Multiple sequence alignment - TraesCS5A01G358100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G358100 chr5A 100.000 7384 0 0 1 7384 559813105 559820488 0.000000e+00 13636.0
1 TraesCS5A01G358100 chr5A 96.774 93 2 1 3754 3846 24796258 24796349 3.570000e-33 154.0
2 TraesCS5A01G358100 chr5A 96.703 91 3 0 3754 3844 528581363 528581273 1.280000e-32 152.0
3 TraesCS5A01G358100 chr5D 93.446 2655 127 17 4338 6962 443643943 443646580 0.000000e+00 3895.0
4 TraesCS5A01G358100 chr5D 93.257 964 33 12 698 1645 443640075 443641022 0.000000e+00 1391.0
5 TraesCS5A01G358100 chr5D 90.380 790 59 12 2052 2828 443641659 443642444 0.000000e+00 1022.0
6 TraesCS5A01G358100 chr5D 85.120 457 49 16 2852 3302 443642389 443642832 4.060000e-122 449.0
7 TraesCS5A01G358100 chr5D 91.026 312 19 3 1757 2059 443641289 443641600 5.330000e-111 412.0
8 TraesCS5A01G358100 chr5D 86.563 387 15 18 3361 3742 443643187 443643541 6.950000e-105 392.0
9 TraesCS5A01G358100 chr5D 89.753 283 23 3 7107 7384 443648397 443648678 2.530000e-94 357.0
10 TraesCS5A01G358100 chr5D 84.022 363 37 6 3835 4186 443643551 443643903 5.520000e-86 329.0
11 TraesCS5A01G358100 chr5B 93.031 2468 129 19 4186 6631 540260861 540263307 0.000000e+00 3565.0
12 TraesCS5A01G358100 chr5B 92.606 2218 146 15 4273 6479 540748689 540746479 0.000000e+00 3171.0
13 TraesCS5A01G358100 chr5B 94.993 759 38 0 5305 6063 417340337 417341095 0.000000e+00 1192.0
14 TraesCS5A01G358100 chr5B 95.215 606 17 4 698 1298 540257347 540257945 0.000000e+00 948.0
15 TraesCS5A01G358100 chr5B 92.025 652 50 2 29 678 558705227 558705878 0.000000e+00 915.0
16 TraesCS5A01G358100 chr5B 92.117 647 50 1 38 683 690708716 690708070 0.000000e+00 911.0
17 TraesCS5A01G358100 chr5B 91.590 654 52 3 28 678 445179614 445178961 0.000000e+00 900.0
18 TraesCS5A01G358100 chr5B 84.605 773 71 27 1298 2065 540257916 540258645 0.000000e+00 725.0
19 TraesCS5A01G358100 chr5B 89.817 491 22 9 3262 3742 540259985 540260457 8.190000e-169 604.0
20 TraesCS5A01G358100 chr5B 89.969 319 28 3 3868 4184 540260512 540260828 6.900000e-110 409.0
21 TraesCS5A01G358100 chr5B 83.846 390 44 10 6661 7035 540746269 540745884 3.280000e-93 353.0
22 TraesCS5A01G358100 chr5B 83.871 372 43 11 2474 2831 540259032 540259400 9.180000e-89 339.0
23 TraesCS5A01G358100 chr6B 95.784 759 32 0 5305 6063 668976294 668977052 0.000000e+00 1225.0
24 TraesCS5A01G358100 chr7B 95.491 754 34 0 5310 6063 137023256 137024009 0.000000e+00 1205.0
25 TraesCS5A01G358100 chr7B 92.202 654 49 2 27 678 217303293 217303946 0.000000e+00 924.0
26 TraesCS5A01G358100 chr4B 92.061 655 49 3 28 679 16082500 16081846 0.000000e+00 918.0
27 TraesCS5A01G358100 chr4B 91.938 645 49 3 28 669 424285225 424285869 0.000000e+00 900.0
28 TraesCS5A01G358100 chr4B 91.437 654 52 4 28 678 617392721 617393373 0.000000e+00 894.0
29 TraesCS5A01G358100 chr3B 91.641 658 45 8 28 678 49870012 49869358 0.000000e+00 902.0
30 TraesCS5A01G358100 chr1B 91.411 652 54 2 29 678 330837808 330838459 0.000000e+00 893.0
31 TraesCS5A01G358100 chr1B 97.647 85 2 0 3754 3838 651523614 651523698 5.970000e-31 147.0
32 TraesCS5A01G358100 chr1B 93.878 98 4 1 3754 3849 687254026 687253929 5.970000e-31 147.0
33 TraesCS5A01G358100 chr2A 98.864 88 1 0 3754 3841 529797214 529797301 2.760000e-34 158.0
34 TraesCS5A01G358100 chr2A 73.993 273 50 17 4660 4926 9683673 9683930 2.840000e-14 91.6
35 TraesCS5A01G358100 chr2A 73.993 273 50 17 4660 4926 10411253 10410996 2.840000e-14 91.6
36 TraesCS5A01G358100 chr1A 98.837 86 1 0 3754 3839 535427554 535427469 3.570000e-33 154.0
37 TraesCS5A01G358100 chrUn 93.204 103 5 2 3754 3855 352766900 352767001 4.620000e-32 150.0
38 TraesCS5A01G358100 chrUn 76.415 212 40 9 4540 4751 2092568 2092367 1.010000e-18 106.0
39 TraesCS5A01G358100 chr7A 93.204 103 5 2 3754 3855 735739826 735739927 4.620000e-32 150.0
40 TraesCS5A01G358100 chr3A 97.647 85 2 0 3754 3838 235837201 235837117 5.970000e-31 147.0
41 TraesCS5A01G358100 chr2B 75.362 276 56 10 4660 4926 25477204 25476932 1.010000e-23 122.0
42 TraesCS5A01G358100 chr2B 80.435 138 27 0 4660 4797 137216413 137216276 1.010000e-18 106.0
43 TraesCS5A01G358100 chr2B 75.000 168 41 1 7109 7276 647294141 647294307 7.940000e-10 76.8
44 TraesCS5A01G358100 chr2D 88.043 92 11 0 4660 4751 14021747 14021656 7.830000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G358100 chr5A 559813105 559820488 7383 False 13636.000000 13636 100.000000 1 7384 1 chr5A.!!$F2 7383
1 TraesCS5A01G358100 chr5D 443640075 443648678 8603 False 1030.875000 3895 89.195875 698 7384 8 chr5D.!!$F1 6686
2 TraesCS5A01G358100 chr5B 540745884 540748689 2805 True 1762.000000 3171 88.226000 4273 7035 2 chr5B.!!$R3 2762
3 TraesCS5A01G358100 chr5B 417340337 417341095 758 False 1192.000000 1192 94.993000 5305 6063 1 chr5B.!!$F1 758
4 TraesCS5A01G358100 chr5B 540257347 540263307 5960 False 1098.333333 3565 89.418000 698 6631 6 chr5B.!!$F3 5933
5 TraesCS5A01G358100 chr5B 558705227 558705878 651 False 915.000000 915 92.025000 29 678 1 chr5B.!!$F2 649
6 TraesCS5A01G358100 chr5B 690708070 690708716 646 True 911.000000 911 92.117000 38 683 1 chr5B.!!$R2 645
7 TraesCS5A01G358100 chr5B 445178961 445179614 653 True 900.000000 900 91.590000 28 678 1 chr5B.!!$R1 650
8 TraesCS5A01G358100 chr6B 668976294 668977052 758 False 1225.000000 1225 95.784000 5305 6063 1 chr6B.!!$F1 758
9 TraesCS5A01G358100 chr7B 137023256 137024009 753 False 1205.000000 1205 95.491000 5310 6063 1 chr7B.!!$F1 753
10 TraesCS5A01G358100 chr7B 217303293 217303946 653 False 924.000000 924 92.202000 27 678 1 chr7B.!!$F2 651
11 TraesCS5A01G358100 chr4B 16081846 16082500 654 True 918.000000 918 92.061000 28 679 1 chr4B.!!$R1 651
12 TraesCS5A01G358100 chr4B 424285225 424285869 644 False 900.000000 900 91.938000 28 669 1 chr4B.!!$F1 641
13 TraesCS5A01G358100 chr4B 617392721 617393373 652 False 894.000000 894 91.437000 28 678 1 chr4B.!!$F2 650
14 TraesCS5A01G358100 chr3B 49869358 49870012 654 True 902.000000 902 91.641000 28 678 1 chr3B.!!$R1 650
15 TraesCS5A01G358100 chr1B 330837808 330838459 651 False 893.000000 893 91.411000 29 678 1 chr1B.!!$F1 649

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
690 693 0.179094 CGGCTAGGTCCGCAATTGTA 60.179 55.0 7.40 0.0 43.18 2.41 F
1639 1665 0.038892 GCTCCTTGTTGCACCATGTG 60.039 55.0 0.00 0.0 36.51 3.21 F
2270 2525 0.329596 GGGACTGGTGAGGCATTCTT 59.670 55.0 0.00 0.0 0.00 2.52 F
3359 3999 0.105039 AAGCTGTATACCTGCTCGCC 59.895 55.0 17.17 0.0 46.44 5.54 F
3577 4481 0.034059 CAACCAGCGTCTCCTCAACT 59.966 55.0 0.00 0.0 0.00 3.16 F
5090 6069 0.749454 GCCCGGTGATGCAGAAATCT 60.749 55.0 0.00 0.0 0.00 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2235 2490 0.034186 TCCCAGCAAAATGCCTCGAT 60.034 50.0 0.00 0.00 46.52 3.59 R
3340 3980 0.105039 GGCGAGCAGGTATACAGCTT 59.895 55.0 19.20 7.16 39.02 3.74 R
3577 4481 0.108585 GAATGGAGGGGCGCTGATAA 59.891 55.0 9.52 0.00 0.00 1.75 R
5141 6120 0.037303 CCATAGCGGCCAGATGGAAT 59.963 55.0 18.64 0.00 42.41 3.01 R
5285 6264 1.254975 TGCTGTAGGCGTCCTTGCTA 61.255 55.0 3.71 0.00 45.43 3.49 R
7048 8723 0.107017 ACCCGATGCTCCATTGGAAG 60.107 55.0 6.88 2.61 45.73 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.211174 TGGCAATGATGAACAATTGAACA 57.789 34.783 13.59 11.65 0.00 3.18
25 26 5.231702 TGGCAATGATGAACAATTGAACAG 58.768 37.500 13.59 1.33 0.00 3.16
26 27 4.092383 GGCAATGATGAACAATTGAACAGC 59.908 41.667 13.59 13.98 0.00 4.40
27 28 4.927425 GCAATGATGAACAATTGAACAGCT 59.073 37.500 13.59 0.00 0.00 4.24
85 86 5.645929 TCAAACATGGCAGTACAACGAATAT 59.354 36.000 0.00 0.00 0.00 1.28
86 87 6.819146 TCAAACATGGCAGTACAACGAATATA 59.181 34.615 0.00 0.00 0.00 0.86
138 139 0.321919 ACCACCTAGCGACGACTACA 60.322 55.000 0.00 0.00 0.00 2.74
263 264 2.345991 GTAGGACCAGCGCACCAA 59.654 61.111 11.47 0.00 0.00 3.67
291 292 0.861837 CCGCCGCAGATGAAGAATAC 59.138 55.000 0.00 0.00 0.00 1.89
300 301 4.854291 GCAGATGAAGAATACCGTAGATCG 59.146 45.833 0.00 0.00 39.52 3.69
371 372 2.493278 CCGAGCAAATCCACCAAAGATT 59.507 45.455 0.00 0.00 35.46 2.40
380 381 1.462616 CACCAAAGATTGATCCGCCA 58.537 50.000 0.00 0.00 0.00 5.69
495 496 1.946475 GCCGGCTCGTCTTCCTAAGT 61.946 60.000 22.15 0.00 0.00 2.24
519 520 5.442391 AGGACACAAACCTTAGCAAAACTA 58.558 37.500 0.00 0.00 33.55 2.24
522 523 6.474427 GGACACAAACCTTAGCAAAACTAAAC 59.526 38.462 0.00 0.00 40.36 2.01
652 653 4.023450 GGAGACGGAAACCCTAACTTTTTG 60.023 45.833 0.00 0.00 0.00 2.44
665 668 2.136026 ACTTTTTGTGGAGGAGGAGGT 58.864 47.619 0.00 0.00 0.00 3.85
688 691 3.409856 CGGCTAGGTCCGCAATTG 58.590 61.111 0.00 0.00 43.18 2.32
689 692 1.449601 CGGCTAGGTCCGCAATTGT 60.450 57.895 7.40 0.00 43.18 2.71
690 693 0.179094 CGGCTAGGTCCGCAATTGTA 60.179 55.000 7.40 0.00 43.18 2.41
691 694 1.296727 GGCTAGGTCCGCAATTGTAC 58.703 55.000 7.40 3.47 0.00 2.90
692 695 0.928229 GCTAGGTCCGCAATTGTACG 59.072 55.000 7.40 2.85 0.00 3.67
693 696 1.738030 GCTAGGTCCGCAATTGTACGT 60.738 52.381 7.40 7.55 0.00 3.57
694 697 1.924524 CTAGGTCCGCAATTGTACGTG 59.075 52.381 7.40 0.00 0.00 4.49
695 698 0.672401 AGGTCCGCAATTGTACGTGG 60.672 55.000 7.40 0.00 0.00 4.94
696 699 1.133869 GTCCGCAATTGTACGTGGC 59.866 57.895 7.40 0.00 32.62 5.01
1042 1056 8.378565 AGTCCATCCATTATAAGGTATGAACAG 58.621 37.037 4.46 0.00 0.00 3.16
1045 1059 7.607991 CCATCCATTATAAGGTATGAACAGGTC 59.392 40.741 4.46 0.00 0.00 3.85
1058 1072 0.679505 ACAGGTCACACGTGCATACT 59.320 50.000 17.22 6.53 37.49 2.12
1059 1073 1.336887 ACAGGTCACACGTGCATACTC 60.337 52.381 17.22 5.81 37.49 2.59
1060 1074 1.067565 CAGGTCACACGTGCATACTCT 60.068 52.381 17.22 7.85 0.00 3.24
1061 1075 1.618837 AGGTCACACGTGCATACTCTT 59.381 47.619 17.22 0.00 0.00 2.85
1369 1388 6.769822 TCCAATCAGCCTTTCATCTAGAATTC 59.230 38.462 0.00 0.00 35.83 2.17
1568 1593 0.528924 AACCATGTTCGGTCGATCGA 59.471 50.000 18.48 18.48 38.76 3.59
1582 1607 1.640428 GATCGACCTCAACATTCGCA 58.360 50.000 0.00 0.00 32.70 5.10
1627 1652 2.086869 ACATTGATCCGTTGCTCCTTG 58.913 47.619 0.00 0.00 0.00 3.61
1639 1665 0.038892 GCTCCTTGTTGCACCATGTG 60.039 55.000 0.00 0.00 36.51 3.21
1659 1686 2.743928 CCCTTGCGTGTGAGAGCC 60.744 66.667 0.00 0.00 0.00 4.70
1660 1687 2.031012 CCTTGCGTGTGAGAGCCA 59.969 61.111 0.00 0.00 0.00 4.75
1661 1688 1.376424 CCTTGCGTGTGAGAGCCAT 60.376 57.895 0.00 0.00 0.00 4.40
1662 1689 1.642037 CCTTGCGTGTGAGAGCCATG 61.642 60.000 0.00 0.00 0.00 3.66
1665 1692 2.821366 CGTGTGAGAGCCATGCCC 60.821 66.667 0.00 0.00 0.00 5.36
1667 1694 3.731728 TGTGAGAGCCATGCCCCC 61.732 66.667 0.00 0.00 0.00 5.40
1686 1713 3.501911 CCCCCACCCCTATGCAGG 61.502 72.222 0.00 0.00 42.22 4.85
1687 1714 4.209866 CCCCACCCCTATGCAGGC 62.210 72.222 0.00 0.00 41.08 4.85
1688 1715 4.209866 CCCACCCCTATGCAGGCC 62.210 72.222 0.00 0.00 41.08 5.19
1689 1716 4.209866 CCACCCCTATGCAGGCCC 62.210 72.222 0.00 0.00 41.08 5.80
1690 1717 4.209866 CACCCCTATGCAGGCCCC 62.210 72.222 0.00 0.00 41.08 5.80
1711 1738 2.351350 CGCCTACCAACAATGTTGAACC 60.351 50.000 25.93 9.25 0.00 3.62
1714 1741 4.795962 GCCTACCAACAATGTTGAACCTTG 60.796 45.833 25.93 11.30 31.35 3.61
1722 1749 3.576078 ATGTTGAACCTTGTCCACTCA 57.424 42.857 0.00 0.00 0.00 3.41
1743 1770 1.809619 CGCGAGCGATTCTTCCCAA 60.810 57.895 12.58 0.00 42.83 4.12
1744 1771 1.716172 GCGAGCGATTCTTCCCAAC 59.284 57.895 0.00 0.00 0.00 3.77
1745 1772 1.019278 GCGAGCGATTCTTCCCAACA 61.019 55.000 0.00 0.00 0.00 3.33
1746 1773 0.721718 CGAGCGATTCTTCCCAACAC 59.278 55.000 0.00 0.00 0.00 3.32
1747 1774 1.087501 GAGCGATTCTTCCCAACACC 58.912 55.000 0.00 0.00 0.00 4.16
1748 1775 0.400213 AGCGATTCTTCCCAACACCA 59.600 50.000 0.00 0.00 0.00 4.17
1752 1779 3.306019 GCGATTCTTCCCAACACCATTTT 60.306 43.478 0.00 0.00 0.00 1.82
1753 1780 4.236935 CGATTCTTCCCAACACCATTTTG 58.763 43.478 0.00 0.00 0.00 2.44
1755 1782 5.610398 GATTCTTCCCAACACCATTTTGTT 58.390 37.500 0.00 0.00 40.46 2.83
1805 1985 4.007323 ACAGGGCTAGGACGGGGT 62.007 66.667 0.00 0.00 0.00 4.95
1857 2038 0.621571 TGCCCTATGACCAAGCTCCT 60.622 55.000 0.00 0.00 0.00 3.69
1864 2053 3.249189 ACCAAGCTCCTGGCCGAA 61.249 61.111 4.24 0.00 40.45 4.30
1885 2074 2.359850 GCACCATGCTGGAACCGA 60.360 61.111 8.91 0.00 40.96 4.69
1898 2087 0.734889 GAACCGACAAGGCATCATGG 59.265 55.000 0.00 0.00 46.52 3.66
1938 2127 1.141881 CTGGAGACGAATGACCCCG 59.858 63.158 0.00 0.00 0.00 5.73
1939 2128 2.298158 CTGGAGACGAATGACCCCGG 62.298 65.000 0.00 0.00 0.00 5.73
1945 2134 1.004320 CGAATGACCCCGGTGTTGA 60.004 57.895 0.00 0.00 0.00 3.18
1960 2149 3.524648 TTGAAGACGCGGTGACCCC 62.525 63.158 12.47 0.00 0.00 4.95
2038 2227 0.934496 CGACGACAAAGCTGGAACAA 59.066 50.000 0.00 0.00 38.70 2.83
2065 2320 1.197721 GACAAAGCTGGAACCATCACG 59.802 52.381 0.00 0.00 0.00 4.35
2098 2353 2.890371 GGTGCTATGACCGGTCGT 59.110 61.111 31.01 31.01 0.00 4.34
2125 2380 1.300620 CCGGAACTCGCAGTTGACA 60.301 57.895 0.00 0.00 38.80 3.58
2128 2383 0.861837 GGAACTCGCAGTTGACAGTG 59.138 55.000 6.31 0.00 38.80 3.66
2145 2400 0.393537 GTGCTGGAACTAGGCTGCAT 60.394 55.000 0.50 0.00 32.98 3.96
2187 2442 1.609501 TGCTCGGGGTTGCTAGACT 60.610 57.895 0.00 0.00 0.00 3.24
2200 2455 1.403814 CTAGACTGATGGCGAGGGAA 58.596 55.000 0.00 0.00 0.00 3.97
2210 2465 3.358111 TGGCGAGGGAAATTAATGTGA 57.642 42.857 0.00 0.00 0.00 3.58
2213 2468 3.013921 GCGAGGGAAATTAATGTGACCA 58.986 45.455 0.00 0.00 0.00 4.02
2221 2476 6.339730 GGAAATTAATGTGACCAATGATGCA 58.660 36.000 0.00 0.00 0.00 3.96
2234 2489 3.928005 ATGATGCATTCTCCTGTGACT 57.072 42.857 0.00 0.00 0.00 3.41
2235 2490 5.121105 CAATGATGCATTCTCCTGTGACTA 58.879 41.667 0.00 0.00 31.05 2.59
2270 2525 0.329596 GGGACTGGTGAGGCATTCTT 59.670 55.000 0.00 0.00 0.00 2.52
2376 2631 3.181367 CGGCGAGAAGCTGCAAAT 58.819 55.556 0.00 0.00 46.36 2.32
2381 2636 1.588824 CGAGAAGCTGCAAATGGGCA 61.589 55.000 1.02 0.00 42.53 5.36
2525 2780 9.643652 GTTCATGATTTTGAAAAATTTTGCGTA 57.356 25.926 3.73 0.00 38.64 4.42
2739 3097 4.990526 ACTCCATCAGTTCCAGAAATGTT 58.009 39.130 7.62 0.00 37.61 2.71
2740 3098 4.763793 ACTCCATCAGTTCCAGAAATGTTG 59.236 41.667 7.62 9.19 37.61 3.33
2827 3185 9.549078 ACATATTTTAAAAATGTTCACGGGTTT 57.451 25.926 16.39 0.00 29.68 3.27
2829 3187 9.765795 ATATTTTAAAAATGTTCACGGGTTTCA 57.234 25.926 4.44 0.00 0.00 2.69
2830 3188 7.900782 TTTTAAAAATGTTCACGGGTTTCAA 57.099 28.000 0.00 0.00 0.00 2.69
2831 3189 8.494016 TTTTAAAAATGTTCACGGGTTTCAAT 57.506 26.923 0.00 0.00 0.00 2.57
2832 3190 8.494016 TTTAAAAATGTTCACGGGTTTCAATT 57.506 26.923 0.00 0.00 0.00 2.32
2833 3191 6.993786 AAAAATGTTCACGGGTTTCAATTT 57.006 29.167 0.00 0.00 0.00 1.82
2834 3192 6.993786 AAAATGTTCACGGGTTTCAATTTT 57.006 29.167 0.00 0.00 0.00 1.82
2835 3193 6.993786 AAATGTTCACGGGTTTCAATTTTT 57.006 29.167 0.00 0.00 0.00 1.94
2928 3286 9.179552 AGTTTCAAAACAAAGTTTGCAATTTTC 57.820 25.926 15.59 4.09 41.30 2.29
3034 3393 8.194104 TCCAATTTTTCTGAAAGATGTTCGAAA 58.806 29.630 0.00 0.00 46.36 3.46
3167 3526 1.828979 AAAATACGGTTCGGGCACAT 58.171 45.000 0.00 0.00 0.00 3.21
3173 3532 1.669760 GGTTCGGGCACATGTCGAA 60.670 57.895 14.69 14.69 40.03 3.71
3205 3564 1.670730 CAAAATGGGCCGGCCAAAC 60.671 57.895 44.46 28.85 37.98 2.93
3210 3569 4.660938 GGGCCGGCCAAACAGAGT 62.661 66.667 44.46 0.00 37.98 3.24
3234 3593 4.849329 CGCTCGAGTGGGTACGGC 62.849 72.222 18.36 0.00 0.00 5.68
3248 3607 2.025727 CGGCCTAGGTCGCTAACG 59.974 66.667 24.91 6.40 36.12 3.18
3308 3945 2.752030 AGGAGAAGCCAGCTGTATACA 58.248 47.619 13.81 5.25 40.02 2.29
3358 3998 1.861575 GAAAGCTGTATACCTGCTCGC 59.138 52.381 17.17 10.65 46.44 5.03
3359 3999 0.105039 AAGCTGTATACCTGCTCGCC 59.895 55.000 17.17 0.00 46.44 5.54
3383 4284 3.420606 CACTGTCTGCTGCTGCCG 61.421 66.667 13.47 6.90 38.71 5.69
3388 4289 4.687215 TCTGCTGCTGCCGTGACC 62.687 66.667 13.47 0.00 38.71 4.02
3431 4332 6.207691 TCTTTCAAGAAAAACCAAGTCCTG 57.792 37.500 0.00 0.00 30.73 3.86
3573 4477 2.266055 CCCAACCAGCGTCTCCTC 59.734 66.667 0.00 0.00 0.00 3.71
3577 4481 0.034059 CAACCAGCGTCTCCTCAACT 59.966 55.000 0.00 0.00 0.00 3.16
3619 4523 6.279882 TCTTCTCTTCCTACGCTACTACTAC 58.720 44.000 0.00 0.00 0.00 2.73
3620 4524 5.867903 TCTCTTCCTACGCTACTACTACT 57.132 43.478 0.00 0.00 0.00 2.57
3621 4525 6.968263 TCTCTTCCTACGCTACTACTACTA 57.032 41.667 0.00 0.00 0.00 1.82
3632 4536 4.687483 GCTACTACTACTAGCTCTCTTCCG 59.313 50.000 0.00 0.00 34.82 4.30
3639 4543 1.546476 CTAGCTCTCTTCCGTTGTGGT 59.454 52.381 0.00 0.00 39.52 4.16
3692 4602 9.661563 GATCTATCTTCTGCTACTAGCTTACTA 57.338 37.037 9.49 0.00 42.97 1.82
3693 4603 8.836268 TCTATCTTCTGCTACTAGCTTACTAC 57.164 38.462 9.49 0.00 42.97 2.73
3694 4604 5.987777 TCTTCTGCTACTAGCTTACTACG 57.012 43.478 9.49 0.00 42.97 3.51
3695 4605 5.426504 TCTTCTGCTACTAGCTTACTACGT 58.573 41.667 9.49 0.00 42.97 3.57
3696 4606 6.577103 TCTTCTGCTACTAGCTTACTACGTA 58.423 40.000 9.49 0.00 42.97 3.57
3697 4607 6.478344 TCTTCTGCTACTAGCTTACTACGTAC 59.522 42.308 9.49 0.00 42.97 3.67
3698 4608 5.911752 TCTGCTACTAGCTTACTACGTACT 58.088 41.667 9.49 0.00 42.97 2.73
3699 4609 7.043961 TCTGCTACTAGCTTACTACGTACTA 57.956 40.000 9.49 0.00 42.97 1.82
3700 4610 6.920758 TCTGCTACTAGCTTACTACGTACTAC 59.079 42.308 9.49 0.00 42.97 2.73
3701 4611 6.810911 TGCTACTAGCTTACTACGTACTACT 58.189 40.000 9.49 0.00 42.97 2.57
3729 4639 4.959596 ACGAGTTTATCTACGAAGCTCA 57.040 40.909 0.00 0.00 34.76 4.26
3742 4652 5.189659 ACGAAGCTCATCTCCTAATGTAC 57.810 43.478 0.00 0.00 0.00 2.90
3743 4653 4.222886 CGAAGCTCATCTCCTAATGTACG 58.777 47.826 0.00 0.00 0.00 3.67
3745 4655 5.446143 AAGCTCATCTCCTAATGTACGAG 57.554 43.478 0.00 0.00 0.00 4.18
3746 4656 4.465886 AGCTCATCTCCTAATGTACGAGT 58.534 43.478 0.00 0.00 0.00 4.18
3747 4657 4.890581 AGCTCATCTCCTAATGTACGAGTT 59.109 41.667 0.00 0.00 0.00 3.01
3750 4660 7.231722 AGCTCATCTCCTAATGTACGAGTTTAT 59.768 37.037 0.00 0.00 0.00 1.40
3751 4661 7.539366 GCTCATCTCCTAATGTACGAGTTTATC 59.461 40.741 0.00 0.00 0.00 1.75
3752 4662 7.883217 TCATCTCCTAATGTACGAGTTTATCC 58.117 38.462 0.00 0.00 0.00 2.59
3753 4663 7.724506 TCATCTCCTAATGTACGAGTTTATCCT 59.275 37.037 0.00 0.00 0.00 3.24
3754 4664 7.273320 TCTCCTAATGTACGAGTTTATCCTG 57.727 40.000 0.00 0.00 0.00 3.86
3755 4665 6.832384 TCTCCTAATGTACGAGTTTATCCTGT 59.168 38.462 0.00 0.00 0.00 4.00
3756 4666 7.013083 TCTCCTAATGTACGAGTTTATCCTGTC 59.987 40.741 0.00 0.00 0.00 3.51
3757 4667 5.913514 CCTAATGTACGAGTTTATCCTGTCG 59.086 44.000 0.00 0.00 38.40 4.35
3758 4668 3.141002 TGTACGAGTTTATCCTGTCGC 57.859 47.619 0.00 0.00 35.83 5.19
3759 4669 2.488937 TGTACGAGTTTATCCTGTCGCA 59.511 45.455 0.00 0.00 35.83 5.10
3760 4670 2.279582 ACGAGTTTATCCTGTCGCAG 57.720 50.000 0.00 0.52 35.83 5.18
3761 4671 1.816835 ACGAGTTTATCCTGTCGCAGA 59.183 47.619 8.20 0.00 35.83 4.26
3762 4672 2.427453 ACGAGTTTATCCTGTCGCAGAT 59.573 45.455 8.20 3.76 40.67 2.90
3763 4673 3.630769 ACGAGTTTATCCTGTCGCAGATA 59.369 43.478 8.20 3.01 40.67 1.98
3764 4674 4.278669 ACGAGTTTATCCTGTCGCAGATAT 59.721 41.667 8.20 4.79 40.67 1.63
3765 4675 4.618912 CGAGTTTATCCTGTCGCAGATATG 59.381 45.833 8.20 0.00 40.67 1.78
3766 4676 4.887748 AGTTTATCCTGTCGCAGATATGG 58.112 43.478 8.20 0.00 40.67 2.74
3767 4677 4.588951 AGTTTATCCTGTCGCAGATATGGA 59.411 41.667 8.20 0.00 40.67 3.41
3768 4678 5.247110 AGTTTATCCTGTCGCAGATATGGAT 59.753 40.000 8.20 0.00 42.19 3.41
3769 4679 3.606595 ATCCTGTCGCAGATATGGATG 57.393 47.619 8.20 0.00 39.70 3.51
3770 4680 2.319844 TCCTGTCGCAGATATGGATGT 58.680 47.619 8.20 0.00 40.67 3.06
3771 4681 3.496331 TCCTGTCGCAGATATGGATGTA 58.504 45.455 8.20 0.00 40.67 2.29
3772 4682 4.089361 TCCTGTCGCAGATATGGATGTAT 58.911 43.478 8.20 0.00 40.67 2.29
3773 4683 4.158579 TCCTGTCGCAGATATGGATGTATC 59.841 45.833 8.20 0.00 40.67 2.24
3774 4684 4.159321 CCTGTCGCAGATATGGATGTATCT 59.841 45.833 8.20 0.00 41.03 1.98
3775 4685 5.358160 CCTGTCGCAGATATGGATGTATCTA 59.642 44.000 8.20 0.00 38.93 1.98
3776 4686 6.442513 TGTCGCAGATATGGATGTATCTAG 57.557 41.667 0.00 0.00 38.93 2.43
3777 4687 6.180472 TGTCGCAGATATGGATGTATCTAGA 58.820 40.000 0.00 0.00 38.93 2.43
3778 4688 6.830838 TGTCGCAGATATGGATGTATCTAGAT 59.169 38.462 10.73 10.73 38.93 1.98
3779 4689 7.138081 GTCGCAGATATGGATGTATCTAGATG 58.862 42.308 15.79 0.00 38.93 2.90
3780 4690 6.830838 TCGCAGATATGGATGTATCTAGATGT 59.169 38.462 15.79 1.25 38.93 3.06
3781 4691 7.993183 TCGCAGATATGGATGTATCTAGATGTA 59.007 37.037 15.79 4.44 38.93 2.29
3782 4692 8.791675 CGCAGATATGGATGTATCTAGATGTAT 58.208 37.037 15.79 9.11 38.93 2.29
3809 4719 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
3810 4720 6.219473 AGTTCTAGATACATCCATTTCTGCG 58.781 40.000 0.00 0.00 0.00 5.18
3811 4721 6.040955 AGTTCTAGATACATCCATTTCTGCGA 59.959 38.462 0.00 0.00 0.00 5.10
3812 4722 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
3813 4723 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
3814 4724 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
3815 4725 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
3816 4726 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
3817 4727 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
3818 4728 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
3819 4729 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
3820 4730 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
3821 4731 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
3822 4732 4.092821 TCCATTTCTGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
3823 4733 4.334443 CATTTCTGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
3824 4734 3.306917 TTCTGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
3825 4735 3.306917 TCTGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
3826 4736 2.991190 TCTGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
3827 4737 2.734606 CTGCGACGAGTAATTTGGAACA 59.265 45.455 0.00 0.00 0.00 3.18
3828 4738 2.734606 TGCGACGAGTAATTTGGAACAG 59.265 45.455 0.00 0.00 42.39 3.16
3829 4739 2.991190 GCGACGAGTAATTTGGAACAGA 59.009 45.455 0.00 0.00 42.39 3.41
3830 4740 3.060895 GCGACGAGTAATTTGGAACAGAG 59.939 47.826 0.00 0.00 42.39 3.35
3831 4741 3.612860 CGACGAGTAATTTGGAACAGAGG 59.387 47.826 0.00 0.00 42.39 3.69
3832 4742 3.933332 GACGAGTAATTTGGAACAGAGGG 59.067 47.826 0.00 0.00 42.39 4.30
3833 4743 3.581332 ACGAGTAATTTGGAACAGAGGGA 59.419 43.478 0.00 0.00 42.39 4.20
3840 4750 1.853963 TGGAACAGAGGGAGTAGCTC 58.146 55.000 0.00 0.00 0.00 4.09
3866 4776 6.586844 ACTGTCGCTGTAAATTTCTACTTCTC 59.413 38.462 0.00 0.00 0.00 2.87
3885 4807 2.427812 CTCCTAAGGAGTTCCGAGGTTC 59.572 54.545 16.88 0.00 44.25 3.62
3924 4846 6.776744 TGTTAACCTGTCTGTCTCTAGTAGA 58.223 40.000 2.48 0.00 0.00 2.59
3933 4855 9.781834 CTGTCTGTCTCTAGTAGATTTACAAAG 57.218 37.037 0.00 1.77 36.36 2.77
3966 4890 6.934048 ACCTAGAAAGAAAAGCAGCATATC 57.066 37.500 0.00 0.00 0.00 1.63
3987 4911 4.584874 TCCCGATGCTTGAAGACAAATAA 58.415 39.130 0.00 0.00 35.49 1.40
3988 4912 4.394920 TCCCGATGCTTGAAGACAAATAAC 59.605 41.667 0.00 0.00 35.49 1.89
4033 4957 7.742151 AGTTTTGATTTCTTGAACAAAAGCAC 58.258 30.769 0.00 0.00 40.92 4.40
4063 4987 6.900568 TTTTGTCACATTCATGTTGGTTTC 57.099 33.333 0.00 0.00 39.39 2.78
4078 5002 1.666888 GGTTTCTGGACATTTGCTGCG 60.667 52.381 0.00 0.00 0.00 5.18
4160 5084 1.875963 CACATTTCCAGTGGCCGAC 59.124 57.895 3.51 0.00 33.43 4.79
4170 5094 1.944024 CAGTGGCCGACAGTTTGTAAA 59.056 47.619 0.00 0.00 0.00 2.01
4179 5103 4.518217 CGACAGTTTGTAAAGAAGCAGTG 58.482 43.478 0.00 0.00 0.00 3.66
4226 5181 7.714377 TCAGTATGTACGGTAACAAAGGAAAAA 59.286 33.333 0.00 0.00 37.40 1.94
4228 5183 9.070179 AGTATGTACGGTAACAAAGGAAAAATT 57.930 29.630 0.00 0.00 32.02 1.82
4229 5184 9.333497 GTATGTACGGTAACAAAGGAAAAATTC 57.667 33.333 0.00 0.00 32.02 2.17
4231 5186 7.419204 TGTACGGTAACAAAGGAAAAATTCTG 58.581 34.615 0.00 0.00 0.00 3.02
4232 5187 6.702716 ACGGTAACAAAGGAAAAATTCTGA 57.297 33.333 0.00 0.00 0.00 3.27
4234 5189 6.544564 ACGGTAACAAAGGAAAAATTCTGAGA 59.455 34.615 0.00 0.00 0.00 3.27
4236 5191 8.082242 CGGTAACAAAGGAAAAATTCTGAGATT 58.918 33.333 0.00 0.00 0.00 2.40
4240 5196 9.750125 AACAAAGGAAAAATTCTGAGATTACAC 57.250 29.630 0.00 0.00 0.00 2.90
4297 5255 6.910536 ATCTCAATGGACGTAACTCATTTC 57.089 37.500 0.00 0.00 0.00 2.17
4365 5338 7.642071 AACTTGCATTTGATTTACATGTGTC 57.358 32.000 9.11 4.75 0.00 3.67
4439 5412 2.347731 GGAAGAACGGAACATCCAGAC 58.652 52.381 0.00 0.00 35.91 3.51
4440 5413 2.289444 GGAAGAACGGAACATCCAGACA 60.289 50.000 0.00 0.00 35.91 3.41
4466 5439 1.267574 TGATCCTCAGCTTCGCCCTT 61.268 55.000 0.00 0.00 0.00 3.95
4487 5460 2.203181 GCCATCCTCCTCTGCTGC 60.203 66.667 0.00 0.00 0.00 5.25
4505 5478 3.537874 GCAGGGATCCGGCGTAGT 61.538 66.667 6.01 0.00 34.74 2.73
4633 5606 2.363172 GGTCTCCTCCAGGTCCAGC 61.363 68.421 0.00 0.00 36.34 4.85
4644 5623 4.394712 GTCCAGCCGACCACCAGG 62.395 72.222 0.00 0.00 42.21 4.45
5090 6069 0.749454 GCCCGGTGATGCAGAAATCT 60.749 55.000 0.00 0.00 0.00 2.40
5141 6120 1.733758 CAACGGCGGCAACTACGTA 60.734 57.895 13.24 0.00 44.05 3.57
5147 6126 1.578583 GCGGCAACTACGTATTCCAT 58.421 50.000 0.00 0.00 0.00 3.41
5156 6135 1.069765 CGTATTCCATCTGGCCGCT 59.930 57.895 0.00 0.00 34.44 5.52
5231 6210 1.594833 CTGGCATGGCTTGTGCATT 59.405 52.632 21.08 0.00 44.25 3.56
5237 6216 1.135527 CATGGCTTGTGCATTCGGATT 59.864 47.619 0.00 0.00 41.91 3.01
5267 6246 4.690719 TCCATGGTCGCCGCGTTT 62.691 61.111 12.58 0.00 0.00 3.60
5399 6378 3.637273 GGGTCTTCCTGGGCGTGT 61.637 66.667 0.00 0.00 0.00 4.49
5440 6419 2.435586 GCACTGGCTCTGCGACAT 60.436 61.111 0.00 0.00 36.96 3.06
5597 6576 3.134804 AGATGATTGGACTTAAGGACCGG 59.865 47.826 7.53 0.00 0.00 5.28
5774 6753 4.719369 GCCGACGACACCGAGCTT 62.719 66.667 0.00 0.00 39.50 3.74
6036 7015 1.681166 GCACCATGAAGCTGTCCAGAT 60.681 52.381 0.00 0.00 0.00 2.90
6077 7056 4.459089 GACTGGCAGCTCCCGACC 62.459 72.222 15.89 0.00 0.00 4.79
6131 7110 1.664965 GGAAGCTGCTGACGACGTT 60.665 57.895 1.35 0.00 0.00 3.99
6134 7113 2.644555 AAGCTGCTGACGACGTTGGT 62.645 55.000 1.35 0.00 0.00 3.67
6152 7131 2.279517 GACAGGCCGGTCTATGCG 60.280 66.667 26.56 0.00 34.92 4.73
6249 7228 2.347490 GCGTGTGGGTGGAGATGT 59.653 61.111 0.00 0.00 0.00 3.06
6257 7236 1.915489 TGGGTGGAGATGTTGTGCTAT 59.085 47.619 0.00 0.00 0.00 2.97
6327 7306 2.362736 GAGCAGAGTTCATGAATGCCA 58.637 47.619 22.72 0.00 37.61 4.92
6347 7326 3.053842 CCATCTGGCTTATCATAGGGCAT 60.054 47.826 3.29 0.00 39.50 4.40
6408 7387 0.774491 TGACAGGGGGTTTAGGGCTT 60.774 55.000 0.00 0.00 0.00 4.35
6414 7393 1.063190 GGGGGTTTAGGGCTTAGCAAT 60.063 52.381 6.53 0.00 0.00 3.56
6509 7488 3.091190 ACCACCCGGTGTTCACCA 61.091 61.111 19.90 0.00 46.79 4.17
6510 7489 2.281484 CCACCCGGTGTTCACCAG 60.281 66.667 19.90 13.31 0.00 4.00
6516 7510 0.250727 CCGGTGTTCACCAGGTTGAT 60.251 55.000 19.90 0.00 0.00 2.57
6527 7521 1.069022 CCAGGTTGATGTTGAAGCACG 60.069 52.381 0.00 0.00 0.00 5.34
6535 7538 0.179150 TGTTGAAGCACGCCAAACAC 60.179 50.000 0.00 0.00 0.00 3.32
6537 7540 2.051345 GAAGCACGCCAAACACCG 60.051 61.111 0.00 0.00 0.00 4.94
6540 7543 4.683334 GCACGCCAAACACCGAGC 62.683 66.667 0.00 0.00 34.32 5.03
6541 7544 3.276091 CACGCCAAACACCGAGCA 61.276 61.111 0.00 0.00 0.00 4.26
6542 7545 3.276846 ACGCCAAACACCGAGCAC 61.277 61.111 0.00 0.00 0.00 4.40
6543 7546 3.276091 CGCCAAACACCGAGCACA 61.276 61.111 0.00 0.00 0.00 4.57
6585 7588 6.870971 ATAAAACCAATACGTGAGTTGTGT 57.129 33.333 0.00 0.00 46.40 3.72
6593 7596 3.093717 ACGTGAGTTGTGTTACTCCTG 57.906 47.619 0.00 0.00 46.40 3.86
6597 7600 5.045215 CGTGAGTTGTGTTACTCCTGTTAA 58.955 41.667 0.00 0.00 43.11 2.01
6623 7626 9.971922 ATAATTTTATTAAGAGATGCAAGTGCC 57.028 29.630 0.00 0.00 41.18 5.01
6672 7727 9.494271 TCTTATATATCCAAGTGATTCAACAGC 57.506 33.333 0.00 0.00 34.76 4.40
6703 7758 1.212935 ACTGCATGTGGTATTCCTCCC 59.787 52.381 0.00 0.00 34.23 4.30
6811 7876 9.946165 GCCCTTGTAGTTTATTATTGTGTTATC 57.054 33.333 0.00 0.00 0.00 1.75
6854 7922 8.924511 TTTAAATTCTGAACTTCTCATGGAGT 57.075 30.769 0.00 0.00 32.14 3.85
6855 7923 8.553459 TTAAATTCTGAACTTCTCATGGAGTC 57.447 34.615 0.00 0.00 32.14 3.36
6856 7924 5.752036 ATTCTGAACTTCTCATGGAGTCA 57.248 39.130 0.00 0.00 32.14 3.41
6857 7925 5.551305 TTCTGAACTTCTCATGGAGTCAA 57.449 39.130 0.00 0.00 32.14 3.18
6858 7926 4.887748 TCTGAACTTCTCATGGAGTCAAC 58.112 43.478 0.00 0.00 32.14 3.18
6889 7958 7.730084 TGGAATATTTTGTGTTGGAATGTGAA 58.270 30.769 0.00 0.00 0.00 3.18
6892 7961 8.606040 AATATTTTGTGTTGGAATGTGAAAGG 57.394 30.769 0.00 0.00 0.00 3.11
6896 7965 6.968263 TTGTGTTGGAATGTGAAAGGATTA 57.032 33.333 0.00 0.00 0.00 1.75
6905 7974 7.391554 TGGAATGTGAAAGGATTAAACTCTGAG 59.608 37.037 2.45 2.45 0.00 3.35
6946 8015 4.938832 TCGTAACAAATTGGATGAATCGGT 59.061 37.500 0.00 0.00 0.00 4.69
6985 8660 6.547880 TGTTTGCAATAAACTAAGAAGGGTGA 59.452 34.615 0.00 0.00 0.00 4.02
7007 8682 7.645340 GGTGATTTTGATCATTCGTTCATTAGG 59.355 37.037 0.00 0.00 32.61 2.69
7029 8704 5.464168 GGAAGTGTTGTTCCAGATGATTTG 58.536 41.667 0.00 0.00 44.89 2.32
7031 8706 6.071728 GGAAGTGTTGTTCCAGATGATTTGAT 60.072 38.462 0.00 0.00 44.89 2.57
7035 8710 9.028284 AGTGTTGTTCCAGATGATTTGATAAAT 57.972 29.630 0.00 0.00 0.00 1.40
7036 8711 9.643693 GTGTTGTTCCAGATGATTTGATAAATT 57.356 29.630 0.00 0.00 0.00 1.82
7049 8724 9.893634 TGATTTGATAAATTTGAATTCATGCCT 57.106 25.926 9.40 0.00 0.00 4.75
7052 8727 8.721019 TTGATAAATTTGAATTCATGCCTTCC 57.279 30.769 9.40 0.00 0.00 3.46
7053 8728 7.849160 TGATAAATTTGAATTCATGCCTTCCA 58.151 30.769 9.40 1.15 0.00 3.53
7054 8729 8.319881 TGATAAATTTGAATTCATGCCTTCCAA 58.680 29.630 9.40 0.00 0.00 3.53
7055 8730 9.333724 GATAAATTTGAATTCATGCCTTCCAAT 57.666 29.630 9.40 0.47 0.00 3.16
7056 8731 6.995511 AATTTGAATTCATGCCTTCCAATG 57.004 33.333 9.40 0.00 0.00 2.82
7057 8732 4.475051 TTGAATTCATGCCTTCCAATGG 57.525 40.909 9.40 0.00 0.00 3.16
7058 8733 3.710724 TGAATTCATGCCTTCCAATGGA 58.289 40.909 3.38 0.00 0.00 3.41
7059 8734 3.702548 TGAATTCATGCCTTCCAATGGAG 59.297 43.478 3.38 0.00 31.21 3.86
7060 8735 1.477553 TTCATGCCTTCCAATGGAGC 58.522 50.000 0.86 4.17 31.21 4.70
7061 8736 0.332293 TCATGCCTTCCAATGGAGCA 59.668 50.000 16.88 16.88 37.31 4.26
7062 8737 1.063492 TCATGCCTTCCAATGGAGCAT 60.063 47.619 19.47 19.47 41.98 3.79
7064 8739 0.749091 TGCCTTCCAATGGAGCATCG 60.749 55.000 11.57 0.00 29.79 3.84
7065 8740 1.450531 GCCTTCCAATGGAGCATCGG 61.451 60.000 8.44 4.45 34.37 4.18
7066 8741 0.820891 CCTTCCAATGGAGCATCGGG 60.821 60.000 0.86 0.00 34.37 5.14
7068 8743 0.394216 TTCCAATGGAGCATCGGGTG 60.394 55.000 0.86 0.00 34.37 4.61
7070 8745 1.378882 CCAATGGAGCATCGGGTGTG 61.379 60.000 0.00 0.00 34.37 3.82
7072 8747 0.107508 AATGGAGCATCGGGTGTGAG 60.108 55.000 0.00 0.00 34.37 3.51
7074 8749 0.977627 TGGAGCATCGGGTGTGAGAT 60.978 55.000 0.00 0.00 34.37 2.75
7075 8750 0.179000 GGAGCATCGGGTGTGAGATT 59.821 55.000 0.00 0.00 34.37 2.40
7076 8751 1.293924 GAGCATCGGGTGTGAGATTG 58.706 55.000 0.00 0.00 0.00 2.67
7077 8752 0.107508 AGCATCGGGTGTGAGATTGG 60.108 55.000 0.00 0.00 0.00 3.16
7078 8753 0.392998 GCATCGGGTGTGAGATTGGT 60.393 55.000 0.00 0.00 0.00 3.67
7079 8754 1.656652 CATCGGGTGTGAGATTGGTC 58.343 55.000 0.00 0.00 0.00 4.02
7080 8755 1.208052 CATCGGGTGTGAGATTGGTCT 59.792 52.381 0.00 0.00 37.42 3.85
7092 8767 5.528043 GAGATTGGTCTCTCATCAGCTTA 57.472 43.478 0.00 0.00 46.03 3.09
7093 8768 5.911752 GAGATTGGTCTCTCATCAGCTTAA 58.088 41.667 0.00 0.00 46.03 1.85
7095 8770 7.609097 AGATTGGTCTCTCATCAGCTTAATA 57.391 36.000 0.00 0.00 0.00 0.98
7097 8772 8.149647 AGATTGGTCTCTCATCAGCTTAATAAG 58.850 37.037 0.00 0.00 0.00 1.73
7098 8773 7.423844 TTGGTCTCTCATCAGCTTAATAAGA 57.576 36.000 3.88 0.00 0.00 2.10
7099 8774 7.609097 TGGTCTCTCATCAGCTTAATAAGAT 57.391 36.000 3.88 0.00 0.00 2.40
7100 8775 7.665690 TGGTCTCTCATCAGCTTAATAAGATC 58.334 38.462 3.88 0.00 0.00 2.75
7101 8776 7.288621 TGGTCTCTCATCAGCTTAATAAGATCA 59.711 37.037 3.88 0.00 0.00 2.92
7102 8777 8.313292 GGTCTCTCATCAGCTTAATAAGATCAT 58.687 37.037 3.88 0.00 0.00 2.45
7132 9873 3.742369 CCTTTCATTTGCCATGTGTGTTC 59.258 43.478 0.00 0.00 0.00 3.18
7139 9880 2.653726 TGCCATGTGTGTTCTCAAAGT 58.346 42.857 0.00 0.00 0.00 2.66
7146 9887 3.694072 TGTGTGTTCTCAAAGTTTCCCAG 59.306 43.478 0.00 0.00 0.00 4.45
7189 9930 3.932822 TCGTGCTAGAAGGCATTGTTTA 58.067 40.909 0.00 0.00 44.34 2.01
7201 9942 5.086621 AGGCATTGTTTATGGAGAAAGGTT 58.913 37.500 0.00 0.00 34.66 3.50
7202 9943 6.252995 AGGCATTGTTTATGGAGAAAGGTTA 58.747 36.000 0.00 0.00 34.66 2.85
7204 9945 6.980397 GGCATTGTTTATGGAGAAAGGTTATG 59.020 38.462 0.00 0.00 34.66 1.90
7210 9951 3.194005 TGGAGAAAGGTTATGGATCGC 57.806 47.619 0.00 0.00 0.00 4.58
7213 9954 3.454375 GAGAAAGGTTATGGATCGCGAA 58.546 45.455 15.24 0.00 0.00 4.70
7254 9995 0.315568 GCCTGGGAGCTAGTATGTCG 59.684 60.000 0.00 0.00 0.00 4.35
7272 10013 1.377333 GACCGAAGCAGAAAGGGGG 60.377 63.158 0.00 0.00 0.00 5.40
7287 10028 3.721969 GGGGGCTGGGGATTTAAAA 57.278 52.632 0.00 0.00 0.00 1.52
7304 10045 9.949174 GGATTTAAAACATCAAAGTGCAAAATT 57.051 25.926 0.00 0.00 0.00 1.82
7309 10050 7.790823 AAACATCAAAGTGCAAAATTAAGCT 57.209 28.000 0.00 0.00 0.00 3.74
7318 10059 6.675987 AGTGCAAAATTAAGCTCTTCTTCTG 58.324 36.000 0.00 0.00 36.25 3.02
7319 10060 6.488006 AGTGCAAAATTAAGCTCTTCTTCTGA 59.512 34.615 0.00 0.00 36.25 3.27
7355 10096 4.558226 TTCACACATAAGGCTGATGTCT 57.442 40.909 14.86 0.11 35.31 3.41
7356 10097 4.558226 TCACACATAAGGCTGATGTCTT 57.442 40.909 14.86 2.24 41.52 3.01
7357 10098 4.256110 TCACACATAAGGCTGATGTCTTG 58.744 43.478 14.86 14.20 38.73 3.02
7358 10099 3.376234 CACACATAAGGCTGATGTCTTGG 59.624 47.826 14.86 6.51 38.73 3.61
7360 10101 2.578021 ACATAAGGCTGATGTCTTGGGT 59.422 45.455 11.95 0.00 38.73 4.51
7361 10102 3.209410 CATAAGGCTGATGTCTTGGGTC 58.791 50.000 3.44 0.00 38.73 4.46
7362 10103 1.067295 AAGGCTGATGTCTTGGGTCA 58.933 50.000 0.00 0.00 36.67 4.02
7380 10126 7.546250 TGGGTCATGTTGTGGTTTAAATATT 57.454 32.000 0.00 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.795972 TGTTCAATTGTTCATCATTGCCAT 58.204 33.333 5.13 0.00 0.00 4.40
4 5 4.927425 AGCTGTTCAATTGTTCATCATTGC 59.073 37.500 5.13 5.74 0.00 3.56
5 6 7.416154 AAAGCTGTTCAATTGTTCATCATTG 57.584 32.000 5.13 0.00 0.00 2.82
6 7 8.441312 AAAAAGCTGTTCAATTGTTCATCATT 57.559 26.923 5.13 0.00 0.00 2.57
59 60 3.628032 TCGTTGTACTGCCATGTTTGAAA 59.372 39.130 0.00 0.00 0.00 2.69
65 66 7.618502 TTTTATATTCGTTGTACTGCCATGT 57.381 32.000 0.00 0.00 0.00 3.21
106 107 0.335361 AGGTGGTCTACGGATCTGGT 59.665 55.000 6.47 0.78 0.00 4.00
138 139 2.715532 TTCGGCTCGCTTCAGTGCTT 62.716 55.000 0.00 0.00 0.00 3.91
300 301 3.623510 GTGTCTTCGGATTGGATCTTTCC 59.376 47.826 0.00 0.00 42.94 3.13
371 372 1.591703 GTGTGTCTCTGGCGGATCA 59.408 57.895 0.00 0.00 0.00 2.92
380 381 2.041976 CGTGTGGAGGTGTGTCTCT 58.958 57.895 0.00 0.00 34.39 3.10
495 496 5.442391 AGTTTTGCTAAGGTTTGTGTCCTA 58.558 37.500 0.00 0.00 34.56 2.94
508 509 6.348621 AGTCGTTTCGTTTAGTTTTGCTAA 57.651 33.333 0.00 0.00 37.86 3.09
519 520 4.783136 GCTCCGTTTTTAGTCGTTTCGTTT 60.783 41.667 0.00 0.00 0.00 3.60
522 523 2.410646 GGCTCCGTTTTTAGTCGTTTCG 60.411 50.000 0.00 0.00 0.00 3.46
635 636 4.038763 CCTCCACAAAAAGTTAGGGTTTCC 59.961 45.833 0.00 0.00 30.40 3.13
652 653 3.775654 CGCCACCTCCTCCTCCAC 61.776 72.222 0.00 0.00 0.00 4.02
680 683 0.727793 GTTGCCACGTACAATTGCGG 60.728 55.000 5.05 0.00 34.72 5.69
685 688 4.202060 TGTTCAATTGTTGCCACGTACAAT 60.202 37.500 8.30 8.30 44.50 2.71
686 689 3.128764 TGTTCAATTGTTGCCACGTACAA 59.871 39.130 5.13 4.22 38.50 2.41
687 690 2.683362 TGTTCAATTGTTGCCACGTACA 59.317 40.909 5.13 0.00 0.00 2.90
688 691 3.242936 ACTGTTCAATTGTTGCCACGTAC 60.243 43.478 5.13 0.00 0.00 3.67
689 692 2.946329 ACTGTTCAATTGTTGCCACGTA 59.054 40.909 5.13 0.00 0.00 3.57
690 693 1.748493 ACTGTTCAATTGTTGCCACGT 59.252 42.857 5.13 0.00 0.00 4.49
691 694 2.490328 ACTGTTCAATTGTTGCCACG 57.510 45.000 5.13 0.00 0.00 4.94
692 695 2.865551 CCAACTGTTCAATTGTTGCCAC 59.134 45.455 5.13 0.00 39.53 5.01
693 696 2.762887 TCCAACTGTTCAATTGTTGCCA 59.237 40.909 5.13 0.00 39.53 4.92
694 697 3.451141 TCCAACTGTTCAATTGTTGCC 57.549 42.857 5.13 0.00 39.53 4.52
695 698 5.772521 ACTATCCAACTGTTCAATTGTTGC 58.227 37.500 5.13 0.00 39.53 4.17
696 699 6.016360 TGGACTATCCAACTGTTCAATTGTTG 60.016 38.462 5.13 2.17 45.00 3.33
712 715 4.762289 AGTTGAATGTCCTGGACTATCC 57.238 45.455 26.03 13.49 36.96 2.59
726 729 7.335422 AGCGATCTTAGTTGAATGAAGTTGAAT 59.665 33.333 0.00 0.00 0.00 2.57
808 811 2.221169 TGCGTTTCTTGCAATCAGAGT 58.779 42.857 0.00 0.00 39.87 3.24
878 881 5.421056 TCGCTCTCCTTATTCCTTTCTTGTA 59.579 40.000 0.00 0.00 0.00 2.41
879 882 4.223032 TCGCTCTCCTTATTCCTTTCTTGT 59.777 41.667 0.00 0.00 0.00 3.16
1042 1056 2.080286 AAGAGTATGCACGTGTGACC 57.920 50.000 18.38 0.09 0.00 4.02
1422 1445 8.797350 TGCATCCCACATCAAATAGATAATAG 57.203 34.615 0.00 0.00 34.43 1.73
1427 1450 5.243060 CACATGCATCCCACATCAAATAGAT 59.757 40.000 0.00 0.00 37.48 1.98
1428 1451 4.581409 CACATGCATCCCACATCAAATAGA 59.419 41.667 0.00 0.00 0.00 1.98
1429 1452 4.581409 TCACATGCATCCCACATCAAATAG 59.419 41.667 0.00 0.00 0.00 1.73
1479 1504 7.161773 ACATCAATGGAACCTTAGTGAATTG 57.838 36.000 0.00 0.00 0.00 2.32
1494 1519 6.983307 TCAACTTGGTAAACAAACATCAATGG 59.017 34.615 0.00 0.00 38.91 3.16
1568 1593 2.076863 GCTACTTGCGAATGTTGAGGT 58.923 47.619 0.00 0.00 0.00 3.85
1646 1673 2.743538 GCATGGCTCTCACACGCA 60.744 61.111 0.00 0.00 0.00 5.24
1669 1696 3.501911 CCTGCATAGGGGTGGGGG 61.502 72.222 0.00 0.00 40.63 5.40
1670 1697 4.209866 GCCTGCATAGGGGTGGGG 62.210 72.222 0.00 0.00 44.75 4.96
1671 1698 4.209866 GGCCTGCATAGGGGTGGG 62.210 72.222 0.00 0.00 44.75 4.61
1672 1699 4.209866 GGGCCTGCATAGGGGTGG 62.210 72.222 0.84 0.00 44.75 4.61
1673 1700 4.209866 GGGGCCTGCATAGGGGTG 62.210 72.222 0.84 0.00 44.75 4.61
1686 1713 2.044352 ATTGTTGGTAGGCGGGGC 60.044 61.111 0.00 0.00 0.00 5.80
1687 1714 0.610785 AACATTGTTGGTAGGCGGGG 60.611 55.000 0.15 0.00 0.00 5.73
1688 1715 0.525761 CAACATTGTTGGTAGGCGGG 59.474 55.000 19.66 0.00 0.00 6.13
1689 1716 1.529226 TCAACATTGTTGGTAGGCGG 58.471 50.000 25.16 1.88 0.00 6.13
1690 1717 2.351350 GGTTCAACATTGTTGGTAGGCG 60.351 50.000 25.16 2.56 0.00 5.52
1691 1718 2.890945 AGGTTCAACATTGTTGGTAGGC 59.109 45.455 25.16 12.86 0.00 3.93
1692 1719 4.870363 CAAGGTTCAACATTGTTGGTAGG 58.130 43.478 25.16 9.94 35.40 3.18
1711 1738 3.114616 CGCGCCTGAGTGGACAAG 61.115 66.667 0.00 0.00 38.35 3.16
1722 1749 2.583593 GAAGAATCGCTCGCGCCT 60.584 61.111 0.00 1.00 39.59 5.52
1732 1759 5.213891 ACAAAATGGTGTTGGGAAGAATC 57.786 39.130 0.00 0.00 0.00 2.52
1744 1771 3.085443 TGCGGTAACAACAAAATGGTG 57.915 42.857 0.00 0.00 41.80 4.17
1745 1772 3.572255 AGATGCGGTAACAACAAAATGGT 59.428 39.130 0.00 0.00 0.00 3.55
1746 1773 3.919804 CAGATGCGGTAACAACAAAATGG 59.080 43.478 0.00 0.00 0.00 3.16
1747 1774 3.919804 CCAGATGCGGTAACAACAAAATG 59.080 43.478 0.00 0.00 0.00 2.32
1748 1775 3.572255 ACCAGATGCGGTAACAACAAAAT 59.428 39.130 0.00 0.00 37.57 1.82
1752 1779 2.147958 GAACCAGATGCGGTAACAACA 58.852 47.619 0.00 0.00 38.76 3.33
1753 1780 2.159627 CAGAACCAGATGCGGTAACAAC 59.840 50.000 0.00 0.00 38.76 3.32
1755 1782 1.943968 GCAGAACCAGATGCGGTAACA 60.944 52.381 0.00 0.00 38.76 2.41
1805 1985 0.395036 CACCATGGGCGTTAATGGGA 60.395 55.000 18.09 0.00 46.45 4.37
1873 2062 1.675641 GCCTTGTCGGTTCCAGCAT 60.676 57.895 0.00 0.00 34.25 3.79
1885 2074 2.945008 CGATTGTACCATGATGCCTTGT 59.055 45.455 0.00 0.00 0.00 3.16
1898 2087 1.275657 CGCCGATTGCCGATTGTAC 59.724 57.895 0.00 0.00 41.76 2.90
1938 2127 1.593209 TCACCGCGTCTTCAACACC 60.593 57.895 4.92 0.00 0.00 4.16
1939 2128 1.563173 GTCACCGCGTCTTCAACAC 59.437 57.895 4.92 0.00 0.00 3.32
1960 2149 4.323477 TTGGCCGGTTCCAGGACG 62.323 66.667 1.90 0.00 40.49 4.79
1976 2165 3.885297 ACTGCAGTTGTAGCAAAGATGTT 59.115 39.130 15.25 0.00 42.17 2.71
2038 2227 1.048601 TTCCAGCTTTGTCGTCCTCT 58.951 50.000 0.00 0.00 0.00 3.69
2065 2320 0.318614 CACCGTTGCAACATCCCAAC 60.319 55.000 28.01 0.24 38.30 3.77
2098 2353 2.261671 GAGTTCCGGCTTCTCGCA 59.738 61.111 0.00 0.00 41.67 5.10
2108 2363 0.597637 ACTGTCAACTGCGAGTTCCG 60.598 55.000 0.00 0.00 36.03 4.30
2125 2380 1.298014 GCAGCCTAGTTCCAGCACT 59.702 57.895 0.00 0.00 0.00 4.40
2128 2383 2.332063 TTATGCAGCCTAGTTCCAGC 57.668 50.000 0.00 0.00 0.00 4.85
2145 2400 1.083489 CGACTTGGATGCGGCTTTTA 58.917 50.000 0.00 0.00 0.00 1.52
2156 2411 2.343758 GAGCACTGCCGACTTGGA 59.656 61.111 0.00 0.00 42.00 3.53
2167 2422 1.609501 TCTAGCAACCCCGAGCACT 60.610 57.895 0.00 0.00 0.00 4.40
2187 2442 3.631686 CACATTAATTTCCCTCGCCATCA 59.368 43.478 0.00 0.00 0.00 3.07
2200 2455 7.788026 AGAATGCATCATTGGTCACATTAATT 58.212 30.769 0.00 0.00 33.90 1.40
2210 2465 3.021695 CACAGGAGAATGCATCATTGGT 58.978 45.455 0.00 0.00 33.90 3.67
2213 2468 4.232188 AGTCACAGGAGAATGCATCATT 57.768 40.909 0.00 0.00 36.72 2.57
2221 2476 2.625790 GCCTCGATAGTCACAGGAGAAT 59.374 50.000 0.00 0.00 37.40 2.40
2234 2489 1.211703 TCCCAGCAAAATGCCTCGATA 59.788 47.619 0.00 0.00 46.52 2.92
2235 2490 0.034186 TCCCAGCAAAATGCCTCGAT 60.034 50.000 0.00 0.00 46.52 3.59
2270 2525 1.669265 CTATAGTCGAGTGGTCGCACA 59.331 52.381 2.10 0.00 46.39 4.57
2373 2628 1.603455 CACGACCCACTGCCCATTT 60.603 57.895 0.00 0.00 0.00 2.32
2517 2772 6.673106 TCATGAACAGCTTTAATACGCAAAA 58.327 32.000 0.00 0.00 0.00 2.44
2518 2773 6.247727 TCATGAACAGCTTTAATACGCAAA 57.752 33.333 0.00 0.00 0.00 3.68
2525 2780 9.985730 TTCTTCAAATTCATGAACAGCTTTAAT 57.014 25.926 11.07 0.00 35.55 1.40
2532 2787 7.948363 GCGAAATTTCTTCAAATTCATGAACAG 59.052 33.333 11.07 3.81 40.68 3.16
2801 3159 9.549078 AAACCCGTGAACATTTTTAAAATATGT 57.451 25.926 16.39 16.39 34.14 2.29
2803 3161 9.765795 TGAAACCCGTGAACATTTTTAAAATAT 57.234 25.926 0.55 0.00 0.00 1.28
2804 3162 9.595823 TTGAAACCCGTGAACATTTTTAAAATA 57.404 25.926 0.55 0.00 0.00 1.40
2805 3163 8.494016 TTGAAACCCGTGAACATTTTTAAAAT 57.506 26.923 0.55 0.00 0.00 1.82
2806 3164 7.900782 TTGAAACCCGTGAACATTTTTAAAA 57.099 28.000 0.00 0.00 0.00 1.52
2807 3165 8.494016 AATTGAAACCCGTGAACATTTTTAAA 57.506 26.923 0.00 0.00 0.00 1.52
2808 3166 8.494016 AAATTGAAACCCGTGAACATTTTTAA 57.506 26.923 0.00 0.00 0.00 1.52
2809 3167 8.494016 AAAATTGAAACCCGTGAACATTTTTA 57.506 26.923 0.00 0.00 0.00 1.52
2810 3168 6.993786 AAATTGAAACCCGTGAACATTTTT 57.006 29.167 0.00 0.00 0.00 1.94
2811 3169 6.993786 AAAATTGAAACCCGTGAACATTTT 57.006 29.167 0.00 0.00 0.00 1.82
2812 3170 6.993786 AAAAATTGAAACCCGTGAACATTT 57.006 29.167 0.00 0.00 0.00 2.32
2888 3246 7.479980 TGTTTTGAAACTCGTGATCATTTCTT 58.520 30.769 16.52 1.69 39.59 2.52
2890 3248 7.678194 TTGTTTTGAAACTCGTGATCATTTC 57.322 32.000 11.08 11.08 39.59 2.17
2896 3254 6.183360 GCAAACTTTGTTTTGAAACTCGTGAT 60.183 34.615 7.97 0.00 38.54 3.06
3006 3365 6.917477 CGAACATCTTTCAGAAAAATTGGACA 59.083 34.615 0.00 0.00 0.00 4.02
3007 3366 7.138736 TCGAACATCTTTCAGAAAAATTGGAC 58.861 34.615 0.00 0.00 0.00 4.02
3008 3367 7.270757 TCGAACATCTTTCAGAAAAATTGGA 57.729 32.000 0.00 0.00 0.00 3.53
3009 3368 7.928908 TTCGAACATCTTTCAGAAAAATTGG 57.071 32.000 0.00 0.00 0.00 3.16
3144 3503 3.757493 TGTGCCCGAACCGTATTTTATTT 59.243 39.130 0.00 0.00 0.00 1.40
3152 3511 1.079681 GACATGTGCCCGAACCGTA 60.080 57.895 1.15 0.00 0.00 4.02
3158 3517 1.449423 CCATTCGACATGTGCCCGA 60.449 57.895 1.15 3.03 0.00 5.14
3159 3518 2.472059 CCCATTCGACATGTGCCCG 61.472 63.158 1.15 0.00 0.00 6.13
3167 3526 1.271707 GGGTTTCTTCCCCATTCGACA 60.272 52.381 0.00 0.00 42.15 4.35
3200 3559 1.429148 GCGCCCGATACTCTGTTTGG 61.429 60.000 0.00 0.00 0.00 3.28
3205 3564 2.050895 CGAGCGCCCGATACTCTG 60.051 66.667 4.91 0.00 0.00 3.35
3210 3569 3.592814 CCACTCGAGCGCCCGATA 61.593 66.667 16.16 0.00 37.96 2.92
3333 3973 5.220491 CGAGCAGGTATACAGCTTTCTTTTC 60.220 44.000 19.20 7.65 39.02 2.29
3338 3978 1.861575 GCGAGCAGGTATACAGCTTTC 59.138 52.381 19.20 12.19 39.02 2.62
3339 3979 1.473434 GGCGAGCAGGTATACAGCTTT 60.473 52.381 19.20 3.07 39.02 3.51
3340 3980 0.105039 GGCGAGCAGGTATACAGCTT 59.895 55.000 19.20 7.16 39.02 3.74
3341 3981 1.742768 GGCGAGCAGGTATACAGCT 59.257 57.895 18.52 18.52 42.17 4.24
3342 3982 1.301009 GGGCGAGCAGGTATACAGC 60.301 63.158 5.01 8.24 0.00 4.40
3383 4284 1.334869 CCAAGACTTGTTGCTGGTCAC 59.665 52.381 14.03 0.00 32.98 3.67
3388 4289 3.629398 AGAAAGACCAAGACTTGTTGCTG 59.371 43.478 14.03 1.03 0.00 4.41
3431 4332 2.856988 TGGGTGGGGTGGAAGACC 60.857 66.667 0.00 0.00 45.28 3.85
3573 4477 0.815615 GGAGGGGCGCTGATAAGTTG 60.816 60.000 9.52 0.00 0.00 3.16
3577 4481 0.108585 GAATGGAGGGGCGCTGATAA 59.891 55.000 9.52 0.00 0.00 1.75
3619 4523 1.546476 ACCACAACGGAAGAGAGCTAG 59.454 52.381 0.00 0.00 38.63 3.42
3620 4524 1.629043 ACCACAACGGAAGAGAGCTA 58.371 50.000 0.00 0.00 38.63 3.32
3621 4525 0.759346 AACCACAACGGAAGAGAGCT 59.241 50.000 0.00 0.00 38.63 4.09
3632 4536 0.249826 CATTGGGCCACAACCACAAC 60.250 55.000 5.23 0.00 42.94 3.32
3639 4543 1.532794 GTGGGTCATTGGGCCACAA 60.533 57.895 5.23 7.14 44.54 3.33
3696 4606 9.672086 CGTAGATAAACTCGTAGTAGTAGTAGT 57.328 37.037 0.00 0.00 0.00 2.73
3697 4607 9.885934 TCGTAGATAAACTCGTAGTAGTAGTAG 57.114 37.037 0.00 0.00 0.00 2.57
3699 4609 9.243637 CTTCGTAGATAAACTCGTAGTAGTAGT 57.756 37.037 0.00 0.00 35.04 2.73
3700 4610 8.213812 GCTTCGTAGATAAACTCGTAGTAGTAG 58.786 40.741 0.00 0.00 35.04 2.57
3701 4611 7.923344 AGCTTCGTAGATAAACTCGTAGTAGTA 59.077 37.037 0.00 0.00 35.04 1.82
3729 4639 7.506261 ACAGGATAAACTCGTACATTAGGAGAT 59.494 37.037 9.33 0.00 41.83 2.75
3742 4652 2.561733 TCTGCGACAGGATAAACTCG 57.438 50.000 6.95 0.00 31.51 4.18
3743 4653 4.926238 CCATATCTGCGACAGGATAAACTC 59.074 45.833 6.95 0.00 31.51 3.01
3745 4655 4.883083 TCCATATCTGCGACAGGATAAAC 58.117 43.478 6.95 0.00 31.51 2.01
3746 4656 5.012046 ACATCCATATCTGCGACAGGATAAA 59.988 40.000 6.95 0.00 34.30 1.40
3747 4657 4.528206 ACATCCATATCTGCGACAGGATAA 59.472 41.667 6.95 0.00 34.30 1.75
3750 4660 2.319844 ACATCCATATCTGCGACAGGA 58.680 47.619 6.95 0.00 31.51 3.86
3751 4661 2.827800 ACATCCATATCTGCGACAGG 57.172 50.000 6.95 0.00 31.51 4.00
3752 4662 5.321959 AGATACATCCATATCTGCGACAG 57.678 43.478 0.00 0.00 39.87 3.51
3753 4663 6.180472 TCTAGATACATCCATATCTGCGACA 58.820 40.000 5.70 0.00 41.17 4.35
3754 4664 6.685527 TCTAGATACATCCATATCTGCGAC 57.314 41.667 5.70 0.00 41.17 5.19
3755 4665 6.830838 ACATCTAGATACATCCATATCTGCGA 59.169 38.462 4.54 3.39 41.17 5.10
3756 4666 7.036996 ACATCTAGATACATCCATATCTGCG 57.963 40.000 4.54 0.00 41.17 5.18
3783 4693 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
3784 4694 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
3785 4695 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
3786 4696 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
3787 4697 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
3788 4698 6.216569 GTCGCAGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 39.69 2.10
3789 4699 5.562890 CGTCGCAGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 39.69 2.43
3790 4700 4.618912 CGTCGCAGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 39.69 2.43
3791 4701 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
3792 4702 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
3793 4703 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
3794 4704 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
3795 4705 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
3796 4706 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
3797 4707 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
3798 4708 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
3799 4709 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
3800 4710 4.334443 CAAATTACTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
3801 4711 4.092821 TCCAAATTACTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
3802 4712 4.250464 TCCAAATTACTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
3803 4713 3.655486 TCCAAATTACTCGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
3804 4714 3.306917 TCCAAATTACTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
3805 4715 2.991190 GTTCCAAATTACTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
3806 4716 2.734606 TGTTCCAAATTACTCGTCGCAG 59.265 45.455 0.00 0.00 0.00 5.18
3807 4717 2.734606 CTGTTCCAAATTACTCGTCGCA 59.265 45.455 0.00 0.00 0.00 5.10
3808 4718 2.991190 TCTGTTCCAAATTACTCGTCGC 59.009 45.455 0.00 0.00 0.00 5.19
3809 4719 3.612860 CCTCTGTTCCAAATTACTCGTCG 59.387 47.826 0.00 0.00 0.00 5.12
3810 4720 3.933332 CCCTCTGTTCCAAATTACTCGTC 59.067 47.826 0.00 0.00 0.00 4.20
3811 4721 3.581332 TCCCTCTGTTCCAAATTACTCGT 59.419 43.478 0.00 0.00 0.00 4.18
3812 4722 4.184629 CTCCCTCTGTTCCAAATTACTCG 58.815 47.826 0.00 0.00 0.00 4.18
3813 4723 5.167303 ACTCCCTCTGTTCCAAATTACTC 57.833 43.478 0.00 0.00 0.00 2.59
3814 4724 5.338463 GCTACTCCCTCTGTTCCAAATTACT 60.338 44.000 0.00 0.00 0.00 2.24
3815 4725 4.876679 GCTACTCCCTCTGTTCCAAATTAC 59.123 45.833 0.00 0.00 0.00 1.89
3816 4726 4.783227 AGCTACTCCCTCTGTTCCAAATTA 59.217 41.667 0.00 0.00 0.00 1.40
3817 4727 3.589288 AGCTACTCCCTCTGTTCCAAATT 59.411 43.478 0.00 0.00 0.00 1.82
3818 4728 3.185455 AGCTACTCCCTCTGTTCCAAAT 58.815 45.455 0.00 0.00 0.00 2.32
3819 4729 2.567615 GAGCTACTCCCTCTGTTCCAAA 59.432 50.000 0.00 0.00 0.00 3.28
3820 4730 2.180276 GAGCTACTCCCTCTGTTCCAA 58.820 52.381 0.00 0.00 0.00 3.53
3821 4731 1.077169 TGAGCTACTCCCTCTGTTCCA 59.923 52.381 0.00 0.00 0.00 3.53
3822 4732 1.478916 GTGAGCTACTCCCTCTGTTCC 59.521 57.143 0.00 0.00 0.00 3.62
3823 4733 2.165437 CAGTGAGCTACTCCCTCTGTTC 59.835 54.545 0.00 0.00 37.60 3.18
3824 4734 2.175202 CAGTGAGCTACTCCCTCTGTT 58.825 52.381 0.00 0.00 37.60 3.16
3825 4735 1.076350 ACAGTGAGCTACTCCCTCTGT 59.924 52.381 0.00 9.65 37.60 3.41
3826 4736 1.748493 GACAGTGAGCTACTCCCTCTG 59.252 57.143 0.00 0.00 37.60 3.35
3827 4737 1.680555 CGACAGTGAGCTACTCCCTCT 60.681 57.143 0.00 0.00 37.60 3.69
3828 4738 0.736053 CGACAGTGAGCTACTCCCTC 59.264 60.000 0.00 0.00 37.60 4.30
3829 4739 1.316706 GCGACAGTGAGCTACTCCCT 61.317 60.000 0.00 0.00 37.60 4.20
3830 4740 1.139947 GCGACAGTGAGCTACTCCC 59.860 63.158 0.00 0.00 37.60 4.30
3831 4741 0.179150 CAGCGACAGTGAGCTACTCC 60.179 60.000 15.23 0.00 42.52 3.85
3832 4742 0.523966 ACAGCGACAGTGAGCTACTC 59.476 55.000 15.23 0.00 42.52 2.59
3833 4743 1.822506 TACAGCGACAGTGAGCTACT 58.177 50.000 15.23 8.13 42.52 2.57
3840 4750 6.366332 AGAAGTAGAAATTTACAGCGACAGTG 59.634 38.462 0.00 0.00 0.00 3.66
3866 4776 2.166664 CAGAACCTCGGAACTCCTTAGG 59.833 54.545 10.86 10.86 40.61 2.69
3879 4801 6.625873 ACAAAAGAAGAATCACAGAACCTC 57.374 37.500 0.00 0.00 0.00 3.85
3881 4803 7.648112 GGTTAACAAAAGAAGAATCACAGAACC 59.352 37.037 8.10 0.00 0.00 3.62
3885 4807 7.707104 ACAGGTTAACAAAAGAAGAATCACAG 58.293 34.615 8.10 0.00 0.00 3.66
3933 4855 8.784043 TGCTTTTCTTTCTAGGTAAGATTCAAC 58.216 33.333 8.44 1.68 33.05 3.18
3938 4860 6.476378 TGCTGCTTTTCTTTCTAGGTAAGAT 58.524 36.000 0.00 0.00 33.05 2.40
3945 4867 5.049818 CGGGATATGCTGCTTTTCTTTCTAG 60.050 44.000 0.00 0.00 0.00 2.43
3947 4869 3.629398 CGGGATATGCTGCTTTTCTTTCT 59.371 43.478 0.00 0.00 0.00 2.52
3952 4876 3.549299 CATCGGGATATGCTGCTTTTC 57.451 47.619 0.00 0.00 0.00 2.29
3966 4890 4.155826 TGTTATTTGTCTTCAAGCATCGGG 59.844 41.667 0.00 0.00 34.88 5.14
3987 4911 8.641498 AAACTTTCTGTGATAATGAGGATTGT 57.359 30.769 0.00 0.00 0.00 2.71
3988 4912 9.350357 CAAAACTTTCTGTGATAATGAGGATTG 57.650 33.333 0.00 0.00 0.00 2.67
4033 4957 8.012809 CCAACATGAATGTGACAAAATGATTTG 58.987 33.333 0.00 0.03 44.82 2.32
4063 4987 0.877071 AAGTCGCAGCAAATGTCCAG 59.123 50.000 0.00 0.00 0.00 3.86
4131 5055 0.883833 GGAAATGTGGTCAGCCTGTG 59.116 55.000 0.00 0.00 35.27 3.66
4160 5084 5.444122 GCTACACTGCTTCTTTACAAACTG 58.556 41.667 0.00 0.00 0.00 3.16
4170 5094 1.002544 GAACCTGGCTACACTGCTTCT 59.997 52.381 0.00 0.00 0.00 2.85
4179 5103 0.685097 TGTGGACTGAACCTGGCTAC 59.315 55.000 0.00 0.00 0.00 3.58
4283 5239 7.519002 AGCAAACTAATGAAATGAGTTACGTC 58.481 34.615 0.00 0.00 33.13 4.34
4322 5282 7.558081 TGCAAGTTAAATTGGCCACTGTATATA 59.442 33.333 16.64 0.00 0.00 0.86
4323 5283 6.379703 TGCAAGTTAAATTGGCCACTGTATAT 59.620 34.615 16.64 0.00 0.00 0.86
4324 5284 5.712446 TGCAAGTTAAATTGGCCACTGTATA 59.288 36.000 16.64 0.00 0.00 1.47
4325 5285 4.526262 TGCAAGTTAAATTGGCCACTGTAT 59.474 37.500 16.64 0.00 0.00 2.29
4326 5286 3.891977 TGCAAGTTAAATTGGCCACTGTA 59.108 39.130 16.64 0.00 0.00 2.74
4365 5338 2.498167 CTCCCACTGAAACTGTTGGAG 58.502 52.381 11.92 11.92 38.27 3.86
4439 5412 1.193323 AGCTGAGGATCACCAGAGTG 58.807 55.000 15.22 0.00 42.56 3.51
4440 5413 1.830477 GAAGCTGAGGATCACCAGAGT 59.170 52.381 15.22 4.22 42.56 3.24
4466 5439 0.619832 AGCAGAGGAGGATGGCTTGA 60.620 55.000 0.00 0.00 0.00 3.02
4508 5481 2.925170 AGCACACCCGAGGCTTCT 60.925 61.111 0.00 0.00 33.21 2.85
4644 5623 1.750399 AGAATGGCACCATCCGCAC 60.750 57.895 1.88 0.00 35.31 5.34
4847 5826 2.528797 GGTGACGAACATCAACGCT 58.471 52.632 0.00 0.00 0.00 5.07
4930 5909 3.499050 CGTCGTCATCGAGGGACT 58.501 61.111 15.45 0.00 46.96 3.85
4961 5940 1.307170 ATGGTAAGGGCCACCGGTA 60.307 57.895 6.87 0.00 41.94 4.02
5090 6069 0.457853 GCCGCATGACTTCGTACTCA 60.458 55.000 0.00 0.00 0.00 3.41
5141 6120 0.037303 CCATAGCGGCCAGATGGAAT 59.963 55.000 18.64 0.00 42.41 3.01
5253 6232 3.722295 CACAAACGCGGCGACCAT 61.722 61.111 30.94 8.77 0.00 3.55
5285 6264 1.254975 TGCTGTAGGCGTCCTTGCTA 61.255 55.000 3.71 0.00 45.43 3.49
5399 6378 4.155733 CGGGCATGGTAGGACGCA 62.156 66.667 0.00 0.00 0.00 5.24
5459 6438 3.751767 TGCTCCAACCTTGAGCATT 57.248 47.368 10.65 0.00 45.62 3.56
5774 6753 0.901827 ACACCATGATGCTACGGTCA 59.098 50.000 0.00 0.00 0.00 4.02
6036 7015 4.262207 GGCTATCTTGTTGATGATCTCCGA 60.262 45.833 0.00 0.00 36.65 4.55
6075 7054 0.395311 TACTCCTGCCTCGAATCGGT 60.395 55.000 1.76 0.00 0.00 4.69
6077 7056 0.738975 TGTACTCCTGCCTCGAATCG 59.261 55.000 0.00 0.00 0.00 3.34
6088 7067 2.223971 CCGATGCCGTAAATGTACTCCT 60.224 50.000 0.00 0.00 0.00 3.69
6089 7068 2.132762 CCGATGCCGTAAATGTACTCC 58.867 52.381 0.00 0.00 0.00 3.85
6131 7110 1.305802 ATAGACCGGCCTGTCACCA 60.306 57.895 26.72 13.17 37.73 4.17
6134 7113 2.900273 GCATAGACCGGCCTGTCA 59.100 61.111 26.72 14.35 37.73 3.58
6152 7131 4.593864 GCGAGCCAGGATCCGTCC 62.594 72.222 5.98 0.00 45.45 4.79
6181 7160 4.643387 AGTGCCACCTGTTCCCGC 62.643 66.667 0.00 0.00 0.00 6.13
6275 7254 2.525629 TTGGCGTGGGACTCCTCA 60.526 61.111 0.00 0.00 0.00 3.86
6284 7263 0.955428 TGCTTAGCTTCTTGGCGTGG 60.955 55.000 5.60 0.00 37.29 4.94
6327 7306 4.597004 CAATGCCCTATGATAAGCCAGAT 58.403 43.478 0.00 0.00 0.00 2.90
6347 7326 0.682292 TCTGTCGTACACCATGGCAA 59.318 50.000 13.04 0.00 0.00 4.52
6408 7387 1.521457 CTTGCGCGGAGGATTGCTA 60.521 57.895 8.83 0.00 0.00 3.49
6509 7488 0.593128 GCGTGCTTCAACATCAACCT 59.407 50.000 0.00 0.00 0.00 3.50
6510 7489 0.387239 GGCGTGCTTCAACATCAACC 60.387 55.000 0.00 0.00 0.00 3.77
6516 7510 0.179150 GTGTTTGGCGTGCTTCAACA 60.179 50.000 0.00 0.00 0.00 3.33
6527 7521 1.081242 CATGTGCTCGGTGTTTGGC 60.081 57.895 0.00 0.00 0.00 4.52
6535 7538 2.202388 CTTTGCGCATGTGCTCGG 60.202 61.111 29.79 16.06 39.32 4.63
6537 7540 0.169672 ATGTCTTTGCGCATGTGCTC 59.830 50.000 29.79 15.63 39.32 4.26
6540 7543 1.609932 GTGATGTCTTTGCGCATGTG 58.390 50.000 12.75 4.51 0.00 3.21
6541 7544 0.523072 GGTGATGTCTTTGCGCATGT 59.477 50.000 12.75 0.00 0.00 3.21
6542 7545 0.522626 TGGTGATGTCTTTGCGCATG 59.477 50.000 12.75 7.88 0.00 4.06
6543 7546 1.246649 TTGGTGATGTCTTTGCGCAT 58.753 45.000 12.75 0.00 0.00 4.73
6547 7550 5.537188 TGGTTTTATTGGTGATGTCTTTGC 58.463 37.500 0.00 0.00 0.00 3.68
6597 7600 9.971922 GGCACTTGCATCTCTTAATAAAATTAT 57.028 29.630 3.15 0.00 44.36 1.28
6646 7649 9.494271 GCTGTTGAATCACTTGGATATATAAGA 57.506 33.333 2.83 0.00 34.28 2.10
6649 7652 6.368791 GCGCTGTTGAATCACTTGGATATATA 59.631 38.462 0.00 0.00 34.28 0.86
6671 7726 3.746949 ATGCAGTAGAGCCCAGCGC 62.747 63.158 0.00 0.00 37.98 5.92
6672 7727 1.886313 CATGCAGTAGAGCCCAGCG 60.886 63.158 0.00 0.00 0.00 5.18
6847 7915 8.915057 AATATTCCATAAGAGTTGACTCCATG 57.085 34.615 7.50 10.71 43.88 3.66
6848 7916 9.927081 AAAATATTCCATAAGAGTTGACTCCAT 57.073 29.630 7.50 0.64 43.88 3.41
6849 7917 9.177608 CAAAATATTCCATAAGAGTTGACTCCA 57.822 33.333 7.50 0.00 43.88 3.86
6851 7919 9.994432 CACAAAATATTCCATAAGAGTTGACTC 57.006 33.333 2.93 2.93 43.17 3.36
6852 7920 9.520515 ACACAAAATATTCCATAAGAGTTGACT 57.479 29.630 0.00 0.00 0.00 3.41
6855 7923 9.357652 CCAACACAAAATATTCCATAAGAGTTG 57.642 33.333 0.00 0.00 0.00 3.16
6856 7924 9.308000 TCCAACACAAAATATTCCATAAGAGTT 57.692 29.630 0.00 0.00 0.00 3.01
6857 7925 8.877864 TCCAACACAAAATATTCCATAAGAGT 57.122 30.769 0.00 0.00 0.00 3.24
6896 7965 9.614792 AACACAAGTTAGTTATTCTCAGAGTTT 57.385 29.630 0.00 0.00 35.85 2.66
6905 7974 9.919348 TTGTTACGAAACACAAGTTAGTTATTC 57.081 29.630 0.00 0.00 45.18 1.75
6919 7988 6.799441 CGATTCATCCAATTTGTTACGAAACA 59.201 34.615 0.00 0.00 43.85 2.83
6921 7990 6.072397 ACCGATTCATCCAATTTGTTACGAAA 60.072 34.615 0.00 0.00 0.00 3.46
6933 8002 2.364002 TCGAGCATACCGATTCATCCAA 59.636 45.455 0.00 0.00 0.00 3.53
6946 8015 4.495911 TGCAAACAAACAATCGAGCATA 57.504 36.364 0.00 0.00 0.00 3.14
6985 8660 8.960591 ACTTCCTAATGAACGAATGATCAAAAT 58.039 29.630 0.00 0.00 30.09 1.82
7007 8682 6.317789 TCAAATCATCTGGAACAACACTTC 57.682 37.500 0.00 0.00 38.70 3.01
7023 8698 9.893634 AGGCATGAATTCAAATTTATCAAATCA 57.106 25.926 13.09 0.00 0.00 2.57
7029 8704 8.721019 TTGGAAGGCATGAATTCAAATTTATC 57.279 30.769 13.09 7.03 0.00 1.75
7031 8706 7.553402 CCATTGGAAGGCATGAATTCAAATTTA 59.447 33.333 13.09 0.00 28.58 1.40
7035 8710 4.531339 TCCATTGGAAGGCATGAATTCAAA 59.469 37.500 13.09 0.00 0.00 2.69
7036 8711 4.095211 TCCATTGGAAGGCATGAATTCAA 58.905 39.130 13.09 0.00 0.00 2.69
7039 8714 2.433239 GCTCCATTGGAAGGCATGAATT 59.567 45.455 6.88 0.00 0.00 2.17
7040 8715 2.037144 GCTCCATTGGAAGGCATGAAT 58.963 47.619 6.88 0.00 0.00 2.57
7042 8717 0.332293 TGCTCCATTGGAAGGCATGA 59.668 50.000 13.94 0.00 29.79 3.07
7043 8718 1.340248 GATGCTCCATTGGAAGGCATG 59.660 52.381 27.84 9.46 41.54 4.06
7044 8719 1.700955 GATGCTCCATTGGAAGGCAT 58.299 50.000 24.73 24.73 43.27 4.40
7046 8721 1.450531 CCGATGCTCCATTGGAAGGC 61.451 60.000 6.88 8.34 45.73 4.35
7047 8722 0.820891 CCCGATGCTCCATTGGAAGG 60.821 60.000 6.88 5.53 45.73 3.46
7048 8723 0.107017 ACCCGATGCTCCATTGGAAG 60.107 55.000 6.88 2.61 45.73 3.46
7049 8724 0.394216 CACCCGATGCTCCATTGGAA 60.394 55.000 6.88 0.00 45.73 3.53
7050 8725 1.224315 CACCCGATGCTCCATTGGA 59.776 57.895 12.12 5.05 45.73 3.53
7051 8726 1.077501 ACACCCGATGCTCCATTGG 60.078 57.895 0.00 0.00 43.25 3.16
7052 8727 0.392863 TCACACCCGATGCTCCATTG 60.393 55.000 0.00 0.00 0.00 2.82
7053 8728 0.107508 CTCACACCCGATGCTCCATT 60.108 55.000 0.00 0.00 0.00 3.16
7054 8729 0.977627 TCTCACACCCGATGCTCCAT 60.978 55.000 0.00 0.00 0.00 3.41
7055 8730 0.977627 ATCTCACACCCGATGCTCCA 60.978 55.000 0.00 0.00 0.00 3.86
7056 8731 0.179000 AATCTCACACCCGATGCTCC 59.821 55.000 0.00 0.00 0.00 4.70
7057 8732 1.293924 CAATCTCACACCCGATGCTC 58.706 55.000 0.00 0.00 0.00 4.26
7058 8733 0.107508 CCAATCTCACACCCGATGCT 60.108 55.000 0.00 0.00 0.00 3.79
7059 8734 0.392998 ACCAATCTCACACCCGATGC 60.393 55.000 0.00 0.00 0.00 3.91
7060 8735 1.208052 AGACCAATCTCACACCCGATG 59.792 52.381 0.00 0.00 0.00 3.84
7061 8736 1.573108 AGACCAATCTCACACCCGAT 58.427 50.000 0.00 0.00 0.00 4.18
7062 8737 3.067011 AGACCAATCTCACACCCGA 57.933 52.632 0.00 0.00 0.00 5.14
7072 8747 8.147058 TCTTATTAAGCTGATGAGAGACCAATC 58.853 37.037 0.00 0.00 0.00 2.67
7074 8749 7.423844 TCTTATTAAGCTGATGAGAGACCAA 57.576 36.000 0.00 0.00 0.00 3.67
7075 8750 7.288621 TGATCTTATTAAGCTGATGAGAGACCA 59.711 37.037 9.64 6.08 0.00 4.02
7076 8751 7.665690 TGATCTTATTAAGCTGATGAGAGACC 58.334 38.462 9.64 4.32 0.00 3.85
7077 8752 9.709495 AATGATCTTATTAAGCTGATGAGAGAC 57.291 33.333 9.64 7.51 0.00 3.36
7085 8760 9.988815 GGAGAGTTAATGATCTTATTAAGCTGA 57.011 33.333 0.00 0.00 34.25 4.26
7095 8770 8.465201 GCAAATGAAAGGAGAGTTAATGATCTT 58.535 33.333 0.00 0.00 0.00 2.40
7097 8772 7.148018 TGGCAAATGAAAGGAGAGTTAATGATC 60.148 37.037 0.00 0.00 0.00 2.92
7098 8773 6.664816 TGGCAAATGAAAGGAGAGTTAATGAT 59.335 34.615 0.00 0.00 0.00 2.45
7099 8774 6.009589 TGGCAAATGAAAGGAGAGTTAATGA 58.990 36.000 0.00 0.00 0.00 2.57
7100 8775 6.271488 TGGCAAATGAAAGGAGAGTTAATG 57.729 37.500 0.00 0.00 0.00 1.90
7101 8776 6.438425 ACATGGCAAATGAAAGGAGAGTTAAT 59.562 34.615 5.69 0.00 0.00 1.40
7102 8777 5.774690 ACATGGCAAATGAAAGGAGAGTTAA 59.225 36.000 5.69 0.00 0.00 2.01
7104 8779 4.021719 CACATGGCAAATGAAAGGAGAGTT 60.022 41.667 5.69 0.00 0.00 3.01
7105 8780 3.508793 CACATGGCAAATGAAAGGAGAGT 59.491 43.478 5.69 0.00 0.00 3.24
7132 9873 2.035066 CACCTTGCTGGGAAACTTTGAG 59.965 50.000 2.69 0.00 41.11 3.02
7139 9880 2.158475 ACTCAATCACCTTGCTGGGAAA 60.158 45.455 2.69 0.00 41.11 3.13
7146 9887 4.305989 TCAAACAACTCAATCACCTTGC 57.694 40.909 0.00 0.00 34.66 4.01
7189 9930 3.744660 GCGATCCATAACCTTTCTCCAT 58.255 45.455 0.00 0.00 0.00 3.41
7201 9942 2.739292 GTACAAGCTTCGCGATCCATA 58.261 47.619 10.88 0.00 0.00 2.74
7202 9943 1.571919 GTACAAGCTTCGCGATCCAT 58.428 50.000 10.88 0.00 0.00 3.41
7204 9945 1.917921 CGTACAAGCTTCGCGATCC 59.082 57.895 10.88 3.67 0.00 3.36
7210 9951 3.474823 CGAATGCGTACAAGCTTCG 57.525 52.632 0.00 0.00 39.38 3.79
7222 9963 1.718757 CCCAGGCAGCTAACGAATGC 61.719 60.000 0.00 0.00 39.25 3.56
7254 9995 1.377333 CCCCCTTTCTGCTTCGGTC 60.377 63.158 0.00 0.00 0.00 4.79
7272 10013 4.817318 TTGATGTTTTAAATCCCCAGCC 57.183 40.909 0.00 0.00 0.00 4.85
7287 10028 6.752168 AGAGCTTAATTTTGCACTTTGATGT 58.248 32.000 0.00 0.00 0.00 3.06
7329 10070 7.776969 AGACATCAGCCTTATGTGTGAATTTAT 59.223 33.333 0.00 0.00 37.69 1.40
7338 10079 2.947652 CCCAAGACATCAGCCTTATGTG 59.052 50.000 0.00 0.00 37.69 3.21
7341 10082 2.846206 TGACCCAAGACATCAGCCTTAT 59.154 45.455 0.00 0.00 0.00 1.73
7355 10096 5.878406 ATTTAAACCACAACATGACCCAA 57.122 34.783 0.00 0.00 0.00 4.12
7356 10097 7.546250 AATATTTAAACCACAACATGACCCA 57.454 32.000 0.00 0.00 0.00 4.51
7357 10098 9.528018 CATAATATTTAAACCACAACATGACCC 57.472 33.333 0.00 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.