Multiple sequence alignment - TraesCS5A01G358200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G358200 chr5A 100.000 3190 0 0 1 3190 559823249 559820060 0.000000e+00 5891.0
1 TraesCS5A01G358200 chr5A 87.778 270 31 2 557 825 624798920 624799188 6.640000e-82 315.0
2 TraesCS5A01G358200 chr5B 92.186 1203 75 6 838 2034 540269431 540268242 0.000000e+00 1683.0
3 TraesCS5A01G358200 chr5B 90.871 241 22 0 573 813 447183248 447183488 1.100000e-84 324.0
4 TraesCS5A01G358200 chr5B 83.014 365 48 11 1 354 540270874 540270513 5.140000e-83 318.0
5 TraesCS5A01G358200 chr5B 89.105 257 25 3 568 821 633762377 633762633 1.850000e-82 316.0
6 TraesCS5A01G358200 chr5D 89.384 1055 67 18 209 1252 443652171 443651151 0.000000e+00 1286.0
7 TraesCS5A01G358200 chr5D 93.750 800 44 4 1253 2050 443650959 443650164 0.000000e+00 1195.0
8 TraesCS5A01G358200 chr5D 89.753 283 23 3 2762 3039 443648678 443648397 1.090000e-94 357.0
9 TraesCS5A01G358200 chr6D 91.051 257 23 0 565 821 348087602 348087858 6.550000e-92 348.0
10 TraesCS5A01G358200 chr7D 88.848 269 29 1 563 830 363048923 363048655 2.370000e-86 329.0
11 TraesCS5A01G358200 chr4D 88.764 267 30 0 560 826 145579504 145579770 8.530000e-86 327.0
12 TraesCS5A01G358200 chr4D 87.778 270 32 1 559 827 443208835 443209104 6.640000e-82 315.0
13 TraesCS5A01G358200 chr3D 88.973 263 26 2 566 825 481710199 481710461 3.970000e-84 322.0
14 TraesCS5A01G358200 chr2D 77.987 159 25 4 412 563 640180253 640180098 1.220000e-14 91.6
15 TraesCS5A01G358200 chr2B 75.000 168 41 1 2870 3037 647294307 647294141 3.410000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G358200 chr5A 559820060 559823249 3189 True 5891.0 5891 100.000000 1 3190 1 chr5A.!!$R1 3189
1 TraesCS5A01G358200 chr5B 540268242 540270874 2632 True 1000.5 1683 87.600000 1 2034 2 chr5B.!!$R1 2033
2 TraesCS5A01G358200 chr5D 443648397 443652171 3774 True 946.0 1286 90.962333 209 3039 3 chr5D.!!$R1 2830

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
906 1773 0.250727 GTGAAACCACAGCTGGGCTA 60.251 55.0 19.93 1.6 42.74 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2745 4273 0.035317 TATGATCAGACCCCGCATGC 59.965 55.0 7.91 7.91 0.0 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 7.861176 TTTAGTAATTCGGTTTGCATTGTTC 57.139 32.000 0.00 0.00 0.00 3.18
47 48 9.312146 CGGTTTGCATTGTTCAAATTATTTTAC 57.688 29.630 0.00 0.00 36.06 2.01
83 84 9.900264 CAATGTAATTTTAAGCGGATAAAAAGC 57.100 29.630 8.49 0.00 38.03 3.51
165 166 5.581085 GTGCCCATGTTTGTACTAGTCTTAG 59.419 44.000 0.00 0.00 0.00 2.18
200 201 3.965347 ACTGTAGAAGGTTACCAGTGTGT 59.035 43.478 3.51 0.00 0.00 3.72
207 208 9.310716 GTAGAAGGTTACCAGTGTGTATAAATC 57.689 37.037 3.51 0.00 0.00 2.17
601 627 8.967664 TTATTTACTCGGCATATTAGGTTTGT 57.032 30.769 0.00 0.00 0.00 2.83
766 1629 8.644619 GTTTTCTACAAACTTGGTCAAACTTTC 58.355 33.333 0.00 0.00 0.00 2.62
771 1634 9.849166 CTACAAACTTGGTCAAACTTTCTAAAA 57.151 29.630 0.00 0.00 0.00 1.52
797 1660 8.915871 TTTGACTTCATTCAAAGCTAATATGC 57.084 30.769 0.00 0.00 39.94 3.14
798 1661 7.628769 TGACTTCATTCAAAGCTAATATGCA 57.371 32.000 0.00 0.00 34.99 3.96
799 1662 8.054152 TGACTTCATTCAAAGCTAATATGCAA 57.946 30.769 0.00 0.00 34.99 4.08
821 1684 7.504238 TGCAAAGTAAATAAAAACAGAGGGAGA 59.496 33.333 0.00 0.00 0.00 3.71
906 1773 0.250727 GTGAAACCACAGCTGGGCTA 60.251 55.000 19.93 1.60 42.74 3.93
1260 2323 4.787280 CCCCTCACTCCTCGCCCT 62.787 72.222 0.00 0.00 0.00 5.19
1699 2768 3.500448 TCAGTCCATTTTGGCTGTGTA 57.500 42.857 13.76 0.00 40.30 2.90
1727 2797 6.405538 TGGTTTCTGTGCTTTCTGAATTTTT 58.594 32.000 0.00 0.00 0.00 1.94
1749 2819 0.865218 CGCTGTCACTGATCTCGAGC 60.865 60.000 7.81 0.00 0.00 5.03
1993 3063 8.927411 TGTTCAGAGTTATGGAGATGAATGATA 58.073 33.333 0.00 0.00 0.00 2.15
2030 3100 6.806249 TGTTGTGAGTTTGAGAACAAATTGAC 59.194 34.615 0.00 0.00 45.71 3.18
2052 3215 5.324409 ACCTTCAGAAATGAGCCATAAACA 58.676 37.500 0.00 0.00 0.00 2.83
2056 3219 7.277098 CCTTCAGAAATGAGCCATAAACATTTG 59.723 37.037 0.00 0.00 41.96 2.32
2057 3220 7.465353 TCAGAAATGAGCCATAAACATTTGA 57.535 32.000 0.00 0.00 41.96 2.69
2058 3221 7.541162 TCAGAAATGAGCCATAAACATTTGAG 58.459 34.615 0.00 0.00 41.96 3.02
2066 3229 6.435164 AGCCATAAACATTTGAGGAGGTAAT 58.565 36.000 0.00 0.00 0.00 1.89
2068 3231 8.058847 AGCCATAAACATTTGAGGAGGTAATAA 58.941 33.333 0.00 0.00 0.00 1.40
2069 3232 8.860088 GCCATAAACATTTGAGGAGGTAATAAT 58.140 33.333 0.00 0.00 0.00 1.28
2091 3254 4.525912 AACCAACAATCCATCTTCAAGC 57.474 40.909 0.00 0.00 0.00 4.01
2099 3262 6.662755 ACAATCCATCTTCAAGCTGGTTATA 58.337 36.000 7.17 0.00 33.40 0.98
2127 3290 0.603569 ACGACTTAGTCTGGTGGCTG 59.396 55.000 10.83 0.00 0.00 4.85
2135 3298 2.226315 TCTGGTGGCTGCCTGTGAT 61.226 57.895 21.03 0.00 0.00 3.06
2142 3305 0.464554 GGCTGCCTGTGATAAGGTCC 60.465 60.000 12.43 0.00 39.75 4.46
2158 3321 3.195661 AGGTCCGCAAATCGTCTAAATC 58.804 45.455 0.00 0.00 36.19 2.17
2167 3330 6.858478 CGCAAATCGTCTAAATCTAGAGATCA 59.142 38.462 0.00 0.00 34.73 2.92
2168 3331 7.379797 CGCAAATCGTCTAAATCTAGAGATCAA 59.620 37.037 0.00 0.00 34.73 2.57
2169 3332 8.484008 GCAAATCGTCTAAATCTAGAGATCAAC 58.516 37.037 0.00 0.00 34.73 3.18
2170 3333 9.521503 CAAATCGTCTAAATCTAGAGATCAACA 57.478 33.333 0.00 0.00 34.73 3.33
2188 3351 5.477510 TCAACAATGAAGTTTGTGTTTGCT 58.522 33.333 0.00 0.00 39.68 3.91
2192 3355 6.265577 ACAATGAAGTTTGTGTTTGCTAGTC 58.734 36.000 0.00 0.00 38.37 2.59
2200 3363 3.728845 TGTGTTTGCTAGTCTCCACTTC 58.271 45.455 0.00 0.00 33.62 3.01
2225 3388 4.511454 TGAAGTGTGAAAGGATTGTTCTCG 59.489 41.667 0.00 0.00 0.00 4.04
2231 3394 1.523758 AAGGATTGTTCTCGGTGCAC 58.476 50.000 8.80 8.80 0.00 4.57
2251 3414 4.204978 GCACGAGTTTTGTTCATCTTTGTG 59.795 41.667 0.00 0.00 0.00 3.33
2257 3420 7.220683 CGAGTTTTGTTCATCTTTGTGAAATGT 59.779 33.333 0.00 0.00 39.61 2.71
2269 3432 8.133024 TCTTTGTGAAATGTTAATATTGGGCT 57.867 30.769 0.00 0.00 0.00 5.19
2271 3434 6.463995 TGTGAAATGTTAATATTGGGCTCC 57.536 37.500 0.00 0.00 0.00 4.70
2286 3449 1.260544 GCTCCCTGAACATTTTGCCT 58.739 50.000 0.00 0.00 0.00 4.75
2287 3450 1.620323 GCTCCCTGAACATTTTGCCTT 59.380 47.619 0.00 0.00 0.00 4.35
2288 3451 2.611224 GCTCCCTGAACATTTTGCCTTG 60.611 50.000 0.00 0.00 0.00 3.61
2289 3452 1.344114 TCCCTGAACATTTTGCCTTGC 59.656 47.619 0.00 0.00 0.00 4.01
2299 3462 2.837532 TTTGCCTTGCTTTCCCATTC 57.162 45.000 0.00 0.00 0.00 2.67
2318 3481 2.600790 TCCACGGAGGACACTAAAAGA 58.399 47.619 0.00 0.00 43.07 2.52
2319 3482 2.298163 TCCACGGAGGACACTAAAAGAC 59.702 50.000 0.00 0.00 43.07 3.01
2325 3488 5.162075 CGGAGGACACTAAAAGACAGTTAG 58.838 45.833 0.00 0.00 35.16 2.34
2328 3491 7.387643 GGAGGACACTAAAAGACAGTTAGATT 58.612 38.462 0.00 0.00 33.57 2.40
2330 3493 6.651225 AGGACACTAAAAGACAGTTAGATTGC 59.349 38.462 0.00 0.00 33.57 3.56
2332 3495 6.220930 ACACTAAAAGACAGTTAGATTGCGA 58.779 36.000 0.00 0.00 33.57 5.10
2372 3535 8.514330 TTGAAAATACAACTACAGTTCCAGTT 57.486 30.769 0.00 0.00 35.83 3.16
2377 3540 3.804036 CAACTACAGTTCCAGTTGGTCA 58.196 45.455 6.76 0.00 45.08 4.02
2380 3543 3.454812 ACTACAGTTCCAGTTGGTCAGTT 59.545 43.478 0.00 0.00 36.34 3.16
2382 3545 3.279434 ACAGTTCCAGTTGGTCAGTTTC 58.721 45.455 0.00 0.00 36.34 2.78
2384 3547 3.313526 CAGTTCCAGTTGGTCAGTTTCTG 59.686 47.826 0.00 0.00 36.34 3.02
2385 3548 3.199946 AGTTCCAGTTGGTCAGTTTCTGA 59.800 43.478 0.00 0.00 38.25 3.27
2397 3560 5.657470 TCAGTTTCTGACACGAAATTCAG 57.343 39.130 0.00 0.00 40.65 3.02
2399 3562 4.273480 CAGTTTCTGACACGAAATTCAGGT 59.727 41.667 0.00 0.00 39.86 4.00
2400 3563 4.881850 AGTTTCTGACACGAAATTCAGGTT 59.118 37.500 0.00 0.00 39.86 3.50
2401 3564 5.007724 AGTTTCTGACACGAAATTCAGGTTC 59.992 40.000 0.00 0.00 39.86 3.62
2402 3565 4.066646 TCTGACACGAAATTCAGGTTCA 57.933 40.909 0.00 0.00 39.86 3.18
2403 3566 4.641396 TCTGACACGAAATTCAGGTTCAT 58.359 39.130 0.00 0.00 39.86 2.57
2404 3567 4.690748 TCTGACACGAAATTCAGGTTCATC 59.309 41.667 0.00 0.00 39.86 2.92
2405 3568 4.641396 TGACACGAAATTCAGGTTCATCT 58.359 39.130 0.00 0.00 0.00 2.90
2406 3569 5.063204 TGACACGAAATTCAGGTTCATCTT 58.937 37.500 0.00 0.00 0.00 2.40
2417 3945 8.924511 ATTCAGGTTCATCTTTTGTCTTAGAA 57.075 30.769 0.00 0.00 0.00 2.10
2418 3946 7.969536 TCAGGTTCATCTTTTGTCTTAGAAG 57.030 36.000 0.00 0.00 0.00 2.85
2419 3947 6.428159 TCAGGTTCATCTTTTGTCTTAGAAGC 59.572 38.462 0.00 0.00 33.60 3.86
2420 3948 6.205464 CAGGTTCATCTTTTGTCTTAGAAGCA 59.795 38.462 0.00 0.00 35.25 3.91
2421 3949 6.205658 AGGTTCATCTTTTGTCTTAGAAGCAC 59.794 38.462 0.00 0.00 35.25 4.40
2424 3952 5.934625 TCATCTTTTGTCTTAGAAGCACCTC 59.065 40.000 0.00 0.00 0.00 3.85
2425 3953 5.290493 TCTTTTGTCTTAGAAGCACCTCA 57.710 39.130 0.00 0.00 0.00 3.86
2426 3954 5.869579 TCTTTTGTCTTAGAAGCACCTCAT 58.130 37.500 0.00 0.00 0.00 2.90
2427 3955 5.702670 TCTTTTGTCTTAGAAGCACCTCATG 59.297 40.000 0.00 0.00 0.00 3.07
2428 3956 4.623932 TTGTCTTAGAAGCACCTCATGT 57.376 40.909 0.00 0.00 0.00 3.21
2433 3961 4.756642 TCTTAGAAGCACCTCATGTGTTTG 59.243 41.667 0.00 0.00 46.80 2.93
2434 3962 2.936202 AGAAGCACCTCATGTGTTTGT 58.064 42.857 0.00 0.00 46.80 2.83
2435 3963 2.620115 AGAAGCACCTCATGTGTTTGTG 59.380 45.455 0.00 0.00 46.80 3.33
2436 3964 2.358898 GAAGCACCTCATGTGTTTGTGT 59.641 45.455 0.00 0.00 46.80 3.72
2437 3965 3.550820 AAGCACCTCATGTGTTTGTGTA 58.449 40.909 0.00 0.00 45.35 2.90
2438 3966 3.565482 AAGCACCTCATGTGTTTGTGTAG 59.435 43.478 0.00 0.00 45.35 2.74
2440 3968 6.381815 AAGCACCTCATGTGTTTGTGTAGTT 61.382 40.000 0.00 0.00 45.35 2.24
2441 3969 4.847633 CACCTCATGTGTTTGTGTAGTTG 58.152 43.478 0.00 0.00 40.26 3.16
2442 3970 4.335315 CACCTCATGTGTTTGTGTAGTTGT 59.665 41.667 0.00 0.00 40.26 3.32
2445 3973 5.525745 CCTCATGTGTTTGTGTAGTTGTACA 59.474 40.000 0.00 0.00 36.78 2.90
2447 3975 7.255104 CCTCATGTGTTTGTGTAGTTGTACATT 60.255 37.037 0.00 0.00 41.29 2.71
2448 3976 7.635423 TCATGTGTTTGTGTAGTTGTACATTC 58.365 34.615 0.00 0.00 41.29 2.67
2449 3977 7.497579 TCATGTGTTTGTGTAGTTGTACATTCT 59.502 33.333 0.00 1.23 41.29 2.40
2450 3978 8.769891 CATGTGTTTGTGTAGTTGTACATTCTA 58.230 33.333 0.00 0.20 41.29 2.10
2451 3979 8.360325 TGTGTTTGTGTAGTTGTACATTCTAG 57.640 34.615 0.00 0.00 41.29 2.43
2453 3981 8.273557 GTGTTTGTGTAGTTGTACATTCTAGTG 58.726 37.037 0.00 0.00 41.29 2.74
2454 3982 7.982919 TGTTTGTGTAGTTGTACATTCTAGTGT 59.017 33.333 0.00 0.00 41.29 3.55
2455 3983 8.823818 GTTTGTGTAGTTGTACATTCTAGTGTT 58.176 33.333 0.00 0.00 41.29 3.32
2456 3984 7.940178 TGTGTAGTTGTACATTCTAGTGTTG 57.060 36.000 0.00 0.00 41.29 3.33
2458 3986 7.650504 TGTGTAGTTGTACATTCTAGTGTTGTC 59.349 37.037 0.00 0.00 41.29 3.18
2459 3987 7.650504 GTGTAGTTGTACATTCTAGTGTTGTCA 59.349 37.037 0.00 0.00 41.29 3.58
2460 3988 7.865889 TGTAGTTGTACATTCTAGTGTTGTCAG 59.134 37.037 0.00 0.00 34.02 3.51
2461 3989 5.696724 AGTTGTACATTCTAGTGTTGTCAGC 59.303 40.000 0.00 0.00 33.62 4.26
2463 3991 5.230182 TGTACATTCTAGTGTTGTCAGCTG 58.770 41.667 7.63 7.63 33.62 4.24
2465 3993 4.708177 ACATTCTAGTGTTGTCAGCTGTT 58.292 39.130 14.67 0.00 0.00 3.16
2466 3994 5.126067 ACATTCTAGTGTTGTCAGCTGTTT 58.874 37.500 14.67 0.00 0.00 2.83
2468 3996 6.202954 ACATTCTAGTGTTGTCAGCTGTTTAC 59.797 38.462 14.67 10.33 0.00 2.01
2469 3997 5.531122 TCTAGTGTTGTCAGCTGTTTACT 57.469 39.130 14.67 13.76 0.00 2.24
2470 3998 5.914033 TCTAGTGTTGTCAGCTGTTTACTT 58.086 37.500 14.67 5.85 0.00 2.24
2473 4001 6.545504 AGTGTTGTCAGCTGTTTACTTATG 57.454 37.500 14.67 0.00 0.00 1.90
2474 4002 5.470098 AGTGTTGTCAGCTGTTTACTTATGG 59.530 40.000 14.67 0.00 0.00 2.74
2475 4003 4.215399 TGTTGTCAGCTGTTTACTTATGGC 59.785 41.667 14.67 0.00 0.00 4.40
2476 4004 4.286297 TGTCAGCTGTTTACTTATGGCT 57.714 40.909 14.67 0.00 0.00 4.75
2477 4005 4.651778 TGTCAGCTGTTTACTTATGGCTT 58.348 39.130 14.67 0.00 0.00 4.35
2479 4007 5.874810 TGTCAGCTGTTTACTTATGGCTTAG 59.125 40.000 14.67 0.00 0.00 2.18
2480 4008 5.294552 GTCAGCTGTTTACTTATGGCTTAGG 59.705 44.000 14.67 0.00 0.00 2.69
2481 4009 4.576463 CAGCTGTTTACTTATGGCTTAGGG 59.424 45.833 5.25 0.00 0.00 3.53
2482 4010 4.227527 AGCTGTTTACTTATGGCTTAGGGT 59.772 41.667 0.00 0.00 0.00 4.34
2483 4011 4.335594 GCTGTTTACTTATGGCTTAGGGTG 59.664 45.833 0.00 0.00 0.00 4.61
2484 4012 5.497474 CTGTTTACTTATGGCTTAGGGTGT 58.503 41.667 0.00 0.00 0.00 4.16
2485 4013 5.883180 TGTTTACTTATGGCTTAGGGTGTT 58.117 37.500 0.00 0.00 0.00 3.32
2488 4016 6.827586 TTACTTATGGCTTAGGGTGTTTTG 57.172 37.500 0.00 0.00 0.00 2.44
2490 4018 2.990740 ATGGCTTAGGGTGTTTTGGA 57.009 45.000 0.00 0.00 0.00 3.53
2491 4019 2.286365 TGGCTTAGGGTGTTTTGGAG 57.714 50.000 0.00 0.00 0.00 3.86
2492 4020 1.203001 TGGCTTAGGGTGTTTTGGAGG 60.203 52.381 0.00 0.00 0.00 4.30
2494 4022 1.545841 CTTAGGGTGTTTTGGAGGCC 58.454 55.000 0.00 0.00 0.00 5.19
2498 4026 2.626780 GGTGTTTTGGAGGCCGAGC 61.627 63.158 0.00 0.00 0.00 5.03
2499 4027 1.600916 GTGTTTTGGAGGCCGAGCT 60.601 57.895 0.00 0.00 0.00 4.09
2500 4028 1.302511 TGTTTTGGAGGCCGAGCTC 60.303 57.895 2.73 2.73 0.00 4.09
2501 4029 2.041115 GTTTTGGAGGCCGAGCTCC 61.041 63.158 8.47 0.00 40.05 4.70
2502 4030 3.268103 TTTTGGAGGCCGAGCTCCC 62.268 63.158 8.47 4.33 38.92 4.30
2503 4031 4.722535 TTGGAGGCCGAGCTCCCT 62.723 66.667 10.98 10.98 38.92 4.20
2504 4032 4.722535 TGGAGGCCGAGCTCCCTT 62.723 66.667 12.26 0.00 38.92 3.95
2505 4033 4.168291 GGAGGCCGAGCTCCCTTG 62.168 72.222 12.26 0.00 33.81 3.61
2506 4034 3.077556 GAGGCCGAGCTCCCTTGA 61.078 66.667 12.26 0.00 0.00 3.02
2507 4035 3.080121 AGGCCGAGCTCCCTTGAG 61.080 66.667 8.47 0.00 41.84 3.02
2508 4036 3.394836 GGCCGAGCTCCCTTGAGT 61.395 66.667 8.47 0.00 40.95 3.41
2509 4037 2.185608 GCCGAGCTCCCTTGAGTC 59.814 66.667 8.47 0.00 40.95 3.36
2511 4039 1.515020 CCGAGCTCCCTTGAGTCTG 59.485 63.158 8.47 0.00 40.95 3.51
2512 4040 0.967887 CCGAGCTCCCTTGAGTCTGA 60.968 60.000 8.47 0.00 40.95 3.27
2515 4043 2.093764 CGAGCTCCCTTGAGTCTGAAAT 60.094 50.000 8.47 0.00 40.95 2.17
2516 4044 3.618507 CGAGCTCCCTTGAGTCTGAAATT 60.619 47.826 8.47 0.00 40.95 1.82
2517 4045 3.938334 GAGCTCCCTTGAGTCTGAAATTC 59.062 47.826 0.87 0.00 40.95 2.17
2520 4048 4.564406 GCTCCCTTGAGTCTGAAATTCTGA 60.564 45.833 0.00 0.00 40.95 3.27
2521 4049 5.555017 CTCCCTTGAGTCTGAAATTCTGAA 58.445 41.667 4.14 0.00 33.70 3.02
2522 4050 5.940617 TCCCTTGAGTCTGAAATTCTGAAA 58.059 37.500 4.14 0.00 0.00 2.69
2523 4051 6.364701 TCCCTTGAGTCTGAAATTCTGAAAA 58.635 36.000 4.14 0.40 0.00 2.29
2524 4052 6.833416 TCCCTTGAGTCTGAAATTCTGAAAAA 59.167 34.615 4.14 0.10 0.00 1.94
2557 4085 8.103305 ACTTATCAGTTTCTAGAAATTGAGCCA 58.897 33.333 33.25 23.34 45.66 4.75
2558 4086 6.998968 ATCAGTTTCTAGAAATTGAGCCAG 57.001 37.500 33.25 14.85 45.66 4.85
2559 4087 6.114187 TCAGTTTCTAGAAATTGAGCCAGA 57.886 37.500 29.37 13.79 40.52 3.86
2560 4088 6.169094 TCAGTTTCTAGAAATTGAGCCAGAG 58.831 40.000 29.37 10.40 40.52 3.35
2562 4090 6.652481 CAGTTTCTAGAAATTGAGCCAGAGAA 59.348 38.462 27.79 0.00 39.46 2.87
2563 4091 7.173907 CAGTTTCTAGAAATTGAGCCAGAGAAA 59.826 37.037 27.79 0.00 39.46 2.52
2564 4092 7.174080 AGTTTCTAGAAATTGAGCCAGAGAAAC 59.826 37.037 20.41 13.60 46.04 2.78
2566 4094 6.715280 TCTAGAAATTGAGCCAGAGAAACAT 58.285 36.000 0.00 0.00 0.00 2.71
2567 4095 5.893897 AGAAATTGAGCCAGAGAAACATC 57.106 39.130 0.00 0.00 0.00 3.06
2568 4096 4.704057 AGAAATTGAGCCAGAGAAACATCC 59.296 41.667 0.00 0.00 0.00 3.51
2570 4098 3.340814 TTGAGCCAGAGAAACATCCTC 57.659 47.619 0.00 0.00 0.00 3.71
2572 4100 2.842496 TGAGCCAGAGAAACATCCTCAT 59.158 45.455 0.00 0.00 33.25 2.90
2573 4101 3.265221 TGAGCCAGAGAAACATCCTCATT 59.735 43.478 0.00 0.00 33.25 2.57
2574 4102 3.618351 AGCCAGAGAAACATCCTCATTG 58.382 45.455 0.00 0.00 33.25 2.82
2575 4103 2.686915 GCCAGAGAAACATCCTCATTGG 59.313 50.000 0.00 0.00 32.33 3.16
2577 4105 3.693085 CCAGAGAAACATCCTCATTGGTG 59.307 47.826 0.00 0.00 37.07 4.17
2578 4106 3.693085 CAGAGAAACATCCTCATTGGTGG 59.307 47.826 0.00 0.00 37.07 4.61
2579 4107 3.588842 AGAGAAACATCCTCATTGGTGGA 59.411 43.478 0.00 2.66 40.71 4.02
2580 4108 3.944015 GAGAAACATCCTCATTGGTGGAG 59.056 47.826 5.75 0.00 39.86 3.86
2581 4109 3.588842 AGAAACATCCTCATTGGTGGAGA 59.411 43.478 0.00 0.00 39.86 3.71
2582 4110 4.043310 AGAAACATCCTCATTGGTGGAGAA 59.957 41.667 0.00 0.00 39.86 2.87
2583 4111 3.641434 ACATCCTCATTGGTGGAGAAG 57.359 47.619 0.00 2.28 39.86 2.85
2584 4112 2.240667 ACATCCTCATTGGTGGAGAAGG 59.759 50.000 0.00 0.00 39.86 3.46
2585 4113 2.342406 TCCTCATTGGTGGAGAAGGA 57.658 50.000 0.00 0.00 37.07 3.36
2586 4114 2.191400 TCCTCATTGGTGGAGAAGGAG 58.809 52.381 0.00 0.00 37.07 3.69
2587 4115 2.191400 CCTCATTGGTGGAGAAGGAGA 58.809 52.381 0.00 0.00 33.95 3.71
2588 4116 2.573462 CCTCATTGGTGGAGAAGGAGAA 59.427 50.000 0.00 0.00 33.95 2.87
2589 4117 3.604582 CTCATTGGTGGAGAAGGAGAAC 58.395 50.000 0.00 0.00 33.95 3.01
2590 4118 2.978978 TCATTGGTGGAGAAGGAGAACA 59.021 45.455 0.00 0.00 0.00 3.18
2591 4119 3.394274 TCATTGGTGGAGAAGGAGAACAA 59.606 43.478 0.00 0.00 0.00 2.83
2598 4126 5.501156 GTGGAGAAGGAGAACAAATATGGT 58.499 41.667 0.00 0.00 0.00 3.55
2600 4128 7.283329 GTGGAGAAGGAGAACAAATATGGTAT 58.717 38.462 0.00 0.00 0.00 2.73
2603 4131 8.652290 GGAGAAGGAGAACAAATATGGTATACT 58.348 37.037 2.25 0.00 26.61 2.12
2608 4136 9.845214 AGGAGAACAAATATGGTATACTATCCT 57.155 33.333 4.82 1.07 22.58 3.24
2614 4142 9.860650 ACAAATATGGTATACTATCCTGCAAAA 57.139 29.630 4.82 0.00 0.00 2.44
2618 4146 7.986085 ATGGTATACTATCCTGCAAAATCAC 57.014 36.000 2.25 0.00 0.00 3.06
2620 4148 5.705905 GGTATACTATCCTGCAAAATCACCC 59.294 44.000 2.25 0.00 0.00 4.61
2621 4149 3.018423 ACTATCCTGCAAAATCACCCC 57.982 47.619 0.00 0.00 0.00 4.95
2623 4151 1.560505 ATCCTGCAAAATCACCCCAC 58.439 50.000 0.00 0.00 0.00 4.61
2624 4152 0.482446 TCCTGCAAAATCACCCCACT 59.518 50.000 0.00 0.00 0.00 4.00
2625 4153 1.707989 TCCTGCAAAATCACCCCACTA 59.292 47.619 0.00 0.00 0.00 2.74
2626 4154 2.311542 TCCTGCAAAATCACCCCACTAT 59.688 45.455 0.00 0.00 0.00 2.12
2627 4155 2.689983 CCTGCAAAATCACCCCACTATC 59.310 50.000 0.00 0.00 0.00 2.08
2630 4158 3.096092 GCAAAATCACCCCACTATCCAA 58.904 45.455 0.00 0.00 0.00 3.53
2632 4160 3.669939 AAATCACCCCACTATCCAAGG 57.330 47.619 0.00 0.00 0.00 3.61
2633 4161 0.846693 ATCACCCCACTATCCAAGGC 59.153 55.000 0.00 0.00 0.00 4.35
2635 4163 0.552848 CACCCCACTATCCAAGGCAT 59.447 55.000 0.00 0.00 0.00 4.40
2636 4164 0.846693 ACCCCACTATCCAAGGCATC 59.153 55.000 0.00 0.00 0.00 3.91
2637 4165 1.143813 CCCCACTATCCAAGGCATCT 58.856 55.000 0.00 0.00 0.00 2.90
2638 4166 1.496429 CCCCACTATCCAAGGCATCTT 59.504 52.381 0.00 0.00 0.00 2.40
2639 4167 2.091665 CCCCACTATCCAAGGCATCTTT 60.092 50.000 0.00 0.00 0.00 2.52
2640 4168 3.217626 CCCACTATCCAAGGCATCTTTC 58.782 50.000 0.00 0.00 0.00 2.62
2641 4169 3.117738 CCCACTATCCAAGGCATCTTTCT 60.118 47.826 0.00 0.00 0.00 2.52
2643 4171 5.303971 CCACTATCCAAGGCATCTTTCTAG 58.696 45.833 0.00 0.00 0.00 2.43
2644 4172 5.070981 CCACTATCCAAGGCATCTTTCTAGA 59.929 44.000 0.00 0.00 34.21 2.43
2645 4173 6.222389 CACTATCCAAGGCATCTTTCTAGAG 58.778 44.000 0.00 0.00 32.92 2.43
2646 4174 3.550437 TCCAAGGCATCTTTCTAGAGC 57.450 47.619 0.00 0.00 32.92 4.09
2647 4175 2.840038 TCCAAGGCATCTTTCTAGAGCA 59.160 45.455 3.63 0.00 32.92 4.26
2649 4177 3.118482 CCAAGGCATCTTTCTAGAGCAGA 60.118 47.826 6.25 6.25 32.92 4.26
2650 4178 4.511527 CAAGGCATCTTTCTAGAGCAGAA 58.488 43.478 7.59 0.00 41.66 3.02
2651 4179 5.124645 CAAGGCATCTTTCTAGAGCAGAAT 58.875 41.667 7.59 0.00 42.88 2.40
2653 4181 3.814283 GGCATCTTTCTAGAGCAGAATGG 59.186 47.826 7.59 3.39 42.88 3.16
2669 4197 1.455849 TGGTTTCACCAGAGCCAGG 59.544 57.895 0.00 0.00 44.79 4.45
2670 4198 1.059584 TGGTTTCACCAGAGCCAGGA 61.060 55.000 0.00 0.00 44.79 3.86
2671 4199 0.110486 GGTTTCACCAGAGCCAGGAA 59.890 55.000 0.00 0.00 38.42 3.36
2672 4200 1.272147 GGTTTCACCAGAGCCAGGAAT 60.272 52.381 0.00 0.00 38.42 3.01
2673 4201 2.026262 GGTTTCACCAGAGCCAGGAATA 60.026 50.000 0.00 0.00 38.42 1.75
2674 4202 3.010420 GTTTCACCAGAGCCAGGAATAC 58.990 50.000 0.00 0.00 0.00 1.89
2675 4203 1.951209 TCACCAGAGCCAGGAATACA 58.049 50.000 0.00 0.00 0.00 2.29
2676 4204 2.481441 TCACCAGAGCCAGGAATACAT 58.519 47.619 0.00 0.00 0.00 2.29
2679 4207 2.092753 ACCAGAGCCAGGAATACATGTG 60.093 50.000 9.11 0.00 0.00 3.21
2680 4208 2.569059 CAGAGCCAGGAATACATGTGG 58.431 52.381 9.11 0.39 0.00 4.17
2682 4210 2.024918 GCCAGGAATACATGTGGCG 58.975 57.895 9.11 0.00 45.73 5.69
2684 4212 1.815408 GCCAGGAATACATGTGGCGAT 60.815 52.381 9.11 0.00 45.73 4.58
2685 4213 2.146342 CCAGGAATACATGTGGCGATC 58.854 52.381 9.11 0.00 0.00 3.69
2686 4214 2.146342 CAGGAATACATGTGGCGATCC 58.854 52.381 9.11 8.63 0.00 3.36
2687 4215 1.072331 AGGAATACATGTGGCGATCCC 59.928 52.381 9.11 0.00 0.00 3.85
2688 4216 1.523758 GAATACATGTGGCGATCCCC 58.476 55.000 9.11 0.00 0.00 4.81
2689 4217 0.110486 AATACATGTGGCGATCCCCC 59.890 55.000 9.11 0.00 0.00 5.40
2690 4218 0.768221 ATACATGTGGCGATCCCCCT 60.768 55.000 9.11 0.00 0.00 4.79
2691 4219 1.695114 TACATGTGGCGATCCCCCTG 61.695 60.000 9.11 0.00 0.00 4.45
2693 4221 1.383943 ATGTGGCGATCCCCCTGTA 60.384 57.895 0.00 0.00 0.00 2.74
2695 4223 1.760875 GTGGCGATCCCCCTGTAGA 60.761 63.158 0.00 0.00 0.00 2.59
2696 4224 1.122019 GTGGCGATCCCCCTGTAGAT 61.122 60.000 0.00 0.00 0.00 1.98
2697 4225 1.121407 TGGCGATCCCCCTGTAGATG 61.121 60.000 0.00 0.00 0.00 2.90
2698 4226 1.122019 GGCGATCCCCCTGTAGATGT 61.122 60.000 0.00 0.00 0.00 3.06
2699 4227 0.318762 GCGATCCCCCTGTAGATGTC 59.681 60.000 0.00 0.00 0.00 3.06
2700 4228 0.969894 CGATCCCCCTGTAGATGTCC 59.030 60.000 0.00 0.00 0.00 4.02
2701 4229 1.757764 CGATCCCCCTGTAGATGTCCA 60.758 57.143 0.00 0.00 0.00 4.02
2702 4230 1.974236 GATCCCCCTGTAGATGTCCAG 59.026 57.143 0.00 0.00 0.00 3.86
2711 4239 3.506398 TGTAGATGTCCAGGAGAACACA 58.494 45.455 0.00 0.00 0.00 3.72
2714 4242 4.647564 AGATGTCCAGGAGAACACATTT 57.352 40.909 0.00 0.00 29.43 2.32
2715 4243 4.990526 AGATGTCCAGGAGAACACATTTT 58.009 39.130 0.00 0.00 29.43 1.82
2716 4244 5.388654 AGATGTCCAGGAGAACACATTTTT 58.611 37.500 0.00 0.00 29.43 1.94
2717 4245 5.474876 AGATGTCCAGGAGAACACATTTTTC 59.525 40.000 0.00 0.00 29.43 2.29
2718 4246 3.888930 TGTCCAGGAGAACACATTTTTCC 59.111 43.478 0.00 0.00 0.00 3.13
2720 4248 3.888930 TCCAGGAGAACACATTTTTCCAC 59.111 43.478 0.00 0.00 0.00 4.02
2723 4251 4.099266 CAGGAGAACACATTTTTCCACCAA 59.901 41.667 0.00 0.00 0.00 3.67
2725 4253 5.188751 AGGAGAACACATTTTTCCACCAAAA 59.811 36.000 0.00 0.00 31.73 2.44
2726 4254 5.523552 GGAGAACACATTTTTCCACCAAAAG 59.476 40.000 0.00 0.00 35.34 2.27
2727 4255 5.427378 AGAACACATTTTTCCACCAAAAGG 58.573 37.500 0.00 0.00 35.34 3.11
2728 4256 5.188751 AGAACACATTTTTCCACCAAAAGGA 59.811 36.000 0.00 0.00 35.34 3.36
2729 4257 5.022282 ACACATTTTTCCACCAAAAGGAG 57.978 39.130 0.00 0.00 35.34 3.69
2731 4259 5.045942 ACACATTTTTCCACCAAAAGGAGTT 60.046 36.000 0.00 0.00 35.34 3.01
2732 4260 5.294060 CACATTTTTCCACCAAAAGGAGTTG 59.706 40.000 0.00 0.00 35.34 3.16
2733 4261 3.535280 TTTTCCACCAAAAGGAGTTGC 57.465 42.857 0.00 0.00 36.33 4.17
2734 4262 2.151502 TTCCACCAAAAGGAGTTGCA 57.848 45.000 0.00 0.00 36.33 4.08
2735 4263 1.691196 TCCACCAAAAGGAGTTGCAG 58.309 50.000 0.00 0.00 0.00 4.41
2736 4264 0.675633 CCACCAAAAGGAGTTGCAGG 59.324 55.000 0.00 0.00 0.00 4.85
2737 4265 0.675633 CACCAAAAGGAGTTGCAGGG 59.324 55.000 0.00 0.00 0.00 4.45
2738 4266 0.555769 ACCAAAAGGAGTTGCAGGGA 59.444 50.000 0.00 0.00 0.00 4.20
2740 4268 1.547372 CCAAAAGGAGTTGCAGGGATG 59.453 52.381 0.00 0.00 0.00 3.51
2741 4269 1.067354 CAAAAGGAGTTGCAGGGATGC 60.067 52.381 0.00 0.00 0.00 3.91
2742 4270 0.112995 AAAGGAGTTGCAGGGATGCA 59.887 50.000 0.00 0.00 43.81 3.96
2757 4285 3.142838 GCAATGCATGCGGGGTCT 61.143 61.111 14.09 0.00 46.87 3.85
2758 4286 2.802792 CAATGCATGCGGGGTCTG 59.197 61.111 14.09 0.00 0.00 3.51
2760 4288 1.105167 CAATGCATGCGGGGTCTGAT 61.105 55.000 14.09 0.00 0.00 2.90
2764 4622 0.035317 GCATGCGGGGTCTGATCATA 59.965 55.000 0.00 0.00 0.00 2.15
2787 4645 9.528018 CATAATATTTAAACCACAACATGACCC 57.472 33.333 0.00 0.00 0.00 4.46
2788 4646 7.546250 AATATTTAAACCACAACATGACCCA 57.454 32.000 0.00 0.00 0.00 4.51
2789 4647 5.878406 ATTTAAACCACAACATGACCCAA 57.122 34.783 0.00 0.00 0.00 4.12
2803 4666 2.846206 TGACCCAAGACATCAGCCTTAT 59.154 45.455 0.00 0.00 0.00 1.73
2806 4669 2.947652 CCCAAGACATCAGCCTTATGTG 59.052 50.000 0.00 0.00 37.69 3.21
2815 4678 7.776969 AGACATCAGCCTTATGTGTGAATTTAT 59.223 33.333 0.00 0.00 37.69 1.40
2857 4720 6.752168 AGAGCTTAATTTTGCACTTTGATGT 58.248 32.000 0.00 0.00 0.00 3.06
2872 4735 4.817318 TTGATGTTTTAAATCCCCAGCC 57.183 40.909 0.00 0.00 0.00 4.85
2890 4753 1.377333 CCCCCTTTCTGCTTCGGTC 60.377 63.158 0.00 0.00 0.00 4.79
2922 4785 1.718757 CCCAGGCAGCTAACGAATGC 61.719 60.000 0.00 0.00 39.25 3.56
2934 4797 3.474823 CGAATGCGTACAAGCTTCG 57.525 52.632 0.00 0.00 39.38 3.79
2940 4803 1.917921 CGTACAAGCTTCGCGATCC 59.082 57.895 10.88 3.67 0.00 3.36
2942 4805 1.571919 GTACAAGCTTCGCGATCCAT 58.428 50.000 10.88 0.00 0.00 3.41
2943 4806 2.739292 GTACAAGCTTCGCGATCCATA 58.261 47.619 10.88 0.00 0.00 2.74
2955 4818 3.744660 GCGATCCATAACCTTTCTCCAT 58.255 45.455 0.00 0.00 0.00 3.41
2998 4861 4.305989 TCAAACAACTCAATCACCTTGC 57.694 40.909 0.00 0.00 34.66 4.01
3005 4868 2.158475 ACTCAATCACCTTGCTGGGAAA 60.158 45.455 2.69 0.00 41.11 3.13
3012 4875 2.035066 CACCTTGCTGGGAAACTTTGAG 59.965 50.000 2.69 0.00 41.11 3.02
3039 4902 3.508793 CACATGGCAAATGAAAGGAGAGT 59.491 43.478 5.69 0.00 0.00 3.24
3040 4903 4.021719 CACATGGCAAATGAAAGGAGAGTT 60.022 41.667 5.69 0.00 0.00 3.01
3041 4904 5.183713 CACATGGCAAATGAAAGGAGAGTTA 59.816 40.000 5.69 0.00 0.00 2.24
3042 4905 5.774690 ACATGGCAAATGAAAGGAGAGTTAA 59.225 36.000 5.69 0.00 0.00 2.01
3043 4906 6.438425 ACATGGCAAATGAAAGGAGAGTTAAT 59.562 34.615 5.69 0.00 0.00 1.40
3044 4907 6.271488 TGGCAAATGAAAGGAGAGTTAATG 57.729 37.500 0.00 0.00 0.00 1.90
3045 4908 6.009589 TGGCAAATGAAAGGAGAGTTAATGA 58.990 36.000 0.00 0.00 0.00 2.57
3046 4909 6.664816 TGGCAAATGAAAGGAGAGTTAATGAT 59.335 34.615 0.00 0.00 0.00 2.45
3047 4910 7.148018 TGGCAAATGAAAGGAGAGTTAATGATC 60.148 37.037 0.00 0.00 0.00 2.92
3048 4911 7.067981 GGCAAATGAAAGGAGAGTTAATGATCT 59.932 37.037 0.00 0.00 0.00 2.75
3049 4912 8.465201 GCAAATGAAAGGAGAGTTAATGATCTT 58.535 33.333 0.00 0.00 0.00 2.40
3058 4921 9.995003 AGGAGAGTTAATGATCTTATTAAGCTG 57.005 33.333 0.00 0.00 34.25 4.24
3059 4922 9.988815 GGAGAGTTAATGATCTTATTAAGCTGA 57.011 33.333 0.00 0.00 34.25 4.26
3067 4930 9.709495 AATGATCTTATTAAGCTGATGAGAGAC 57.291 33.333 9.64 7.51 0.00 3.36
3068 4931 7.665690 TGATCTTATTAAGCTGATGAGAGACC 58.334 38.462 9.64 4.32 0.00 3.85
3069 4932 7.288621 TGATCTTATTAAGCTGATGAGAGACCA 59.711 37.037 9.64 6.08 0.00 4.02
3070 4933 7.423844 TCTTATTAAGCTGATGAGAGACCAA 57.576 36.000 0.00 0.00 0.00 3.67
3071 4934 8.027524 TCTTATTAAGCTGATGAGAGACCAAT 57.972 34.615 0.00 0.00 0.00 3.16
3072 4935 8.147058 TCTTATTAAGCTGATGAGAGACCAATC 58.853 37.037 0.00 0.00 0.00 2.67
3073 4936 5.946942 TTAAGCTGATGAGAGACCAATCT 57.053 39.130 0.00 0.00 38.15 2.40
3082 4945 3.067011 AGACCAATCTCACACCCGA 57.933 52.632 0.00 0.00 0.00 5.14
3083 4946 1.573108 AGACCAATCTCACACCCGAT 58.427 50.000 0.00 0.00 0.00 4.18
3084 4947 1.208052 AGACCAATCTCACACCCGATG 59.792 52.381 0.00 0.00 0.00 3.84
3085 4948 0.392998 ACCAATCTCACACCCGATGC 60.393 55.000 0.00 0.00 0.00 3.91
3086 4949 0.107508 CCAATCTCACACCCGATGCT 60.108 55.000 0.00 0.00 0.00 3.79
3087 4950 1.293924 CAATCTCACACCCGATGCTC 58.706 55.000 0.00 0.00 0.00 4.26
3088 4951 0.179000 AATCTCACACCCGATGCTCC 59.821 55.000 0.00 0.00 0.00 4.70
3089 4952 0.977627 ATCTCACACCCGATGCTCCA 60.978 55.000 0.00 0.00 0.00 3.86
3090 4953 0.977627 TCTCACACCCGATGCTCCAT 60.978 55.000 0.00 0.00 0.00 3.41
3091 4954 0.107508 CTCACACCCGATGCTCCATT 60.108 55.000 0.00 0.00 0.00 3.16
3092 4955 0.392863 TCACACCCGATGCTCCATTG 60.393 55.000 0.00 0.00 0.00 2.82
3093 4956 1.077501 ACACCCGATGCTCCATTGG 60.078 57.895 0.00 0.00 43.25 3.16
3094 4957 1.224315 CACCCGATGCTCCATTGGA 59.776 57.895 12.12 5.05 45.73 3.53
3095 4958 0.394216 CACCCGATGCTCCATTGGAA 60.394 55.000 6.88 0.00 45.73 3.53
3096 4959 0.107017 ACCCGATGCTCCATTGGAAG 60.107 55.000 6.88 2.61 45.73 3.46
3097 4960 0.820891 CCCGATGCTCCATTGGAAGG 60.821 60.000 6.88 5.53 45.73 3.46
3098 4961 1.450531 CCGATGCTCCATTGGAAGGC 61.451 60.000 6.88 8.34 45.73 4.35
3099 4962 0.749091 CGATGCTCCATTGGAAGGCA 60.749 55.000 18.69 18.69 37.31 4.75
3100 4963 1.700955 GATGCTCCATTGGAAGGCAT 58.299 50.000 24.73 24.73 43.27 4.40
3101 4964 1.340248 GATGCTCCATTGGAAGGCATG 59.660 52.381 27.84 9.46 41.54 4.06
3102 4965 0.332293 TGCTCCATTGGAAGGCATGA 59.668 50.000 13.94 0.00 29.79 3.07
3103 4966 1.272592 TGCTCCATTGGAAGGCATGAA 60.273 47.619 13.94 0.00 29.79 2.57
3104 4967 2.037144 GCTCCATTGGAAGGCATGAAT 58.963 47.619 6.88 0.00 0.00 2.57
3105 4968 2.433239 GCTCCATTGGAAGGCATGAATT 59.567 45.455 6.88 0.00 0.00 2.17
3106 4969 3.492137 GCTCCATTGGAAGGCATGAATTC 60.492 47.826 6.88 0.00 0.00 2.17
3107 4970 3.702548 CTCCATTGGAAGGCATGAATTCA 59.297 43.478 11.26 11.26 0.00 2.57
3108 4971 4.095211 TCCATTGGAAGGCATGAATTCAA 58.905 39.130 13.09 0.00 0.00 2.69
3109 4972 4.531339 TCCATTGGAAGGCATGAATTCAAA 59.469 37.500 13.09 0.00 0.00 2.69
3110 4973 5.190132 TCCATTGGAAGGCATGAATTCAAAT 59.810 36.000 13.09 2.13 30.71 2.32
3111 4974 5.883673 CCATTGGAAGGCATGAATTCAAATT 59.116 36.000 13.09 4.97 28.58 1.82
3112 4975 6.376018 CCATTGGAAGGCATGAATTCAAATTT 59.624 34.615 13.09 5.01 28.58 1.82
3113 4976 7.553402 CCATTGGAAGGCATGAATTCAAATTTA 59.447 33.333 13.09 0.00 28.58 1.40
3114 4977 9.116067 CATTGGAAGGCATGAATTCAAATTTAT 57.884 29.630 13.09 0.00 28.58 1.40
3115 4978 8.721019 TTGGAAGGCATGAATTCAAATTTATC 57.279 30.769 13.09 7.03 0.00 1.75
3116 4979 7.849160 TGGAAGGCATGAATTCAAATTTATCA 58.151 30.769 13.09 4.45 0.00 2.15
3117 4980 8.319881 TGGAAGGCATGAATTCAAATTTATCAA 58.680 29.630 13.09 0.00 0.00 2.57
3118 4981 9.165035 GGAAGGCATGAATTCAAATTTATCAAA 57.835 29.630 13.09 0.00 0.00 2.69
3121 4984 9.893634 AGGCATGAATTCAAATTTATCAAATCA 57.106 25.926 13.09 0.00 0.00 2.57
3134 4997 9.643693 AATTTATCAAATCATCTGGAACAACAC 57.356 29.630 0.00 0.00 38.70 3.32
3135 4998 8.408043 TTTATCAAATCATCTGGAACAACACT 57.592 30.769 0.00 0.00 38.70 3.55
3136 4999 6.906157 ATCAAATCATCTGGAACAACACTT 57.094 33.333 0.00 0.00 38.70 3.16
3137 5000 6.317789 TCAAATCATCTGGAACAACACTTC 57.682 37.500 0.00 0.00 38.70 3.01
3138 5001 5.241506 TCAAATCATCTGGAACAACACTTCC 59.758 40.000 0.00 0.00 38.70 3.46
3139 5002 4.647564 ATCATCTGGAACAACACTTCCT 57.352 40.909 0.00 0.00 40.56 3.36
3140 5003 5.762179 ATCATCTGGAACAACACTTCCTA 57.238 39.130 0.00 0.00 40.56 2.94
3141 5004 5.560722 TCATCTGGAACAACACTTCCTAA 57.439 39.130 0.00 0.00 40.56 2.69
3142 5005 6.126863 TCATCTGGAACAACACTTCCTAAT 57.873 37.500 0.00 0.00 40.56 1.73
3143 5006 5.939883 TCATCTGGAACAACACTTCCTAATG 59.060 40.000 0.00 4.01 40.56 1.90
3144 5007 5.560722 TCTGGAACAACACTTCCTAATGA 57.439 39.130 0.00 0.00 40.56 2.57
3145 5008 5.935945 TCTGGAACAACACTTCCTAATGAA 58.064 37.500 0.00 0.00 40.56 2.57
3146 5009 5.763204 TCTGGAACAACACTTCCTAATGAAC 59.237 40.000 0.00 0.00 40.56 3.18
3147 5010 4.513692 TGGAACAACACTTCCTAATGAACG 59.486 41.667 0.00 0.00 40.56 3.95
3148 5011 4.753107 GGAACAACACTTCCTAATGAACGA 59.247 41.667 0.00 0.00 37.35 3.85
3149 5012 5.237779 GGAACAACACTTCCTAATGAACGAA 59.762 40.000 0.00 0.00 37.35 3.85
3150 5013 6.072673 GGAACAACACTTCCTAATGAACGAAT 60.073 38.462 0.00 0.00 37.35 3.34
3151 5014 6.241207 ACAACACTTCCTAATGAACGAATG 57.759 37.500 0.00 0.00 0.00 2.67
3152 5015 5.995282 ACAACACTTCCTAATGAACGAATGA 59.005 36.000 0.00 0.00 0.00 2.57
3153 5016 6.655003 ACAACACTTCCTAATGAACGAATGAT 59.345 34.615 0.00 0.00 0.00 2.45
3154 5017 6.910536 ACACTTCCTAATGAACGAATGATC 57.089 37.500 0.00 0.00 0.00 2.92
3155 5018 6.406370 ACACTTCCTAATGAACGAATGATCA 58.594 36.000 0.00 0.00 0.00 2.92
3156 5019 6.878923 ACACTTCCTAATGAACGAATGATCAA 59.121 34.615 0.00 0.00 30.09 2.57
3157 5020 7.390440 ACACTTCCTAATGAACGAATGATCAAA 59.610 33.333 0.00 0.00 30.09 2.69
3158 5021 8.236586 CACTTCCTAATGAACGAATGATCAAAA 58.763 33.333 0.00 0.00 30.09 2.44
3159 5022 8.960591 ACTTCCTAATGAACGAATGATCAAAAT 58.039 29.630 0.00 0.00 30.09 1.82
3160 5023 9.443283 CTTCCTAATGAACGAATGATCAAAATC 57.557 33.333 0.00 0.00 30.09 2.17
3161 5024 8.504812 TCCTAATGAACGAATGATCAAAATCA 57.495 30.769 0.00 1.04 45.73 2.57
3162 5025 8.397906 TCCTAATGAACGAATGATCAAAATCAC 58.602 33.333 0.00 0.00 44.51 3.06
3163 5026 7.645340 CCTAATGAACGAATGATCAAAATCACC 59.355 37.037 0.00 0.00 44.51 4.02
3164 5027 5.309323 TGAACGAATGATCAAAATCACCC 57.691 39.130 0.00 0.00 44.51 4.61
3165 5028 5.009631 TGAACGAATGATCAAAATCACCCT 58.990 37.500 0.00 0.00 44.51 4.34
3166 5029 5.476599 TGAACGAATGATCAAAATCACCCTT 59.523 36.000 0.00 0.00 44.51 3.95
3167 5030 5.567138 ACGAATGATCAAAATCACCCTTC 57.433 39.130 0.00 0.00 44.51 3.46
3168 5031 5.256474 ACGAATGATCAAAATCACCCTTCT 58.744 37.500 0.00 0.00 44.51 2.85
3169 5032 5.711976 ACGAATGATCAAAATCACCCTTCTT 59.288 36.000 0.00 0.00 44.51 2.52
3170 5033 6.884295 ACGAATGATCAAAATCACCCTTCTTA 59.116 34.615 0.00 0.00 44.51 2.10
3171 5034 7.066284 ACGAATGATCAAAATCACCCTTCTTAG 59.934 37.037 0.00 0.00 44.51 2.18
3172 5035 7.066284 CGAATGATCAAAATCACCCTTCTTAGT 59.934 37.037 0.00 0.00 44.51 2.24
3173 5036 8.655935 AATGATCAAAATCACCCTTCTTAGTT 57.344 30.769 0.00 0.00 44.51 2.24
3174 5037 8.655935 ATGATCAAAATCACCCTTCTTAGTTT 57.344 30.769 0.00 0.00 44.51 2.66
3175 5038 9.753674 ATGATCAAAATCACCCTTCTTAGTTTA 57.246 29.630 0.00 0.00 44.51 2.01
3176 5039 9.753674 TGATCAAAATCACCCTTCTTAGTTTAT 57.246 29.630 0.00 0.00 36.98 1.40
3179 5042 8.303876 TCAAAATCACCCTTCTTAGTTTATTGC 58.696 33.333 0.00 0.00 0.00 3.56
3180 5043 7.775053 AAATCACCCTTCTTAGTTTATTGCA 57.225 32.000 0.00 0.00 0.00 4.08
3181 5044 7.775053 AATCACCCTTCTTAGTTTATTGCAA 57.225 32.000 0.00 0.00 0.00 4.08
3182 5045 7.775053 ATCACCCTTCTTAGTTTATTGCAAA 57.225 32.000 1.71 0.00 0.00 3.68
3183 5046 6.977213 TCACCCTTCTTAGTTTATTGCAAAC 58.023 36.000 1.71 0.00 0.00 2.93
3184 5047 6.547880 TCACCCTTCTTAGTTTATTGCAAACA 59.452 34.615 1.71 0.00 32.81 2.83
3185 5048 7.068839 TCACCCTTCTTAGTTTATTGCAAACAA 59.931 33.333 1.71 0.00 40.87 2.83
3186 5049 7.708752 CACCCTTCTTAGTTTATTGCAAACAAA 59.291 33.333 1.71 4.25 39.77 2.83
3187 5050 7.709182 ACCCTTCTTAGTTTATTGCAAACAAAC 59.291 33.333 22.83 22.83 39.77 2.93
3188 5051 7.708752 CCCTTCTTAGTTTATTGCAAACAAACA 59.291 33.333 27.89 17.60 39.77 2.83
3189 5052 9.092876 CCTTCTTAGTTTATTGCAAACAAACAA 57.907 29.630 27.89 21.17 39.77 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 7.870445 ACAATGCAAACCGAATTACTAAAATGT 59.130 29.630 0.00 0.00 0.00 2.71
18 19 7.903995 ATAATTTGAACAATGCAAACCGAAT 57.096 28.000 0.00 0.00 37.98 3.34
47 48 8.471457 CGCTTAAAATTACATTGAAATCCATCG 58.529 33.333 0.00 0.00 0.00 3.84
136 137 7.125204 AGACTAGTACAAACATGGGCACTTATA 59.875 37.037 0.00 0.00 0.00 0.98
176 177 4.989168 CACACTGGTAACCTTCTACAGTTC 59.011 45.833 0.00 0.00 0.00 3.01
425 449 8.727149 TGAGAGAAATAGATTAATGGGGTTCAT 58.273 33.333 0.00 0.00 37.79 2.57
496 520 1.596752 TTGGCATGCTCGTCGTGTT 60.597 52.632 18.92 0.00 34.19 3.32
500 524 1.061411 CATGTTGGCATGCTCGTCG 59.939 57.895 18.92 0.00 44.87 5.12
509 533 5.876929 GGTCTTTGACTATGCATGTTGGCA 61.877 45.833 10.16 4.99 39.32 4.92
570 596 8.553696 CCTAATATGCCGAGTAAATAAAAACGT 58.446 33.333 0.00 0.00 0.00 3.99
663 689 5.916318 TGAATCCAATGGTATTGATTTGGC 58.084 37.500 0.00 0.00 38.78 4.52
771 1634 9.525409 GCATATTAGCTTTGAATGAAGTCAAAT 57.475 29.630 6.40 0.00 44.38 2.32
889 1756 0.324943 TCTAGCCCAGCTGTGGTTTC 59.675 55.000 13.81 1.55 43.23 2.78
906 1773 2.091665 CAGGCCCCCAGATTGTTATTCT 60.092 50.000 0.00 0.00 0.00 2.40
951 1818 1.526917 CGCTAGGAAATGGGCCAGG 60.527 63.158 13.78 0.00 0.00 4.45
978 1845 4.875713 GCGCACCGGGGAATGGAT 62.876 66.667 8.67 0.00 0.00 3.41
1061 1930 2.904866 CGGCGAGAGGAGAGAGGG 60.905 72.222 0.00 0.00 0.00 4.30
1099 1968 1.153349 GGAGAATGACGGGACCAGC 60.153 63.158 0.00 0.00 0.00 4.85
1184 2056 0.470766 ACGTAGGAGATCTCGGAGCT 59.529 55.000 16.46 10.12 0.00 4.09
1260 2323 2.602878 GAGATCACGTGCGGTAGAAAA 58.397 47.619 11.67 0.00 0.00 2.29
1329 2392 2.363795 TCCTCCACGGCGAAGGAT 60.364 61.111 21.81 0.00 34.26 3.24
1554 2623 0.467384 CGGAGCAGATGAATCCCAGT 59.533 55.000 0.00 0.00 0.00 4.00
1699 2768 3.118261 TCAGAAAGCACAGAAACCAGAGT 60.118 43.478 0.00 0.00 0.00 3.24
1727 2797 1.539827 TCGAGATCAGTGACAGCGAAA 59.460 47.619 9.70 0.00 0.00 3.46
1736 2806 1.588403 CTGCGGCTCGAGATCAGTG 60.588 63.158 18.75 0.00 0.00 3.66
1742 2812 4.135153 GCTTCCTGCGGCTCGAGA 62.135 66.667 18.75 0.00 0.00 4.04
1877 2947 1.040646 TTCGACTGTCTTCAGCCACT 58.959 50.000 6.21 0.00 44.77 4.00
1993 3063 2.365617 ACTCACAACATTGTCTCCTCGT 59.634 45.455 0.00 0.00 39.91 4.18
2030 3100 5.902613 TGTTTATGGCTCATTTCTGAAGG 57.097 39.130 0.00 0.00 0.00 3.46
2052 3215 9.762381 TTGTTGGTTATTATTACCTCCTCAAAT 57.238 29.630 2.02 0.00 36.60 2.32
2056 3219 7.996644 TGGATTGTTGGTTATTATTACCTCCTC 59.003 37.037 2.02 0.00 36.60 3.71
2057 3220 7.878495 TGGATTGTTGGTTATTATTACCTCCT 58.122 34.615 2.02 0.00 36.60 3.69
2058 3221 8.706322 ATGGATTGTTGGTTATTATTACCTCC 57.294 34.615 2.02 1.15 36.60 4.30
2066 3229 7.615365 AGCTTGAAGATGGATTGTTGGTTATTA 59.385 33.333 0.00 0.00 0.00 0.98
2068 3231 5.954150 AGCTTGAAGATGGATTGTTGGTTAT 59.046 36.000 0.00 0.00 0.00 1.89
2069 3232 5.183713 CAGCTTGAAGATGGATTGTTGGTTA 59.816 40.000 1.85 0.00 0.00 2.85
2072 3235 4.106029 CAGCTTGAAGATGGATTGTTGG 57.894 45.455 1.85 0.00 0.00 3.77
2108 3271 0.603569 CAGCCACCAGACTAAGTCGT 59.396 55.000 0.00 0.00 37.67 4.34
2109 3272 0.737715 GCAGCCACCAGACTAAGTCG 60.738 60.000 0.00 0.00 37.67 4.18
2112 3275 0.392193 CAGGCAGCCACCAGACTAAG 60.392 60.000 15.80 0.00 0.00 2.18
2115 3278 2.851102 ACAGGCAGCCACCAGACT 60.851 61.111 15.80 0.00 0.00 3.24
2120 3283 0.749454 CCTTATCACAGGCAGCCACC 60.749 60.000 15.80 0.00 0.00 4.61
2127 3290 0.392461 TTGCGGACCTTATCACAGGC 60.392 55.000 0.00 0.00 37.47 4.85
2135 3298 3.872511 TTAGACGATTTGCGGACCTTA 57.127 42.857 0.00 0.00 46.49 2.69
2142 3305 6.858478 TGATCTCTAGATTTAGACGATTTGCG 59.142 38.462 0.00 0.00 39.55 4.85
2158 3321 8.092521 ACACAAACTTCATTGTTGATCTCTAG 57.907 34.615 0.00 0.00 41.44 2.43
2167 3330 6.630071 ACTAGCAAACACAAACTTCATTGTT 58.370 32.000 0.00 0.00 41.44 2.83
2168 3331 6.095440 AGACTAGCAAACACAAACTTCATTGT 59.905 34.615 0.00 0.00 44.08 2.71
2169 3332 6.498304 AGACTAGCAAACACAAACTTCATTG 58.502 36.000 0.00 0.00 36.37 2.82
2170 3333 6.238759 GGAGACTAGCAAACACAAACTTCATT 60.239 38.462 0.00 0.00 0.00 2.57
2179 3342 3.494398 GGAAGTGGAGACTAGCAAACACA 60.494 47.826 9.82 0.00 0.00 3.72
2180 3343 3.067833 GGAAGTGGAGACTAGCAAACAC 58.932 50.000 0.00 0.00 0.00 3.32
2200 3363 4.823989 AGAACAATCCTTTCACACTTCAGG 59.176 41.667 0.00 0.00 0.00 3.86
2225 3388 2.290641 AGATGAACAAAACTCGTGCACC 59.709 45.455 12.15 0.00 0.00 5.01
2231 3394 7.220683 ACATTTCACAAAGATGAACAAAACTCG 59.779 33.333 0.00 0.00 38.31 4.18
2242 3405 8.819974 GCCCAATATTAACATTTCACAAAGATG 58.180 33.333 0.00 0.00 0.00 2.90
2251 3414 5.833131 TCAGGGAGCCCAATATTAACATTTC 59.167 40.000 8.53 0.00 38.92 2.17
2257 3420 4.871871 TGTTCAGGGAGCCCAATATTAA 57.128 40.909 8.53 0.00 38.92 1.40
2265 3428 0.247460 GCAAAATGTTCAGGGAGCCC 59.753 55.000 0.00 0.00 0.00 5.19
2266 3429 0.247460 GGCAAAATGTTCAGGGAGCC 59.753 55.000 0.00 0.00 0.00 4.70
2267 3430 1.260544 AGGCAAAATGTTCAGGGAGC 58.739 50.000 0.00 0.00 0.00 4.70
2269 3432 1.344114 GCAAGGCAAAATGTTCAGGGA 59.656 47.619 0.00 0.00 0.00 4.20
2271 3434 2.825861 AGCAAGGCAAAATGTTCAGG 57.174 45.000 0.00 0.00 0.00 3.86
2286 3449 0.111446 TCCGTGGAATGGGAAAGCAA 59.889 50.000 0.00 0.00 45.49 3.91
2287 3450 0.322456 CTCCGTGGAATGGGAAAGCA 60.322 55.000 0.00 0.00 45.49 3.91
2288 3451 1.032114 CCTCCGTGGAATGGGAAAGC 61.032 60.000 0.00 0.00 45.49 3.51
2289 3452 0.618458 TCCTCCGTGGAATGGGAAAG 59.382 55.000 0.00 0.00 45.49 2.62
2299 3462 2.036733 TGTCTTTTAGTGTCCTCCGTGG 59.963 50.000 0.00 0.00 37.10 4.94
2310 3473 7.571428 GCTTTCGCAATCTAACTGTCTTTTAGT 60.571 37.037 0.00 0.00 35.78 2.24
2318 3481 3.664107 TCAGCTTTCGCAATCTAACTGT 58.336 40.909 0.00 0.00 39.10 3.55
2319 3482 4.871993 ATCAGCTTTCGCAATCTAACTG 57.128 40.909 0.00 0.00 39.10 3.16
2325 3488 8.786937 TCAAAATTATATCAGCTTTCGCAATC 57.213 30.769 0.00 0.00 39.10 2.67
2328 3491 8.978564 TTTTCAAAATTATATCAGCTTTCGCA 57.021 26.923 0.00 0.00 39.10 5.10
2345 3508 8.962679 ACTGGAACTGTAGTTGTATTTTCAAAA 58.037 29.630 1.35 0.00 39.19 2.44
2348 3511 7.925993 CAACTGGAACTGTAGTTGTATTTTCA 58.074 34.615 11.86 0.00 45.33 2.69
2357 3520 3.454812 ACTGACCAACTGGAACTGTAGTT 59.545 43.478 1.86 0.00 40.38 2.24
2376 3539 4.273480 ACCTGAATTTCGTGTCAGAAACTG 59.727 41.667 2.28 0.00 43.32 3.16
2377 3540 4.451900 ACCTGAATTTCGTGTCAGAAACT 58.548 39.130 2.28 0.00 43.32 2.66
2380 3543 4.447290 TGAACCTGAATTTCGTGTCAGAA 58.553 39.130 2.28 0.00 43.32 3.02
2382 3545 4.692625 AGATGAACCTGAATTTCGTGTCAG 59.307 41.667 0.00 0.00 40.84 3.51
2384 3547 5.613358 AAGATGAACCTGAATTTCGTGTC 57.387 39.130 0.00 0.00 0.00 3.67
2385 3548 6.183360 ACAAAAGATGAACCTGAATTTCGTGT 60.183 34.615 0.00 0.00 0.00 4.49
2386 3549 6.208644 ACAAAAGATGAACCTGAATTTCGTG 58.791 36.000 0.00 0.00 0.00 4.35
2387 3550 6.263168 AGACAAAAGATGAACCTGAATTTCGT 59.737 34.615 0.00 0.00 0.00 3.85
2388 3551 6.672147 AGACAAAAGATGAACCTGAATTTCG 58.328 36.000 0.00 0.00 0.00 3.46
2389 3552 9.617975 CTAAGACAAAAGATGAACCTGAATTTC 57.382 33.333 0.00 0.00 0.00 2.17
2391 3554 8.924511 TCTAAGACAAAAGATGAACCTGAATT 57.075 30.769 0.00 0.00 0.00 2.17
2392 3555 8.924511 TTCTAAGACAAAAGATGAACCTGAAT 57.075 30.769 0.00 0.00 0.00 2.57
2393 3556 7.041098 GCTTCTAAGACAAAAGATGAACCTGAA 60.041 37.037 0.00 0.00 0.00 3.02
2394 3557 6.428159 GCTTCTAAGACAAAAGATGAACCTGA 59.572 38.462 0.00 0.00 0.00 3.86
2395 3558 6.205464 TGCTTCTAAGACAAAAGATGAACCTG 59.795 38.462 0.00 0.00 0.00 4.00
2396 3559 6.205658 GTGCTTCTAAGACAAAAGATGAACCT 59.794 38.462 0.00 0.00 0.00 3.50
2397 3560 6.374578 GTGCTTCTAAGACAAAAGATGAACC 58.625 40.000 0.00 0.00 0.00 3.62
2399 3562 6.299141 AGGTGCTTCTAAGACAAAAGATGAA 58.701 36.000 0.00 0.00 0.00 2.57
2400 3563 5.869579 AGGTGCTTCTAAGACAAAAGATGA 58.130 37.500 0.00 0.00 0.00 2.92
2401 3564 5.702670 TGAGGTGCTTCTAAGACAAAAGATG 59.297 40.000 0.00 0.00 0.00 2.90
2402 3565 5.869579 TGAGGTGCTTCTAAGACAAAAGAT 58.130 37.500 0.00 0.00 0.00 2.40
2403 3566 5.290493 TGAGGTGCTTCTAAGACAAAAGA 57.710 39.130 0.00 0.00 0.00 2.52
2404 3567 5.471456 ACATGAGGTGCTTCTAAGACAAAAG 59.529 40.000 0.00 0.00 0.00 2.27
2405 3568 5.239306 CACATGAGGTGCTTCTAAGACAAAA 59.761 40.000 0.00 0.00 41.36 2.44
2406 3569 4.756642 CACATGAGGTGCTTCTAAGACAAA 59.243 41.667 0.00 0.00 41.36 2.83
2420 3948 4.523083 ACAACTACACAAACACATGAGGT 58.477 39.130 0.00 0.00 0.00 3.85
2421 3949 5.525745 TGTACAACTACACAAACACATGAGG 59.474 40.000 0.00 0.00 0.00 3.86
2424 3952 7.639039 AGAATGTACAACTACACAAACACATG 58.361 34.615 0.00 0.00 35.63 3.21
2425 3953 7.801716 AGAATGTACAACTACACAAACACAT 57.198 32.000 0.00 0.00 35.63 3.21
2426 3954 7.982919 ACTAGAATGTACAACTACACAAACACA 59.017 33.333 0.00 0.00 35.63 3.72
2427 3955 8.273557 CACTAGAATGTACAACTACACAAACAC 58.726 37.037 0.00 0.00 35.63 3.32
2428 3956 7.982919 ACACTAGAATGTACAACTACACAAACA 59.017 33.333 0.00 0.00 35.63 2.83
2429 3957 8.361592 ACACTAGAATGTACAACTACACAAAC 57.638 34.615 0.00 0.00 35.63 2.93
2430 3958 8.822855 CAACACTAGAATGTACAACTACACAAA 58.177 33.333 0.00 0.00 35.63 2.83
2431 3959 7.982919 ACAACACTAGAATGTACAACTACACAA 59.017 33.333 0.00 0.00 35.63 3.33
2432 3960 7.494211 ACAACACTAGAATGTACAACTACACA 58.506 34.615 0.00 0.00 35.63 3.72
2433 3961 7.650504 TGACAACACTAGAATGTACAACTACAC 59.349 37.037 0.00 0.00 35.63 2.90
2434 3962 7.718525 TGACAACACTAGAATGTACAACTACA 58.281 34.615 0.00 0.00 37.28 2.74
2435 3963 7.148787 GCTGACAACACTAGAATGTACAACTAC 60.149 40.741 0.00 0.00 30.75 2.73
2436 3964 6.866770 GCTGACAACACTAGAATGTACAACTA 59.133 38.462 0.00 6.33 30.75 2.24
2437 3965 5.696724 GCTGACAACACTAGAATGTACAACT 59.303 40.000 0.00 5.41 30.75 3.16
2438 3966 5.696724 AGCTGACAACACTAGAATGTACAAC 59.303 40.000 0.00 0.00 30.75 3.32
2440 3968 5.221441 ACAGCTGACAACACTAGAATGTACA 60.221 40.000 23.35 0.00 30.75 2.90
2441 3969 5.230942 ACAGCTGACAACACTAGAATGTAC 58.769 41.667 23.35 0.00 30.75 2.90
2442 3970 5.468540 ACAGCTGACAACACTAGAATGTA 57.531 39.130 23.35 0.00 30.75 2.29
2445 3973 6.525629 AGTAAACAGCTGACAACACTAGAAT 58.474 36.000 23.35 0.00 0.00 2.40
2447 3975 5.531122 AGTAAACAGCTGACAACACTAGA 57.469 39.130 23.35 0.00 0.00 2.43
2448 3976 7.148573 CCATAAGTAAACAGCTGACAACACTAG 60.149 40.741 23.35 3.63 0.00 2.57
2449 3977 6.649141 CCATAAGTAAACAGCTGACAACACTA 59.351 38.462 23.35 10.17 0.00 2.74
2450 3978 5.470098 CCATAAGTAAACAGCTGACAACACT 59.530 40.000 23.35 12.41 0.00 3.55
2451 3979 5.689819 CCATAAGTAAACAGCTGACAACAC 58.310 41.667 23.35 10.32 0.00 3.32
2453 3981 4.455877 AGCCATAAGTAAACAGCTGACAAC 59.544 41.667 23.35 14.24 0.00 3.32
2454 3982 4.651778 AGCCATAAGTAAACAGCTGACAA 58.348 39.130 23.35 1.14 0.00 3.18
2455 3983 4.286297 AGCCATAAGTAAACAGCTGACA 57.714 40.909 23.35 1.13 0.00 3.58
2456 3984 5.294552 CCTAAGCCATAAGTAAACAGCTGAC 59.705 44.000 23.35 8.49 0.00 3.51
2458 3986 4.576463 CCCTAAGCCATAAGTAAACAGCTG 59.424 45.833 13.48 13.48 0.00 4.24
2459 3987 4.227527 ACCCTAAGCCATAAGTAAACAGCT 59.772 41.667 0.00 0.00 0.00 4.24
2460 3988 4.335594 CACCCTAAGCCATAAGTAAACAGC 59.664 45.833 0.00 0.00 0.00 4.40
2461 3989 5.497474 ACACCCTAAGCCATAAGTAAACAG 58.503 41.667 0.00 0.00 0.00 3.16
2463 3991 6.829229 AAACACCCTAAGCCATAAGTAAAC 57.171 37.500 0.00 0.00 0.00 2.01
2465 3993 5.712917 CCAAAACACCCTAAGCCATAAGTAA 59.287 40.000 0.00 0.00 0.00 2.24
2466 3994 5.014333 TCCAAAACACCCTAAGCCATAAGTA 59.986 40.000 0.00 0.00 0.00 2.24
2468 3996 4.340617 TCCAAAACACCCTAAGCCATAAG 58.659 43.478 0.00 0.00 0.00 1.73
2469 3997 4.340617 CTCCAAAACACCCTAAGCCATAA 58.659 43.478 0.00 0.00 0.00 1.90
2470 3998 3.308832 CCTCCAAAACACCCTAAGCCATA 60.309 47.826 0.00 0.00 0.00 2.74
2473 4001 1.545841 CCTCCAAAACACCCTAAGCC 58.454 55.000 0.00 0.00 0.00 4.35
2474 4002 0.888619 GCCTCCAAAACACCCTAAGC 59.111 55.000 0.00 0.00 0.00 3.09
2475 4003 1.545841 GGCCTCCAAAACACCCTAAG 58.454 55.000 0.00 0.00 0.00 2.18
2476 4004 0.250989 CGGCCTCCAAAACACCCTAA 60.251 55.000 0.00 0.00 0.00 2.69
2477 4005 1.128809 TCGGCCTCCAAAACACCCTA 61.129 55.000 0.00 0.00 0.00 3.53
2479 4007 1.971695 CTCGGCCTCCAAAACACCC 60.972 63.158 0.00 0.00 0.00 4.61
2480 4008 2.626780 GCTCGGCCTCCAAAACACC 61.627 63.158 0.00 0.00 0.00 4.16
2481 4009 1.578206 GAGCTCGGCCTCCAAAACAC 61.578 60.000 0.00 0.00 0.00 3.32
2482 4010 1.302511 GAGCTCGGCCTCCAAAACA 60.303 57.895 0.00 0.00 0.00 2.83
2483 4011 3.579685 GAGCTCGGCCTCCAAAAC 58.420 61.111 0.00 0.00 0.00 2.43
2490 4018 3.080121 CTCAAGGGAGCTCGGCCT 61.080 66.667 7.83 6.68 33.67 5.19
2491 4019 3.378399 GACTCAAGGGAGCTCGGCC 62.378 68.421 7.83 4.08 45.42 6.13
2492 4020 2.185608 GACTCAAGGGAGCTCGGC 59.814 66.667 7.83 0.00 45.42 5.54
2494 4022 0.891373 TTCAGACTCAAGGGAGCTCG 59.109 55.000 7.83 0.00 45.42 5.03
2498 4026 5.157940 TCAGAATTTCAGACTCAAGGGAG 57.842 43.478 0.00 0.00 46.96 4.30
2499 4027 5.567037 TTCAGAATTTCAGACTCAAGGGA 57.433 39.130 0.00 0.00 0.00 4.20
2500 4028 6.639632 TTTTCAGAATTTCAGACTCAAGGG 57.360 37.500 0.00 0.00 0.00 3.95
2530 4058 8.951243 GGCTCAATTTCTAGAAACTGATAAGTT 58.049 33.333 24.96 9.57 36.21 2.66
2531 4059 8.103305 TGGCTCAATTTCTAGAAACTGATAAGT 58.897 33.333 24.96 4.14 36.21 2.24
2534 4062 7.851228 TCTGGCTCAATTTCTAGAAACTGATA 58.149 34.615 24.96 15.33 36.21 2.15
2535 4063 6.715280 TCTGGCTCAATTTCTAGAAACTGAT 58.285 36.000 24.96 6.53 36.21 2.90
2536 4064 6.014242 TCTCTGGCTCAATTTCTAGAAACTGA 60.014 38.462 23.70 23.70 34.65 3.41
2537 4065 6.169094 TCTCTGGCTCAATTTCTAGAAACTG 58.831 40.000 19.94 19.09 32.51 3.16
2538 4066 6.365970 TCTCTGGCTCAATTTCTAGAAACT 57.634 37.500 19.94 6.71 32.51 2.66
2539 4067 7.041098 TGTTTCTCTGGCTCAATTTCTAGAAAC 60.041 37.037 19.94 14.52 45.88 2.78
2540 4068 6.998074 TGTTTCTCTGGCTCAATTTCTAGAAA 59.002 34.615 19.83 19.83 34.46 2.52
2541 4069 6.533730 TGTTTCTCTGGCTCAATTTCTAGAA 58.466 36.000 0.00 0.00 0.00 2.10
2542 4070 6.114187 TGTTTCTCTGGCTCAATTTCTAGA 57.886 37.500 0.00 0.00 0.00 2.43
2543 4071 6.038050 GGATGTTTCTCTGGCTCAATTTCTAG 59.962 42.308 0.00 0.00 0.00 2.43
2544 4072 5.882557 GGATGTTTCTCTGGCTCAATTTCTA 59.117 40.000 0.00 0.00 0.00 2.10
2546 4074 4.704057 AGGATGTTTCTCTGGCTCAATTTC 59.296 41.667 0.00 0.00 0.00 2.17
2547 4075 4.670765 AGGATGTTTCTCTGGCTCAATTT 58.329 39.130 0.00 0.00 0.00 1.82
2550 4078 2.639347 TGAGGATGTTTCTCTGGCTCAA 59.361 45.455 0.00 0.00 32.78 3.02
2551 4079 2.259917 TGAGGATGTTTCTCTGGCTCA 58.740 47.619 0.00 0.00 32.78 4.26
2552 4080 3.557228 ATGAGGATGTTTCTCTGGCTC 57.443 47.619 0.00 0.00 32.78 4.70
2553 4081 3.618351 CAATGAGGATGTTTCTCTGGCT 58.382 45.455 0.00 0.00 32.78 4.75
2555 4083 3.693085 CACCAATGAGGATGTTTCTCTGG 59.307 47.826 0.00 0.00 41.22 3.86
2557 4085 3.588842 TCCACCAATGAGGATGTTTCTCT 59.411 43.478 0.00 0.00 41.22 3.10
2558 4086 3.944015 CTCCACCAATGAGGATGTTTCTC 59.056 47.826 0.00 0.00 41.22 2.87
2559 4087 3.588842 TCTCCACCAATGAGGATGTTTCT 59.411 43.478 0.00 0.00 41.22 2.52
2560 4088 3.955471 TCTCCACCAATGAGGATGTTTC 58.045 45.455 0.00 0.00 41.22 2.78
2562 4090 3.308688 CCTTCTCCACCAATGAGGATGTT 60.309 47.826 0.00 0.00 41.22 2.71
2563 4091 2.240667 CCTTCTCCACCAATGAGGATGT 59.759 50.000 0.00 0.00 41.22 3.06
2564 4092 2.507058 TCCTTCTCCACCAATGAGGATG 59.493 50.000 0.00 0.00 41.22 3.51
2566 4094 2.191400 CTCCTTCTCCACCAATGAGGA 58.809 52.381 0.00 0.00 41.22 3.71
2567 4095 2.191400 TCTCCTTCTCCACCAATGAGG 58.809 52.381 0.00 0.00 45.67 3.86
2568 4096 3.008375 TGTTCTCCTTCTCCACCAATGAG 59.992 47.826 0.00 0.00 0.00 2.90
2570 4098 3.423539 TGTTCTCCTTCTCCACCAATG 57.576 47.619 0.00 0.00 0.00 2.82
2572 4100 3.943671 TTTGTTCTCCTTCTCCACCAA 57.056 42.857 0.00 0.00 0.00 3.67
2573 4101 5.500234 CATATTTGTTCTCCTTCTCCACCA 58.500 41.667 0.00 0.00 0.00 4.17
2574 4102 4.884164 CCATATTTGTTCTCCTTCTCCACC 59.116 45.833 0.00 0.00 0.00 4.61
2575 4103 5.501156 ACCATATTTGTTCTCCTTCTCCAC 58.499 41.667 0.00 0.00 0.00 4.02
2577 4105 8.652290 AGTATACCATATTTGTTCTCCTTCTCC 58.348 37.037 0.00 0.00 0.00 3.71
2582 4110 9.845214 AGGATAGTATACCATATTTGTTCTCCT 57.155 33.333 0.00 0.00 0.00 3.69
2583 4111 9.877178 CAGGATAGTATACCATATTTGTTCTCC 57.123 37.037 0.00 0.00 0.00 3.71
2584 4112 9.372369 GCAGGATAGTATACCATATTTGTTCTC 57.628 37.037 0.00 0.00 0.00 2.87
2585 4113 8.880244 TGCAGGATAGTATACCATATTTGTTCT 58.120 33.333 0.00 0.00 0.00 3.01
2586 4114 9.502091 TTGCAGGATAGTATACCATATTTGTTC 57.498 33.333 0.00 0.00 0.00 3.18
2587 4115 9.860650 TTTGCAGGATAGTATACCATATTTGTT 57.139 29.630 0.00 0.00 0.00 2.83
2588 4116 9.860650 TTTTGCAGGATAGTATACCATATTTGT 57.139 29.630 0.00 0.00 0.00 2.83
2598 4126 5.371176 TGGGGTGATTTTGCAGGATAGTATA 59.629 40.000 0.00 0.00 0.00 1.47
2600 4128 3.525609 TGGGGTGATTTTGCAGGATAGTA 59.474 43.478 0.00 0.00 0.00 1.82
2603 4131 2.311542 AGTGGGGTGATTTTGCAGGATA 59.688 45.455 0.00 0.00 0.00 2.59
2604 4132 1.077663 AGTGGGGTGATTTTGCAGGAT 59.922 47.619 0.00 0.00 0.00 3.24
2608 4136 2.042297 TGGATAGTGGGGTGATTTTGCA 59.958 45.455 0.00 0.00 0.00 4.08
2614 4142 0.846693 GCCTTGGATAGTGGGGTGAT 59.153 55.000 0.00 0.00 0.00 3.06
2615 4143 0.548926 TGCCTTGGATAGTGGGGTGA 60.549 55.000 0.00 0.00 0.00 4.02
2616 4144 0.552848 ATGCCTTGGATAGTGGGGTG 59.447 55.000 0.00 0.00 0.00 4.61
2617 4145 0.846693 GATGCCTTGGATAGTGGGGT 59.153 55.000 0.00 0.00 0.00 4.95
2618 4146 1.143813 AGATGCCTTGGATAGTGGGG 58.856 55.000 0.00 0.00 0.00 4.96
2620 4148 4.162040 AGAAAGATGCCTTGGATAGTGG 57.838 45.455 0.00 0.00 31.91 4.00
2621 4149 6.166984 TCTAGAAAGATGCCTTGGATAGTG 57.833 41.667 0.00 0.00 31.91 2.74
2623 4151 5.221601 TGCTCTAGAAAGATGCCTTGGATAG 60.222 44.000 0.00 0.00 31.91 2.08
2624 4152 4.655649 TGCTCTAGAAAGATGCCTTGGATA 59.344 41.667 0.00 0.00 31.91 2.59
2625 4153 3.457380 TGCTCTAGAAAGATGCCTTGGAT 59.543 43.478 0.00 0.00 31.91 3.41
2626 4154 2.840038 TGCTCTAGAAAGATGCCTTGGA 59.160 45.455 0.00 0.00 31.91 3.53
2627 4155 3.118482 TCTGCTCTAGAAAGATGCCTTGG 60.118 47.826 0.00 0.00 31.91 3.61
2653 4181 2.206576 ATTCCTGGCTCTGGTGAAAC 57.793 50.000 0.00 0.00 0.00 2.78
2656 4184 1.951209 TGTATTCCTGGCTCTGGTGA 58.049 50.000 0.00 0.00 0.00 4.02
2657 4185 2.092753 ACATGTATTCCTGGCTCTGGTG 60.093 50.000 0.00 0.00 0.00 4.17
2659 4187 2.569059 CACATGTATTCCTGGCTCTGG 58.431 52.381 0.00 0.00 0.00 3.86
2661 4189 1.133976 GCCACATGTATTCCTGGCTCT 60.134 52.381 13.91 0.00 44.99 4.09
2662 4190 1.312815 GCCACATGTATTCCTGGCTC 58.687 55.000 13.91 0.00 44.99 4.70
2664 4192 0.463654 TCGCCACATGTATTCCTGGC 60.464 55.000 11.71 11.71 44.97 4.85
2666 4194 2.146342 GGATCGCCACATGTATTCCTG 58.854 52.381 0.00 0.00 0.00 3.86
2667 4195 1.072331 GGGATCGCCACATGTATTCCT 59.928 52.381 0.00 0.00 35.15 3.36
2668 4196 1.523758 GGGATCGCCACATGTATTCC 58.476 55.000 0.00 0.69 35.15 3.01
2669 4197 1.523758 GGGGATCGCCACATGTATTC 58.476 55.000 23.21 0.00 37.60 1.75
2670 4198 0.110486 GGGGGATCGCCACATGTATT 59.890 55.000 28.21 0.00 40.36 1.89
2671 4199 0.768221 AGGGGGATCGCCACATGTAT 60.768 55.000 28.21 4.07 40.36 2.29
2672 4200 1.383943 AGGGGGATCGCCACATGTA 60.384 57.895 28.21 0.00 40.36 2.29
2673 4201 2.692368 AGGGGGATCGCCACATGT 60.692 61.111 28.21 6.15 40.36 3.21
2674 4202 2.203252 CAGGGGGATCGCCACATG 60.203 66.667 28.21 19.24 43.78 3.21
2675 4203 1.383943 TACAGGGGGATCGCCACAT 60.384 57.895 28.21 15.43 40.36 3.21
2676 4204 2.039787 TACAGGGGGATCGCCACA 59.960 61.111 28.21 8.70 40.36 4.17
2679 4207 1.122019 ACATCTACAGGGGGATCGCC 61.122 60.000 20.31 20.31 36.67 5.54
2680 4208 0.318762 GACATCTACAGGGGGATCGC 59.681 60.000 0.06 0.06 0.00 4.58
2681 4209 0.969894 GGACATCTACAGGGGGATCG 59.030 60.000 0.00 0.00 0.00 3.69
2682 4210 1.974236 CTGGACATCTACAGGGGGATC 59.026 57.143 0.00 0.00 0.00 3.36
2684 4212 3.635099 CTGGACATCTACAGGGGGA 57.365 57.895 0.00 0.00 0.00 4.81
2689 4217 3.511540 TGTGTTCTCCTGGACATCTACAG 59.488 47.826 0.00 0.00 34.54 2.74
2690 4218 3.506398 TGTGTTCTCCTGGACATCTACA 58.494 45.455 0.00 0.00 0.00 2.74
2691 4219 4.744795 ATGTGTTCTCCTGGACATCTAC 57.255 45.455 0.00 0.00 0.00 2.59
2693 4221 4.647564 AAATGTGTTCTCCTGGACATCT 57.352 40.909 0.00 0.00 0.00 2.90
2695 4223 4.524328 GGAAAAATGTGTTCTCCTGGACAT 59.476 41.667 0.00 0.00 0.00 3.06
2696 4224 3.888930 GGAAAAATGTGTTCTCCTGGACA 59.111 43.478 0.00 0.00 0.00 4.02
2697 4225 3.888930 TGGAAAAATGTGTTCTCCTGGAC 59.111 43.478 0.00 0.00 0.00 4.02
2698 4226 3.888930 GTGGAAAAATGTGTTCTCCTGGA 59.111 43.478 0.00 0.00 0.00 3.86
2699 4227 3.005791 GGTGGAAAAATGTGTTCTCCTGG 59.994 47.826 0.00 0.00 0.00 4.45
2700 4228 3.636300 TGGTGGAAAAATGTGTTCTCCTG 59.364 43.478 0.00 0.00 0.00 3.86
2701 4229 3.909732 TGGTGGAAAAATGTGTTCTCCT 58.090 40.909 0.00 0.00 0.00 3.69
2702 4230 4.664150 TTGGTGGAAAAATGTGTTCTCC 57.336 40.909 0.00 0.00 0.00 3.71
2705 4233 5.423886 TCCTTTTGGTGGAAAAATGTGTTC 58.576 37.500 0.00 0.00 41.38 3.18
2707 4235 4.469586 ACTCCTTTTGGTGGAAAAATGTGT 59.530 37.500 0.00 0.00 41.38 3.72
2708 4236 5.022282 ACTCCTTTTGGTGGAAAAATGTG 57.978 39.130 0.00 0.00 41.38 3.21
2709 4237 5.427378 CAACTCCTTTTGGTGGAAAAATGT 58.573 37.500 0.00 0.00 41.38 2.71
2711 4239 4.080638 TGCAACTCCTTTTGGTGGAAAAAT 60.081 37.500 0.00 0.00 41.38 1.82
2714 4242 2.430332 CTGCAACTCCTTTTGGTGGAAA 59.570 45.455 0.00 0.00 41.38 3.13
2715 4243 2.031120 CTGCAACTCCTTTTGGTGGAA 58.969 47.619 0.00 0.00 41.38 3.53
2716 4244 1.691196 CTGCAACTCCTTTTGGTGGA 58.309 50.000 0.00 0.00 41.38 4.02
2717 4245 0.675633 CCTGCAACTCCTTTTGGTGG 59.324 55.000 0.00 0.00 41.38 4.61
2718 4246 0.675633 CCCTGCAACTCCTTTTGGTG 59.324 55.000 0.00 0.00 41.38 4.17
2720 4248 1.547372 CATCCCTGCAACTCCTTTTGG 59.453 52.381 0.00 0.00 42.21 3.28
2741 4269 1.105167 ATCAGACCCCGCATGCATTG 61.105 55.000 19.57 7.15 0.00 2.82
2742 4270 0.820891 GATCAGACCCCGCATGCATT 60.821 55.000 19.57 0.00 0.00 3.56
2743 4271 1.228063 GATCAGACCCCGCATGCAT 60.228 57.895 19.57 0.00 0.00 3.96
2744 4272 1.986632 ATGATCAGACCCCGCATGCA 61.987 55.000 19.57 0.00 0.00 3.96
2745 4273 0.035317 TATGATCAGACCCCGCATGC 59.965 55.000 7.91 7.91 0.00 4.06
2746 4274 2.549064 TTATGATCAGACCCCGCATG 57.451 50.000 0.09 0.00 0.00 4.06
2747 4275 5.441718 AATATTATGATCAGACCCCGCAT 57.558 39.130 0.09 0.00 0.00 4.73
2748 4276 4.908601 AATATTATGATCAGACCCCGCA 57.091 40.909 0.09 0.00 0.00 5.69
2749 4277 7.361799 GGTTTAAATATTATGATCAGACCCCGC 60.362 40.741 0.09 0.00 0.00 6.13
2750 4278 7.663905 TGGTTTAAATATTATGATCAGACCCCG 59.336 37.037 0.09 0.00 0.00 5.73
2751 4279 8.793592 GTGGTTTAAATATTATGATCAGACCCC 58.206 37.037 0.09 0.00 0.00 4.95
2752 4280 9.349713 TGTGGTTTAAATATTATGATCAGACCC 57.650 33.333 0.09 0.00 0.00 4.46
2764 4622 7.546250 TGGGTCATGTTGTGGTTTAAATATT 57.454 32.000 0.00 0.00 0.00 1.28
2782 4640 1.067295 AAGGCTGATGTCTTGGGTCA 58.933 50.000 0.00 0.00 36.67 4.02
2783 4641 3.209410 CATAAGGCTGATGTCTTGGGTC 58.791 50.000 3.44 0.00 38.73 4.46
2785 4643 2.947652 CACATAAGGCTGATGTCTTGGG 59.052 50.000 14.86 0.00 38.73 4.12
2786 4644 3.376234 CACACATAAGGCTGATGTCTTGG 59.624 47.826 14.86 6.51 38.73 3.61
2787 4645 4.256110 TCACACATAAGGCTGATGTCTTG 58.744 43.478 14.86 14.20 38.73 3.02
2788 4646 4.558226 TCACACATAAGGCTGATGTCTT 57.442 40.909 14.86 2.24 41.52 3.01
2789 4647 4.558226 TTCACACATAAGGCTGATGTCT 57.442 40.909 14.86 0.11 35.31 3.41
2825 4688 6.488006 AGTGCAAAATTAAGCTCTTCTTCTGA 59.512 34.615 0.00 0.00 36.25 3.27
2826 4689 6.675987 AGTGCAAAATTAAGCTCTTCTTCTG 58.324 36.000 0.00 0.00 36.25 3.02
2835 4698 7.790823 AAACATCAAAGTGCAAAATTAAGCT 57.209 28.000 0.00 0.00 0.00 3.74
2840 4703 9.949174 GGATTTAAAACATCAAAGTGCAAAATT 57.051 25.926 0.00 0.00 0.00 1.82
2857 4720 3.721969 GGGGGCTGGGGATTTAAAA 57.278 52.632 0.00 0.00 0.00 1.52
2872 4735 1.377333 GACCGAAGCAGAAAGGGGG 60.377 63.158 0.00 0.00 0.00 5.40
2890 4753 0.315568 GCCTGGGAGCTAGTATGTCG 59.684 60.000 0.00 0.00 0.00 4.35
2931 4794 3.454375 GAGAAAGGTTATGGATCGCGAA 58.546 45.455 15.24 0.00 0.00 4.70
2934 4797 3.194005 TGGAGAAAGGTTATGGATCGC 57.806 47.619 0.00 0.00 0.00 4.58
2940 4803 6.980397 GGCATTGTTTATGGAGAAAGGTTATG 59.020 38.462 0.00 0.00 34.66 1.90
2942 4805 6.252995 AGGCATTGTTTATGGAGAAAGGTTA 58.747 36.000 0.00 0.00 34.66 2.85
2943 4806 5.086621 AGGCATTGTTTATGGAGAAAGGTT 58.913 37.500 0.00 0.00 34.66 3.50
2955 4818 3.932822 TCGTGCTAGAAGGCATTGTTTA 58.067 40.909 0.00 0.00 44.34 2.01
2998 4861 3.694072 TGTGTGTTCTCAAAGTTTCCCAG 59.306 43.478 0.00 0.00 0.00 4.45
3005 4868 2.653726 TGCCATGTGTGTTCTCAAAGT 58.346 42.857 0.00 0.00 0.00 2.66
3012 4875 3.742369 CCTTTCATTTGCCATGTGTGTTC 59.258 43.478 0.00 0.00 0.00 3.18
3041 4904 9.709495 GTCTCTCATCAGCTTAATAAGATCATT 57.291 33.333 3.88 0.00 0.00 2.57
3042 4905 8.313292 GGTCTCTCATCAGCTTAATAAGATCAT 58.687 37.037 3.88 0.00 0.00 2.45
3043 4906 7.288621 TGGTCTCTCATCAGCTTAATAAGATCA 59.711 37.037 3.88 0.00 0.00 2.92
3044 4907 7.665690 TGGTCTCTCATCAGCTTAATAAGATC 58.334 38.462 3.88 0.00 0.00 2.75
3045 4908 7.609097 TGGTCTCTCATCAGCTTAATAAGAT 57.391 36.000 3.88 0.00 0.00 2.40
3046 4909 7.423844 TTGGTCTCTCATCAGCTTAATAAGA 57.576 36.000 3.88 0.00 0.00 2.10
3047 4910 8.149647 AGATTGGTCTCTCATCAGCTTAATAAG 58.850 37.037 0.00 0.00 0.00 1.73
3048 4911 8.027524 AGATTGGTCTCTCATCAGCTTAATAA 57.972 34.615 0.00 0.00 0.00 1.40
3049 4912 7.609097 AGATTGGTCTCTCATCAGCTTAATA 57.391 36.000 0.00 0.00 0.00 0.98
3050 4913 6.497624 AGATTGGTCTCTCATCAGCTTAAT 57.502 37.500 0.00 0.00 0.00 1.40
3051 4914 5.911752 GAGATTGGTCTCTCATCAGCTTAA 58.088 41.667 0.00 0.00 46.03 1.85
3052 4915 5.528043 GAGATTGGTCTCTCATCAGCTTA 57.472 43.478 0.00 0.00 46.03 3.09
3053 4916 4.405116 GAGATTGGTCTCTCATCAGCTT 57.595 45.455 0.00 0.00 46.03 3.74
3064 4927 1.208052 CATCGGGTGTGAGATTGGTCT 59.792 52.381 0.00 0.00 37.42 3.85
3065 4928 1.656652 CATCGGGTGTGAGATTGGTC 58.343 55.000 0.00 0.00 0.00 4.02
3066 4929 0.392998 GCATCGGGTGTGAGATTGGT 60.393 55.000 0.00 0.00 0.00 3.67
3067 4930 0.107508 AGCATCGGGTGTGAGATTGG 60.108 55.000 0.00 0.00 0.00 3.16
3068 4931 1.293924 GAGCATCGGGTGTGAGATTG 58.706 55.000 0.00 0.00 0.00 2.67
3069 4932 0.179000 GGAGCATCGGGTGTGAGATT 59.821 55.000 0.00 0.00 34.37 2.40
3070 4933 0.977627 TGGAGCATCGGGTGTGAGAT 60.978 55.000 0.00 0.00 34.37 2.75
3071 4934 0.977627 ATGGAGCATCGGGTGTGAGA 60.978 55.000 0.00 0.00 34.37 3.27
3072 4935 0.107508 AATGGAGCATCGGGTGTGAG 60.108 55.000 0.00 0.00 34.37 3.51
3073 4936 0.392863 CAATGGAGCATCGGGTGTGA 60.393 55.000 0.00 0.00 34.37 3.58
3074 4937 1.378882 CCAATGGAGCATCGGGTGTG 61.379 60.000 0.00 0.00 34.37 3.82
3075 4938 1.077501 CCAATGGAGCATCGGGTGT 60.078 57.895 0.00 0.00 34.37 4.16
3076 4939 0.394216 TTCCAATGGAGCATCGGGTG 60.394 55.000 0.86 0.00 34.37 4.61
3077 4940 0.107017 CTTCCAATGGAGCATCGGGT 60.107 55.000 0.86 0.00 34.37 5.28
3078 4941 0.820891 CCTTCCAATGGAGCATCGGG 60.821 60.000 0.86 0.00 34.37 5.14
3079 4942 1.450531 GCCTTCCAATGGAGCATCGG 61.451 60.000 8.44 4.45 34.37 4.18
3080 4943 0.749091 TGCCTTCCAATGGAGCATCG 60.749 55.000 11.57 0.00 29.79 3.84
3081 4944 1.340248 CATGCCTTCCAATGGAGCATC 59.660 52.381 21.56 6.11 40.19 3.91
3082 4945 1.063492 TCATGCCTTCCAATGGAGCAT 60.063 47.619 19.47 19.47 41.98 3.79
3083 4946 0.332293 TCATGCCTTCCAATGGAGCA 59.668 50.000 16.88 16.88 37.31 4.26
3084 4947 1.477553 TTCATGCCTTCCAATGGAGC 58.522 50.000 0.86 4.17 31.21 4.70
3085 4948 3.702548 TGAATTCATGCCTTCCAATGGAG 59.297 43.478 3.38 0.00 31.21 3.86
3086 4949 3.710724 TGAATTCATGCCTTCCAATGGA 58.289 40.909 3.38 0.00 0.00 3.41
3087 4950 4.475051 TTGAATTCATGCCTTCCAATGG 57.525 40.909 9.40 0.00 0.00 3.16
3088 4951 6.995511 AATTTGAATTCATGCCTTCCAATG 57.004 33.333 9.40 0.00 0.00 2.82
3089 4952 9.333724 GATAAATTTGAATTCATGCCTTCCAAT 57.666 29.630 9.40 0.47 0.00 3.16
3090 4953 8.319881 TGATAAATTTGAATTCATGCCTTCCAA 58.680 29.630 9.40 0.00 0.00 3.53
3091 4954 7.849160 TGATAAATTTGAATTCATGCCTTCCA 58.151 30.769 9.40 1.15 0.00 3.53
3092 4955 8.721019 TTGATAAATTTGAATTCATGCCTTCC 57.279 30.769 9.40 0.00 0.00 3.46
3095 4958 9.893634 TGATTTGATAAATTTGAATTCATGCCT 57.106 25.926 9.40 0.00 0.00 4.75
3108 4971 9.643693 GTGTTGTTCCAGATGATTTGATAAATT 57.356 29.630 0.00 0.00 0.00 1.82
3109 4972 9.028284 AGTGTTGTTCCAGATGATTTGATAAAT 57.972 29.630 0.00 0.00 0.00 1.40
3110 4973 8.408043 AGTGTTGTTCCAGATGATTTGATAAA 57.592 30.769 0.00 0.00 0.00 1.40
3111 4974 8.408043 AAGTGTTGTTCCAGATGATTTGATAA 57.592 30.769 0.00 0.00 0.00 1.75
3112 4975 7.121168 GGAAGTGTTGTTCCAGATGATTTGATA 59.879 37.037 0.00 0.00 44.89 2.15
3113 4976 6.071728 GGAAGTGTTGTTCCAGATGATTTGAT 60.072 38.462 0.00 0.00 44.89 2.57
3114 4977 5.241506 GGAAGTGTTGTTCCAGATGATTTGA 59.758 40.000 0.00 0.00 44.89 2.69
3115 4978 5.464168 GGAAGTGTTGTTCCAGATGATTTG 58.536 41.667 0.00 0.00 44.89 2.32
3116 4979 5.712152 GGAAGTGTTGTTCCAGATGATTT 57.288 39.130 0.00 0.00 44.89 2.17
3125 4988 4.753107 TCGTTCATTAGGAAGTGTTGTTCC 59.247 41.667 0.00 0.00 45.76 3.62
3126 4989 5.917541 TCGTTCATTAGGAAGTGTTGTTC 57.082 39.130 0.00 0.00 35.82 3.18
3127 4990 6.485313 TCATTCGTTCATTAGGAAGTGTTGTT 59.515 34.615 0.00 0.00 35.82 2.83
3128 4991 5.995282 TCATTCGTTCATTAGGAAGTGTTGT 59.005 36.000 0.00 0.00 35.82 3.32
3129 4992 6.480524 TCATTCGTTCATTAGGAAGTGTTG 57.519 37.500 0.00 0.00 35.82 3.33
3130 4993 6.878923 TGATCATTCGTTCATTAGGAAGTGTT 59.121 34.615 0.00 0.00 35.82 3.32
3131 4994 6.406370 TGATCATTCGTTCATTAGGAAGTGT 58.594 36.000 0.00 0.00 35.82 3.55
3132 4995 6.908870 TGATCATTCGTTCATTAGGAAGTG 57.091 37.500 0.00 0.00 35.82 3.16
3133 4996 7.921786 TTTGATCATTCGTTCATTAGGAAGT 57.078 32.000 0.00 0.00 35.82 3.01
3134 4997 9.443283 GATTTTGATCATTCGTTCATTAGGAAG 57.557 33.333 0.00 0.00 35.82 3.46
3135 4998 8.955388 TGATTTTGATCATTCGTTCATTAGGAA 58.045 29.630 0.00 0.00 35.32 3.36
3136 4999 8.397906 GTGATTTTGATCATTCGTTCATTAGGA 58.602 33.333 0.00 0.00 32.61 2.94
3137 5000 7.645340 GGTGATTTTGATCATTCGTTCATTAGG 59.355 37.037 0.00 0.00 32.61 2.69
3138 5001 7.645340 GGGTGATTTTGATCATTCGTTCATTAG 59.355 37.037 0.00 0.00 32.61 1.73
3139 5002 7.339212 AGGGTGATTTTGATCATTCGTTCATTA 59.661 33.333 0.00 0.00 32.61 1.90
3140 5003 6.153340 AGGGTGATTTTGATCATTCGTTCATT 59.847 34.615 0.00 0.00 32.61 2.57
3141 5004 5.653769 AGGGTGATTTTGATCATTCGTTCAT 59.346 36.000 0.00 0.00 32.61 2.57
3142 5005 5.009631 AGGGTGATTTTGATCATTCGTTCA 58.990 37.500 0.00 0.00 32.61 3.18
3143 5006 5.567138 AGGGTGATTTTGATCATTCGTTC 57.433 39.130 0.00 0.00 32.61 3.95
3144 5007 5.711976 AGAAGGGTGATTTTGATCATTCGTT 59.288 36.000 0.00 0.00 32.61 3.85
3145 5008 5.256474 AGAAGGGTGATTTTGATCATTCGT 58.744 37.500 0.00 0.00 32.61 3.85
3146 5009 5.824904 AGAAGGGTGATTTTGATCATTCG 57.175 39.130 0.00 0.00 32.61 3.34
3147 5010 8.286191 ACTAAGAAGGGTGATTTTGATCATTC 57.714 34.615 0.00 0.00 32.61 2.67
3148 5011 8.655935 AACTAAGAAGGGTGATTTTGATCATT 57.344 30.769 0.00 0.00 32.61 2.57
3149 5012 8.655935 AAACTAAGAAGGGTGATTTTGATCAT 57.344 30.769 0.00 0.00 32.61 2.45
3150 5013 9.753674 ATAAACTAAGAAGGGTGATTTTGATCA 57.246 29.630 0.00 0.00 0.00 2.92
3153 5016 8.303876 GCAATAAACTAAGAAGGGTGATTTTGA 58.696 33.333 0.00 0.00 0.00 2.69
3154 5017 8.087750 TGCAATAAACTAAGAAGGGTGATTTTG 58.912 33.333 0.00 0.00 0.00 2.44
3155 5018 8.189119 TGCAATAAACTAAGAAGGGTGATTTT 57.811 30.769 0.00 0.00 0.00 1.82
3156 5019 7.775053 TGCAATAAACTAAGAAGGGTGATTT 57.225 32.000 0.00 0.00 0.00 2.17
3157 5020 7.775053 TTGCAATAAACTAAGAAGGGTGATT 57.225 32.000 0.00 0.00 0.00 2.57
3158 5021 7.232534 TGTTTGCAATAAACTAAGAAGGGTGAT 59.767 33.333 0.00 0.00 0.00 3.06
3159 5022 6.547880 TGTTTGCAATAAACTAAGAAGGGTGA 59.452 34.615 0.00 0.00 0.00 4.02
3160 5023 6.744112 TGTTTGCAATAAACTAAGAAGGGTG 58.256 36.000 0.00 0.00 0.00 4.61
3161 5024 6.969993 TGTTTGCAATAAACTAAGAAGGGT 57.030 33.333 0.00 0.00 0.00 4.34
3162 5025 7.708752 TGTTTGTTTGCAATAAACTAAGAAGGG 59.291 33.333 26.51 0.00 41.37 3.95
3163 5026 8.641499 TGTTTGTTTGCAATAAACTAAGAAGG 57.359 30.769 26.51 0.00 41.37 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.