Multiple sequence alignment - TraesCS5A01G359200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G359200 chr5A 100.000 4771 0 0 1 4771 561181095 561176325 0.000000e+00 8811.0
1 TraesCS5A01G359200 chr5A 90.581 1688 117 17 2348 4022 493032157 493030499 0.000000e+00 2198.0
2 TraesCS5A01G359200 chr5A 93.703 1064 65 2 1258 2319 217860026 217861089 0.000000e+00 1592.0
3 TraesCS5A01G359200 chr5A 93.482 1074 58 5 1258 2319 42659260 42660333 0.000000e+00 1585.0
4 TraesCS5A01G359200 chr5A 93.421 1064 68 2 1258 2319 217854422 217855485 0.000000e+00 1576.0
5 TraesCS5A01G359200 chr5A 93.078 1069 61 5 1258 2319 42670733 42671795 0.000000e+00 1552.0
6 TraesCS5A01G359200 chr5A 100.000 625 0 0 4964 5588 561176132 561175508 0.000000e+00 1155.0
7 TraesCS5A01G359200 chr5A 87.377 610 37 18 449 1028 665611766 665611167 0.000000e+00 664.0
8 TraesCS5A01G359200 chr5A 90.737 475 38 2 3567 4035 493025992 493025518 3.670000e-176 628.0
9 TraesCS5A01G359200 chr5A 85.064 549 71 10 4077 4623 511368029 511367490 2.940000e-152 549.0
10 TraesCS5A01G359200 chr5A 85.811 148 20 1 36 183 29162850 29162704 7.500000e-34 156.0
11 TraesCS5A01G359200 chr5A 85.507 138 9 4 1130 1257 665610728 665610592 3.510000e-27 134.0
12 TraesCS5A01G359200 chr5D 92.049 1698 113 14 2348 4035 389781217 389779532 0.000000e+00 2368.0
13 TraesCS5A01G359200 chr5D 96.869 990 28 1 2737 3726 444318368 444317382 0.000000e+00 1653.0
14 TraesCS5A01G359200 chr5D 87.120 559 56 13 4077 4625 367231360 367230808 2.210000e-173 619.0
15 TraesCS5A01G359200 chr5D 83.554 681 59 20 4077 4756 444316650 444316022 6.240000e-164 588.0
16 TraesCS5A01G359200 chr5D 92.670 382 7 3 2366 2747 444326205 444325845 1.070000e-146 531.0
17 TraesCS5A01G359200 chr5D 88.706 425 31 2 4964 5372 444315714 444315291 2.320000e-138 503.0
18 TraesCS5A01G359200 chr5D 94.921 315 13 1 3724 4035 444317112 444316798 1.810000e-134 490.0
19 TraesCS5A01G359200 chr5D 82.403 233 14 8 212 442 444326426 444326219 1.600000e-40 178.0
20 TraesCS5A01G359200 chr5D 90.833 120 11 0 3852 3971 389702666 389702547 1.610000e-35 161.0
21 TraesCS5A01G359200 chr5D 84.667 150 21 2 32 180 513977412 513977264 1.250000e-31 148.0
22 TraesCS5A01G359200 chr5B 91.152 1684 128 13 2349 4022 469982464 469980792 0.000000e+00 2265.0
23 TraesCS5A01G359200 chr5B 76.205 332 42 22 948 1257 646373646 646373330 2.100000e-29 141.0
24 TraesCS5A01G359200 chr5B 88.496 113 7 1 5468 5574 541093233 541093121 1.260000e-26 132.0
25 TraesCS5A01G359200 chr7A 93.680 1076 57 6 1249 2313 130186531 130185456 0.000000e+00 1600.0
26 TraesCS5A01G359200 chr7A 92.034 1067 80 5 1258 2319 603535054 603533988 0.000000e+00 1495.0
27 TraesCS5A01G359200 chr7A 90.657 289 19 7 681 966 643467791 643468074 1.470000e-100 377.0
28 TraesCS5A01G359200 chr7A 90.657 289 19 7 681 966 643505854 643506137 1.470000e-100 377.0
29 TraesCS5A01G359200 chr7A 79.916 239 30 10 927 1162 293429883 293430106 5.790000e-35 159.0
30 TraesCS5A01G359200 chr7A 83.594 128 16 5 681 805 654112177 654112052 1.270000e-21 115.0
31 TraesCS5A01G359200 chr3A 93.271 1070 68 4 1254 2319 733929195 733930264 0.000000e+00 1574.0
32 TraesCS5A01G359200 chr3A 92.603 1068 68 7 1258 2319 30404826 30403764 0.000000e+00 1524.0
33 TraesCS5A01G359200 chr3A 97.504 641 14 2 471 1109 532932337 532931697 0.000000e+00 1094.0
34 TraesCS5A01G359200 chr3A 92.079 101 5 1 1157 1257 532931697 532931600 7.550000e-29 139.0
35 TraesCS5A01G359200 chr3A 82.609 92 16 0 5377 5468 428325886 428325977 1.290000e-11 82.4
36 TraesCS5A01G359200 chr3A 82.609 92 16 0 5377 5468 441062837 441062928 1.290000e-11 82.4
37 TraesCS5A01G359200 chr2A 92.250 1071 77 5 1255 2319 61787073 61788143 0.000000e+00 1513.0
38 TraesCS5A01G359200 chr2A 87.765 613 63 9 3053 3655 706210091 706209481 0.000000e+00 706.0
39 TraesCS5A01G359200 chr2A 85.278 557 66 13 4077 4625 198857693 198858241 1.360000e-155 560.0
40 TraesCS5A01G359200 chr2A 85.091 550 61 13 4077 4619 764192030 764192565 4.920000e-150 542.0
41 TraesCS5A01G359200 chr2A 84.657 554 67 14 4077 4625 473184948 473185488 2.290000e-148 536.0
42 TraesCS5A01G359200 chr2A 84.698 464 65 5 2582 3040 706210626 706210164 5.100000e-125 459.0
43 TraesCS5A01G359200 chr2B 81.373 1471 210 32 2588 4017 709992033 709993480 0.000000e+00 1140.0
44 TraesCS5A01G359200 chr2B 85.729 946 108 20 3066 3999 678388371 678387441 0.000000e+00 974.0
45 TraesCS5A01G359200 chr2B 83.153 463 70 7 2582 3038 678388913 678388453 3.110000e-112 416.0
46 TraesCS5A01G359200 chr2B 81.405 242 24 15 927 1162 43280036 43279810 1.600000e-40 178.0
47 TraesCS5A01G359200 chr2D 84.883 979 120 19 3053 4023 565941431 565940473 0.000000e+00 963.0
48 TraesCS5A01G359200 chr2D 81.455 976 147 21 3053 4017 587357566 587358518 0.000000e+00 769.0
49 TraesCS5A01G359200 chr2D 83.224 608 67 17 4039 4624 350356651 350356057 4.960000e-145 525.0
50 TraesCS5A01G359200 chr2D 89.074 421 40 5 3620 4035 596379361 596378942 8.300000e-143 518.0
51 TraesCS5A01G359200 chr2D 83.938 386 56 5 2582 2962 565941853 565941469 1.140000e-96 364.0
52 TraesCS5A01G359200 chr6B 87.935 804 52 17 471 1240 699975699 699974907 0.000000e+00 905.0
53 TraesCS5A01G359200 chr6B 92.373 590 32 8 673 1257 714646597 714647178 0.000000e+00 828.0
54 TraesCS5A01G359200 chr6B 94.444 90 4 1 244 332 149729574 149729663 2.720000e-28 137.0
55 TraesCS5A01G359200 chr4B 85.946 555 66 11 4077 4625 624516400 624515852 2.900000e-162 582.0
56 TraesCS5A01G359200 chr4B 81.556 347 52 12 2688 3028 637723971 637723631 5.510000e-70 276.0
57 TraesCS5A01G359200 chr4B 80.426 235 24 16 926 1154 671719882 671719664 5.790000e-35 159.0
58 TraesCS5A01G359200 chr1A 84.950 598 65 16 4044 4625 532231807 532231219 2.900000e-162 582.0
59 TraesCS5A01G359200 chr1A 84.919 557 71 13 4077 4625 441776337 441776888 8.180000e-153 551.0
60 TraesCS5A01G359200 chr1A 85.263 95 14 0 5376 5470 8178256 8178350 1.280000e-16 99.0
61 TraesCS5A01G359200 chr1A 85.263 95 14 0 5376 5470 8208662 8208756 1.280000e-16 99.0
62 TraesCS5A01G359200 chr1A 85.263 95 14 0 5376 5470 8209658 8209752 1.280000e-16 99.0
63 TraesCS5A01G359200 chr1A 100.000 35 0 0 1223 1257 121573590 121573624 1.300000e-06 65.8
64 TraesCS5A01G359200 chr3B 83.688 564 68 12 489 1041 818259860 818259310 1.390000e-140 510.0
65 TraesCS5A01G359200 chr3B 83.333 564 70 12 489 1041 818225201 818224651 3.010000e-137 499.0
66 TraesCS5A01G359200 chr3B 87.500 152 16 1 33 184 800067579 800067727 7.440000e-39 172.0
67 TraesCS5A01G359200 chr6D 88.571 420 43 3 3620 4035 198923863 198923445 6.460000e-139 505.0
68 TraesCS5A01G359200 chr6D 85.806 155 16 3 182 332 76049747 76049899 5.790000e-35 159.0
69 TraesCS5A01G359200 chr6D 84.768 151 21 1 32 182 428071144 428071292 3.490000e-32 150.0
70 TraesCS5A01G359200 chr1D 87.273 165 17 2 182 342 893577 893741 9.560000e-43 185.0
71 TraesCS5A01G359200 chr1D 80.591 237 25 16 931 1160 405386455 405386233 4.480000e-36 163.0
72 TraesCS5A01G359200 chr1D 85.542 83 12 0 5386 5468 6741612 6741694 2.770000e-13 87.9
73 TraesCS5A01G359200 chr1D 82.979 94 13 3 5376 5468 48903124 48903215 1.290000e-11 82.4
74 TraesCS5A01G359200 chr1D 97.436 39 0 1 1220 1257 405386153 405386115 1.300000e-06 65.8
75 TraesCS5A01G359200 chrUn 87.500 152 16 1 33 184 475231001 475230853 7.440000e-39 172.0
76 TraesCS5A01G359200 chrUn 86.842 152 17 2 33 184 42026933 42027081 3.460000e-37 167.0
77 TraesCS5A01G359200 chrUn 86.842 152 17 2 33 184 260906070 260905922 3.460000e-37 167.0
78 TraesCS5A01G359200 chr4D 80.417 240 28 10 927 1162 467989719 467989943 1.250000e-36 165.0
79 TraesCS5A01G359200 chr4D 85.366 82 12 0 5387 5468 396625692 396625773 9.970000e-13 86.1
80 TraesCS5A01G359200 chr4D 100.000 35 0 0 1223 1257 467990024 467990058 1.300000e-06 65.8
81 TraesCS5A01G359200 chr7D 95.876 97 4 0 2350 2446 565907271 565907175 2.080000e-34 158.0
82 TraesCS5A01G359200 chr3D 82.609 92 16 0 5377 5468 3542459 3542550 1.290000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G359200 chr5A 561175508 561181095 5587 True 4983.0 8811 100.0000 1 5588 2 chr5A.!!$R5 5587
1 TraesCS5A01G359200 chr5A 493030499 493032157 1658 True 2198.0 2198 90.5810 2348 4022 1 chr5A.!!$R3 1674
2 TraesCS5A01G359200 chr5A 217860026 217861089 1063 False 1592.0 1592 93.7030 1258 2319 1 chr5A.!!$F4 1061
3 TraesCS5A01G359200 chr5A 42659260 42660333 1073 False 1585.0 1585 93.4820 1258 2319 1 chr5A.!!$F1 1061
4 TraesCS5A01G359200 chr5A 217854422 217855485 1063 False 1576.0 1576 93.4210 1258 2319 1 chr5A.!!$F3 1061
5 TraesCS5A01G359200 chr5A 42670733 42671795 1062 False 1552.0 1552 93.0780 1258 2319 1 chr5A.!!$F2 1061
6 TraesCS5A01G359200 chr5A 511367490 511368029 539 True 549.0 549 85.0640 4077 4623 1 chr5A.!!$R4 546
7 TraesCS5A01G359200 chr5A 665610592 665611766 1174 True 399.0 664 86.4420 449 1257 2 chr5A.!!$R6 808
8 TraesCS5A01G359200 chr5D 389779532 389781217 1685 True 2368.0 2368 92.0490 2348 4035 1 chr5D.!!$R3 1687
9 TraesCS5A01G359200 chr5D 444315291 444318368 3077 True 808.5 1653 91.0125 2737 5372 4 chr5D.!!$R5 2635
10 TraesCS5A01G359200 chr5D 367230808 367231360 552 True 619.0 619 87.1200 4077 4625 1 chr5D.!!$R1 548
11 TraesCS5A01G359200 chr5D 444325845 444326426 581 True 354.5 531 87.5365 212 2747 2 chr5D.!!$R6 2535
12 TraesCS5A01G359200 chr5B 469980792 469982464 1672 True 2265.0 2265 91.1520 2349 4022 1 chr5B.!!$R1 1673
13 TraesCS5A01G359200 chr7A 130185456 130186531 1075 True 1600.0 1600 93.6800 1249 2313 1 chr7A.!!$R1 1064
14 TraesCS5A01G359200 chr7A 603533988 603535054 1066 True 1495.0 1495 92.0340 1258 2319 1 chr7A.!!$R2 1061
15 TraesCS5A01G359200 chr3A 733929195 733930264 1069 False 1574.0 1574 93.2710 1254 2319 1 chr3A.!!$F3 1065
16 TraesCS5A01G359200 chr3A 30403764 30404826 1062 True 1524.0 1524 92.6030 1258 2319 1 chr3A.!!$R1 1061
17 TraesCS5A01G359200 chr3A 532931600 532932337 737 True 616.5 1094 94.7915 471 1257 2 chr3A.!!$R2 786
18 TraesCS5A01G359200 chr2A 61787073 61788143 1070 False 1513.0 1513 92.2500 1255 2319 1 chr2A.!!$F1 1064
19 TraesCS5A01G359200 chr2A 706209481 706210626 1145 True 582.5 706 86.2315 2582 3655 2 chr2A.!!$R1 1073
20 TraesCS5A01G359200 chr2A 198857693 198858241 548 False 560.0 560 85.2780 4077 4625 1 chr2A.!!$F2 548
21 TraesCS5A01G359200 chr2A 764192030 764192565 535 False 542.0 542 85.0910 4077 4619 1 chr2A.!!$F4 542
22 TraesCS5A01G359200 chr2A 473184948 473185488 540 False 536.0 536 84.6570 4077 4625 1 chr2A.!!$F3 548
23 TraesCS5A01G359200 chr2B 709992033 709993480 1447 False 1140.0 1140 81.3730 2588 4017 1 chr2B.!!$F1 1429
24 TraesCS5A01G359200 chr2B 678387441 678388913 1472 True 695.0 974 84.4410 2582 3999 2 chr2B.!!$R2 1417
25 TraesCS5A01G359200 chr2D 587357566 587358518 952 False 769.0 769 81.4550 3053 4017 1 chr2D.!!$F1 964
26 TraesCS5A01G359200 chr2D 565940473 565941853 1380 True 663.5 963 84.4105 2582 4023 2 chr2D.!!$R3 1441
27 TraesCS5A01G359200 chr2D 350356057 350356651 594 True 525.0 525 83.2240 4039 4624 1 chr2D.!!$R1 585
28 TraesCS5A01G359200 chr6B 699974907 699975699 792 True 905.0 905 87.9350 471 1240 1 chr6B.!!$R1 769
29 TraesCS5A01G359200 chr6B 714646597 714647178 581 False 828.0 828 92.3730 673 1257 1 chr6B.!!$F2 584
30 TraesCS5A01G359200 chr4B 624515852 624516400 548 True 582.0 582 85.9460 4077 4625 1 chr4B.!!$R1 548
31 TraesCS5A01G359200 chr1A 532231219 532231807 588 True 582.0 582 84.9500 4044 4625 1 chr1A.!!$R1 581
32 TraesCS5A01G359200 chr1A 441776337 441776888 551 False 551.0 551 84.9190 4077 4625 1 chr1A.!!$F3 548
33 TraesCS5A01G359200 chr3B 818259310 818259860 550 True 510.0 510 83.6880 489 1041 1 chr3B.!!$R2 552
34 TraesCS5A01G359200 chr3B 818224651 818225201 550 True 499.0 499 83.3330 489 1041 1 chr3B.!!$R1 552

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
40 41 0.036306 GCGGAAGGGAACTGGAAGAA 59.964 55.000 0.0 0.0 42.68 2.52 F
285 286 0.238289 GCGGATGTTCCTGTGTTGTG 59.762 55.000 0.0 0.0 33.30 3.33 F
1730 2185 0.250338 AGGACTCAAAAGGTGCGGTC 60.250 55.000 0.0 0.0 0.00 4.79 F
2481 2967 0.035439 CGCACACCAAGGTTCCCTAT 60.035 55.000 0.0 0.0 31.13 2.57 F
3486 4077 1.078426 GGTGACCTGCGGCTACAAT 60.078 57.895 0.0 0.0 0.00 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1696 2151 0.324091 GTCCTGTACGGGAGAAGGGA 60.324 60.000 24.28 0.0 35.87 4.20 R
1997 2454 1.210967 AGGTCACGTGGGAGTTGAAAA 59.789 47.619 17.00 0.0 0.00 2.29 R
3726 4330 0.528466 CACACGTGGGATCATCTCCG 60.528 60.000 21.57 0.0 46.01 4.63 R
4055 5035 3.538591 ACATGCGATGAGATGTGAACAT 58.461 40.909 0.00 0.0 39.70 2.71 R
5089 6237 0.032952 CACCTCGGAGTGGAAAACGA 59.967 55.000 4.02 0.0 45.27 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.747855 GGCTGCGGAAGGGAACTG 60.748 66.667 0.00 0.00 42.68 3.16
35 36 2.747855 GCTGCGGAAGGGAACTGG 60.748 66.667 0.00 0.00 42.68 4.00
36 37 3.068881 CTGCGGAAGGGAACTGGA 58.931 61.111 0.00 0.00 42.68 3.86
37 38 1.374947 CTGCGGAAGGGAACTGGAA 59.625 57.895 0.00 0.00 42.68 3.53
38 39 0.674895 CTGCGGAAGGGAACTGGAAG 60.675 60.000 0.00 0.00 42.68 3.46
39 40 1.125093 TGCGGAAGGGAACTGGAAGA 61.125 55.000 0.00 0.00 42.68 2.87
40 41 0.036306 GCGGAAGGGAACTGGAAGAA 59.964 55.000 0.00 0.00 42.68 2.52
41 42 1.946283 GCGGAAGGGAACTGGAAGAAG 60.946 57.143 0.00 0.00 42.68 2.85
42 43 1.339151 CGGAAGGGAACTGGAAGAAGG 60.339 57.143 0.00 0.00 42.68 3.46
43 44 1.985895 GGAAGGGAACTGGAAGAAGGA 59.014 52.381 0.00 0.00 42.68 3.36
44 45 2.026729 GGAAGGGAACTGGAAGAAGGAG 60.027 54.545 0.00 0.00 42.68 3.69
45 46 0.988063 AGGGAACTGGAAGAAGGAGC 59.012 55.000 0.00 0.00 41.13 4.70
46 47 0.988063 GGGAACTGGAAGAAGGAGCT 59.012 55.000 0.00 0.00 37.43 4.09
47 48 1.065782 GGGAACTGGAAGAAGGAGCTC 60.066 57.143 4.71 4.71 37.43 4.09
48 49 1.905894 GGAACTGGAAGAAGGAGCTCT 59.094 52.381 14.64 0.00 37.43 4.09
49 50 2.304470 GGAACTGGAAGAAGGAGCTCTT 59.696 50.000 14.64 2.08 38.39 2.85
50 51 3.244735 GGAACTGGAAGAAGGAGCTCTTT 60.245 47.826 11.38 11.38 35.76 2.52
51 52 4.020128 GGAACTGGAAGAAGGAGCTCTTTA 60.020 45.833 11.55 0.00 35.76 1.85
52 53 5.338789 GGAACTGGAAGAAGGAGCTCTTTAT 60.339 44.000 11.55 5.34 35.76 1.40
53 54 5.351948 ACTGGAAGAAGGAGCTCTTTATC 57.648 43.478 11.55 12.29 35.76 1.75
54 55 4.163268 ACTGGAAGAAGGAGCTCTTTATCC 59.837 45.833 24.80 24.80 39.23 2.59
55 56 6.053239 ACTGGAAGAAGGAGCTCTTTATCCT 61.053 44.000 28.36 15.01 42.50 3.24
56 57 5.529289 TGGAAGAAGGAGCTCTTTATCCTA 58.471 41.667 28.36 18.71 45.39 2.94
57 58 5.600484 TGGAAGAAGGAGCTCTTTATCCTAG 59.400 44.000 28.36 0.00 45.39 3.02
58 59 5.600898 GGAAGAAGGAGCTCTTTATCCTAGT 59.399 44.000 24.50 5.19 45.39 2.57
59 60 6.099125 GGAAGAAGGAGCTCTTTATCCTAGTT 59.901 42.308 24.50 8.85 45.39 2.24
60 61 7.365206 GGAAGAAGGAGCTCTTTATCCTAGTTT 60.365 40.741 24.50 3.99 45.39 2.66
61 62 7.503492 AGAAGGAGCTCTTTATCCTAGTTTT 57.497 36.000 11.55 0.00 45.39 2.43
62 63 8.611051 AGAAGGAGCTCTTTATCCTAGTTTTA 57.389 34.615 11.55 0.00 45.39 1.52
63 64 8.479689 AGAAGGAGCTCTTTATCCTAGTTTTAC 58.520 37.037 11.55 0.00 45.39 2.01
64 65 7.735326 AGGAGCTCTTTATCCTAGTTTTACA 57.265 36.000 14.64 0.00 44.28 2.41
65 66 7.787028 AGGAGCTCTTTATCCTAGTTTTACAG 58.213 38.462 14.64 0.00 44.28 2.74
66 67 7.400627 AGGAGCTCTTTATCCTAGTTTTACAGT 59.599 37.037 14.64 0.00 44.28 3.55
67 68 8.041919 GGAGCTCTTTATCCTAGTTTTACAGTT 58.958 37.037 14.64 0.00 32.51 3.16
68 69 9.438228 GAGCTCTTTATCCTAGTTTTACAGTTT 57.562 33.333 6.43 0.00 0.00 2.66
69 70 9.220767 AGCTCTTTATCCTAGTTTTACAGTTTG 57.779 33.333 0.00 0.00 0.00 2.93
70 71 9.000486 GCTCTTTATCCTAGTTTTACAGTTTGT 58.000 33.333 0.00 0.00 0.00 2.83
88 89 8.736244 ACAGTTTGTTTTATAGTGTCTGTTTGT 58.264 29.630 0.00 0.00 31.02 2.83
89 90 9.221775 CAGTTTGTTTTATAGTGTCTGTTTGTC 57.778 33.333 0.00 0.00 0.00 3.18
90 91 8.403236 AGTTTGTTTTATAGTGTCTGTTTGTCC 58.597 33.333 0.00 0.00 0.00 4.02
91 92 6.533819 TGTTTTATAGTGTCTGTTTGTCCG 57.466 37.500 0.00 0.00 0.00 4.79
92 93 5.049954 TGTTTTATAGTGTCTGTTTGTCCGC 60.050 40.000 0.00 0.00 0.00 5.54
93 94 2.831685 ATAGTGTCTGTTTGTCCGCA 57.168 45.000 0.00 0.00 0.00 5.69
94 95 2.148916 TAGTGTCTGTTTGTCCGCAG 57.851 50.000 0.00 0.00 0.00 5.18
95 96 1.160329 AGTGTCTGTTTGTCCGCAGC 61.160 55.000 0.00 0.00 33.09 5.25
96 97 1.146041 TGTCTGTTTGTCCGCAGCT 59.854 52.632 0.00 0.00 33.09 4.24
97 98 0.391228 TGTCTGTTTGTCCGCAGCTA 59.609 50.000 0.00 0.00 33.09 3.32
98 99 1.202592 TGTCTGTTTGTCCGCAGCTAA 60.203 47.619 0.00 0.00 33.09 3.09
99 100 1.871039 GTCTGTTTGTCCGCAGCTAAA 59.129 47.619 0.00 0.00 33.09 1.85
100 101 2.289547 GTCTGTTTGTCCGCAGCTAAAA 59.710 45.455 0.00 0.00 33.09 1.52
101 102 3.058224 GTCTGTTTGTCCGCAGCTAAAAT 60.058 43.478 0.00 0.00 33.09 1.82
102 103 3.058293 TCTGTTTGTCCGCAGCTAAAATG 60.058 43.478 0.00 0.00 33.09 2.32
103 104 2.881513 TGTTTGTCCGCAGCTAAAATGA 59.118 40.909 0.00 0.00 0.00 2.57
104 105 3.316588 TGTTTGTCCGCAGCTAAAATGAA 59.683 39.130 0.00 0.00 0.00 2.57
105 106 3.552604 TTGTCCGCAGCTAAAATGAAC 57.447 42.857 0.00 0.00 0.00 3.18
106 107 1.810151 TGTCCGCAGCTAAAATGAACC 59.190 47.619 0.00 0.00 0.00 3.62
107 108 2.084546 GTCCGCAGCTAAAATGAACCT 58.915 47.619 0.00 0.00 0.00 3.50
108 109 2.488153 GTCCGCAGCTAAAATGAACCTT 59.512 45.455 0.00 0.00 0.00 3.50
109 110 3.057526 GTCCGCAGCTAAAATGAACCTTT 60.058 43.478 0.00 0.00 0.00 3.11
110 111 4.155280 GTCCGCAGCTAAAATGAACCTTTA 59.845 41.667 0.00 0.00 0.00 1.85
111 112 4.762765 TCCGCAGCTAAAATGAACCTTTAA 59.237 37.500 0.00 0.00 0.00 1.52
112 113 5.417580 TCCGCAGCTAAAATGAACCTTTAAT 59.582 36.000 0.00 0.00 0.00 1.40
113 114 6.600032 TCCGCAGCTAAAATGAACCTTTAATA 59.400 34.615 0.00 0.00 0.00 0.98
114 115 7.284489 TCCGCAGCTAAAATGAACCTTTAATAT 59.716 33.333 0.00 0.00 0.00 1.28
115 116 7.379529 CCGCAGCTAAAATGAACCTTTAATATG 59.620 37.037 0.00 0.00 0.00 1.78
116 117 7.915397 CGCAGCTAAAATGAACCTTTAATATGT 59.085 33.333 0.00 0.00 0.00 2.29
145 146 7.605410 TTTTCGATCTGTATCCCAGTTTTAC 57.395 36.000 0.00 0.00 42.19 2.01
146 147 5.925506 TCGATCTGTATCCCAGTTTTACA 57.074 39.130 0.00 0.00 42.19 2.41
147 148 5.902681 TCGATCTGTATCCCAGTTTTACAG 58.097 41.667 3.51 3.51 42.60 2.74
148 149 5.421056 TCGATCTGTATCCCAGTTTTACAGT 59.579 40.000 8.64 0.00 42.13 3.55
149 150 6.070995 TCGATCTGTATCCCAGTTTTACAGTT 60.071 38.462 8.64 2.01 42.13 3.16
150 151 6.594159 CGATCTGTATCCCAGTTTTACAGTTT 59.406 38.462 8.64 0.28 42.13 2.66
151 152 7.413000 CGATCTGTATCCCAGTTTTACAGTTTG 60.413 40.741 8.64 2.58 42.13 2.93
152 153 5.472137 TCTGTATCCCAGTTTTACAGTTTGC 59.528 40.000 8.64 0.00 42.13 3.68
153 154 5.133941 TGTATCCCAGTTTTACAGTTTGCA 58.866 37.500 0.00 0.00 0.00 4.08
154 155 5.594725 TGTATCCCAGTTTTACAGTTTGCAA 59.405 36.000 0.00 0.00 0.00 4.08
155 156 4.647424 TCCCAGTTTTACAGTTTGCAAG 57.353 40.909 0.00 0.00 0.00 4.01
156 157 4.020543 TCCCAGTTTTACAGTTTGCAAGT 58.979 39.130 0.00 0.00 0.00 3.16
157 158 4.464597 TCCCAGTTTTACAGTTTGCAAGTT 59.535 37.500 0.00 0.00 0.00 2.66
158 159 5.046950 TCCCAGTTTTACAGTTTGCAAGTTT 60.047 36.000 0.00 0.00 0.00 2.66
159 160 6.153000 TCCCAGTTTTACAGTTTGCAAGTTTA 59.847 34.615 0.00 0.00 0.00 2.01
160 161 6.814146 CCCAGTTTTACAGTTTGCAAGTTTAA 59.186 34.615 0.00 0.00 0.00 1.52
161 162 7.332182 CCCAGTTTTACAGTTTGCAAGTTTAAA 59.668 33.333 0.00 0.00 0.00 1.52
162 163 8.379902 CCAGTTTTACAGTTTGCAAGTTTAAAG 58.620 33.333 0.00 0.00 0.00 1.85
163 164 8.379902 CAGTTTTACAGTTTGCAAGTTTAAAGG 58.620 33.333 0.00 0.00 0.00 3.11
164 165 7.547722 AGTTTTACAGTTTGCAAGTTTAAAGGG 59.452 33.333 0.00 0.00 0.00 3.95
165 166 6.532988 TTACAGTTTGCAAGTTTAAAGGGT 57.467 33.333 0.00 0.00 0.00 4.34
166 167 7.642082 TTACAGTTTGCAAGTTTAAAGGGTA 57.358 32.000 0.00 0.00 0.00 3.69
167 168 6.724893 ACAGTTTGCAAGTTTAAAGGGTAT 57.275 33.333 0.00 0.00 0.00 2.73
168 169 6.512297 ACAGTTTGCAAGTTTAAAGGGTATG 58.488 36.000 0.00 0.00 0.00 2.39
169 170 5.405269 CAGTTTGCAAGTTTAAAGGGTATGC 59.595 40.000 0.00 0.00 0.00 3.14
170 171 5.304357 AGTTTGCAAGTTTAAAGGGTATGCT 59.696 36.000 0.00 0.00 33.66 3.79
171 172 6.492087 AGTTTGCAAGTTTAAAGGGTATGCTA 59.508 34.615 0.00 3.09 33.66 3.49
172 173 6.509418 TTGCAAGTTTAAAGGGTATGCTAG 57.491 37.500 0.00 0.00 33.66 3.42
173 174 5.811190 TGCAAGTTTAAAGGGTATGCTAGA 58.189 37.500 0.00 0.00 33.66 2.43
174 175 5.880332 TGCAAGTTTAAAGGGTATGCTAGAG 59.120 40.000 0.00 0.00 33.66 2.43
175 176 6.113411 GCAAGTTTAAAGGGTATGCTAGAGA 58.887 40.000 0.00 0.00 0.00 3.10
176 177 6.768381 GCAAGTTTAAAGGGTATGCTAGAGAT 59.232 38.462 0.00 0.00 0.00 2.75
177 178 7.254932 GCAAGTTTAAAGGGTATGCTAGAGATG 60.255 40.741 0.00 0.00 0.00 2.90
178 179 6.292150 AGTTTAAAGGGTATGCTAGAGATGC 58.708 40.000 0.00 0.00 0.00 3.91
179 180 6.100424 AGTTTAAAGGGTATGCTAGAGATGCT 59.900 38.462 0.00 0.00 0.00 3.79
180 181 6.500589 TTAAAGGGTATGCTAGAGATGCTT 57.499 37.500 0.00 0.00 0.00 3.91
181 182 5.379706 AAAGGGTATGCTAGAGATGCTTT 57.620 39.130 0.00 0.00 0.00 3.51
182 183 5.379706 AAGGGTATGCTAGAGATGCTTTT 57.620 39.130 0.00 0.00 0.00 2.27
183 184 6.500589 AAGGGTATGCTAGAGATGCTTTTA 57.499 37.500 0.00 0.00 0.00 1.52
184 185 6.107901 AGGGTATGCTAGAGATGCTTTTAG 57.892 41.667 0.00 0.00 0.00 1.85
185 186 5.604650 AGGGTATGCTAGAGATGCTTTTAGT 59.395 40.000 0.00 0.00 0.00 2.24
186 187 6.782988 AGGGTATGCTAGAGATGCTTTTAGTA 59.217 38.462 0.00 0.00 0.00 1.82
187 188 7.039363 AGGGTATGCTAGAGATGCTTTTAGTAG 60.039 40.741 0.00 0.00 0.00 2.57
188 189 7.093992 GGTATGCTAGAGATGCTTTTAGTAGG 58.906 42.308 0.00 0.00 0.00 3.18
189 190 6.985653 ATGCTAGAGATGCTTTTAGTAGGA 57.014 37.500 0.00 0.00 0.00 2.94
190 191 6.791867 TGCTAGAGATGCTTTTAGTAGGAA 57.208 37.500 0.00 0.00 0.00 3.36
191 192 6.574350 TGCTAGAGATGCTTTTAGTAGGAAC 58.426 40.000 0.00 0.00 0.00 3.62
192 193 5.986741 GCTAGAGATGCTTTTAGTAGGAACC 59.013 44.000 0.00 0.00 0.00 3.62
193 194 6.407074 GCTAGAGATGCTTTTAGTAGGAACCA 60.407 42.308 0.00 0.00 0.00 3.67
194 195 5.983540 AGAGATGCTTTTAGTAGGAACCAG 58.016 41.667 0.00 0.00 0.00 4.00
195 196 5.721960 AGAGATGCTTTTAGTAGGAACCAGA 59.278 40.000 0.00 0.00 0.00 3.86
196 197 6.213600 AGAGATGCTTTTAGTAGGAACCAGAA 59.786 38.462 0.00 0.00 0.00 3.02
197 198 6.174049 AGATGCTTTTAGTAGGAACCAGAAC 58.826 40.000 0.00 0.00 0.00 3.01
198 199 4.648651 TGCTTTTAGTAGGAACCAGAACC 58.351 43.478 0.00 0.00 0.00 3.62
199 200 4.008330 GCTTTTAGTAGGAACCAGAACCC 58.992 47.826 0.00 0.00 0.00 4.11
200 201 4.263374 GCTTTTAGTAGGAACCAGAACCCT 60.263 45.833 0.00 0.00 0.00 4.34
201 202 4.903045 TTTAGTAGGAACCAGAACCCTG 57.097 45.455 0.00 0.00 40.09 4.45
202 203 2.417719 AGTAGGAACCAGAACCCTGT 57.582 50.000 0.00 0.00 38.74 4.00
203 204 2.702748 AGTAGGAACCAGAACCCTGTT 58.297 47.619 0.00 0.00 38.74 3.16
204 205 3.053826 AGTAGGAACCAGAACCCTGTTT 58.946 45.455 0.00 0.00 38.74 2.83
205 206 2.658807 AGGAACCAGAACCCTGTTTC 57.341 50.000 0.00 0.00 40.01 2.78
206 207 2.136026 AGGAACCAGAACCCTGTTTCT 58.864 47.619 0.00 0.00 40.41 2.52
207 208 3.323775 AGGAACCAGAACCCTGTTTCTA 58.676 45.455 0.00 0.00 40.41 2.10
208 209 3.916989 AGGAACCAGAACCCTGTTTCTAT 59.083 43.478 0.00 0.00 40.41 1.98
209 210 4.354087 AGGAACCAGAACCCTGTTTCTATT 59.646 41.667 0.00 0.00 40.41 1.73
210 211 5.077564 GGAACCAGAACCCTGTTTCTATTT 58.922 41.667 0.00 0.00 40.41 1.40
258 259 3.058160 GGCTGTGTGGCTGCGATT 61.058 61.111 0.00 0.00 42.12 3.34
278 279 2.825836 GGCCTGCGGATGTTCCTG 60.826 66.667 0.00 0.00 33.30 3.86
285 286 0.238289 GCGGATGTTCCTGTGTTGTG 59.762 55.000 0.00 0.00 33.30 3.33
286 287 1.593196 CGGATGTTCCTGTGTTGTGT 58.407 50.000 0.00 0.00 33.30 3.72
287 288 2.761559 CGGATGTTCCTGTGTTGTGTA 58.238 47.619 0.00 0.00 33.30 2.90
288 289 2.736721 CGGATGTTCCTGTGTTGTGTAG 59.263 50.000 0.00 0.00 33.30 2.74
289 290 3.074412 GGATGTTCCTGTGTTGTGTAGG 58.926 50.000 0.00 0.00 32.53 3.18
290 291 3.244422 GGATGTTCCTGTGTTGTGTAGGA 60.244 47.826 0.00 0.00 38.78 2.94
291 292 3.916359 TGTTCCTGTGTTGTGTAGGAA 57.084 42.857 0.00 0.00 45.64 3.36
293 294 2.519377 TCCTGTGTTGTGTAGGAACG 57.481 50.000 0.00 0.00 37.66 3.95
294 295 2.033372 TCCTGTGTTGTGTAGGAACGA 58.967 47.619 0.00 0.00 37.66 3.85
295 296 2.631062 TCCTGTGTTGTGTAGGAACGAT 59.369 45.455 0.00 0.00 37.66 3.73
296 297 2.993899 CCTGTGTTGTGTAGGAACGATC 59.006 50.000 0.00 0.00 33.33 3.69
297 298 3.306088 CCTGTGTTGTGTAGGAACGATCT 60.306 47.826 0.00 0.00 33.33 2.75
298 299 4.307432 CTGTGTTGTGTAGGAACGATCTT 58.693 43.478 0.00 0.00 0.00 2.40
299 300 4.055360 TGTGTTGTGTAGGAACGATCTTG 58.945 43.478 0.00 0.00 0.00 3.02
300 301 4.056050 GTGTTGTGTAGGAACGATCTTGT 58.944 43.478 0.00 0.00 0.00 3.16
301 302 5.221283 TGTGTTGTGTAGGAACGATCTTGTA 60.221 40.000 0.00 0.00 0.00 2.41
302 303 5.693104 GTGTTGTGTAGGAACGATCTTGTAA 59.307 40.000 0.00 0.00 0.00 2.41
312 313 5.875359 GGAACGATCTTGTAATTCCTTGAGT 59.125 40.000 0.00 0.00 36.65 3.41
323 324 9.753674 TTGTAATTCCTTGAGTAATGAAATCCT 57.246 29.630 0.00 0.00 0.00 3.24
399 400 8.978539 GGAAAACATCCTACATTTCTGAAAAAC 58.021 33.333 6.95 0.00 45.56 2.43
400 401 9.750125 GAAAACATCCTACATTTCTGAAAAACT 57.250 29.630 6.95 0.00 0.00 2.66
422 424 8.429237 AACTAAATATGTTTTGGAATGTCCCA 57.571 30.769 0.00 0.00 35.03 4.37
463 465 8.483758 TGTTATAGTAGGAAAAGACATTCTCCC 58.516 37.037 0.00 0.00 0.00 4.30
464 466 8.483758 GTTATAGTAGGAAAAGACATTCTCCCA 58.516 37.037 0.00 0.00 0.00 4.37
465 467 7.698163 ATAGTAGGAAAAGACATTCTCCCAT 57.302 36.000 0.00 0.00 0.00 4.00
466 468 5.749462 AGTAGGAAAAGACATTCTCCCATG 58.251 41.667 0.00 0.00 0.00 3.66
467 469 3.359950 AGGAAAAGACATTCTCCCATGC 58.640 45.455 0.00 0.00 0.00 4.06
468 470 3.091545 GGAAAAGACATTCTCCCATGCA 58.908 45.455 0.00 0.00 0.00 3.96
469 471 3.703052 GGAAAAGACATTCTCCCATGCAT 59.297 43.478 0.00 0.00 0.00 3.96
527 529 4.159321 TCACTCTCTTTGAGATTCGCATCT 59.841 41.667 0.00 0.00 45.39 2.90
599 601 4.823989 CCTGTCAATCAGTCACCTTTTCTT 59.176 41.667 0.00 0.00 42.19 2.52
851 887 3.890756 TGGTGAGACCTTACGAAACTGTA 59.109 43.478 0.00 0.00 39.58 2.74
1154 1596 0.304705 GCTGACACACAAACTGACCG 59.695 55.000 0.00 0.00 0.00 4.79
1163 1605 2.285220 CACAAACTGACCGTCTGACAAG 59.715 50.000 11.98 0.93 0.00 3.16
1191 1633 4.335874 AGACGTACAGCAGGTGATTAGTAG 59.664 45.833 6.61 0.00 0.00 2.57
1192 1634 4.015084 ACGTACAGCAGGTGATTAGTAGT 58.985 43.478 6.61 0.00 0.00 2.73
1193 1635 5.188434 ACGTACAGCAGGTGATTAGTAGTA 58.812 41.667 6.61 0.00 0.00 1.82
1397 1851 8.582657 AGCTTCTGTATATATGAACCGTATCT 57.417 34.615 0.00 0.00 0.00 1.98
1482 1936 4.846940 AGGACAAGGACTAGAACAAGGAAT 59.153 41.667 0.00 0.00 0.00 3.01
1501 1956 5.539955 AGGAATTGTGCAGAACCTTTAACAT 59.460 36.000 0.00 0.00 0.00 2.71
1588 2043 1.890894 CCATGTCGTCGAGGAGGTT 59.109 57.895 8.30 0.00 0.00 3.50
1696 2151 2.882643 GCGGTCCCCAAAAACCTTATCT 60.883 50.000 0.00 0.00 33.14 1.98
1730 2185 0.250338 AGGACTCAAAAGGTGCGGTC 60.250 55.000 0.00 0.00 0.00 4.79
1794 2249 1.653151 GATGGGGAAGAACGTAGCAC 58.347 55.000 0.00 0.00 0.00 4.40
1937 2393 0.608640 AAGCAACGAAGGGAGACGAT 59.391 50.000 0.00 0.00 0.00 3.73
1997 2454 5.353394 TTCAGTGTCCACTACAGAAAACT 57.647 39.130 0.00 0.00 40.20 2.66
2019 2476 0.391597 TCAACTCCCACGTGACCTTC 59.608 55.000 19.30 0.00 0.00 3.46
2062 2519 5.049680 GGCAAAAATTTAGATATCGGCTCGA 60.050 40.000 0.00 0.00 41.13 4.04
2069 2526 9.653287 AAATTTAGATATCGGCTCGATTCATTA 57.347 29.630 13.95 0.00 44.59 1.90
2210 2687 4.286032 ACTCCCACTAAACTAGCAATGTGA 59.714 41.667 7.74 0.00 0.00 3.58
2261 2739 0.409484 ACAAATGGGCTAAGTGGGCT 59.591 50.000 0.00 0.00 0.00 5.19
2266 2744 1.663911 TGGGCTAAGTGGGCTTCTAA 58.336 50.000 0.00 0.00 36.22 2.10
2323 2801 7.119387 AGCTACCCAAAATAGCAAAATAGACT 58.881 34.615 6.77 0.00 46.27 3.24
2334 2812 8.752005 ATAGCAAAATAGACTAAATTCCAGCA 57.248 30.769 0.00 0.00 0.00 4.41
2335 2813 7.466746 AGCAAAATAGACTAAATTCCAGCAA 57.533 32.000 0.00 0.00 0.00 3.91
2336 2814 7.895759 AGCAAAATAGACTAAATTCCAGCAAA 58.104 30.769 0.00 0.00 0.00 3.68
2337 2815 8.367156 AGCAAAATAGACTAAATTCCAGCAAAA 58.633 29.630 0.00 0.00 0.00 2.44
2338 2816 9.154847 GCAAAATAGACTAAATTCCAGCAAAAT 57.845 29.630 0.00 0.00 0.00 1.82
2340 2818 8.707938 AAATAGACTAAATTCCAGCAAAATGC 57.292 30.769 0.00 0.00 45.46 3.56
2381 2859 8.988060 TGTTGATCAGTTTCCTTCCATATACTA 58.012 33.333 0.00 0.00 0.00 1.82
2480 2966 1.122632 TCGCACACCAAGGTTCCCTA 61.123 55.000 0.00 0.00 31.13 3.53
2481 2967 0.035439 CGCACACCAAGGTTCCCTAT 60.035 55.000 0.00 0.00 31.13 2.57
2799 3294 2.893398 GTCGATCAACTCGGCCCT 59.107 61.111 0.00 0.00 46.29 5.19
2817 3312 3.285215 GCCGATCGCCTCTCCGTA 61.285 66.667 10.32 0.00 0.00 4.02
3009 3507 1.953138 CGTCGCCAGCATGATCCTC 60.953 63.158 0.00 0.00 39.69 3.71
3073 3664 3.628646 ATGGACCTTGTGCCGCCTC 62.629 63.158 0.00 0.00 0.00 4.70
3486 4077 1.078426 GGTGACCTGCGGCTACAAT 60.078 57.895 0.00 0.00 0.00 2.71
3819 4695 2.034532 TACCAGCAGACGGGTCGA 59.965 61.111 0.00 0.00 40.81 4.20
4035 4920 5.295540 GCAAGACCTGACAGAGGATTAATTC 59.704 44.000 3.32 0.00 46.33 2.17
4036 4921 6.409704 CAAGACCTGACAGAGGATTAATTCA 58.590 40.000 3.32 0.00 46.33 2.57
4038 4923 7.921041 AGACCTGACAGAGGATTAATTCATA 57.079 36.000 3.32 0.00 46.33 2.15
4039 4924 8.324191 AGACCTGACAGAGGATTAATTCATAA 57.676 34.615 3.32 0.00 46.33 1.90
4040 4925 8.943085 AGACCTGACAGAGGATTAATTCATAAT 58.057 33.333 3.32 0.00 46.33 1.28
4096 5095 6.512091 GCATGTTGTTCACAAATGCAAGAAAT 60.512 34.615 21.86 0.00 42.67 2.17
4098 5097 7.375106 TGTTGTTCACAAATGCAAGAAATTT 57.625 28.000 0.00 0.00 37.63 1.82
4309 5322 4.997395 TCACAAAGACTCAGAAGCATTACC 59.003 41.667 0.00 0.00 0.00 2.85
4479 5498 4.679197 TCTTTTGAATCGGCAAACAATTCG 59.321 37.500 0.00 0.00 37.48 3.34
4518 5545 7.692908 TTTCATTCGAAATTGGTGTTCTTTC 57.307 32.000 0.00 0.00 36.19 2.62
4526 5553 8.625651 TCGAAATTGGTGTTCTTTCTAATTCAA 58.374 29.630 0.00 0.00 0.00 2.69
4561 5609 3.559238 ATGCATGAACACTTTTCGGAC 57.441 42.857 0.00 0.00 0.00 4.79
4571 5619 2.096248 ACTTTTCGGACCAGCAAACAA 58.904 42.857 0.00 0.00 0.00 2.83
4651 5699 1.658994 GTCCACAAAAGTCACGTCCA 58.341 50.000 0.00 0.00 0.00 4.02
4659 5707 4.636648 ACAAAAGTCACGTCCACACATTAA 59.363 37.500 0.00 0.00 0.00 1.40
4662 5710 6.385649 AAAGTCACGTCCACACATTAATTT 57.614 33.333 0.00 0.00 0.00 1.82
4710 5758 5.644206 AGAAAAAGGTAGATCTTTCTTCCGC 59.356 40.000 0.00 0.00 42.61 5.54
4712 5760 2.467880 AGGTAGATCTTTCTTCCGCCA 58.532 47.619 0.00 0.00 42.61 5.69
4719 5767 1.156736 CTTTCTTCCGCCATCGTGTT 58.843 50.000 0.00 0.00 0.00 3.32
4727 5775 1.447140 GCCATCGTGTTCGCCTACA 60.447 57.895 0.00 0.00 36.96 2.74
4734 5782 1.425412 GTGTTCGCCTACAATGTCGT 58.575 50.000 0.00 0.00 0.00 4.34
4752 5800 0.249073 GTCGTCCTCGTCATCCATGG 60.249 60.000 4.97 4.97 38.33 3.66
4756 5804 1.207089 GTCCTCGTCATCCATGGTGAA 59.793 52.381 12.58 0.00 0.00 3.18
4757 5805 2.118679 TCCTCGTCATCCATGGTGAAT 58.881 47.619 12.58 0.00 0.00 2.57
4759 5807 2.487934 CTCGTCATCCATGGTGAATCC 58.512 52.381 12.58 3.05 0.00 3.01
4764 5812 2.439135 TCATCCATGGTGAATCCGATGT 59.561 45.455 12.58 0.00 39.52 3.06
4765 5813 3.645687 TCATCCATGGTGAATCCGATGTA 59.354 43.478 12.58 0.00 39.52 2.29
4766 5814 3.751479 TCCATGGTGAATCCGATGTAG 57.249 47.619 12.58 0.00 39.52 2.74
4767 5815 2.368548 TCCATGGTGAATCCGATGTAGG 59.631 50.000 12.58 0.00 39.52 3.18
4768 5816 2.550855 CCATGGTGAATCCGATGTAGGG 60.551 54.545 2.57 0.00 39.52 3.53
4769 5817 0.468226 TGGTGAATCCGATGTAGGGC 59.532 55.000 0.00 0.00 39.52 5.19
4770 5818 0.468226 GGTGAATCCGATGTAGGGCA 59.532 55.000 0.00 0.00 0.00 5.36
4982 6130 1.109323 GGGCAGGATGTAATGGTGGC 61.109 60.000 0.00 0.00 39.31 5.01
5067 6215 3.727726 CATAGCATTGTGGTCGTCCATA 58.272 45.455 4.29 0.00 46.20 2.74
5089 6237 0.534203 CACAACTGCCCGTACAAGGT 60.534 55.000 0.00 0.00 0.00 3.50
5093 6241 1.005394 CTGCCCGTACAAGGTCGTT 60.005 57.895 0.00 0.00 0.00 3.85
5149 6297 1.001406 CTCCTCCTTCACGTCAAGCTT 59.999 52.381 0.00 0.00 0.00 3.74
5165 6313 2.481441 AGCTTGGGGACATAGACATCA 58.519 47.619 0.00 0.00 42.32 3.07
5195 6343 2.739932 CGACAACACCATCATCTCCTCC 60.740 54.545 0.00 0.00 0.00 4.30
5267 6415 1.402968 CATCTTGAAATCCACCAGCCG 59.597 52.381 0.00 0.00 0.00 5.52
5275 6423 4.785453 CCACCAGCCGCTTCCTCC 62.785 72.222 0.00 0.00 0.00 4.30
5327 6491 2.432972 GAAGGGCGTCGGCGTTAA 60.433 61.111 24.07 0.00 41.24 2.01
5375 6539 3.030308 CGCACGCGACTCACAGTT 61.030 61.111 15.93 0.00 42.83 3.16
5376 6540 2.546321 GCACGCGACTCACAGTTG 59.454 61.111 15.93 0.00 32.67 3.16
5377 6541 1.949133 GCACGCGACTCACAGTTGA 60.949 57.895 15.93 0.00 31.05 3.18
5378 6542 1.284982 GCACGCGACTCACAGTTGAT 61.285 55.000 15.93 0.00 31.05 2.57
5379 6543 0.710567 CACGCGACTCACAGTTGATC 59.289 55.000 15.93 0.00 31.05 2.92
5380 6544 0.598562 ACGCGACTCACAGTTGATCT 59.401 50.000 15.93 0.00 31.05 2.75
5381 6545 1.263776 CGCGACTCACAGTTGATCTC 58.736 55.000 0.00 0.00 31.05 2.75
5382 6546 1.135546 CGCGACTCACAGTTGATCTCT 60.136 52.381 0.00 0.00 31.05 3.10
5383 6547 2.096013 CGCGACTCACAGTTGATCTCTA 59.904 50.000 0.00 0.00 31.05 2.43
5384 6548 3.430931 GCGACTCACAGTTGATCTCTAC 58.569 50.000 0.00 0.00 31.05 2.59
5385 6549 3.675481 CGACTCACAGTTGATCTCTACG 58.325 50.000 0.00 0.00 31.05 3.51
5386 6550 3.371285 CGACTCACAGTTGATCTCTACGA 59.629 47.826 0.00 0.00 31.05 3.43
5387 6551 4.493382 CGACTCACAGTTGATCTCTACGAG 60.493 50.000 0.00 4.94 31.05 4.18
5388 6552 3.692101 ACTCACAGTTGATCTCTACGAGG 59.308 47.826 0.00 0.00 0.00 4.63
5389 6553 2.423892 TCACAGTTGATCTCTACGAGGC 59.576 50.000 0.00 0.00 0.00 4.70
5390 6554 1.402259 ACAGTTGATCTCTACGAGGCG 59.598 52.381 0.00 0.00 0.00 5.52
5391 6555 1.025812 AGTTGATCTCTACGAGGCGG 58.974 55.000 0.00 0.00 0.00 6.13
5392 6556 0.030908 GTTGATCTCTACGAGGCGGG 59.969 60.000 0.00 0.00 0.00 6.13
5393 6557 0.395311 TTGATCTCTACGAGGCGGGT 60.395 55.000 0.00 0.00 0.00 5.28
5394 6558 1.101635 TGATCTCTACGAGGCGGGTG 61.102 60.000 0.00 0.00 0.00 4.61
5395 6559 2.409241 GATCTCTACGAGGCGGGTGC 62.409 65.000 0.00 0.00 41.71 5.01
5396 6560 4.554363 CTCTACGAGGCGGGTGCG 62.554 72.222 0.00 0.00 44.10 5.34
5418 6582 3.677527 GTCTCCGGGACAACGAGA 58.322 61.111 15.65 0.78 43.94 4.04
5419 6583 1.962144 GTCTCCGGGACAACGAGAA 59.038 57.895 15.65 0.00 43.94 2.87
5420 6584 0.531200 GTCTCCGGGACAACGAGAAT 59.469 55.000 15.65 0.00 43.94 2.40
5421 6585 0.815734 TCTCCGGGACAACGAGAATC 59.184 55.000 0.00 0.00 35.47 2.52
5434 6598 1.863267 GAGAATCGGCACCTGATCTG 58.137 55.000 0.00 0.00 0.00 2.90
5435 6599 0.467384 AGAATCGGCACCTGATCTGG 59.533 55.000 16.56 16.56 0.00 3.86
5436 6600 0.533755 GAATCGGCACCTGATCTGGG 60.534 60.000 21.40 12.67 0.00 4.45
5437 6601 2.615227 AATCGGCACCTGATCTGGGC 62.615 60.000 21.40 19.44 0.00 5.36
5438 6602 3.790437 CGGCACCTGATCTGGGCT 61.790 66.667 21.40 0.00 0.00 5.19
5439 6603 2.191641 GGCACCTGATCTGGGCTC 59.808 66.667 21.40 10.18 0.00 4.70
5440 6604 2.673200 GGCACCTGATCTGGGCTCA 61.673 63.158 21.40 0.00 0.00 4.26
5441 6605 1.153208 GCACCTGATCTGGGCTCAG 60.153 63.158 21.40 7.48 42.21 3.35
5453 6617 4.672251 GCTCAGATGCCACCCATT 57.328 55.556 0.00 0.00 33.29 3.16
5454 6618 2.112898 GCTCAGATGCCACCCATTG 58.887 57.895 0.00 0.00 33.29 2.82
5466 6630 3.671410 CCATTGGGGAGGTGGGCA 61.671 66.667 0.00 0.00 40.01 5.36
5467 6631 2.691732 CATTGGGGAGGTGGGCAT 59.308 61.111 0.00 0.00 0.00 4.40
5468 6632 1.654137 CCATTGGGGAGGTGGGCATA 61.654 60.000 0.00 0.00 40.01 3.14
5469 6633 0.178981 CATTGGGGAGGTGGGCATAG 60.179 60.000 0.00 0.00 0.00 2.23
5470 6634 0.328450 ATTGGGGAGGTGGGCATAGA 60.328 55.000 0.00 0.00 0.00 1.98
5471 6635 0.328450 TTGGGGAGGTGGGCATAGAT 60.328 55.000 0.00 0.00 0.00 1.98
5472 6636 0.328450 TGGGGAGGTGGGCATAGATT 60.328 55.000 0.00 0.00 0.00 2.40
5473 6637 0.402121 GGGGAGGTGGGCATAGATTC 59.598 60.000 0.00 0.00 0.00 2.52
5474 6638 1.439543 GGGAGGTGGGCATAGATTCT 58.560 55.000 0.00 0.00 0.00 2.40
5475 6639 2.621070 GGGAGGTGGGCATAGATTCTA 58.379 52.381 0.00 0.00 0.00 2.10
5476 6640 2.979678 GGGAGGTGGGCATAGATTCTAA 59.020 50.000 0.00 0.00 0.00 2.10
5477 6641 3.008485 GGGAGGTGGGCATAGATTCTAAG 59.992 52.174 0.00 0.00 0.00 2.18
5478 6642 3.008485 GGAGGTGGGCATAGATTCTAAGG 59.992 52.174 0.00 0.00 0.00 2.69
5479 6643 3.904339 GAGGTGGGCATAGATTCTAAGGA 59.096 47.826 0.00 0.00 0.00 3.36
5480 6644 4.507342 AGGTGGGCATAGATTCTAAGGAT 58.493 43.478 0.00 0.00 0.00 3.24
5481 6645 4.916424 AGGTGGGCATAGATTCTAAGGATT 59.084 41.667 0.00 0.00 0.00 3.01
5482 6646 6.091555 AGGTGGGCATAGATTCTAAGGATTA 58.908 40.000 0.00 0.00 0.00 1.75
5483 6647 6.013293 AGGTGGGCATAGATTCTAAGGATTAC 60.013 42.308 0.00 0.00 0.00 1.89
5484 6648 6.239887 GGTGGGCATAGATTCTAAGGATTACA 60.240 42.308 0.00 0.00 0.00 2.41
5485 6649 6.651225 GTGGGCATAGATTCTAAGGATTACAC 59.349 42.308 0.00 0.00 0.00 2.90
5486 6650 6.558775 TGGGCATAGATTCTAAGGATTACACT 59.441 38.462 0.00 0.00 0.00 3.55
5487 6651 7.100409 GGGCATAGATTCTAAGGATTACACTC 58.900 42.308 0.00 0.00 0.00 3.51
5488 6652 7.100409 GGCATAGATTCTAAGGATTACACTCC 58.900 42.308 0.00 0.00 35.37 3.85
5489 6653 7.256332 GGCATAGATTCTAAGGATTACACTCCA 60.256 40.741 0.00 0.00 37.81 3.86
5490 6654 8.317679 GCATAGATTCTAAGGATTACACTCCAT 58.682 37.037 0.00 0.00 37.81 3.41
5491 6655 9.868277 CATAGATTCTAAGGATTACACTCCATC 57.132 37.037 0.00 0.00 37.81 3.51
5492 6656 6.987386 AGATTCTAAGGATTACACTCCATCG 58.013 40.000 0.00 0.00 37.81 3.84
5493 6657 6.551601 AGATTCTAAGGATTACACTCCATCGT 59.448 38.462 0.00 0.00 37.81 3.73
5494 6658 6.540438 TTCTAAGGATTACACTCCATCGTT 57.460 37.500 0.00 0.00 37.81 3.85
5495 6659 6.540438 TCTAAGGATTACACTCCATCGTTT 57.460 37.500 0.00 0.00 37.81 3.60
5496 6660 6.942976 TCTAAGGATTACACTCCATCGTTTT 58.057 36.000 0.00 0.00 37.81 2.43
5497 6661 8.070034 TCTAAGGATTACACTCCATCGTTTTA 57.930 34.615 0.00 0.00 37.81 1.52
5498 6662 6.980051 AAGGATTACACTCCATCGTTTTAC 57.020 37.500 0.00 0.00 37.81 2.01
5499 6663 6.045072 AGGATTACACTCCATCGTTTTACA 57.955 37.500 0.00 0.00 37.81 2.41
5500 6664 6.106673 AGGATTACACTCCATCGTTTTACAG 58.893 40.000 0.00 0.00 37.81 2.74
5501 6665 6.070995 AGGATTACACTCCATCGTTTTACAGA 60.071 38.462 0.00 0.00 37.81 3.41
5502 6666 6.255887 GGATTACACTCCATCGTTTTACAGAG 59.744 42.308 0.00 0.00 35.24 3.35
5503 6667 3.926616 ACACTCCATCGTTTTACAGAGG 58.073 45.455 0.00 0.00 0.00 3.69
5504 6668 3.323979 ACACTCCATCGTTTTACAGAGGT 59.676 43.478 0.00 0.00 0.00 3.85
5505 6669 4.525487 ACACTCCATCGTTTTACAGAGGTA 59.475 41.667 0.00 0.00 0.00 3.08
5506 6670 5.011329 ACACTCCATCGTTTTACAGAGGTAA 59.989 40.000 0.00 0.00 37.70 2.85
5507 6671 6.106673 CACTCCATCGTTTTACAGAGGTAAT 58.893 40.000 0.00 0.00 39.15 1.89
5508 6672 6.255887 CACTCCATCGTTTTACAGAGGTAATC 59.744 42.308 0.00 0.00 39.15 1.75
5509 6673 6.070995 ACTCCATCGTTTTACAGAGGTAATCA 60.071 38.462 0.00 0.00 39.15 2.57
5510 6674 6.338146 TCCATCGTTTTACAGAGGTAATCAG 58.662 40.000 0.00 0.00 39.15 2.90
5511 6675 5.006746 CCATCGTTTTACAGAGGTAATCAGC 59.993 44.000 0.00 0.00 39.15 4.26
5512 6676 5.142061 TCGTTTTACAGAGGTAATCAGCA 57.858 39.130 0.00 0.00 39.15 4.41
5513 6677 5.543714 TCGTTTTACAGAGGTAATCAGCAA 58.456 37.500 0.00 0.00 39.15 3.91
5514 6678 6.170506 TCGTTTTACAGAGGTAATCAGCAAT 58.829 36.000 0.00 0.00 39.15 3.56
5515 6679 7.324935 TCGTTTTACAGAGGTAATCAGCAATA 58.675 34.615 0.00 0.00 39.15 1.90
5516 6680 7.985184 TCGTTTTACAGAGGTAATCAGCAATAT 59.015 33.333 0.00 0.00 39.15 1.28
5517 6681 9.256477 CGTTTTACAGAGGTAATCAGCAATATA 57.744 33.333 0.00 0.00 39.15 0.86
5523 6687 8.043710 ACAGAGGTAATCAGCAATATATTAGCC 58.956 37.037 13.08 0.93 35.29 3.93
5524 6688 8.043113 CAGAGGTAATCAGCAATATATTAGCCA 58.957 37.037 13.08 4.83 35.29 4.75
5525 6689 8.605947 AGAGGTAATCAGCAATATATTAGCCAA 58.394 33.333 13.08 5.73 35.29 4.52
5526 6690 8.567285 AGGTAATCAGCAATATATTAGCCAAC 57.433 34.615 13.08 7.25 35.29 3.77
5527 6691 8.386264 AGGTAATCAGCAATATATTAGCCAACT 58.614 33.333 13.08 3.76 35.29 3.16
5528 6692 9.014297 GGTAATCAGCAATATATTAGCCAACTT 57.986 33.333 13.08 7.46 30.86 2.66
5530 6694 7.693969 ATCAGCAATATATTAGCCAACTTCC 57.306 36.000 13.08 0.00 0.00 3.46
5531 6695 5.700832 TCAGCAATATATTAGCCAACTTCCG 59.299 40.000 13.08 0.00 0.00 4.30
5532 6696 5.700832 CAGCAATATATTAGCCAACTTCCGA 59.299 40.000 13.08 0.00 0.00 4.55
5533 6697 5.701290 AGCAATATATTAGCCAACTTCCGAC 59.299 40.000 13.08 0.00 0.00 4.79
5534 6698 5.468746 GCAATATATTAGCCAACTTCCGACA 59.531 40.000 0.00 0.00 0.00 4.35
5535 6699 6.017440 GCAATATATTAGCCAACTTCCGACAA 60.017 38.462 0.00 0.00 0.00 3.18
5536 6700 7.468084 GCAATATATTAGCCAACTTCCGACAAA 60.468 37.037 0.00 0.00 0.00 2.83
5537 6701 7.730364 ATATATTAGCCAACTTCCGACAAAG 57.270 36.000 0.00 0.00 0.00 2.77
5538 6702 3.478857 TTAGCCAACTTCCGACAAAGA 57.521 42.857 0.00 0.00 0.00 2.52
5539 6703 1.594331 AGCCAACTTCCGACAAAGAC 58.406 50.000 0.00 0.00 0.00 3.01
5540 6704 1.134220 AGCCAACTTCCGACAAAGACA 60.134 47.619 0.00 0.00 0.00 3.41
5541 6705 1.264288 GCCAACTTCCGACAAAGACAG 59.736 52.381 0.00 0.00 0.00 3.51
5542 6706 2.561569 CCAACTTCCGACAAAGACAGT 58.438 47.619 0.00 0.00 0.00 3.55
5543 6707 2.943033 CCAACTTCCGACAAAGACAGTT 59.057 45.455 0.00 0.00 0.00 3.16
5544 6708 3.002348 CCAACTTCCGACAAAGACAGTTC 59.998 47.826 0.00 0.00 0.00 3.01
5545 6709 3.536956 ACTTCCGACAAAGACAGTTCA 57.463 42.857 0.00 0.00 0.00 3.18
5546 6710 3.458189 ACTTCCGACAAAGACAGTTCAG 58.542 45.455 0.00 0.00 0.00 3.02
5547 6711 1.865865 TCCGACAAAGACAGTTCAGC 58.134 50.000 0.00 0.00 0.00 4.26
5548 6712 0.508641 CCGACAAAGACAGTTCAGCG 59.491 55.000 0.00 0.00 0.00 5.18
5549 6713 1.487482 CGACAAAGACAGTTCAGCGA 58.513 50.000 0.00 0.00 0.00 4.93
5550 6714 1.190323 CGACAAAGACAGTTCAGCGAC 59.810 52.381 0.00 0.00 0.00 5.19
5551 6715 2.474816 GACAAAGACAGTTCAGCGACT 58.525 47.619 0.00 0.00 0.00 4.18
5552 6716 2.866762 GACAAAGACAGTTCAGCGACTT 59.133 45.455 0.00 0.00 0.00 3.01
5553 6717 3.270877 ACAAAGACAGTTCAGCGACTTT 58.729 40.909 0.00 0.00 0.00 2.66
5554 6718 3.063997 ACAAAGACAGTTCAGCGACTTTG 59.936 43.478 0.00 0.00 45.06 2.77
5555 6719 1.221414 AGACAGTTCAGCGACTTTGC 58.779 50.000 0.00 0.00 0.00 3.68
5575 6739 1.155889 TGCATAGCAGGACAAACACG 58.844 50.000 0.00 0.00 33.32 4.49
5576 6740 0.447801 GCATAGCAGGACAAACACGG 59.552 55.000 0.00 0.00 0.00 4.94
5577 6741 0.447801 CATAGCAGGACAAACACGGC 59.552 55.000 0.00 0.00 0.00 5.68
5578 6742 0.036164 ATAGCAGGACAAACACGGCA 59.964 50.000 0.00 0.00 0.00 5.69
5579 6743 0.179043 TAGCAGGACAAACACGGCAA 60.179 50.000 0.00 0.00 0.00 4.52
5580 6744 1.299089 GCAGGACAAACACGGCAAC 60.299 57.895 0.00 0.00 0.00 4.17
5581 6745 1.999071 GCAGGACAAACACGGCAACA 61.999 55.000 0.00 0.00 0.00 3.33
5582 6746 0.453793 CAGGACAAACACGGCAACAA 59.546 50.000 0.00 0.00 0.00 2.83
5583 6747 0.454196 AGGACAAACACGGCAACAAC 59.546 50.000 0.00 0.00 0.00 3.32
5584 6748 0.171455 GGACAAACACGGCAACAACA 59.829 50.000 0.00 0.00 0.00 3.33
5585 6749 1.264672 GACAAACACGGCAACAACAC 58.735 50.000 0.00 0.00 0.00 3.32
5586 6750 0.455295 ACAAACACGGCAACAACACG 60.455 50.000 0.00 0.00 0.00 4.49
5587 6751 1.136872 CAAACACGGCAACAACACGG 61.137 55.000 0.00 0.00 0.00 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 4.394712 AGTTCCCTTCCGCAGCCG 62.395 66.667 0.00 0.00 0.00 5.52
17 18 2.747855 CAGTTCCCTTCCGCAGCC 60.748 66.667 0.00 0.00 0.00 4.85
18 19 2.747855 CCAGTTCCCTTCCGCAGC 60.748 66.667 0.00 0.00 0.00 5.25
19 20 0.674895 CTTCCAGTTCCCTTCCGCAG 60.675 60.000 0.00 0.00 0.00 5.18
20 21 1.125093 TCTTCCAGTTCCCTTCCGCA 61.125 55.000 0.00 0.00 0.00 5.69
21 22 0.036306 TTCTTCCAGTTCCCTTCCGC 59.964 55.000 0.00 0.00 0.00 5.54
22 23 1.339151 CCTTCTTCCAGTTCCCTTCCG 60.339 57.143 0.00 0.00 0.00 4.30
23 24 1.985895 TCCTTCTTCCAGTTCCCTTCC 59.014 52.381 0.00 0.00 0.00 3.46
24 25 2.616765 GCTCCTTCTTCCAGTTCCCTTC 60.617 54.545 0.00 0.00 0.00 3.46
25 26 1.352687 GCTCCTTCTTCCAGTTCCCTT 59.647 52.381 0.00 0.00 0.00 3.95
26 27 0.988063 GCTCCTTCTTCCAGTTCCCT 59.012 55.000 0.00 0.00 0.00 4.20
27 28 0.988063 AGCTCCTTCTTCCAGTTCCC 59.012 55.000 0.00 0.00 0.00 3.97
28 29 1.905894 AGAGCTCCTTCTTCCAGTTCC 59.094 52.381 10.93 0.00 0.00 3.62
29 30 3.694043 AAGAGCTCCTTCTTCCAGTTC 57.306 47.619 10.93 0.00 31.97 3.01
30 31 5.338789 GGATAAAGAGCTCCTTCTTCCAGTT 60.339 44.000 10.93 0.00 36.42 3.16
31 32 4.163268 GGATAAAGAGCTCCTTCTTCCAGT 59.837 45.833 10.93 0.00 36.42 4.00
32 33 4.408596 AGGATAAAGAGCTCCTTCTTCCAG 59.591 45.833 20.81 0.00 38.81 3.86
33 34 4.366267 AGGATAAAGAGCTCCTTCTTCCA 58.634 43.478 20.81 0.00 38.81 3.53
34 35 5.600898 ACTAGGATAAAGAGCTCCTTCTTCC 59.399 44.000 10.93 13.46 42.03 3.46
35 36 6.724893 ACTAGGATAAAGAGCTCCTTCTTC 57.275 41.667 10.93 4.86 42.03 2.87
36 37 7.503492 AAACTAGGATAAAGAGCTCCTTCTT 57.497 36.000 10.93 1.64 42.03 2.52
37 38 7.503492 AAAACTAGGATAAAGAGCTCCTTCT 57.497 36.000 10.93 0.00 42.03 2.85
38 39 8.258708 TGTAAAACTAGGATAAAGAGCTCCTTC 58.741 37.037 10.93 2.19 42.03 3.46
39 40 8.147244 TGTAAAACTAGGATAAAGAGCTCCTT 57.853 34.615 10.93 6.43 42.03 3.36
40 41 7.400627 ACTGTAAAACTAGGATAAAGAGCTCCT 59.599 37.037 10.93 2.19 44.18 3.69
41 42 7.557724 ACTGTAAAACTAGGATAAAGAGCTCC 58.442 38.462 10.93 0.00 0.00 4.70
42 43 9.438228 AAACTGTAAAACTAGGATAAAGAGCTC 57.562 33.333 5.27 5.27 0.00 4.09
43 44 9.220767 CAAACTGTAAAACTAGGATAAAGAGCT 57.779 33.333 0.00 0.00 0.00 4.09
44 45 9.000486 ACAAACTGTAAAACTAGGATAAAGAGC 58.000 33.333 0.00 0.00 0.00 4.09
62 63 8.736244 ACAAACAGACACTATAAAACAAACTGT 58.264 29.630 0.00 0.00 37.62 3.55
63 64 9.221775 GACAAACAGACACTATAAAACAAACTG 57.778 33.333 0.00 0.00 0.00 3.16
64 65 8.403236 GGACAAACAGACACTATAAAACAAACT 58.597 33.333 0.00 0.00 0.00 2.66
65 66 7.375017 CGGACAAACAGACACTATAAAACAAAC 59.625 37.037 0.00 0.00 0.00 2.93
66 67 7.411274 CGGACAAACAGACACTATAAAACAAA 58.589 34.615 0.00 0.00 0.00 2.83
67 68 6.512091 GCGGACAAACAGACACTATAAAACAA 60.512 38.462 0.00 0.00 0.00 2.83
68 69 5.049954 GCGGACAAACAGACACTATAAAACA 60.050 40.000 0.00 0.00 0.00 2.83
69 70 5.049954 TGCGGACAAACAGACACTATAAAAC 60.050 40.000 0.00 0.00 0.00 2.43
70 71 5.057819 TGCGGACAAACAGACACTATAAAA 58.942 37.500 0.00 0.00 0.00 1.52
71 72 4.633175 TGCGGACAAACAGACACTATAAA 58.367 39.130 0.00 0.00 0.00 1.40
72 73 4.242475 CTGCGGACAAACAGACACTATAA 58.758 43.478 0.00 0.00 35.90 0.98
73 74 3.845178 CTGCGGACAAACAGACACTATA 58.155 45.455 0.00 0.00 35.90 1.31
74 75 2.688507 CTGCGGACAAACAGACACTAT 58.311 47.619 0.00 0.00 35.90 2.12
75 76 1.872237 GCTGCGGACAAACAGACACTA 60.872 52.381 0.00 0.00 35.90 2.74
76 77 1.160329 GCTGCGGACAAACAGACACT 61.160 55.000 0.00 0.00 35.90 3.55
77 78 1.160329 AGCTGCGGACAAACAGACAC 61.160 55.000 0.00 0.00 35.90 3.67
78 79 0.391228 TAGCTGCGGACAAACAGACA 59.609 50.000 0.00 0.00 35.90 3.41
79 80 1.508632 TTAGCTGCGGACAAACAGAC 58.491 50.000 0.00 0.00 35.90 3.51
80 81 2.248280 TTTAGCTGCGGACAAACAGA 57.752 45.000 0.00 0.00 35.90 3.41
81 82 3.058293 TCATTTTAGCTGCGGACAAACAG 60.058 43.478 0.00 0.00 36.96 3.16
82 83 2.881513 TCATTTTAGCTGCGGACAAACA 59.118 40.909 0.00 0.00 0.00 2.83
83 84 3.552604 TCATTTTAGCTGCGGACAAAC 57.447 42.857 0.00 0.00 0.00 2.93
84 85 3.305064 GGTTCATTTTAGCTGCGGACAAA 60.305 43.478 0.00 0.00 0.00 2.83
85 86 2.227865 GGTTCATTTTAGCTGCGGACAA 59.772 45.455 0.00 0.00 0.00 3.18
86 87 1.810151 GGTTCATTTTAGCTGCGGACA 59.190 47.619 0.00 0.00 0.00 4.02
87 88 2.084546 AGGTTCATTTTAGCTGCGGAC 58.915 47.619 0.00 0.00 0.00 4.79
88 89 2.489938 AGGTTCATTTTAGCTGCGGA 57.510 45.000 0.00 0.00 0.00 5.54
89 90 3.575965 AAAGGTTCATTTTAGCTGCGG 57.424 42.857 0.00 0.00 0.00 5.69
90 91 7.915397 ACATATTAAAGGTTCATTTTAGCTGCG 59.085 33.333 0.00 0.00 0.00 5.18
130 131 5.133941 TGCAAACTGTAAAACTGGGATACA 58.866 37.500 0.00 0.00 39.74 2.29
131 132 5.699097 TGCAAACTGTAAAACTGGGATAC 57.301 39.130 0.00 0.00 0.00 2.24
132 133 5.830991 ACTTGCAAACTGTAAAACTGGGATA 59.169 36.000 0.00 0.00 0.00 2.59
133 134 4.649218 ACTTGCAAACTGTAAAACTGGGAT 59.351 37.500 0.00 0.00 0.00 3.85
134 135 4.020543 ACTTGCAAACTGTAAAACTGGGA 58.979 39.130 0.00 0.00 0.00 4.37
135 136 4.385358 ACTTGCAAACTGTAAAACTGGG 57.615 40.909 0.00 0.00 0.00 4.45
136 137 7.820044 TTAAACTTGCAAACTGTAAAACTGG 57.180 32.000 0.00 0.00 0.00 4.00
137 138 8.379902 CCTTTAAACTTGCAAACTGTAAAACTG 58.620 33.333 0.00 0.00 0.00 3.16
138 139 7.547722 CCCTTTAAACTTGCAAACTGTAAAACT 59.452 33.333 0.00 0.00 0.00 2.66
139 140 7.332430 ACCCTTTAAACTTGCAAACTGTAAAAC 59.668 33.333 0.00 0.00 0.00 2.43
140 141 7.387643 ACCCTTTAAACTTGCAAACTGTAAAA 58.612 30.769 0.00 0.03 0.00 1.52
141 142 6.937392 ACCCTTTAAACTTGCAAACTGTAAA 58.063 32.000 0.00 2.82 0.00 2.01
142 143 6.532988 ACCCTTTAAACTTGCAAACTGTAA 57.467 33.333 0.00 0.00 0.00 2.41
143 144 7.653647 CATACCCTTTAAACTTGCAAACTGTA 58.346 34.615 0.00 0.00 0.00 2.74
144 145 6.512297 CATACCCTTTAAACTTGCAAACTGT 58.488 36.000 0.00 0.00 0.00 3.55
145 146 5.405269 GCATACCCTTTAAACTTGCAAACTG 59.595 40.000 0.00 0.00 0.00 3.16
146 147 5.304357 AGCATACCCTTTAAACTTGCAAACT 59.696 36.000 0.00 0.00 0.00 2.66
147 148 5.538118 AGCATACCCTTTAAACTTGCAAAC 58.462 37.500 0.00 0.00 0.00 2.93
148 149 5.799827 AGCATACCCTTTAAACTTGCAAA 57.200 34.783 0.00 0.00 0.00 3.68
149 150 6.242396 TCTAGCATACCCTTTAAACTTGCAA 58.758 36.000 0.00 0.00 0.00 4.08
150 151 5.811190 TCTAGCATACCCTTTAAACTTGCA 58.189 37.500 0.00 0.00 0.00 4.08
151 152 6.113411 TCTCTAGCATACCCTTTAAACTTGC 58.887 40.000 0.00 0.00 0.00 4.01
152 153 7.254932 GCATCTCTAGCATACCCTTTAAACTTG 60.255 40.741 0.00 0.00 0.00 3.16
153 154 6.768381 GCATCTCTAGCATACCCTTTAAACTT 59.232 38.462 0.00 0.00 0.00 2.66
154 155 6.100424 AGCATCTCTAGCATACCCTTTAAACT 59.900 38.462 0.00 0.00 0.00 2.66
155 156 6.292150 AGCATCTCTAGCATACCCTTTAAAC 58.708 40.000 0.00 0.00 0.00 2.01
156 157 6.500589 AGCATCTCTAGCATACCCTTTAAA 57.499 37.500 0.00 0.00 0.00 1.52
157 158 6.500589 AAGCATCTCTAGCATACCCTTTAA 57.499 37.500 0.00 0.00 0.00 1.52
158 159 6.500589 AAAGCATCTCTAGCATACCCTTTA 57.499 37.500 0.00 0.00 0.00 1.85
159 160 5.379706 AAAGCATCTCTAGCATACCCTTT 57.620 39.130 0.00 0.00 0.00 3.11
160 161 5.379706 AAAAGCATCTCTAGCATACCCTT 57.620 39.130 0.00 0.00 0.00 3.95
161 162 5.604650 ACTAAAAGCATCTCTAGCATACCCT 59.395 40.000 0.00 0.00 0.00 4.34
162 163 5.859495 ACTAAAAGCATCTCTAGCATACCC 58.141 41.667 0.00 0.00 0.00 3.69
163 164 7.039644 TCCTACTAAAAGCATCTCTAGCATACC 60.040 40.741 0.00 0.00 0.00 2.73
164 165 7.887381 TCCTACTAAAAGCATCTCTAGCATAC 58.113 38.462 0.00 0.00 0.00 2.39
165 166 8.361139 GTTCCTACTAAAAGCATCTCTAGCATA 58.639 37.037 0.00 0.00 0.00 3.14
166 167 6.985653 TCCTACTAAAAGCATCTCTAGCAT 57.014 37.500 0.00 0.00 0.00 3.79
167 168 6.407074 GGTTCCTACTAAAAGCATCTCTAGCA 60.407 42.308 0.00 0.00 0.00 3.49
168 169 5.986741 GGTTCCTACTAAAAGCATCTCTAGC 59.013 44.000 0.00 0.00 0.00 3.42
169 170 7.068839 TCTGGTTCCTACTAAAAGCATCTCTAG 59.931 40.741 0.00 0.00 32.94 2.43
170 171 6.895756 TCTGGTTCCTACTAAAAGCATCTCTA 59.104 38.462 0.00 0.00 32.94 2.43
171 172 5.721960 TCTGGTTCCTACTAAAAGCATCTCT 59.278 40.000 0.00 0.00 32.94 3.10
172 173 5.978814 TCTGGTTCCTACTAAAAGCATCTC 58.021 41.667 0.00 0.00 32.94 2.75
173 174 6.174049 GTTCTGGTTCCTACTAAAAGCATCT 58.826 40.000 0.00 0.00 32.94 2.90
174 175 5.354513 GGTTCTGGTTCCTACTAAAAGCATC 59.645 44.000 0.00 0.00 32.94 3.91
175 176 5.254115 GGTTCTGGTTCCTACTAAAAGCAT 58.746 41.667 0.00 0.00 32.94 3.79
176 177 4.506095 GGGTTCTGGTTCCTACTAAAAGCA 60.506 45.833 0.00 0.00 0.00 3.91
177 178 4.008330 GGGTTCTGGTTCCTACTAAAAGC 58.992 47.826 0.00 0.00 0.00 3.51
178 179 5.221864 ACAGGGTTCTGGTTCCTACTAAAAG 60.222 44.000 0.00 0.00 44.99 2.27
179 180 4.661709 ACAGGGTTCTGGTTCCTACTAAAA 59.338 41.667 0.00 0.00 44.99 1.52
180 181 4.237018 ACAGGGTTCTGGTTCCTACTAAA 58.763 43.478 0.00 0.00 44.99 1.85
181 182 3.865571 ACAGGGTTCTGGTTCCTACTAA 58.134 45.455 0.00 0.00 44.99 2.24
182 183 3.555117 ACAGGGTTCTGGTTCCTACTA 57.445 47.619 0.00 0.00 44.99 1.82
183 184 2.417719 ACAGGGTTCTGGTTCCTACT 57.582 50.000 0.00 0.00 44.99 2.57
190 191 5.014228 AGCTAAATAGAAACAGGGTTCTGGT 59.986 40.000 9.78 0.00 44.02 4.00
191 192 5.355350 CAGCTAAATAGAAACAGGGTTCTGG 59.645 44.000 9.78 0.00 44.99 3.86
192 193 5.163713 GCAGCTAAATAGAAACAGGGTTCTG 60.164 44.000 9.78 0.00 46.10 3.02
193 194 4.944317 GCAGCTAAATAGAAACAGGGTTCT 59.056 41.667 4.80 4.80 40.89 3.01
194 195 4.096532 GGCAGCTAAATAGAAACAGGGTTC 59.903 45.833 0.00 0.00 0.00 3.62
195 196 4.017126 GGCAGCTAAATAGAAACAGGGTT 58.983 43.478 0.00 0.00 0.00 4.11
196 197 3.267031 AGGCAGCTAAATAGAAACAGGGT 59.733 43.478 0.00 0.00 0.00 4.34
197 198 3.891049 AGGCAGCTAAATAGAAACAGGG 58.109 45.455 0.00 0.00 0.00 4.45
198 199 5.393461 CCAAAGGCAGCTAAATAGAAACAGG 60.393 44.000 0.00 0.00 0.00 4.00
199 200 5.644644 CCAAAGGCAGCTAAATAGAAACAG 58.355 41.667 0.00 0.00 0.00 3.16
200 201 5.643379 CCAAAGGCAGCTAAATAGAAACA 57.357 39.130 0.00 0.00 0.00 2.83
241 242 2.629656 AAATCGCAGCCACACAGCC 61.630 57.895 0.00 0.00 0.00 4.85
251 252 4.183686 CGCAGGCCCAAATCGCAG 62.184 66.667 0.00 0.00 0.00 5.18
278 279 4.056050 ACAAGATCGTTCCTACACAACAC 58.944 43.478 0.00 0.00 0.00 3.32
285 286 7.039882 TCAAGGAATTACAAGATCGTTCCTAC 58.960 38.462 5.48 0.00 45.84 3.18
286 287 7.093465 ACTCAAGGAATTACAAGATCGTTCCTA 60.093 37.037 5.48 0.00 45.84 2.94
288 289 5.875359 ACTCAAGGAATTACAAGATCGTTCC 59.125 40.000 0.00 0.00 38.85 3.62
289 290 6.969828 ACTCAAGGAATTACAAGATCGTTC 57.030 37.500 0.00 0.00 0.00 3.95
290 291 8.883731 CATTACTCAAGGAATTACAAGATCGTT 58.116 33.333 0.00 0.00 0.00 3.85
291 292 8.258007 TCATTACTCAAGGAATTACAAGATCGT 58.742 33.333 0.00 0.00 0.00 3.73
292 293 8.648557 TCATTACTCAAGGAATTACAAGATCG 57.351 34.615 0.00 0.00 0.00 3.69
297 298 9.753674 AGGATTTCATTACTCAAGGAATTACAA 57.246 29.630 0.00 0.00 34.65 2.41
298 299 9.753674 AAGGATTTCATTACTCAAGGAATTACA 57.246 29.630 0.00 0.00 34.65 2.41
398 399 7.363793 GCTGGGACATTCCAAAACATATTTAGT 60.364 37.037 0.00 0.00 38.64 2.24
399 400 6.980397 GCTGGGACATTCCAAAACATATTTAG 59.020 38.462 0.00 0.00 38.64 1.85
400 401 6.438741 TGCTGGGACATTCCAAAACATATTTA 59.561 34.615 0.00 0.00 38.64 1.40
407 409 2.932187 GCATGCTGGGACATTCCAAAAC 60.932 50.000 11.37 0.00 38.64 2.43
414 416 0.032912 TCCATGCATGCTGGGACATT 60.033 50.000 26.05 0.42 38.20 2.71
437 439 8.483758 GGGAGAATGTCTTTTCCTACTATAACA 58.516 37.037 0.00 0.00 0.00 2.41
442 444 6.632672 GCATGGGAGAATGTCTTTTCCTACTA 60.633 42.308 0.00 0.00 0.00 1.82
443 445 5.749462 CATGGGAGAATGTCTTTTCCTACT 58.251 41.667 0.00 0.00 0.00 2.57
444 446 4.336713 GCATGGGAGAATGTCTTTTCCTAC 59.663 45.833 0.00 0.00 0.00 3.18
445 447 4.018506 TGCATGGGAGAATGTCTTTTCCTA 60.019 41.667 0.00 0.00 0.00 2.94
446 448 3.245371 TGCATGGGAGAATGTCTTTTCCT 60.245 43.478 0.00 0.00 0.00 3.36
447 449 3.091545 TGCATGGGAGAATGTCTTTTCC 58.908 45.455 0.00 0.00 0.00 3.13
466 468 3.253188 ACGGTATTTACCATGCATGATGC 59.747 43.478 28.31 15.66 46.80 3.91
467 469 4.786507 CACGGTATTTACCATGCATGATG 58.213 43.478 28.31 14.49 46.80 3.07
527 529 6.887626 ATACAATGAGAACATGCATGCATA 57.112 33.333 31.73 16.51 36.79 3.14
599 601 3.953612 AGGAAAAAGTTGTCTGCACATGA 59.046 39.130 0.00 0.00 30.55 3.07
783 819 8.460831 AAACTTGTCAAAATATATTCAACGGC 57.539 30.769 0.00 0.00 0.00 5.68
810 846 8.236586 TCTCACCATGTTTTAGATTCGAATTTG 58.763 33.333 12.81 0.00 0.00 2.32
1055 1101 9.411801 TGCGACTCTATCACAGAAATATATTTC 57.588 33.333 24.71 24.71 44.91 2.17
1128 1567 3.859386 CAGTTTGTGTGTCAGCCTTTTTC 59.141 43.478 0.00 0.00 0.00 2.29
1154 1596 3.250280 TGTACGTCTCACTCTTGTCAGAC 59.750 47.826 0.00 0.00 33.29 3.51
1163 1605 0.882474 ACCTGCTGTACGTCTCACTC 59.118 55.000 0.00 0.00 0.00 3.51
1191 1633 7.607991 CAGGGTGGGAAAGATATCATAATGTAC 59.392 40.741 5.32 0.00 0.00 2.90
1192 1634 7.294720 ACAGGGTGGGAAAGATATCATAATGTA 59.705 37.037 5.32 0.00 0.00 2.29
1193 1635 6.103205 ACAGGGTGGGAAAGATATCATAATGT 59.897 38.462 5.32 0.00 0.00 2.71
1339 1793 3.506067 TCTCTGTCAGAACGCATGACTTA 59.494 43.478 14.11 4.32 45.87 2.24
1441 1895 7.015682 CCTTGTCCTACACATGATAGGTTCTAT 59.984 40.741 20.34 0.00 40.27 1.98
1482 1936 5.843673 TTCATGTTAAAGGTTCTGCACAA 57.156 34.783 0.00 0.00 0.00 3.33
1501 1956 3.117794 CCGTACGTGTTCTTGTCTTTCA 58.882 45.455 15.21 0.00 0.00 2.69
1588 2043 1.812686 CTTCTTCCCCGACGTCCACA 61.813 60.000 10.58 0.00 0.00 4.17
1678 2133 3.011369 AGGGAGATAAGGTTTTTGGGGAC 59.989 47.826 0.00 0.00 0.00 4.46
1696 2151 0.324091 GTCCTGTACGGGAGAAGGGA 60.324 60.000 24.28 0.00 35.87 4.20
1730 2185 2.128507 GGGACAGTAGGCCTCCGAG 61.129 68.421 9.68 0.00 0.00 4.63
1806 2261 1.512926 CTCTCACCACAAAGTTCCGG 58.487 55.000 0.00 0.00 0.00 5.14
1965 2421 2.798283 GTGGACACTGAATTCGAACGAA 59.202 45.455 11.85 11.85 38.59 3.85
1997 2454 1.210967 AGGTCACGTGGGAGTTGAAAA 59.789 47.619 17.00 0.00 0.00 2.29
2019 2476 2.352686 CGCACGACGGGTATACGG 60.353 66.667 0.00 0.00 38.44 4.02
2062 2519 2.103410 GCGGGTTGCGGTAATGAAT 58.897 52.632 0.00 0.00 0.00 2.57
2063 2520 3.580916 GCGGGTTGCGGTAATGAA 58.419 55.556 0.00 0.00 0.00 2.57
2210 2687 8.476447 GCAAGGGATACTACTAAAGTTTAGTCT 58.524 37.037 27.43 17.60 39.80 3.24
2283 2761 8.871629 TTTGGGTAGCTCAATAACTATTTCAA 57.128 30.769 0.00 0.00 0.00 2.69
2298 2776 7.119387 AGTCTATTTTGCTATTTTGGGTAGCT 58.881 34.615 6.69 0.00 43.79 3.32
2323 2801 5.619757 CGAGAGTGCATTTTGCTGGAATTTA 60.620 40.000 0.00 0.00 45.31 1.40
2328 2806 1.159285 CGAGAGTGCATTTTGCTGGA 58.841 50.000 0.00 0.00 45.31 3.86
2329 2807 0.169672 CCGAGAGTGCATTTTGCTGG 59.830 55.000 0.00 0.00 45.31 4.85
2330 2808 1.129998 CTCCGAGAGTGCATTTTGCTG 59.870 52.381 0.00 0.00 45.31 4.41
2331 2809 1.002430 TCTCCGAGAGTGCATTTTGCT 59.998 47.619 0.00 0.00 45.31 3.91
2332 2810 1.442769 TCTCCGAGAGTGCATTTTGC 58.557 50.000 0.00 0.00 45.29 3.68
2333 2811 4.691860 AAATCTCCGAGAGTGCATTTTG 57.308 40.909 4.07 0.00 0.00 2.44
2334 2812 4.520492 ACAAAATCTCCGAGAGTGCATTTT 59.480 37.500 4.07 2.99 0.00 1.82
2335 2813 4.074970 ACAAAATCTCCGAGAGTGCATTT 58.925 39.130 4.07 0.00 0.00 2.32
2336 2814 3.679389 ACAAAATCTCCGAGAGTGCATT 58.321 40.909 4.07 0.00 0.00 3.56
2337 2815 3.340814 ACAAAATCTCCGAGAGTGCAT 57.659 42.857 4.07 0.00 0.00 3.96
2338 2816 2.807967 CAACAAAATCTCCGAGAGTGCA 59.192 45.455 4.07 0.00 0.00 4.57
2339 2817 3.067106 TCAACAAAATCTCCGAGAGTGC 58.933 45.455 4.07 0.00 0.00 4.40
2340 2818 4.931601 TGATCAACAAAATCTCCGAGAGTG 59.068 41.667 4.07 4.87 0.00 3.51
2341 2819 5.152623 TGATCAACAAAATCTCCGAGAGT 57.847 39.130 4.07 0.00 0.00 3.24
2342 2820 5.174395 ACTGATCAACAAAATCTCCGAGAG 58.826 41.667 4.07 0.00 0.00 3.20
2343 2821 5.152623 ACTGATCAACAAAATCTCCGAGA 57.847 39.130 0.00 0.00 0.00 4.04
2344 2822 5.869753 AACTGATCAACAAAATCTCCGAG 57.130 39.130 0.00 0.00 0.00 4.63
2345 2823 5.181245 GGAAACTGATCAACAAAATCTCCGA 59.819 40.000 0.00 0.00 0.00 4.55
2346 2824 5.182001 AGGAAACTGATCAACAAAATCTCCG 59.818 40.000 0.00 0.00 41.13 4.63
2381 2859 4.410400 GCCTAGCCCAACTGCCGT 62.410 66.667 0.00 0.00 0.00 5.68
2817 3312 1.977544 CCGACCCGAGAAGGACACT 60.978 63.158 0.00 0.00 45.00 3.55
2890 3385 4.500116 GGAGTCCACCGCGAGCTC 62.500 72.222 8.23 2.73 0.00 4.09
3073 3664 1.073216 CTACCAGCGAGCACGAACAG 61.073 60.000 8.01 0.00 42.66 3.16
3569 4172 1.976132 CTCCACCTCCATGCACGGAT 61.976 60.000 0.00 0.00 33.56 4.18
3722 4326 3.233980 TGGGATCATCTCCGGCCG 61.234 66.667 21.04 21.04 46.01 6.13
3726 4330 0.528466 CACACGTGGGATCATCTCCG 60.528 60.000 21.57 0.00 46.01 4.63
3957 4836 3.667282 CTGCTGCTGCCACGCTTT 61.667 61.111 13.47 0.00 38.71 3.51
4055 5035 3.538591 ACATGCGATGAGATGTGAACAT 58.461 40.909 0.00 0.00 39.70 2.71
4172 5181 7.869429 CAGAATAATTCTTTGAGTTGCCAAGTT 59.131 33.333 0.00 0.00 38.11 2.66
4173 5182 7.231317 TCAGAATAATTCTTTGAGTTGCCAAGT 59.769 33.333 0.00 0.00 38.11 3.16
4237 5250 4.864334 CTGCCGGGGTGGATCAGC 62.864 72.222 2.18 0.00 42.00 4.26
4479 5498 7.451281 TCGAATGAAATGTTCGTCTATTCTC 57.549 36.000 7.94 0.00 46.21 2.87
4497 5516 8.970691 ATTAGAAAGAACACCAATTTCGAATG 57.029 30.769 0.00 0.00 37.09 2.67
4552 5579 2.861462 TTGTTTGCTGGTCCGAAAAG 57.139 45.000 0.00 0.00 0.00 2.27
4589 5637 9.849166 AAAAACAGTTCGTGAATTAGAAAAGAA 57.151 25.926 0.00 0.00 0.00 2.52
4628 5676 2.681344 GACGTGACTTTTGTGGACCTTT 59.319 45.455 0.00 0.00 0.00 3.11
4629 5677 2.285977 GACGTGACTTTTGTGGACCTT 58.714 47.619 0.00 0.00 0.00 3.50
4630 5678 1.474498 GGACGTGACTTTTGTGGACCT 60.474 52.381 0.00 0.00 0.00 3.85
4631 5679 0.942252 GGACGTGACTTTTGTGGACC 59.058 55.000 0.00 0.00 0.00 4.46
4632 5680 1.329599 GTGGACGTGACTTTTGTGGAC 59.670 52.381 0.00 0.00 0.00 4.02
4633 5681 1.066071 TGTGGACGTGACTTTTGTGGA 60.066 47.619 0.00 0.00 0.00 4.02
4634 5682 1.063469 GTGTGGACGTGACTTTTGTGG 59.937 52.381 0.00 0.00 0.00 4.17
4635 5683 1.735018 TGTGTGGACGTGACTTTTGTG 59.265 47.619 0.00 0.00 0.00 3.33
4636 5684 2.102070 TGTGTGGACGTGACTTTTGT 57.898 45.000 0.00 0.00 0.00 2.83
4637 5685 3.691049 AATGTGTGGACGTGACTTTTG 57.309 42.857 0.00 0.00 0.00 2.44
4638 5686 6.385649 AATTAATGTGTGGACGTGACTTTT 57.614 33.333 0.00 0.00 0.00 2.27
4692 5740 2.467880 TGGCGGAAGAAAGATCTACCT 58.532 47.619 0.00 0.00 33.77 3.08
4700 5748 1.128692 GAACACGATGGCGGAAGAAAG 59.871 52.381 0.00 0.00 43.17 2.62
4702 5750 1.011968 CGAACACGATGGCGGAAGAA 61.012 55.000 0.00 0.00 43.17 2.52
4703 5751 1.445410 CGAACACGATGGCGGAAGA 60.445 57.895 0.00 0.00 43.17 2.87
4710 5758 1.327460 CATTGTAGGCGAACACGATGG 59.673 52.381 0.00 0.00 34.28 3.51
4712 5760 2.268298 GACATTGTAGGCGAACACGAT 58.732 47.619 0.00 0.00 0.00 3.73
4719 5767 0.179181 GACGACGACATTGTAGGCGA 60.179 55.000 28.31 0.00 41.99 5.54
4727 5775 0.809385 ATGACGAGGACGACGACATT 59.191 50.000 0.00 0.00 41.31 2.71
4734 5782 0.683179 ACCATGGATGACGAGGACGA 60.683 55.000 21.47 0.00 42.66 4.20
4963 6011 1.109323 GCCACCATTACATCCTGCCC 61.109 60.000 0.00 0.00 0.00 5.36
4964 6012 1.447317 CGCCACCATTACATCCTGCC 61.447 60.000 0.00 0.00 0.00 4.85
4965 6013 1.447317 CCGCCACCATTACATCCTGC 61.447 60.000 0.00 0.00 0.00 4.85
4966 6014 0.819259 CCCGCCACCATTACATCCTG 60.819 60.000 0.00 0.00 0.00 3.86
4967 6015 1.531748 CCCGCCACCATTACATCCT 59.468 57.895 0.00 0.00 0.00 3.24
5067 6215 0.107116 TTGTACGGGCAGTTGTGGTT 60.107 50.000 0.00 0.00 0.00 3.67
5072 6220 1.289109 CGACCTTGTACGGGCAGTTG 61.289 60.000 0.00 0.00 30.13 3.16
5073 6221 1.005394 CGACCTTGTACGGGCAGTT 60.005 57.895 0.00 0.00 30.13 3.16
5089 6237 0.032952 CACCTCGGAGTGGAAAACGA 59.967 55.000 4.02 0.00 45.27 3.85
5122 6270 1.186200 CGTGAAGGAGGAGGTGATGA 58.814 55.000 0.00 0.00 0.00 2.92
5149 6297 2.118679 CAGGTGATGTCTATGTCCCCA 58.881 52.381 0.00 0.00 0.00 4.96
5181 6329 1.059006 GGCCTGGAGGAGATGATGGT 61.059 60.000 0.00 0.00 37.39 3.55
5195 6343 2.664081 GGAGGAGTGTGAGGGCCTG 61.664 68.421 12.95 0.00 0.00 4.85
5239 6387 4.195416 GTGGATTTCAAGATGGAGGACTC 58.805 47.826 0.00 0.00 0.00 3.36
5251 6399 0.539438 AAGCGGCTGGTGGATTTCAA 60.539 50.000 1.81 0.00 0.00 2.69
5254 6402 1.678970 GGAAGCGGCTGGTGGATTT 60.679 57.895 1.81 0.00 0.00 2.17
5255 6403 2.044946 GGAAGCGGCTGGTGGATT 60.045 61.111 1.81 0.00 0.00 3.01
5258 6406 4.785453 GGAGGAAGCGGCTGGTGG 62.785 72.222 1.81 0.00 0.00 4.61
5267 6415 2.202810 CGCCGAAGAGGAGGAAGC 60.203 66.667 0.00 0.00 45.00 3.86
5275 6423 4.003788 ACCACCACCGCCGAAGAG 62.004 66.667 0.00 0.00 0.00 2.85
5361 6525 0.598562 AGATCAACTGTGAGTCGCGT 59.401 50.000 5.77 0.00 37.14 6.01
5401 6565 0.531200 ATTCTCGTTGTCCCGGAGAC 59.469 55.000 0.73 9.78 46.51 3.36
5402 6566 0.815734 GATTCTCGTTGTCCCGGAGA 59.184 55.000 0.73 0.00 0.00 3.71
5403 6567 0.525668 CGATTCTCGTTGTCCCGGAG 60.526 60.000 0.73 0.00 34.72 4.63
5404 6568 1.509463 CGATTCTCGTTGTCCCGGA 59.491 57.895 0.73 0.00 34.72 5.14
5405 6569 1.518572 CCGATTCTCGTTGTCCCGG 60.519 63.158 0.00 0.00 38.40 5.73
5406 6570 2.165301 GCCGATTCTCGTTGTCCCG 61.165 63.158 0.00 0.00 38.40 5.14
5407 6571 1.079405 TGCCGATTCTCGTTGTCCC 60.079 57.895 0.00 0.00 38.40 4.46
5408 6572 1.359459 GGTGCCGATTCTCGTTGTCC 61.359 60.000 0.00 0.00 38.40 4.02
5409 6573 0.389948 AGGTGCCGATTCTCGTTGTC 60.390 55.000 0.00 0.00 38.40 3.18
5410 6574 0.670546 CAGGTGCCGATTCTCGTTGT 60.671 55.000 0.00 0.00 38.40 3.32
5411 6575 0.389817 TCAGGTGCCGATTCTCGTTG 60.390 55.000 0.00 0.00 38.40 4.10
5412 6576 0.537188 ATCAGGTGCCGATTCTCGTT 59.463 50.000 0.00 0.00 38.40 3.85
5413 6577 0.103208 GATCAGGTGCCGATTCTCGT 59.897 55.000 0.00 0.00 38.40 4.18
5414 6578 0.387202 AGATCAGGTGCCGATTCTCG 59.613 55.000 0.00 0.00 40.07 4.04
5415 6579 1.539929 CCAGATCAGGTGCCGATTCTC 60.540 57.143 0.00 0.00 0.00 2.87
5416 6580 0.467384 CCAGATCAGGTGCCGATTCT 59.533 55.000 0.00 0.00 0.00 2.40
5417 6581 0.533755 CCCAGATCAGGTGCCGATTC 60.534 60.000 3.16 0.00 0.00 2.52
5418 6582 1.528824 CCCAGATCAGGTGCCGATT 59.471 57.895 3.16 0.00 0.00 3.34
5419 6583 3.112205 GCCCAGATCAGGTGCCGAT 62.112 63.158 3.16 0.00 0.00 4.18
5420 6584 3.785859 GCCCAGATCAGGTGCCGA 61.786 66.667 3.16 0.00 0.00 5.54
5421 6585 3.746949 GAGCCCAGATCAGGTGCCG 62.747 68.421 12.06 0.00 0.00 5.69
5422 6586 2.191641 GAGCCCAGATCAGGTGCC 59.808 66.667 12.06 3.49 0.00 5.01
5423 6587 1.153208 CTGAGCCCAGATCAGGTGC 60.153 63.158 3.16 6.47 41.66 5.01
5424 6588 2.600439 TCTGAGCCCAGATCAGGTG 58.400 57.895 9.74 0.00 44.89 4.00
5436 6600 1.389609 CCAATGGGTGGCATCTGAGC 61.390 60.000 0.00 0.00 41.72 4.26
5437 6601 2.803203 CCAATGGGTGGCATCTGAG 58.197 57.895 0.00 0.00 41.72 3.35
5449 6613 1.654137 TATGCCCACCTCCCCAATGG 61.654 60.000 0.00 0.00 0.00 3.16
5450 6614 0.178981 CTATGCCCACCTCCCCAATG 60.179 60.000 0.00 0.00 0.00 2.82
5451 6615 0.328450 TCTATGCCCACCTCCCCAAT 60.328 55.000 0.00 0.00 0.00 3.16
5452 6616 0.328450 ATCTATGCCCACCTCCCCAA 60.328 55.000 0.00 0.00 0.00 4.12
5453 6617 0.328450 AATCTATGCCCACCTCCCCA 60.328 55.000 0.00 0.00 0.00 4.96
5454 6618 0.402121 GAATCTATGCCCACCTCCCC 59.598 60.000 0.00 0.00 0.00 4.81
5455 6619 1.439543 AGAATCTATGCCCACCTCCC 58.560 55.000 0.00 0.00 0.00 4.30
5456 6620 3.008485 CCTTAGAATCTATGCCCACCTCC 59.992 52.174 0.00 0.00 0.00 4.30
5457 6621 3.904339 TCCTTAGAATCTATGCCCACCTC 59.096 47.826 0.00 0.00 0.00 3.85
5458 6622 3.941629 TCCTTAGAATCTATGCCCACCT 58.058 45.455 0.00 0.00 0.00 4.00
5459 6623 4.917906 ATCCTTAGAATCTATGCCCACC 57.082 45.455 0.00 0.00 0.00 4.61
5460 6624 6.651225 GTGTAATCCTTAGAATCTATGCCCAC 59.349 42.308 0.00 0.00 0.00 4.61
5461 6625 6.558775 AGTGTAATCCTTAGAATCTATGCCCA 59.441 38.462 0.00 0.00 0.00 5.36
5462 6626 7.010339 AGTGTAATCCTTAGAATCTATGCCC 57.990 40.000 0.00 0.00 0.00 5.36
5463 6627 7.100409 GGAGTGTAATCCTTAGAATCTATGCC 58.900 42.308 0.00 0.00 36.35 4.40
5464 6628 7.671302 TGGAGTGTAATCCTTAGAATCTATGC 58.329 38.462 0.00 0.00 40.29 3.14
5465 6629 9.868277 GATGGAGTGTAATCCTTAGAATCTATG 57.132 37.037 0.00 0.00 40.29 2.23
5466 6630 8.744652 CGATGGAGTGTAATCCTTAGAATCTAT 58.255 37.037 0.00 0.00 40.29 1.98
5467 6631 7.724506 ACGATGGAGTGTAATCCTTAGAATCTA 59.275 37.037 0.00 0.00 40.29 1.98
5468 6632 6.551601 ACGATGGAGTGTAATCCTTAGAATCT 59.448 38.462 0.00 0.00 40.29 2.40
5469 6633 6.750148 ACGATGGAGTGTAATCCTTAGAATC 58.250 40.000 0.00 0.00 40.29 2.52
5470 6634 6.732896 ACGATGGAGTGTAATCCTTAGAAT 57.267 37.500 0.00 0.00 40.29 2.40
5471 6635 6.540438 AACGATGGAGTGTAATCCTTAGAA 57.460 37.500 0.00 0.00 40.29 2.10
5472 6636 6.540438 AAACGATGGAGTGTAATCCTTAGA 57.460 37.500 0.00 0.00 40.29 2.10
5473 6637 7.762615 TGTAAAACGATGGAGTGTAATCCTTAG 59.237 37.037 0.00 0.00 40.29 2.18
5474 6638 7.613585 TGTAAAACGATGGAGTGTAATCCTTA 58.386 34.615 0.00 0.00 40.29 2.69
5475 6639 6.469410 TGTAAAACGATGGAGTGTAATCCTT 58.531 36.000 0.00 0.00 40.29 3.36
5476 6640 6.045072 TGTAAAACGATGGAGTGTAATCCT 57.955 37.500 0.00 0.00 40.29 3.24
5477 6641 6.103997 TCTGTAAAACGATGGAGTGTAATCC 58.896 40.000 0.00 0.00 40.03 3.01
5478 6642 6.255887 CCTCTGTAAAACGATGGAGTGTAATC 59.744 42.308 0.00 0.00 0.00 1.75
5479 6643 6.106673 CCTCTGTAAAACGATGGAGTGTAAT 58.893 40.000 0.00 0.00 0.00 1.89
5480 6644 5.011329 ACCTCTGTAAAACGATGGAGTGTAA 59.989 40.000 0.00 0.00 0.00 2.41
5481 6645 4.525487 ACCTCTGTAAAACGATGGAGTGTA 59.475 41.667 0.00 0.00 0.00 2.90
5482 6646 3.323979 ACCTCTGTAAAACGATGGAGTGT 59.676 43.478 0.00 0.00 0.00 3.55
5483 6647 3.926616 ACCTCTGTAAAACGATGGAGTG 58.073 45.455 0.00 0.00 0.00 3.51
5484 6648 5.733620 TTACCTCTGTAAAACGATGGAGT 57.266 39.130 0.00 0.00 34.06 3.85
5485 6649 6.338146 TGATTACCTCTGTAAAACGATGGAG 58.662 40.000 0.00 0.00 40.21 3.86
5486 6650 6.288941 TGATTACCTCTGTAAAACGATGGA 57.711 37.500 0.00 0.00 40.21 3.41
5487 6651 5.006746 GCTGATTACCTCTGTAAAACGATGG 59.993 44.000 0.00 0.00 40.21 3.51
5488 6652 5.580691 TGCTGATTACCTCTGTAAAACGATG 59.419 40.000 0.00 0.00 40.21 3.84
5489 6653 5.730550 TGCTGATTACCTCTGTAAAACGAT 58.269 37.500 0.00 0.00 40.21 3.73
5490 6654 5.142061 TGCTGATTACCTCTGTAAAACGA 57.858 39.130 0.00 0.00 40.21 3.85
5491 6655 5.856126 TTGCTGATTACCTCTGTAAAACG 57.144 39.130 0.00 0.00 40.21 3.60
5497 6661 8.043710 GGCTAATATATTGCTGATTACCTCTGT 58.956 37.037 8.28 0.00 0.00 3.41
5498 6662 8.043113 TGGCTAATATATTGCTGATTACCTCTG 58.957 37.037 8.28 0.00 0.00 3.35
5499 6663 8.150827 TGGCTAATATATTGCTGATTACCTCT 57.849 34.615 8.28 0.00 0.00 3.69
5500 6664 8.669243 GTTGGCTAATATATTGCTGATTACCTC 58.331 37.037 8.28 0.00 0.00 3.85
5501 6665 8.386264 AGTTGGCTAATATATTGCTGATTACCT 58.614 33.333 8.28 0.23 0.00 3.08
5502 6666 8.567285 AGTTGGCTAATATATTGCTGATTACC 57.433 34.615 8.28 0.00 0.00 2.85
5504 6668 9.231297 GGAAGTTGGCTAATATATTGCTGATTA 57.769 33.333 8.28 0.00 0.00 1.75
5505 6669 7.094634 CGGAAGTTGGCTAATATATTGCTGATT 60.095 37.037 8.28 4.79 0.00 2.57
5506 6670 6.372659 CGGAAGTTGGCTAATATATTGCTGAT 59.627 38.462 8.28 0.00 0.00 2.90
5507 6671 5.700832 CGGAAGTTGGCTAATATATTGCTGA 59.299 40.000 8.28 1.47 0.00 4.26
5508 6672 5.700832 TCGGAAGTTGGCTAATATATTGCTG 59.299 40.000 8.28 0.24 0.00 4.41
5509 6673 5.701290 GTCGGAAGTTGGCTAATATATTGCT 59.299 40.000 8.28 0.00 0.00 3.91
5510 6674 5.468746 TGTCGGAAGTTGGCTAATATATTGC 59.531 40.000 8.28 9.25 0.00 3.56
5511 6675 7.490962 TTGTCGGAAGTTGGCTAATATATTG 57.509 36.000 8.28 0.09 0.00 1.90
5512 6676 7.990886 TCTTTGTCGGAAGTTGGCTAATATATT 59.009 33.333 2.97 2.97 0.00 1.28
5513 6677 7.441458 GTCTTTGTCGGAAGTTGGCTAATATAT 59.559 37.037 0.00 0.00 0.00 0.86
5514 6678 6.759827 GTCTTTGTCGGAAGTTGGCTAATATA 59.240 38.462 0.00 0.00 0.00 0.86
5515 6679 5.585047 GTCTTTGTCGGAAGTTGGCTAATAT 59.415 40.000 0.00 0.00 0.00 1.28
5516 6680 4.933400 GTCTTTGTCGGAAGTTGGCTAATA 59.067 41.667 0.00 0.00 0.00 0.98
5517 6681 3.751698 GTCTTTGTCGGAAGTTGGCTAAT 59.248 43.478 0.00 0.00 0.00 1.73
5518 6682 3.135994 GTCTTTGTCGGAAGTTGGCTAA 58.864 45.455 0.00 0.00 0.00 3.09
5519 6683 2.103432 TGTCTTTGTCGGAAGTTGGCTA 59.897 45.455 0.00 0.00 0.00 3.93
5520 6684 1.134220 TGTCTTTGTCGGAAGTTGGCT 60.134 47.619 0.00 0.00 0.00 4.75
5521 6685 1.264288 CTGTCTTTGTCGGAAGTTGGC 59.736 52.381 0.00 0.00 0.00 4.52
5522 6686 2.561569 ACTGTCTTTGTCGGAAGTTGG 58.438 47.619 0.00 0.00 0.00 3.77
5523 6687 3.621268 TGAACTGTCTTTGTCGGAAGTTG 59.379 43.478 0.00 0.00 0.00 3.16
5524 6688 3.869065 TGAACTGTCTTTGTCGGAAGTT 58.131 40.909 0.00 0.00 0.00 2.66
5525 6689 3.458189 CTGAACTGTCTTTGTCGGAAGT 58.542 45.455 0.00 0.00 0.00 3.01
5526 6690 2.221981 GCTGAACTGTCTTTGTCGGAAG 59.778 50.000 0.00 0.00 0.00 3.46
5527 6691 2.210116 GCTGAACTGTCTTTGTCGGAA 58.790 47.619 0.00 0.00 0.00 4.30
5528 6692 1.865865 GCTGAACTGTCTTTGTCGGA 58.134 50.000 0.00 0.00 0.00 4.55
5529 6693 0.508641 CGCTGAACTGTCTTTGTCGG 59.491 55.000 0.00 0.00 0.00 4.79
5530 6694 1.190323 GTCGCTGAACTGTCTTTGTCG 59.810 52.381 0.00 0.00 0.00 4.35
5531 6695 2.474816 AGTCGCTGAACTGTCTTTGTC 58.525 47.619 0.00 0.00 0.00 3.18
5532 6696 2.604046 AGTCGCTGAACTGTCTTTGT 57.396 45.000 0.00 0.00 0.00 2.83
5533 6697 3.611517 CAAAGTCGCTGAACTGTCTTTG 58.388 45.455 0.00 0.00 36.86 2.77
5534 6698 2.032178 GCAAAGTCGCTGAACTGTCTTT 59.968 45.455 0.00 0.00 0.00 2.52
5535 6699 1.599542 GCAAAGTCGCTGAACTGTCTT 59.400 47.619 0.00 0.00 0.00 3.01
5536 6700 1.202580 AGCAAAGTCGCTGAACTGTCT 60.203 47.619 0.00 0.00 41.85 3.41
5537 6701 1.221414 AGCAAAGTCGCTGAACTGTC 58.779 50.000 0.00 0.00 41.85 3.51
5538 6702 3.386543 AGCAAAGTCGCTGAACTGT 57.613 47.368 0.00 0.00 41.85 3.55
5556 6720 1.155889 CGTGTTTGTCCTGCTATGCA 58.844 50.000 0.00 0.00 36.92 3.96
5557 6721 0.447801 CCGTGTTTGTCCTGCTATGC 59.552 55.000 0.00 0.00 0.00 3.14
5558 6722 0.447801 GCCGTGTTTGTCCTGCTATG 59.552 55.000 0.00 0.00 0.00 2.23
5559 6723 0.036164 TGCCGTGTTTGTCCTGCTAT 59.964 50.000 0.00 0.00 0.00 2.97
5560 6724 0.179043 TTGCCGTGTTTGTCCTGCTA 60.179 50.000 0.00 0.00 0.00 3.49
5561 6725 1.453015 TTGCCGTGTTTGTCCTGCT 60.453 52.632 0.00 0.00 0.00 4.24
5562 6726 1.299089 GTTGCCGTGTTTGTCCTGC 60.299 57.895 0.00 0.00 0.00 4.85
5563 6727 0.453793 TTGTTGCCGTGTTTGTCCTG 59.546 50.000 0.00 0.00 0.00 3.86
5564 6728 0.454196 GTTGTTGCCGTGTTTGTCCT 59.546 50.000 0.00 0.00 0.00 3.85
5565 6729 0.171455 TGTTGTTGCCGTGTTTGTCC 59.829 50.000 0.00 0.00 0.00 4.02
5566 6730 1.264672 GTGTTGTTGCCGTGTTTGTC 58.735 50.000 0.00 0.00 0.00 3.18
5567 6731 0.455295 CGTGTTGTTGCCGTGTTTGT 60.455 50.000 0.00 0.00 0.00 2.83
5568 6732 1.136872 CCGTGTTGTTGCCGTGTTTG 61.137 55.000 0.00 0.00 0.00 2.93
5569 6733 1.137825 CCGTGTTGTTGCCGTGTTT 59.862 52.632 0.00 0.00 0.00 2.83
5570 6734 2.795297 CCGTGTTGTTGCCGTGTT 59.205 55.556 0.00 0.00 0.00 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.