 0.037232 GGAGGTCGAGTGGTGAAAGG 60.037 60.000 0.00 0.00 0.00 3.11
8971 11015 0.966920 GAGGTCGAGTGGTGAAAGGA 59.033 55.000 0.00 0.00 0.00 3.36
8972 11016 1.343465 GAGGTCGAGTGGTGAAAGGAA 59.657 52.381 0.00 0.00 0.00 3.36
8973 11017 1.344763 AGGTCGAGTGGTGAAAGGAAG 59.655 52.381 0.00 0.00 0.00 3.46
8974 11018 1.343465 GGTCGAGTGGTGAAAGGAAGA 59.657 52.381 0.00 0.00 0.00 2.87
8975 11019 2.610727 GGTCGAGTGGTGAAAGGAAGAG 60.611 54.545 0.00 0.00 0.00 2.85
8976 11020 1.618837 TCGAGTGGTGAAAGGAAGAGG 59.381 52.381 0.00 0.00 0.00 3.69
8977 11021 1.618837 CGAGTGGTGAAAGGAAGAGGA 59.381 52.381 0.00 0.00 0.00 3.71
8978 11022 2.037251 CGAGTGGTGAAAGGAAGAGGAA 59.963 50.000 0.00 0.00 0.00 3.36
8979 11023 3.669536 GAGTGGTGAAAGGAAGAGGAAG 58.330 50.000 0.00 0.00 0.00 3.46
8980 11024 2.373502 AGTGGTGAAAGGAAGAGGAAGG 59.626 50.000 0.00 0.00 0.00 3.46
8981 11025 2.106684 GTGGTGAAAGGAAGAGGAAGGT 59.893 50.000 0.00 0.00 0.00 3.50
8982 11026 3.326880 GTGGTGAAAGGAAGAGGAAGGTA 59.673 47.826 0.00 0.00 0.00 3.08
8983 11027 3.977999 TGGTGAAAGGAAGAGGAAGGTAA 59.022 43.478 0.00 0.00 0.00 2.85
8984 11028 4.041691 TGGTGAAAGGAAGAGGAAGGTAAG 59.958 45.833 0.00 0.00 0.00 2.34
8985 11029 4.565861 GGTGAAAGGAAGAGGAAGGTAAGG 60.566 50.000 0.00 0.00 0.00 2.69
8986 11030 3.009143 TGAAAGGAAGAGGAAGGTAAGGC 59.991 47.826 0.00 0.00 0.00 4.35
8987 11031 2.344093 AGGAAGAGGAAGGTAAGGCA 57.656 50.000 0.00 0.00 0.00 4.75
8988 11032 2.632537 AGGAAGAGGAAGGTAAGGCAA 58.367 47.619 0.00 0.00 0.00 4.52
8989 11033 2.986728 AGGAAGAGGAAGGTAAGGCAAA 59.013 45.455 0.00 0.00 0.00 3.68
8990 11034 3.397955 AGGAAGAGGAAGGTAAGGCAAAA 59.602 43.478 0.00 0.00 0.00 2.44
8991 11035 3.759086 GGAAGAGGAAGGTAAGGCAAAAG 59.241 47.826 0.00 0.00 0.00 2.27
8992 11036 4.506802 GGAAGAGGAAGGTAAGGCAAAAGA 60.507 45.833 0.00 0.00 0.00 2.52
8993 11037 4.724279 AGAGGAAGGTAAGGCAAAAGAA 57.276 40.909 0.00 0.00 0.00 2.52
8994 11038 5.061721 AGAGGAAGGTAAGGCAAAAGAAA 57.938 39.130 0.00 0.00 0.00 2.52
8995 11039 5.454966 AGAGGAAGGTAAGGCAAAAGAAAA 58.545 37.500 0.00 0.00 0.00 2.29
8996 11040 5.897250 AGAGGAAGGTAAGGCAAAAGAAAAA 59.103 36.000 0.00 0.00 0.00 1.94
9013 11057 3.908737 AAAAACTCGGAGGAGGACG 57.091 52.632 10.23 0.00 44.93 4.79
9014 11058 0.320508 AAAAACTCGGAGGAGGACGC 60.321 55.000 10.23 0.00 44.93 5.19
9015 11059 2.488087 AAAACTCGGAGGAGGACGCG 62.488 60.000 3.53 3.53 44.93 6.01
9021 11065 4.838486 GAGGAGGACGCGCGACAG 62.838 72.222 39.36 7.85 0.00 3.51
9030 11074 3.461982 GCGCGACAGACGACACTG 61.462 66.667 12.10 0.00 45.77 3.66
9031 11075 2.801162 CGCGACAGACGACACTGG 60.801 66.667 0.00 0.07 45.77 4.00
9032 11076 2.643272 GCGACAGACGACACTGGA 59.357 61.111 0.00 0.00 45.77 3.86
9033 11077 1.213013 GCGACAGACGACACTGGAT 59.787 57.895 0.00 0.00 45.77 3.41
9034 11078 0.798771 GCGACAGACGACACTGGATC 60.799 60.000 0.00 0.00 45.77 3.36
9035 11079 0.521450 CGACAGACGACACTGGATCG 60.521 60.000 11.80 1.86 45.77 3.69
9036 11080 0.803117 GACAGACGACACTGGATCGA 59.197 55.000 9.40 0.00 42.25 3.59
9037 11081 0.805614 ACAGACGACACTGGATCGAG 59.194 55.000 2.78 2.78 42.25 4.04
9038 11082 0.099613 CAGACGACACTGGATCGAGG 59.900 60.000 9.72 1.13 42.25 4.63
9039 11083 0.322636 AGACGACACTGGATCGAGGT 60.323 55.000 9.72 4.32 42.25 3.85
9040 11084 0.179161 GACGACACTGGATCGAGGTG 60.179 60.000 9.72 9.27 42.25 4.00
9041 11085 1.139734 CGACACTGGATCGAGGTGG 59.860 63.158 9.72 2.49 42.25 4.61
9042 11086 1.313091 CGACACTGGATCGAGGTGGA 61.313 60.000 9.72 0.00 42.25 4.02
9043 11087 1.115467 GACACTGGATCGAGGTGGAT 58.885 55.000 9.72 0.00 35.53 3.41
9044 11088 1.067821 GACACTGGATCGAGGTGGATC 59.932 57.143 9.72 0.00 41.67 3.36
9045 11089 0.031314 CACTGGATCGAGGTGGATCG 59.969 60.000 9.72 0.00 43.00 3.69
9051 11095 2.490217 CGAGGTGGATCGAACGCT 59.510 61.111 0.00 0.00 45.56 5.07
9052 11096 1.725665 CGAGGTGGATCGAACGCTA 59.274 57.895 0.00 0.00 45.56 4.26
9053 11097 0.317103 CGAGGTGGATCGAACGCTAG 60.317 60.000 0.00 0.00 45.56 3.42
9054 11098 0.595310 GAGGTGGATCGAACGCTAGC 60.595 60.000 4.06 4.06 0.00 3.42
9055 11099 1.038130 AGGTGGATCGAACGCTAGCT 61.038 55.000 13.93 0.00 0.00 3.32
9056 11100 0.595310 GGTGGATCGAACGCTAGCTC 60.595 60.000 13.93 3.34 0.00 4.09
9057 11101 0.595310 GTGGATCGAACGCTAGCTCC 60.595 60.000 13.93 12.08 0.00 4.70
9058 11102 1.035385 TGGATCGAACGCTAGCTCCA 61.035 55.000 15.18 15.18 0.00 3.86
9059 11103 0.315568 GGATCGAACGCTAGCTCCAT 59.684 55.000 13.93 0.00 0.00 3.41
9060 11104 1.413382 GATCGAACGCTAGCTCCATG 58.587 55.000 13.93 0.00 0.00 3.66
9061 11105 1.001268 GATCGAACGCTAGCTCCATGA 60.001 52.381 13.93 4.65 0.00 3.07
9062 11106 0.100682 TCGAACGCTAGCTCCATGAC 59.899 55.000 13.93 0.00 0.00 3.06
9063 11107 0.872021 CGAACGCTAGCTCCATGACC 60.872 60.000 13.93 0.00 0.00 4.02
9064 11108 0.872021 GAACGCTAGCTCCATGACCG 60.872 60.000 13.93 0.00 0.00 4.79
9065 11109 2.028190 CGCTAGCTCCATGACCGG 59.972 66.667 13.93 0.00 0.00 5.28
9066 11110 2.280457 GCTAGCTCCATGACCGGC 60.280 66.667 7.70 0.00 0.00 6.13
9067 11111 2.423446 CTAGCTCCATGACCGGCC 59.577 66.667 0.00 0.00 0.00 6.13
9068 11112 3.506059 CTAGCTCCATGACCGGCCG 62.506 68.421 21.04 21.04 0.00 6.13
9070 11114 4.467084 GCTCCATGACCGGCCGAA 62.467 66.667 30.73 12.71 0.00 4.30
9071 11115 2.511600 CTCCATGACCGGCCGAAC 60.512 66.667 30.73 20.27 0.00 3.95
9072 11116 4.444838 TCCATGACCGGCCGAACG 62.445 66.667 30.73 13.32 0.00 3.95
9073 11117 4.752879 CCATGACCGGCCGAACGT 62.753 66.667 30.73 17.20 0.00 3.99
9074 11118 2.740826 CATGACCGGCCGAACGTT 60.741 61.111 30.73 0.00 0.00 3.99
9075 11119 2.031465 ATGACCGGCCGAACGTTT 59.969 55.556 30.73 5.15 0.00 3.60
9076 11120 2.030958 ATGACCGGCCGAACGTTTC 61.031 57.895 30.73 12.86 0.00 2.78
9096 11140 3.787676 CGGCGCGCTGATGTGAAA 61.788 61.111 35.90 0.00 0.00 2.69
9097 11141 2.793946 GGCGCGCTGATGTGAAAT 59.206 55.556 32.29 0.00 0.00 2.17
9098 11142 1.584483 GGCGCGCTGATGTGAAATG 60.584 57.895 32.29 0.00 0.00 2.32
9099 11143 1.135315 GCGCGCTGATGTGAAATGT 59.865 52.632 26.67 0.00 0.00 2.71
9100 11144 0.454957 GCGCGCTGATGTGAAATGTT 60.455 50.000 26.67 0.00 0.00 2.71
9101 11145 1.967762 CGCGCTGATGTGAAATGTTT 58.032 45.000 5.56 0.00 0.00 2.83
9102 11146 2.318578 CGCGCTGATGTGAAATGTTTT 58.681 42.857 5.56 0.00 0.00 2.43
9103 11147 2.339400 CGCGCTGATGTGAAATGTTTTC 59.661 45.455 5.56 0.00 0.00 2.29
9104 11148 2.663119 GCGCTGATGTGAAATGTTTTCC 59.337 45.455 0.00 0.00 0.00 3.13
9105 11149 3.612479 GCGCTGATGTGAAATGTTTTCCT 60.612 43.478 0.00 0.00 0.00 3.36
9106 11150 4.549458 CGCTGATGTGAAATGTTTTCCTT 58.451 39.130 0.00 0.00 0.00 3.36
9107 11151 4.984161 CGCTGATGTGAAATGTTTTCCTTT 59.016 37.500 0.00 0.00 0.00 3.11
9108 11152 5.463061 CGCTGATGTGAAATGTTTTCCTTTT 59.537 36.000 0.00 0.00 0.00 2.27
9109 11153 6.018832 CGCTGATGTGAAATGTTTTCCTTTTT 60.019 34.615 0.00 0.00 0.00 1.94
9129 11173 3.648339 TTTTGAAGCAGACAATGGAGC 57.352 42.857 0.00 0.00 0.00 4.70
9130 11174 2.574006 TTGAAGCAGACAATGGAGCT 57.426 45.000 0.00 0.00 39.37 4.09
9131 11175 1.817357 TGAAGCAGACAATGGAGCTG 58.183 50.000 0.00 0.00 37.41 4.24
9136 11180 2.846039 CAGACAATGGAGCTGCAATC 57.154 50.000 13.45 10.58 0.00 2.67
9137 11181 2.089201 CAGACAATGGAGCTGCAATCA 58.911 47.619 13.45 0.00 0.00 2.57
9138 11182 2.089980 AGACAATGGAGCTGCAATCAC 58.910 47.619 13.45 4.91 0.00 3.06
9139 11183 1.133790 GACAATGGAGCTGCAATCACC 59.866 52.381 13.45 0.00 0.00 4.02
9140 11184 0.099968 CAATGGAGCTGCAATCACCG 59.900 55.000 13.45 0.00 0.00 4.94
9141 11185 0.322816 AATGGAGCTGCAATCACCGT 60.323 50.000 13.45 0.00 0.00 4.83
9142 11186 0.322816 ATGGAGCTGCAATCACCGTT 60.323 50.000 13.45 0.00 0.00 4.44
9143 11187 1.236616 TGGAGCTGCAATCACCGTTG 61.237 55.000 5.01 0.00 0.00 4.10
9144 11188 0.955428 GGAGCTGCAATCACCGTTGA 60.955 55.000 0.00 0.00 35.73 3.18
9145 11189 1.089920 GAGCTGCAATCACCGTTGAT 58.910 50.000 1.02 0.00 44.98 2.57
9146 11190 0.806868 AGCTGCAATCACCGTTGATG 59.193 50.000 1.02 0.00 42.00 3.07
9147 11191 0.179156 GCTGCAATCACCGTTGATGG 60.179 55.000 0.00 0.00 42.00 3.51
9150 11194 2.872408 CAATCACCGTTGATGGCCT 58.128 52.632 3.32 0.00 42.00 5.19
9151 11195 0.452987 CAATCACCGTTGATGGCCTG 59.547 55.000 3.32 0.00 42.00 4.85
9152 11196 0.680921 AATCACCGTTGATGGCCTGG 60.681 55.000 3.32 0.00 42.00 4.45
9153 11197 1.852157 ATCACCGTTGATGGCCTGGT 61.852 55.000 3.32 0.00 41.23 4.00
9154 11198 2.034066 ACCGTTGATGGCCTGGTG 59.966 61.111 3.32 0.00 0.00 4.17
9155 11199 2.751436 CCGTTGATGGCCTGGTGG 60.751 66.667 3.32 0.00 0.00 4.61
9175 11219 4.600517 GTCGTCGACGCAATTTCG 57.399 55.556 32.19 7.30 39.60 3.46
9176 11220 1.771044 GTCGTCGACGCAATTTCGT 59.229 52.632 32.19 1.91 46.38 3.85
9177 11221 0.513717 GTCGTCGACGCAATTTCGTG 60.514 55.000 32.19 3.14 43.42 4.35
9178 11222 1.853192 CGTCGACGCAATTTCGTGC 60.853 57.895 26.59 0.00 43.42 5.34
9179 11223 1.203065 GTCGACGCAATTTCGTGCA 59.797 52.632 8.12 0.00 45.19 4.57
9180 11224 0.383737 GTCGACGCAATTTCGTGCAA 60.384 50.000 8.12 0.00 45.19 4.08
9181 11225 0.383737 TCGACGCAATTTCGTGCAAC 60.384 50.000 8.12 0.00 45.19 4.17
9194 11238 3.253955 GCAACGAGCATCAACGGT 58.746 55.556 0.00 0.00 44.79 4.83
9197 11241 2.827604 AACGAGCATCAACGGTGAG 58.172 52.632 9.97 2.20 37.14 3.51
9198 11242 0.670546 AACGAGCATCAACGGTGAGG 60.671 55.000 11.49 11.49 37.14 3.86
9199 11243 1.811266 CGAGCATCAACGGTGAGGG 60.811 63.158 17.89 8.92 37.14 4.30
9200 11244 1.596934 GAGCATCAACGGTGAGGGA 59.403 57.895 17.89 0.00 37.14 4.20
9201 11245 0.741221 GAGCATCAACGGTGAGGGAC 60.741 60.000 17.89 0.45 37.14 4.46
9202 11246 2.100631 GCATCAACGGTGAGGGACG 61.101 63.158 17.89 0.00 37.14 4.79
9203 11247 1.447838 CATCAACGGTGAGGGACGG 60.448 63.158 9.97 0.00 37.14 4.79
9204 11248 3.310860 ATCAACGGTGAGGGACGGC 62.311 63.158 9.97 0.00 37.14 5.68
9215 11259 4.509737 GGACGGCGGTGGAGCTAC 62.510 72.222 13.24 0.00 37.29 3.58
9216 11260 4.849329 GACGGCGGTGGAGCTACG 62.849 72.222 13.24 0.00 37.29 3.51
9218 11262 4.849329 CGGCGGTGGAGCTACGAC 62.849 72.222 0.00 0.00 37.29 4.34
9219 11263 4.509737 GGCGGTGGAGCTACGACC 62.510 72.222 7.33 7.33 42.68 4.79
9222 11266 3.834799 GGTGGAGCTACGACCGGG 61.835 72.222 6.32 0.00 37.61 5.73
9223 11267 3.834799 GTGGAGCTACGACCGGGG 61.835 72.222 6.32 0.00 0.00 5.73
9225 11269 4.828296 GGAGCTACGACCGGGGGA 62.828 72.222 6.32 0.00 0.00 4.81
9226 11270 3.217743 GAGCTACGACCGGGGGAG 61.218 72.222 6.32 4.20 0.00 4.30
9229 11273 2.194056 CTACGACCGGGGGAGCTA 59.806 66.667 6.32 0.00 0.00 3.32
9230 11274 1.897615 CTACGACCGGGGGAGCTAG 60.898 68.421 6.32 0.00 0.00 3.42
9231 11275 2.335092 CTACGACCGGGGGAGCTAGA 62.335 65.000 6.32 0.00 0.00 2.43
9232 11276 1.925285 TACGACCGGGGGAGCTAGAA 61.925 60.000 6.32 0.00 0.00 2.10
9233 11277 2.491022 CGACCGGGGGAGCTAGAAG 61.491 68.421 6.32 0.00 0.00 2.85
9234 11278 2.764547 ACCGGGGGAGCTAGAAGC 60.765 66.667 6.32 0.00 42.84 3.86
9277 11321 2.527100 GCAGATGCAGTTCTTTCATGC 58.473 47.619 0.00 0.00 41.59 4.06
9278 11322 2.782163 CAGATGCAGTTCTTTCATGCG 58.218 47.619 0.00 0.00 42.92 4.73
9279 11323 2.161012 CAGATGCAGTTCTTTCATGCGT 59.839 45.455 0.00 0.00 42.92 5.24
9280 11324 2.816087 AGATGCAGTTCTTTCATGCGTT 59.184 40.909 0.00 0.00 42.92 4.84
9281 11325 2.404265 TGCAGTTCTTTCATGCGTTG 57.596 45.000 0.00 0.00 42.92 4.10
9282 11326 1.055338 GCAGTTCTTTCATGCGTTGC 58.945 50.000 0.00 0.00 0.00 4.17
9283 11327 1.321016 CAGTTCTTTCATGCGTTGCG 58.679 50.000 0.00 0.00 0.00 4.85
9284 11328 1.069973 CAGTTCTTTCATGCGTTGCGA 60.070 47.619 0.00 0.00 0.00 5.10
9285 11329 1.069906 AGTTCTTTCATGCGTTGCGAC 60.070 47.619 0.00 0.00 0.00 5.19
9295 11339 3.374330 GTTGCGACGACGATGAGG 58.626 61.111 12.29 0.00 42.66 3.86
9296 11340 1.154093 GTTGCGACGACGATGAGGA 60.154 57.895 12.29 0.00 42.66 3.71
9297 11341 1.154093 TTGCGACGACGATGAGGAC 60.154 57.895 12.29 0.00 42.66 3.85
9298 11342 2.648102 GCGACGACGATGAGGACG 60.648 66.667 12.29 0.00 42.66 4.79
9299 11343 3.087176 CGACGACGATGAGGACGA 58.913 61.111 0.00 0.00 42.66 4.20
9300 11344 1.296722 CGACGACGATGAGGACGAC 60.297 63.158 0.00 0.00 42.66 4.34
9301 11345 1.062206 GACGACGATGAGGACGACC 59.938 63.158 0.00 0.00 34.70 4.79
9302 11346 2.022902 CGACGATGAGGACGACCG 59.977 66.667 0.00 0.00 41.83 4.79
9303 11347 2.408022 GACGATGAGGACGACCGG 59.592 66.667 0.00 0.00 41.83 5.28
9304 11348 3.753070 GACGATGAGGACGACCGGC 62.753 68.421 0.00 0.00 41.83 6.13
9306 11350 3.515286 GATGAGGACGACCGGCGA 61.515 66.667 22.10 2.72 44.57 5.54
9307 11351 3.471244 GATGAGGACGACCGGCGAG 62.471 68.421 22.10 7.51 44.57 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 1.112113 GTTCCCTATGCCTCGTCTCA 58.888 55.000 0.00 0.00 0.00 3.27
212 217 9.683870 ACAAACCCAATCAATATTTTGCAATAT 57.316 25.926 0.00 3.39 37.20 1.28
270 275 5.279306 CCATTGATTTTCATATGCTCCTGGG 60.279 44.000 0.00 0.00 0.00 4.45
290 295 1.165782 TCCCTCCCACCCTTCCATT 59.834 57.895 0.00 0.00 0.00 3.16
468 475 1.275010 TGCATCAAGTCGTCCTTAGCA 59.725 47.619 0.00 0.00 34.34 3.49
497 504 3.064545 CCAAAGAAAGCTAGCTTGATCCG 59.935 47.826 29.94 17.75 36.26 4.18
587 595 1.003580 GCATCTTTCACCACCCTCTCA 59.996 52.381 0.00 0.00 0.00 3.27
600 608 8.496707 AAGAAACAAAACAAATCAGCATCTTT 57.503 26.923 0.00 0.00 0.00 2.52
699 707 9.491675 TGGTTTTCTATTTCTATTCGTACAACA 57.508 29.630 0.00 0.00 0.00 3.33
765 1469 7.858382 CCACGAAATACAAAATGTGAGTAAACA 59.142 33.333 0.00 0.00 0.00 2.83
820 1524 1.896220 AATGCTCCTGCGTTCTCAAA 58.104 45.000 0.00 0.00 44.28 2.69
821 1525 3.631453 AATGCTCCTGCGTTCTCAA 57.369 47.368 0.00 0.00 44.28 3.02
866 1600 3.054948 CCCAACGGACCAACCTAAGATTA 60.055 47.826 0.00 0.00 36.31 1.75
867 1601 2.290705 CCCAACGGACCAACCTAAGATT 60.291 50.000 0.00 0.00 36.31 2.40
868 1602 1.280998 CCCAACGGACCAACCTAAGAT 59.719 52.381 0.00 0.00 36.31 2.40
870 1604 0.958876 GCCCAACGGACCAACCTAAG 60.959 60.000 0.00 0.00 36.31 2.18
953 1740 1.470098 CGGGTGGATGCAAGAAGAAAG 59.530 52.381 0.00 0.00 0.00 2.62
1127 1916 2.034221 GGGCGGCCTTGTCTTCTT 59.966 61.111 22.87 0.00 0.00 2.52
1432 2244 4.790962 ATGGCCGTGGAGCAGCTG 62.791 66.667 10.11 10.11 0.00 4.24
1470 2282 1.875514 TGATAATAGTCCGTCCGTCCG 59.124 52.381 0.00 0.00 0.00 4.79
1471 2283 3.996150 TTGATAATAGTCCGTCCGTCC 57.004 47.619 0.00 0.00 0.00 4.79
1473 2285 4.628074 CCAATTGATAATAGTCCGTCCGT 58.372 43.478 7.12 0.00 0.00 4.69
1476 2288 6.430451 CAAAGCCAATTGATAATAGTCCGTC 58.570 40.000 7.12 0.00 31.84 4.79
1477 2289 5.221048 GCAAAGCCAATTGATAATAGTCCGT 60.221 40.000 7.12 0.00 31.84 4.69
1479 2291 6.183360 ACAGCAAAGCCAATTGATAATAGTCC 60.183 38.462 7.12 0.00 31.84 3.85
1497 2315 1.438399 CAACCTGCAGCACAGCAAA 59.562 52.632 8.66 0.00 45.78 3.68
1501 2319 4.695231 GCGCAACCTGCAGCACAG 62.695 66.667 8.66 0.00 45.36 3.66
1706 2531 1.874739 GCACGTAGTAAGTTGGGCACA 60.875 52.381 0.00 0.00 41.61 4.57
1708 2533 0.682852 AGCACGTAGTAAGTTGGGCA 59.317 50.000 0.00 0.00 41.61 5.36
1722 2547 1.056103 CTGAAGTTCTCACGAGCACG 58.944 55.000 0.76 0.76 45.75 5.34
1915 2884 9.866798 TTTCTTATATCAGCTGAGTATATGCAG 57.133 33.333 22.96 14.10 35.28 4.41
1919 2888 9.265862 AGGCTTTCTTATATCAGCTGAGTATAT 57.734 33.333 22.96 16.64 32.52 0.86
1920 2889 8.657387 AGGCTTTCTTATATCAGCTGAGTATA 57.343 34.615 22.96 18.51 32.52 1.47
1936 2905 3.092301 GGATACTTGGCAAGGCTTTCTT 58.908 45.455 29.26 10.50 35.79 2.52
2024 2993 3.773860 AACATTTTGCAAGACGTGTGA 57.226 38.095 0.00 0.00 0.00 3.58
2067 3036 2.105006 ACCTAGCAGCAGACAATGTG 57.895 50.000 0.00 0.00 0.00 3.21
2078 3047 1.482593 CAGACCCACCTAACCTAGCAG 59.517 57.143 0.00 0.00 0.00 4.24
2350 3333 9.204570 GTGACGATAGCAAATAATAACCACTAT 57.795 33.333 0.00 0.00 42.67 2.12
2609 3603 8.776470 ACATAATACTAAGAGAAGTCTACTCGC 58.224 37.037 0.00 0.00 39.12 5.03
2825 3819 1.691434 TCCCATTTTGAGGGCACAAAC 59.309 47.619 8.22 0.00 46.36 2.93
3074 4189 1.303317 GAACCCGTGACCTGCCAAT 60.303 57.895 0.00 0.00 0.00 3.16
3430 4755 9.614792 AATTAAGGCTATTTGACCAGTACTAAG 57.385 33.333 0.00 0.00 0.00 2.18
3788 5123 4.606457 GCTTTTCGAGTAAGCATGACAT 57.394 40.909 22.17 0.00 45.64 3.06
3802 5137 1.734465 AGATTGCCGAGAAGCTTTTCG 59.266 47.619 27.41 27.41 36.62 3.46
4074 5415 6.122850 TCAGACCATGCATAAGAAAAATCG 57.877 37.500 0.00 0.00 0.00 3.34
4562 5999 0.036765 ACACGTGTGGGCGTTATCAT 60.037 50.000 22.71 0.00 43.83 2.45
4581 6018 2.976840 GCGGAATTGCTTCGTGCCA 61.977 57.895 0.00 0.00 42.00 4.92
4582 6019 2.202479 GCGGAATTGCTTCGTGCC 60.202 61.111 0.00 0.00 42.00 5.01
4583 6020 2.202479 GGCGGAATTGCTTCGTGC 60.202 61.111 0.00 0.00 43.25 5.34
4585 6022 2.033448 TGGGCGGAATTGCTTCGT 59.967 55.556 0.00 0.00 34.52 3.85
4586 6023 2.331893 TGTGGGCGGAATTGCTTCG 61.332 57.895 0.00 0.00 34.52 3.79
4587 6024 1.212751 GTGTGGGCGGAATTGCTTC 59.787 57.895 0.00 0.00 34.52 3.86
4588 6025 2.625823 CGTGTGGGCGGAATTGCTT 61.626 57.895 0.00 0.00 34.52 3.91
4715 6155 1.821216 ACACTAAAGTTGCCATCCGG 58.179 50.000 0.00 0.00 0.00 5.14
4785 6226 9.813080 GAACATTATCATAGAAAATAAGGACGC 57.187 33.333 0.00 0.00 0.00 5.19
5009 6663 2.207229 AAAGGGGCCTTTTCACGGC 61.207 57.895 7.97 0.00 42.93 5.68
5426 7093 5.904362 AGATAGGTGGAAGAATTGTTTGC 57.096 39.130 0.00 0.00 0.00 3.68
6014 7895 9.106070 GATTCACGTACAAAGGAATTAAGGTAT 57.894 33.333 0.00 0.00 30.60 2.73
6377 8277 3.810310 AAAAGGCGATCCAACAAACAA 57.190 38.095 0.00 0.00 33.74 2.83
6562 8464 8.625786 TGGCAACGTATCTATAGTTCTATACA 57.374 34.615 0.00 0.00 42.51 2.29
6581 8501 4.684242 GCCTAAAACAGTAACATTGGCAAC 59.316 41.667 0.00 0.00 37.91 4.17
6608 8528 8.911247 AGAAAAGCTAAAATAATAAGCAACCG 57.089 30.769 0.00 0.00 38.75 4.44
6739 8660 4.081862 CCACATCAGATGGAAAAGCATGTT 60.082 41.667 15.13 0.00 39.87 2.71
6751 8672 2.945080 ATAGGTGCCCACATCAGATG 57.055 50.000 9.03 9.03 0.00 2.90
6981 8913 7.859325 TTTAAACAGAGCAGTAACTGAAACT 57.141 32.000 0.00 0.00 37.54 2.66
7037 8994 9.893975 AACAGGATAAGTATAACTAGTGGGTAT 57.106 33.333 0.00 0.00 0.00 2.73
7100 9057 2.257207 TCCTTCGAGTGGTTCCTGAAT 58.743 47.619 6.46 0.00 0.00 2.57
7373 9347 6.900194 AGTTTAACCACTGCCATATATCTGT 58.100 36.000 0.00 0.00 0.00 3.41
7408 9382 6.088085 GCATTCTTCCAGTGAAAAACATAACG 59.912 38.462 0.00 0.00 0.00 3.18
7450 9427 3.565307 ACTCCAGAATGCAAGGTTCAAA 58.435 40.909 0.00 0.00 31.97 2.69
7468 9445 3.253677 ACGTCATATGGATTCGAGGACTC 59.746 47.826 2.13 0.00 0.00 3.36
7469 9446 3.004839 CACGTCATATGGATTCGAGGACT 59.995 47.826 2.13 0.00 0.00 3.85
7470 9447 3.004419 TCACGTCATATGGATTCGAGGAC 59.996 47.826 2.13 0.00 0.00 3.85
7472 9449 3.004839 ACTCACGTCATATGGATTCGAGG 59.995 47.826 2.13 2.92 0.00 4.63
7473 9450 4.230314 ACTCACGTCATATGGATTCGAG 57.770 45.455 2.13 5.83 0.00 4.04
7475 9452 4.803613 TCAAACTCACGTCATATGGATTCG 59.196 41.667 2.13 6.02 0.00 3.34
7488 9472 3.885484 ATGCTTCAGTTCAAACTCACG 57.115 42.857 0.00 0.00 37.08 4.35
7490 9474 5.764686 ACATGTATGCTTCAGTTCAAACTCA 59.235 36.000 0.00 0.00 37.08 3.41
7531 9515 8.503458 AAGAAGTGATCAAATAGGAGAACATG 57.497 34.615 0.00 0.00 0.00 3.21
7715 9711 2.508526 AGAGTGCTTGGTTCAATGGAC 58.491 47.619 0.00 0.00 0.00 4.02
7716 9712 2.957402 AGAGTGCTTGGTTCAATGGA 57.043 45.000 0.00 0.00 0.00 3.41
7791 9791 1.535462 CCTTCTGGGCGTACAAAGTTG 59.465 52.381 0.00 0.00 0.00 3.16
7826 9826 6.332630 AGCTTCAAGCAACGCAAAATATAAT 58.667 32.000 13.10 0.00 45.56 1.28
7902 9903 2.810439 TTTGCATAACCTTGTGTGGC 57.190 45.000 0.00 0.00 0.00 5.01
8043 10051 0.108662 AGCATCGTCATCAGTCGCAA 60.109 50.000 0.00 0.00 0.00 4.85
8092 10101 6.863275 TCATCATGAAAAGCTACTCGTAGAA 58.137 36.000 0.00 0.00 35.21 2.10
8121 10132 2.028385 ACTCTTGGCGAAACGGTAGAAT 60.028 45.455 0.00 0.00 0.00 2.40
8126 10137 1.782028 GCAACTCTTGGCGAAACGGT 61.782 55.000 0.00 0.00 0.00 4.83
8267 10280 3.057315 CCTGTTGTCATTACAAGCCAAGG 60.057 47.826 0.00 0.00 46.06 3.61
8296 10312 6.183360 CCAACAAAAGGCTCAAACTTCTCTTA 60.183 38.462 0.00 0.00 0.00 2.10
8312 10328 8.816640 ACAAGAATAAATAGCACCAACAAAAG 57.183 30.769 0.00 0.00 0.00 2.27
8313 10329 9.906660 CTACAAGAATAAATAGCACCAACAAAA 57.093 29.630 0.00 0.00 0.00 2.44
8315 10331 8.630054 ACTACAAGAATAAATAGCACCAACAA 57.370 30.769 0.00 0.00 0.00 2.83
8316 10332 8.630054 AACTACAAGAATAAATAGCACCAACA 57.370 30.769 0.00 0.00 0.00 3.33
8317 10333 9.983804 GTAACTACAAGAATAAATAGCACCAAC 57.016 33.333 0.00 0.00 0.00 3.77
8404 10446 4.063529 CCAAAGAAGCTGGCGACA 57.936 55.556 0.00 0.00 39.59 4.35
8425 10467 0.392060 CTACAGCATGGCTCAGCACA 60.392 55.000 0.00 0.00 43.62 4.57
8426 10468 0.392193 ACTACAGCATGGCTCAGCAC 60.392 55.000 0.00 0.00 43.62 4.40
8440 10482 1.502690 ACAGGGTGGACAACACTACA 58.497 50.000 0.00 0.00 42.20 2.74
8463 10505 2.731691 AAGAGCGCCTTCGAAGCCAA 62.732 55.000 19.99 0.00 38.10 4.52
8570 10612 5.224888 CAAACATAACTCTGCTGCAATTGT 58.775 37.500 7.40 0.00 0.00 2.71
8583 10625 3.216147 GCGATTGCACCAAACATAACT 57.784 42.857 0.00 0.00 42.15 2.24
8620 10664 1.281867 AGAGGCCATCAAAATCGTCCA 59.718 47.619 5.01 0.00 0.00 4.02
8644 10688 7.986320 CCCCTGCAAATCAAAATCATAATTACA 59.014 33.333 0.00 0.00 0.00 2.41
8645 10689 7.986889 ACCCCTGCAAATCAAAATCATAATTAC 59.013 33.333 0.00 0.00 0.00 1.89
8647 10691 6.824704 CACCCCTGCAAATCAAAATCATAATT 59.175 34.615 0.00 0.00 0.00 1.40
8651 10695 3.583966 ACACCCCTGCAAATCAAAATCAT 59.416 39.130 0.00 0.00 0.00 2.45
8683 10727 3.329889 TCATCCCAACCTGCGCCT 61.330 61.111 4.18 0.00 0.00 5.52
8686 10730 3.499737 GCGTCATCCCAACCTGCG 61.500 66.667 0.00 0.00 0.00 5.18
8694 10738 1.714899 CCACAATTCGGCGTCATCCC 61.715 60.000 6.85 0.00 0.00 3.85
8701 10745 0.462937 TGGGTATCCACAATTCGGCG 60.463 55.000 0.00 0.00 38.32 6.46
8714 10758 6.368779 TGCTTAAGTTGAGTTACTGGGTAT 57.631 37.500 4.02 0.00 0.00 2.73
8720 10764 7.016361 CAACACTTGCTTAAGTTGAGTTACT 57.984 36.000 4.02 0.00 42.87 2.24
8736 10780 2.593775 CACACGAGTTTTGCAACACTTG 59.406 45.455 25.04 25.04 35.05 3.16
8737 10781 2.486203 TCACACGAGTTTTGCAACACTT 59.514 40.909 18.76 2.00 35.05 3.16
8738 10782 2.080693 TCACACGAGTTTTGCAACACT 58.919 42.857 17.87 17.87 35.05 3.55
8739 10783 2.535934 TCACACGAGTTTTGCAACAC 57.464 45.000 7.67 7.67 35.05 3.32
8740 10784 4.884458 TTATCACACGAGTTTTGCAACA 57.116 36.364 0.00 0.00 35.05 3.33
8741 10785 9.158364 CATATATTATCACACGAGTTTTGCAAC 57.842 33.333 0.00 0.00 0.00 4.17
8742 10786 8.341903 CCATATATTATCACACGAGTTTTGCAA 58.658 33.333 0.00 0.00 0.00 4.08
8743 10787 7.497579 ACCATATATTATCACACGAGTTTTGCA 59.502 33.333 0.00 0.00 0.00 4.08
8744 10788 7.861630 ACCATATATTATCACACGAGTTTTGC 58.138 34.615 0.00 0.00 0.00 3.68
8766 10810 9.653287 CTGTTTAGATTGTGACTATCTTTACCA 57.347 33.333 14.27 6.55 34.35 3.25
8767 10811 8.604890 GCTGTTTAGATTGTGACTATCTTTACC 58.395 37.037 14.27 2.80 34.35 2.85
8768 10812 8.604890 GGCTGTTTAGATTGTGACTATCTTTAC 58.395 37.037 14.27 12.51 34.35 2.01
8769 10813 7.769044 GGGCTGTTTAGATTGTGACTATCTTTA 59.231 37.037 14.27 1.90 34.35 1.85
8770 10814 6.599638 GGGCTGTTTAGATTGTGACTATCTTT 59.400 38.462 14.27 0.00 34.35 2.52
8771 10815 6.116126 GGGCTGTTTAGATTGTGACTATCTT 58.884 40.000 14.27 0.59 34.35 2.40
8772 10816 5.396884 GGGGCTGTTTAGATTGTGACTATCT 60.397 44.000 13.62 13.62 36.39 1.98
8773 10817 4.816925 GGGGCTGTTTAGATTGTGACTATC 59.183 45.833 0.00 0.00 0.00 2.08
8774 10818 4.475016 AGGGGCTGTTTAGATTGTGACTAT 59.525 41.667 0.00 0.00 0.00 2.12
8775 10819 3.844211 AGGGGCTGTTTAGATTGTGACTA 59.156 43.478 0.00 0.00 0.00 2.59
8776 10820 2.644798 AGGGGCTGTTTAGATTGTGACT 59.355 45.455 0.00 0.00 0.00 3.41
8777 10821 3.073274 AGGGGCTGTTTAGATTGTGAC 57.927 47.619 0.00 0.00 0.00 3.67
8778 10822 3.806949 AAGGGGCTGTTTAGATTGTGA 57.193 42.857 0.00 0.00 0.00 3.58
8779 10823 6.152661 TCAATTAAGGGGCTGTTTAGATTGTG 59.847 38.462 0.00 0.00 0.00 3.33
8780 10824 6.252995 TCAATTAAGGGGCTGTTTAGATTGT 58.747 36.000 0.00 0.00 0.00 2.71
8781 10825 6.773976 TCAATTAAGGGGCTGTTTAGATTG 57.226 37.500 0.00 0.00 0.00 2.67
8782 10826 6.954102 ACTTCAATTAAGGGGCTGTTTAGATT 59.046 34.615 0.00 0.00 39.73 2.40
8783 10827 6.494059 ACTTCAATTAAGGGGCTGTTTAGAT 58.506 36.000 0.00 0.00 39.73 1.98
8784 10828 5.887754 ACTTCAATTAAGGGGCTGTTTAGA 58.112 37.500 0.00 0.00 39.73 2.10
8785 10829 6.389906 CAACTTCAATTAAGGGGCTGTTTAG 58.610 40.000 0.00 0.00 39.73 1.85
8786 10830 5.245075 CCAACTTCAATTAAGGGGCTGTTTA 59.755 40.000 0.00 0.00 39.73 2.01
8787 10831 4.040339 CCAACTTCAATTAAGGGGCTGTTT 59.960 41.667 0.00 0.00 39.73 2.83
8788 10832 3.578282 CCAACTTCAATTAAGGGGCTGTT 59.422 43.478 0.00 0.00 39.73 3.16
8789 10833 3.165071 CCAACTTCAATTAAGGGGCTGT 58.835 45.455 0.00 0.00 39.73 4.40
8790 10834 2.497273 CCCAACTTCAATTAAGGGGCTG 59.503 50.000 0.00 0.00 39.73 4.85
8791 10835 2.820178 CCCAACTTCAATTAAGGGGCT 58.180 47.619 0.00 0.00 39.73 5.19
8794 10838 3.192633 CGTTCCCCAACTTCAATTAAGGG 59.807 47.826 0.00 0.00 39.73 3.95
8795 10839 3.366985 GCGTTCCCCAACTTCAATTAAGG 60.367 47.826 0.00 0.00 39.73 2.69
8796 10840 3.366985 GGCGTTCCCCAACTTCAATTAAG 60.367 47.826 0.00 0.00 41.33 1.85
8797 10841 2.559231 GGCGTTCCCCAACTTCAATTAA 59.441 45.455 0.00 0.00 0.00 1.40
8798 10842 2.164338 GGCGTTCCCCAACTTCAATTA 58.836 47.619 0.00 0.00 0.00 1.40
8799 10843 0.966179 GGCGTTCCCCAACTTCAATT 59.034 50.000 0.00 0.00 0.00 2.32
8800 10844 1.241315 CGGCGTTCCCCAACTTCAAT 61.241 55.000 0.00 0.00 0.00 2.57
8801 10845 1.894756 CGGCGTTCCCCAACTTCAA 60.895 57.895 0.00 0.00 0.00 2.69
8802 10846 2.281208 CGGCGTTCCCCAACTTCA 60.281 61.111 0.00 0.00 0.00 3.02
8803 10847 1.598685 TTCGGCGTTCCCCAACTTC 60.599 57.895 6.85 0.00 0.00 3.01
8804 10848 1.895231 GTTCGGCGTTCCCCAACTT 60.895 57.895 6.85 0.00 0.00 2.66
8805 10849 2.281276 GTTCGGCGTTCCCCAACT 60.281 61.111 6.85 0.00 0.00 3.16
8806 10850 1.969589 ATGTTCGGCGTTCCCCAAC 60.970 57.895 6.85 3.11 0.00 3.77
8807 10851 1.969064 CATGTTCGGCGTTCCCCAA 60.969 57.895 6.85 0.00 0.00 4.12
8808 10852 2.359354 CATGTTCGGCGTTCCCCA 60.359 61.111 6.85 0.00 0.00 4.96
8809 10853 3.810896 GCATGTTCGGCGTTCCCC 61.811 66.667 6.85 0.00 0.00 4.81
8810 10854 2.622011 TTGCATGTTCGGCGTTCCC 61.622 57.895 6.85 0.00 0.00 3.97
8811 10855 1.442017 GTTGCATGTTCGGCGTTCC 60.442 57.895 6.85 0.00 0.00 3.62
8812 10856 0.725784 CTGTTGCATGTTCGGCGTTC 60.726 55.000 6.85 1.67 0.00 3.95
8813 10857 1.282570 CTGTTGCATGTTCGGCGTT 59.717 52.632 6.85 0.00 0.00 4.84
8814 10858 2.616330 CCTGTTGCATGTTCGGCGT 61.616 57.895 6.85 0.00 0.00 5.68
8815 10859 2.176546 CCTGTTGCATGTTCGGCG 59.823 61.111 0.00 0.00 0.00 6.46
8816 10860 1.081242 CACCTGTTGCATGTTCGGC 60.081 57.895 0.00 0.00 0.00 5.54
8817 10861 1.580942 CCACCTGTTGCATGTTCGG 59.419 57.895 0.00 0.00 0.00 4.30
8818 10862 1.580942 CCCACCTGTTGCATGTTCG 59.419 57.895 0.00 0.00 0.00 3.95
8819 10863 1.181098 AGCCCACCTGTTGCATGTTC 61.181 55.000 0.00 0.00 0.00 3.18
8820 10864 0.760189 AAGCCCACCTGTTGCATGTT 60.760 50.000 0.00 0.00 0.00 2.71
8821 10865 1.152483 AAGCCCACCTGTTGCATGT 60.152 52.632 0.00 0.00 0.00 3.21
8822 10866 1.180456 TCAAGCCCACCTGTTGCATG 61.180 55.000 0.00 0.00 0.00 4.06
8823 10867 0.469705 TTCAAGCCCACCTGTTGCAT 60.470 50.000 0.00 0.00 0.00 3.96
8824 10868 0.685785 TTTCAAGCCCACCTGTTGCA 60.686 50.000 0.00 0.00 0.00 4.08
8825 10869 0.463620 TTTTCAAGCCCACCTGTTGC 59.536 50.000 0.00 0.00 0.00 4.17
8826 10870 2.977772 TTTTTCAAGCCCACCTGTTG 57.022 45.000 0.00 0.00 0.00 3.33
8827 10871 3.070015 CAGATTTTTCAAGCCCACCTGTT 59.930 43.478 0.00 0.00 0.00 3.16
8828 10872 2.629617 CAGATTTTTCAAGCCCACCTGT 59.370 45.455 0.00 0.00 0.00 4.00
8829 10873 2.629617 ACAGATTTTTCAAGCCCACCTG 59.370 45.455 0.00 0.00 0.00 4.00
8830 10874 2.962859 ACAGATTTTTCAAGCCCACCT 58.037 42.857 0.00 0.00 0.00 4.00
8831 10875 3.554960 GGAACAGATTTTTCAAGCCCACC 60.555 47.826 0.00 0.00 0.00 4.61
8832 10876 3.321968 AGGAACAGATTTTTCAAGCCCAC 59.678 43.478 0.00 0.00 0.00 4.61
8833 10877 3.321682 CAGGAACAGATTTTTCAAGCCCA 59.678 43.478 0.00 0.00 0.00 5.36
8834 10878 3.306294 CCAGGAACAGATTTTTCAAGCCC 60.306 47.826 0.00 0.00 0.00 5.19
8835 10879 3.321968 ACCAGGAACAGATTTTTCAAGCC 59.678 43.478 0.00 0.00 0.00 4.35
8836 10880 4.301628 CACCAGGAACAGATTTTTCAAGC 58.698 43.478 0.00 0.00 0.00 4.01
8837 10881 4.584325 TCCACCAGGAACAGATTTTTCAAG 59.416 41.667 0.00 0.00 42.23 3.02
8838 10882 4.541705 TCCACCAGGAACAGATTTTTCAA 58.458 39.130 0.00 0.00 42.23 2.69
8839 10883 4.177537 TCCACCAGGAACAGATTTTTCA 57.822 40.909 0.00 0.00 42.23 2.69
8856 10900 4.803426 CTCTGGCGAGGCGTCCAC 62.803 72.222 0.00 0.00 33.51 4.02
8858 10902 3.708220 CTTCTCTGGCGAGGCGTCC 62.708 68.421 0.00 0.00 37.86 4.79
8859 10903 2.202676 CTTCTCTGGCGAGGCGTC 60.203 66.667 0.00 0.00 37.86 5.19
8860 10904 4.443266 GCTTCTCTGGCGAGGCGT 62.443 66.667 0.00 0.00 37.86 5.68
8861 10905 4.140599 AGCTTCTCTGGCGAGGCG 62.141 66.667 0.00 0.00 37.86 5.52
8862 10906 2.511145 CAGCTTCTCTGGCGAGGC 60.511 66.667 0.00 0.00 39.15 4.70
8863 10907 2.511145 GCAGCTTCTCTGGCGAGG 60.511 66.667 0.00 0.00 43.06 4.63
8864 10908 2.884685 CGCAGCTTCTCTGGCGAG 60.885 66.667 8.03 0.00 43.06 5.03
8865 10909 4.441695 CCGCAGCTTCTCTGGCGA 62.442 66.667 14.64 0.00 43.06 5.54
8866 10910 4.749310 ACCGCAGCTTCTCTGGCG 62.749 66.667 6.87 6.87 43.06 5.69
8867 10911 3.123620 CACCGCAGCTTCTCTGGC 61.124 66.667 0.00 0.00 43.06 4.85
8868 10912 3.123620 GCACCGCAGCTTCTCTGG 61.124 66.667 0.00 0.00 43.06 3.86
8869 10913 2.047465 AGCACCGCAGCTTCTCTG 60.047 61.111 0.00 0.00 43.70 3.35
8870 10914 2.264166 GAGCACCGCAGCTTCTCT 59.736 61.111 1.28 0.00 46.75 3.10
8871 10915 2.047844 TGAGCACCGCAGCTTCTC 60.048 61.111 1.28 0.00 46.75 2.87
8872 10916 2.358003 GTGAGCACCGCAGCTTCT 60.358 61.111 1.28 0.00 46.75 2.85
8873 10917 3.426568 GGTGAGCACCGCAGCTTC 61.427 66.667 3.57 0.00 46.75 3.86
8899 10943 4.742201 CACCCCGCGTGACCTCAG 62.742 72.222 4.92 0.00 46.20 3.35
8917 10961 1.308746 TTTGATCCTCCCCTCCCCC 60.309 63.158 0.00 0.00 0.00 5.40
8918 10962 0.919289 TGTTTGATCCTCCCCTCCCC 60.919 60.000 0.00 0.00 0.00 4.81
8919 10963 0.999712 TTGTTTGATCCTCCCCTCCC 59.000 55.000 0.00 0.00 0.00 4.30
8920 10964 1.064389 CCTTGTTTGATCCTCCCCTCC 60.064 57.143 0.00 0.00 0.00 4.30
8921 10965 1.916181 TCCTTGTTTGATCCTCCCCTC 59.084 52.381 0.00 0.00 0.00 4.30
8922 10966 1.918957 CTCCTTGTTTGATCCTCCCCT 59.081 52.381 0.00 0.00 0.00 4.79
8923 10967 1.683319 GCTCCTTGTTTGATCCTCCCC 60.683 57.143 0.00 0.00 0.00 4.81
8924 10968 1.683319 GGCTCCTTGTTTGATCCTCCC 60.683 57.143 0.00 0.00 0.00 4.30
8925 10969 1.004745 TGGCTCCTTGTTTGATCCTCC 59.995 52.381 0.00 0.00 0.00 4.30
8926 10970 2.363683 CTGGCTCCTTGTTTGATCCTC 58.636 52.381 0.00 0.00 0.00 3.71
8927 10971 1.005215 CCTGGCTCCTTGTTTGATCCT 59.995 52.381 0.00 0.00 0.00 3.24
8928 10972 1.467920 CCTGGCTCCTTGTTTGATCC 58.532 55.000 0.00 0.00 0.00 3.36
8929 10973 1.004745 TCCCTGGCTCCTTGTTTGATC 59.995 52.381 0.00 0.00 0.00 2.92
8930 10974 1.005215 CTCCCTGGCTCCTTGTTTGAT 59.995 52.381 0.00 0.00 0.00 2.57
8931 10975 0.401738 CTCCCTGGCTCCTTGTTTGA 59.598 55.000 0.00 0.00 0.00 2.69
8932 10976 0.610232 CCTCCCTGGCTCCTTGTTTG 60.610 60.000 0.00 0.00 0.00 2.93
8933 10977 1.770324 CCTCCCTGGCTCCTTGTTT 59.230 57.895 0.00 0.00 0.00 2.83
8934 10978 2.234296 CCCTCCCTGGCTCCTTGTT 61.234 63.158 0.00 0.00 0.00 2.83
8935 10979 2.612115 CCCTCCCTGGCTCCTTGT 60.612 66.667 0.00 0.00 0.00 3.16
8936 10980 2.285668 TCCCTCCCTGGCTCCTTG 60.286 66.667 0.00 0.00 0.00 3.61
8937 10981 2.041928 CTCCCTCCCTGGCTCCTT 59.958 66.667 0.00 0.00 0.00 3.36
8938 10982 4.101077 CCTCCCTCCCTGGCTCCT 62.101 72.222 0.00 0.00 0.00 3.69
8939 10983 4.423209 ACCTCCCTCCCTGGCTCC 62.423 72.222 0.00 0.00 0.00 4.70
8940 10984 2.766229 GACCTCCCTCCCTGGCTC 60.766 72.222 0.00 0.00 0.00 4.70
8941 10985 4.787280 CGACCTCCCTCCCTGGCT 62.787 72.222 0.00 0.00 0.00 4.75
8942 10986 4.779733 TCGACCTCCCTCCCTGGC 62.780 72.222 0.00 0.00 0.00 4.85
8943 10987 2.443016 CTCGACCTCCCTCCCTGG 60.443 72.222 0.00 0.00 0.00 4.45
8944 10988 2.055042 CACTCGACCTCCCTCCCTG 61.055 68.421 0.00 0.00 0.00 4.45
8945 10989 2.360980 CACTCGACCTCCCTCCCT 59.639 66.667 0.00 0.00 0.00 4.20
8946 10990 2.760385 CCACTCGACCTCCCTCCC 60.760 72.222 0.00 0.00 0.00 4.30
8947 10991 2.037527 ACCACTCGACCTCCCTCC 59.962 66.667 0.00 0.00 0.00 4.30
8948 10992 0.898789 TTCACCACTCGACCTCCCTC 60.899 60.000 0.00 0.00 0.00 4.30
8949 10993 0.471211 TTTCACCACTCGACCTCCCT 60.471 55.000 0.00 0.00 0.00 4.20
8950 10994 0.037232 CTTTCACCACTCGACCTCCC 60.037 60.000 0.00 0.00 0.00 4.30
8951 10995 0.037232 CCTTTCACCACTCGACCTCC 60.037 60.000 0.00 0.00 0.00 4.30
8952 10996 0.966920 TCCTTTCACCACTCGACCTC 59.033 55.000 0.00 0.00 0.00 3.85
8953 10997 1.344763 CTTCCTTTCACCACTCGACCT 59.655 52.381 0.00 0.00 0.00 3.85
8954 10998 1.343465 TCTTCCTTTCACCACTCGACC 59.657 52.381 0.00 0.00 0.00 4.79
8955 10999 2.610727 CCTCTTCCTTTCACCACTCGAC 60.611 54.545 0.00 0.00 0.00 4.20
8956 11000 1.618837 CCTCTTCCTTTCACCACTCGA 59.381 52.381 0.00 0.00 0.00 4.04
8957 11001 1.618837 TCCTCTTCCTTTCACCACTCG 59.381 52.381 0.00 0.00 0.00 4.18
8958 11002 3.558109 CCTTCCTCTTCCTTTCACCACTC 60.558 52.174 0.00 0.00 0.00 3.51
8959 11003 2.373502 CCTTCCTCTTCCTTTCACCACT 59.626 50.000 0.00 0.00 0.00 4.00
8960 11004 2.106684 ACCTTCCTCTTCCTTTCACCAC 59.893 50.000 0.00 0.00 0.00 4.16
8961 11005 2.418669 ACCTTCCTCTTCCTTTCACCA 58.581 47.619 0.00 0.00 0.00 4.17
8962 11006 4.565861 CCTTACCTTCCTCTTCCTTTCACC 60.566 50.000 0.00 0.00 0.00 4.02
8963 11007 4.580868 CCTTACCTTCCTCTTCCTTTCAC 58.419 47.826 0.00 0.00 0.00 3.18
8964 11008 3.009143 GCCTTACCTTCCTCTTCCTTTCA 59.991 47.826 0.00 0.00 0.00 2.69
8965 11009 3.009143 TGCCTTACCTTCCTCTTCCTTTC 59.991 47.826 0.00 0.00 0.00 2.62
8966 11010 2.986728 TGCCTTACCTTCCTCTTCCTTT 59.013 45.455 0.00 0.00 0.00 3.11
8967 11011 2.632537 TGCCTTACCTTCCTCTTCCTT 58.367 47.619 0.00 0.00 0.00 3.36
8968 11012 2.344093 TGCCTTACCTTCCTCTTCCT 57.656 50.000 0.00 0.00 0.00 3.36
8969 11013 3.434940 TTTGCCTTACCTTCCTCTTCC 57.565 47.619 0.00 0.00 0.00 3.46
8970 11014 4.652822 TCTTTTGCCTTACCTTCCTCTTC 58.347 43.478 0.00 0.00 0.00 2.87
8971 11015 4.724279 TCTTTTGCCTTACCTTCCTCTT 57.276 40.909 0.00 0.00 0.00 2.85
8972 11016 4.724279 TTCTTTTGCCTTACCTTCCTCT 57.276 40.909 0.00 0.00 0.00 3.69
8973 11017 5.784578 TTTTCTTTTGCCTTACCTTCCTC 57.215 39.130 0.00 0.00 0.00 3.71
8995 11039 0.320508 GCGTCCTCCTCCGAGTTTTT 60.321 55.000 0.00 0.00 33.93 1.94
8996 11040 1.292541 GCGTCCTCCTCCGAGTTTT 59.707 57.895 0.00 0.00 33.93 2.43
8997 11041 2.971452 GCGTCCTCCTCCGAGTTT 59.029 61.111 0.00 0.00 33.93 2.66
8998 11042 3.441290 CGCGTCCTCCTCCGAGTT 61.441 66.667 0.00 0.00 33.93 3.01
9004 11048 4.838486 CTGTCGCGCGTCCTCCTC 62.838 72.222 30.98 12.38 0.00 3.71
9013 11057 3.461982 CAGTGTCGTCTGTCGCGC 61.462 66.667 0.00 0.00 39.67 6.86
9014 11058 2.529005 ATCCAGTGTCGTCTGTCGCG 62.529 60.000 0.00 0.00 39.67 5.87
9015 11059 0.798771 GATCCAGTGTCGTCTGTCGC 60.799 60.000 0.00 0.00 39.67 5.19
9016 11060 0.521450 CGATCCAGTGTCGTCTGTCG 60.521 60.000 0.00 0.00 41.41 4.35
9017 11061 0.803117 TCGATCCAGTGTCGTCTGTC 59.197 55.000 3.41 0.00 39.91 3.51
9018 11062 0.805614 CTCGATCCAGTGTCGTCTGT 59.194 55.000 3.41 0.00 39.91 3.41
9019 11063 0.099613 CCTCGATCCAGTGTCGTCTG 59.900 60.000 3.41 0.00 39.91 3.51
9020 11064 0.322636 ACCTCGATCCAGTGTCGTCT 60.323 55.000 3.41 0.00 39.91 4.18
9021 11065 0.179161 CACCTCGATCCAGTGTCGTC 60.179 60.000 3.41 0.00 39.91 4.20
9022 11066 1.595993 CCACCTCGATCCAGTGTCGT 61.596 60.000 3.41 0.00 39.91 4.34
9023 11067 1.139734 CCACCTCGATCCAGTGTCG 59.860 63.158 0.00 0.00 40.30 4.35
9024 11068 1.067821 GATCCACCTCGATCCAGTGTC 59.932 57.143 0.00 0.00 33.83 3.67
9025 11069 1.115467 GATCCACCTCGATCCAGTGT 58.885 55.000 0.00 0.00 33.83 3.55
9026 11070 0.031314 CGATCCACCTCGATCCAGTG 59.969 60.000 0.00 0.00 41.12 3.66
9027 11071 0.106669 TCGATCCACCTCGATCCAGT 60.107 55.000 0.00 0.00 42.38 4.00
9028 11072 1.032794 TTCGATCCACCTCGATCCAG 58.967 55.000 0.00 0.00 46.16 3.86
9029 11073 0.744874 GTTCGATCCACCTCGATCCA 59.255 55.000 0.00 0.00 46.16 3.41
9030 11074 0.317938 CGTTCGATCCACCTCGATCC 60.318 60.000 0.00 0.00 46.16 3.36
9031 11075 0.935366 GCGTTCGATCCACCTCGATC 60.935 60.000 0.00 0.00 46.16 3.69
9032 11076 1.065928 GCGTTCGATCCACCTCGAT 59.934 57.895 0.00 0.00 46.16 3.59
9033 11077 0.745486 TAGCGTTCGATCCACCTCGA 60.745 55.000 0.00 0.00 45.32 4.04
9034 11078 0.317103 CTAGCGTTCGATCCACCTCG 60.317 60.000 0.00 0.00 39.99 4.63
9035 11079 0.595310 GCTAGCGTTCGATCCACCTC 60.595 60.000 0.00 0.00 0.00 3.85
9036 11080 1.038130 AGCTAGCGTTCGATCCACCT 61.038 55.000 9.55 0.00 0.00 4.00
9037 11081 0.595310 GAGCTAGCGTTCGATCCACC 60.595 60.000 9.55 0.00 0.00 4.61
9038 11082 0.595310 GGAGCTAGCGTTCGATCCAC 60.595 60.000 9.55 0.00 0.00 4.02
9039 11083 1.035385 TGGAGCTAGCGTTCGATCCA 61.035 55.000 15.18 15.18 34.54 3.41
9040 11084 0.315568 ATGGAGCTAGCGTTCGATCC 59.684 55.000 9.55 10.22 0.00 3.36
9041 11085 1.001268 TCATGGAGCTAGCGTTCGATC 60.001 52.381 9.55 0.00 0.00 3.69
9042 11086 1.032794 TCATGGAGCTAGCGTTCGAT 58.967 50.000 9.55 2.26 0.00 3.59
9043 11087 0.100682 GTCATGGAGCTAGCGTTCGA 59.899 55.000 9.55 0.00 0.00 3.71
9044 11088 0.872021 GGTCATGGAGCTAGCGTTCG 60.872 60.000 9.55 0.00 0.00 3.95
9045 11089 0.872021 CGGTCATGGAGCTAGCGTTC 60.872 60.000 9.55 1.82 0.00 3.95
9046 11090 1.141881 CGGTCATGGAGCTAGCGTT 59.858 57.895 9.55 0.00 0.00 4.84
9047 11091 2.786495 CCGGTCATGGAGCTAGCGT 61.786 63.158 9.55 0.00 32.56 5.07
9048 11092 2.028190 CCGGTCATGGAGCTAGCG 59.972 66.667 9.55 0.00 0.00 4.26
9049 11093 2.280457 GCCGGTCATGGAGCTAGC 60.280 66.667 6.62 6.62 0.00 3.42
9050 11094 2.423446 GGCCGGTCATGGAGCTAG 59.577 66.667 0.00 0.00 0.00 3.42
9051 11095 3.536917 CGGCCGGTCATGGAGCTA 61.537 66.667 20.10 0.00 0.00 3.32
9053 11097 4.467084 TTCGGCCGGTCATGGAGC 62.467 66.667 27.83 0.00 0.00 4.70
9054 11098 2.511600 GTTCGGCCGGTCATGGAG 60.512 66.667 27.83 0.00 0.00 3.86
9055 11099 4.444838 CGTTCGGCCGGTCATGGA 62.445 66.667 27.83 0.00 0.00 3.41
9056 11100 4.752879 ACGTTCGGCCGGTCATGG 62.753 66.667 27.83 11.41 0.00 3.66
9057 11101 2.235536 GAAACGTTCGGCCGGTCATG 62.236 60.000 27.83 17.10 0.00 3.07
9058 11102 2.030958 GAAACGTTCGGCCGGTCAT 61.031 57.895 27.83 8.11 0.00 3.06
9059 11103 2.662527 GAAACGTTCGGCCGGTCA 60.663 61.111 27.83 6.94 0.00 4.02
9079 11123 3.099619 ATTTCACATCAGCGCGCCG 62.100 57.895 30.33 19.82 0.00 6.46
9080 11124 1.584483 CATTTCACATCAGCGCGCC 60.584 57.895 30.33 10.31 0.00 6.53
9081 11125 0.454957 AACATTTCACATCAGCGCGC 60.455 50.000 26.66 26.66 0.00 6.86
9082 11126 1.967762 AAACATTTCACATCAGCGCG 58.032 45.000 0.00 0.00 0.00 6.86
9083 11127 2.663119 GGAAAACATTTCACATCAGCGC 59.337 45.455 0.00 0.00 0.00 5.92
9084 11128 4.164822 AGGAAAACATTTCACATCAGCG 57.835 40.909 5.32 0.00 0.00 5.18
9085 11129 6.849588 AAAAGGAAAACATTTCACATCAGC 57.150 33.333 5.32 0.00 0.00 4.26
9108 11152 3.638160 AGCTCCATTGTCTGCTTCAAAAA 59.362 39.130 0.00 0.00 30.96 1.94
9109 11153 3.005050 CAGCTCCATTGTCTGCTTCAAAA 59.995 43.478 0.00 0.00 33.03 2.44
9110 11154 2.555325 CAGCTCCATTGTCTGCTTCAAA 59.445 45.455 0.00 0.00 33.03 2.69
9111 11155 2.156917 CAGCTCCATTGTCTGCTTCAA 58.843 47.619 0.00 0.00 33.03 2.69
9112 11156 1.817357 CAGCTCCATTGTCTGCTTCA 58.183 50.000 0.00 0.00 33.03 3.02
9113 11157 0.450983 GCAGCTCCATTGTCTGCTTC 59.549 55.000 12.60 0.00 46.93 3.86
9114 11158 2.564471 GCAGCTCCATTGTCTGCTT 58.436 52.632 12.60 0.00 46.93 3.91
9115 11159 4.315588 GCAGCTCCATTGTCTGCT 57.684 55.556 12.60 3.49 46.93 4.24
9117 11161 2.089201 TGATTGCAGCTCCATTGTCTG 58.911 47.619 0.00 0.00 0.00 3.51
9118 11162 2.089980 GTGATTGCAGCTCCATTGTCT 58.910 47.619 0.00 0.00 0.00 3.41
9119 11163 1.133790 GGTGATTGCAGCTCCATTGTC 59.866 52.381 0.00 0.00 39.38 3.18
9120 11164 1.180029 GGTGATTGCAGCTCCATTGT 58.820 50.000 0.00 0.00 39.38 2.71
9121 11165 0.099968 CGGTGATTGCAGCTCCATTG 59.900 55.000 9.48 0.00 40.29 2.82
9122 11166 0.322816 ACGGTGATTGCAGCTCCATT 60.323 50.000 9.48 0.00 40.29 3.16
9123 11167 0.322816 AACGGTGATTGCAGCTCCAT 60.323 50.000 9.48 0.00 40.29 3.41
9124 11168 1.073025 AACGGTGATTGCAGCTCCA 59.927 52.632 9.48 0.00 40.29 3.86
9125 11169 0.955428 TCAACGGTGATTGCAGCTCC 60.955 55.000 0.00 0.00 40.29 4.70
9126 11170 1.089920 ATCAACGGTGATTGCAGCTC 58.910 50.000 10.98 0.00 42.03 4.09
9127 11171 0.806868 CATCAACGGTGATTGCAGCT 59.193 50.000 14.71 0.00 42.03 4.24
9128 11172 0.179156 CCATCAACGGTGATTGCAGC 60.179 55.000 14.71 0.00 42.03 5.25
9129 11173 0.179156 GCCATCAACGGTGATTGCAG 60.179 55.000 28.96 12.34 46.98 4.41
9130 11174 1.882311 GCCATCAACGGTGATTGCA 59.118 52.632 28.96 0.00 46.98 4.08
9131 11175 4.792106 GCCATCAACGGTGATTGC 57.208 55.556 22.00 22.00 42.03 3.56
9132 11176 0.452987 CAGGCCATCAACGGTGATTG 59.547 55.000 14.71 12.14 42.03 2.67
9133 11177 0.680921 CCAGGCCATCAACGGTGATT 60.681 55.000 14.71 0.00 42.03 2.57
9134 11178 1.077501 CCAGGCCATCAACGGTGAT 60.078 57.895 10.98 10.98 45.80 3.06
9135 11179 2.350895 CCAGGCCATCAACGGTGA 59.649 61.111 5.17 5.17 38.41 4.02
9136 11180 2.034066 ACCAGGCCATCAACGGTG 59.966 61.111 5.01 0.00 0.00 4.94
9137 11181 2.034066 CACCAGGCCATCAACGGT 59.966 61.111 5.01 0.00 0.00 4.83
9138 11182 2.751436 CCACCAGGCCATCAACGG 60.751 66.667 5.01 0.00 0.00 4.44
9158 11202 0.513717 CACGAAATTGCGTCGACGAC 60.514 55.000 39.74 28.96 43.59 4.34
9159 11203 1.770432 CACGAAATTGCGTCGACGA 59.230 52.632 39.74 21.78 43.59 4.20
9160 11204 1.853192 GCACGAAATTGCGTCGACG 60.853 57.895 32.57 32.57 43.59 5.12
9161 11205 0.383737 TTGCACGAAATTGCGTCGAC 60.384 50.000 8.99 5.18 46.20 4.20
9162 11206 0.383737 GTTGCACGAAATTGCGTCGA 60.384 50.000 8.99 1.46 46.20 4.20
9163 11207 1.643351 CGTTGCACGAAATTGCGTCG 61.643 55.000 8.99 5.92 46.05 5.12
9164 11208 2.043022 CGTTGCACGAAATTGCGTC 58.957 52.632 8.99 5.03 46.05 5.19
9165 11209 4.203967 CGTTGCACGAAATTGCGT 57.796 50.000 5.39 5.39 46.05 5.24
9177 11221 1.154413 CACCGTTGATGCTCGTTGC 60.154 57.895 0.00 0.00 43.25 4.17
9178 11222 0.439985 CTCACCGTTGATGCTCGTTG 59.560 55.000 0.00 0.00 0.00 4.10
9179 11223 0.670546 CCTCACCGTTGATGCTCGTT 60.671 55.000 0.00 0.00 0.00 3.85
9180 11224 1.079819 CCTCACCGTTGATGCTCGT 60.080 57.895 0.00 0.00 0.00 4.18
9181 11225 1.811266 CCCTCACCGTTGATGCTCG 60.811 63.158 0.00 0.00 0.00 5.03
9182 11226 0.741221 GTCCCTCACCGTTGATGCTC 60.741 60.000 0.00 0.00 0.00 4.26
9183 11227 1.296715 GTCCCTCACCGTTGATGCT 59.703 57.895 0.00 0.00 0.00 3.79
9184 11228 2.100631 CGTCCCTCACCGTTGATGC 61.101 63.158 0.00 0.00 0.00 3.91
9185 11229 1.447838 CCGTCCCTCACCGTTGATG 60.448 63.158 0.00 0.00 0.00 3.07
9186 11230 2.978824 CCGTCCCTCACCGTTGAT 59.021 61.111 0.00 0.00 0.00 2.57
9187 11231 3.998672 GCCGTCCCTCACCGTTGA 61.999 66.667 0.00 0.00 0.00 3.18
9198 11242 4.509737 GTAGCTCCACCGCCGTCC 62.510 72.222 0.00 0.00 0.00 4.79
9199 11243 4.849329 CGTAGCTCCACCGCCGTC 62.849 72.222 0.00 0.00 0.00 4.79
9201 11245 4.849329 GTCGTAGCTCCACCGCCG 62.849 72.222 0.00 0.00 0.00 6.46
9202 11246 4.509737 GGTCGTAGCTCCACCGCC 62.510 72.222 0.00 0.00 0.00 6.13
9203 11247 4.849329 CGGTCGTAGCTCCACCGC 62.849 72.222 15.73 1.22 46.08 5.68
9205 11249 3.834799 CCCGGTCGTAGCTCCACC 61.835 72.222 0.00 0.00 0.00 4.61
9206 11250 3.834799 CCCCGGTCGTAGCTCCAC 61.835 72.222 0.00 0.00 0.00 4.02
9208 11252 4.828296 TCCCCCGGTCGTAGCTCC 62.828 72.222 0.00 0.00 0.00 4.70
9209 11253 3.217743 CTCCCCCGGTCGTAGCTC 61.218 72.222 0.00 0.00 0.00 4.09
9212 11256 1.897615 CTAGCTCCCCCGGTCGTAG 60.898 68.421 0.00 0.00 0.00 3.51
9213 11257 1.925285 TTCTAGCTCCCCCGGTCGTA 61.925 60.000 0.00 0.00 0.00 3.43
9214 11258 3.292481 TTCTAGCTCCCCCGGTCGT 62.292 63.158 0.00 0.00 0.00 4.34
9215 11259 2.441532 TTCTAGCTCCCCCGGTCG 60.442 66.667 0.00 0.00 0.00 4.79
9216 11260 2.798364 GCTTCTAGCTCCCCCGGTC 61.798 68.421 0.00 0.00 38.45 4.79
9217 11261 2.764547 GCTTCTAGCTCCCCCGGT 60.765 66.667 0.00 0.00 38.45 5.28
9218 11262 3.917760 CGCTTCTAGCTCCCCCGG 61.918 72.222 0.00 0.00 39.60 5.73
9219 11263 2.722201 AACGCTTCTAGCTCCCCCG 61.722 63.158 0.00 0.00 39.60 5.73
9220 11264 1.153349 CAACGCTTCTAGCTCCCCC 60.153 63.158 0.00 0.00 39.60 5.40
9221 11265 1.815840 GCAACGCTTCTAGCTCCCC 60.816 63.158 0.00 0.00 39.60 4.81
9222 11266 1.815840 GGCAACGCTTCTAGCTCCC 60.816 63.158 0.00 0.00 39.60 4.30
9223 11267 3.801129 GGCAACGCTTCTAGCTCC 58.199 61.111 0.00 0.00 39.60 4.70
9257 11301 2.527100 GCATGAAAGAACTGCATCTGC 58.473 47.619 0.00 0.00 42.50 4.26
9258 11302 2.161012 ACGCATGAAAGAACTGCATCTG 59.839 45.455 0.00 0.00 35.64 2.90
9259 11303 2.430465 ACGCATGAAAGAACTGCATCT 58.570 42.857 0.00 0.00 35.64 2.90
9260 11304 2.907910 ACGCATGAAAGAACTGCATC 57.092 45.000 0.00 0.00 35.64 3.91
9261 11305 2.923605 GCAACGCATGAAAGAACTGCAT 60.924 45.455 0.00 0.00 35.64 3.96
9262 11306 1.600164 GCAACGCATGAAAGAACTGCA 60.600 47.619 0.00 0.00 35.64 4.41
9263 11307 1.055338 GCAACGCATGAAAGAACTGC 58.945 50.000 0.00 0.00 0.00 4.40
9264 11308 1.069973 TCGCAACGCATGAAAGAACTG 60.070 47.619 0.00 0.00 0.00 3.16
9265 11309 1.069906 GTCGCAACGCATGAAAGAACT 60.070 47.619 0.00 0.00 0.00 3.01
9266 11310 1.318251 GTCGCAACGCATGAAAGAAC 58.682 50.000 0.00 0.00 0.00 3.01
9267 11311 0.110867 CGTCGCAACGCATGAAAGAA 60.111 50.000 0.00 0.00 42.82 2.52
9268 11312 1.491127 CGTCGCAACGCATGAAAGA 59.509 52.632 0.00 0.00 42.82 2.52
9269 11313 4.026156 CGTCGCAACGCATGAAAG 57.974 55.556 0.00 0.00 42.82 2.62
9278 11322 1.154093 TCCTCATCGTCGTCGCAAC 60.154 57.895 0.00 0.00 36.96 4.17
9279 11323 1.154093 GTCCTCATCGTCGTCGCAA 60.154 57.895 0.00 0.00 36.96 4.85
9280 11324 2.483745 GTCCTCATCGTCGTCGCA 59.516 61.111 0.00 0.00 36.96 5.10
9281 11325 2.648102 CGTCCTCATCGTCGTCGC 60.648 66.667 0.00 0.00 36.96 5.19
9282 11326 1.296722 GTCGTCCTCATCGTCGTCG 60.297 63.158 0.00 0.00 38.55 5.12
9283 11327 1.062206 GGTCGTCCTCATCGTCGTC 59.938 63.158 0.00 0.00 0.00 4.20
9284 11328 2.747822 CGGTCGTCCTCATCGTCGT 61.748 63.158 0.00 0.00 0.00 4.34
9285 11329 2.022902 CGGTCGTCCTCATCGTCG 59.977 66.667 0.00 0.00 0.00 5.12
9286 11330 2.408022 CCGGTCGTCCTCATCGTC 59.592 66.667 0.00 0.00 0.00 4.20
9287 11331 3.823330 GCCGGTCGTCCTCATCGT 61.823 66.667 1.90 0.00 0.00 3.73
9288 11332 4.907034 CGCCGGTCGTCCTCATCG 62.907 72.222 1.90 0.00 0.00 3.84
9289 11333 3.471244 CTCGCCGGTCGTCCTCATC 62.471 68.421 16.00 0.00 39.67 2.92
9290 11334 3.518998 CTCGCCGGTCGTCCTCAT 61.519 66.667 16.00 0.00 39.67 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.