Multiple sequence alignment - TraesCS5A01G357100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G357100 | chr5A | 100.000 | 5138 | 0 | 0 | 1 | 5138 | 559096683 | 559091546 | 0.000000e+00 | 9489.0 |
1 | TraesCS5A01G357100 | chr5A | 74.674 | 1611 | 294 | 69 | 804 | 2358 | 89382642 | 89384194 | 1.220000e-170 | 610.0 |
2 | TraesCS5A01G357100 | chr5A | 95.588 | 136 | 6 | 0 | 4564 | 4699 | 225610777 | 225610642 | 8.660000e-53 | 219.0 |
3 | TraesCS5A01G357100 | chr5A | 86.364 | 132 | 16 | 2 | 2445 | 2575 | 89384860 | 89384990 | 5.360000e-30 | 143.0 |
4 | TraesCS5A01G357100 | chr5A | 90.741 | 54 | 1 | 3 | 3801 | 3850 | 309680265 | 309680212 | 9.230000e-08 | 69.4 |
5 | TraesCS5A01G357100 | chr5A | 88.136 | 59 | 1 | 5 | 3797 | 3850 | 316517711 | 316517654 | 1.190000e-06 | 65.8 |
6 | TraesCS5A01G357100 | chr5D | 95.721 | 3879 | 112 | 13 | 4 | 3850 | 443070553 | 443066697 | 0.000000e+00 | 6194.0 |
7 | TraesCS5A01G357100 | chr5D | 93.711 | 477 | 30 | 0 | 3961 | 4437 | 443066701 | 443066225 | 0.000000e+00 | 715.0 |
8 | TraesCS5A01G357100 | chr5D | 74.502 | 1655 | 311 | 69 | 802 | 2400 | 95049651 | 95051250 | 2.630000e-172 | 616.0 |
9 | TraesCS5A01G357100 | chr5D | 90.681 | 279 | 15 | 4 | 4718 | 4992 | 443066048 | 443065777 | 1.360000e-95 | 361.0 |
10 | TraesCS5A01G357100 | chr5D | 96.241 | 133 | 4 | 1 | 4566 | 4698 | 361648073 | 361647942 | 3.120000e-52 | 217.0 |
11 | TraesCS5A01G357100 | chr5D | 87.121 | 132 | 15 | 2 | 2445 | 2575 | 95051877 | 95052007 | 1.150000e-31 | 148.0 |
12 | TraesCS5A01G357100 | chr5D | 86.000 | 100 | 3 | 5 | 4893 | 4992 | 390571893 | 390571805 | 4.230000e-16 | 97.1 |
13 | TraesCS5A01G357100 | chr5D | 100.000 | 41 | 0 | 0 | 4479 | 4519 | 443066091 | 443066051 | 5.520000e-10 | 76.8 |
14 | TraesCS5A01G357100 | chr5D | 90.196 | 51 | 1 | 3 | 3804 | 3850 | 492288318 | 492288268 | 4.290000e-06 | 63.9 |
15 | TraesCS5A01G357100 | chr5B | 94.617 | 3474 | 114 | 21 | 397 | 3842 | 539313002 | 539309574 | 0.000000e+00 | 5312.0 |
16 | TraesCS5A01G357100 | chr5B | 96.491 | 399 | 13 | 1 | 4 | 402 | 539314047 | 539313650 | 0.000000e+00 | 658.0 |
17 | TraesCS5A01G357100 | chr5B | 89.038 | 520 | 27 | 10 | 3961 | 4478 | 539309581 | 539309090 | 7.310000e-173 | 617.0 |
18 | TraesCS5A01G357100 | chr5B | 78.373 | 934 | 171 | 21 | 2652 | 3574 | 78135160 | 78136073 | 1.240000e-160 | 577.0 |
19 | TraesCS5A01G357100 | chr5B | 79.579 | 617 | 109 | 10 | 2959 | 3574 | 102064860 | 102065460 | 4.760000e-115 | 425.0 |
20 | TraesCS5A01G357100 | chr5B | 90.909 | 297 | 15 | 7 | 4698 | 4992 | 539308926 | 539308640 | 6.240000e-104 | 388.0 |
21 | TraesCS5A01G357100 | chr5B | 97.826 | 92 | 2 | 0 | 4479 | 4570 | 539309020 | 539308929 | 5.320000e-35 | 159.0 |
22 | TraesCS5A01G357100 | chr7A | 97.656 | 128 | 3 | 0 | 4572 | 4699 | 442265755 | 442265882 | 2.410000e-53 | 220.0 |
23 | TraesCS5A01G357100 | chr7A | 86.400 | 125 | 10 | 5 | 5014 | 5137 | 671464520 | 671464402 | 4.180000e-26 | 130.0 |
24 | TraesCS5A01G357100 | chr6A | 96.970 | 132 | 3 | 1 | 4572 | 4703 | 32749188 | 32749058 | 2.410000e-53 | 220.0 |
25 | TraesCS5A01G357100 | chr6A | 89.655 | 58 | 2 | 1 | 3797 | 3850 | 604890757 | 604890700 | 2.570000e-08 | 71.3 |
26 | TraesCS5A01G357100 | chr3D | 96.899 | 129 | 4 | 0 | 4571 | 4699 | 496172883 | 496172755 | 3.120000e-52 | 217.0 |
27 | TraesCS5A01G357100 | chr3D | 94.444 | 126 | 7 | 0 | 3845 | 3970 | 549062458 | 549062333 | 1.460000e-45 | 195.0 |
28 | TraesCS5A01G357100 | chr3D | 95.833 | 120 | 5 | 0 | 3847 | 3966 | 614915026 | 614914907 | 1.460000e-45 | 195.0 |
29 | TraesCS5A01G357100 | chr3D | 87.143 | 140 | 12 | 4 | 5000 | 5138 | 8560690 | 8560556 | 2.480000e-33 | 154.0 |
30 | TraesCS5A01G357100 | chr3D | 90.000 | 50 | 1 | 1 | 3805 | 3850 | 267028100 | 267028051 | 1.540000e-05 | 62.1 |
31 | TraesCS5A01G357100 | chr2D | 95.556 | 135 | 6 | 0 | 4565 | 4699 | 308991236 | 308991370 | 3.120000e-52 | 217.0 |
32 | TraesCS5A01G357100 | chr2D | 95.522 | 134 | 6 | 0 | 4565 | 4698 | 561025615 | 561025748 | 1.120000e-51 | 215.0 |
33 | TraesCS5A01G357100 | chr2D | 96.581 | 117 | 4 | 0 | 3847 | 3963 | 629474433 | 629474317 | 1.460000e-45 | 195.0 |
34 | TraesCS5A01G357100 | chr2D | 92.126 | 127 | 10 | 0 | 3846 | 3972 | 233429767 | 233429641 | 4.090000e-41 | 180.0 |
35 | TraesCS5A01G357100 | chr2D | 90.196 | 51 | 1 | 1 | 3804 | 3850 | 61023709 | 61023759 | 4.290000e-06 | 63.9 |
36 | TraesCS5A01G357100 | chr3A | 95.522 | 134 | 5 | 1 | 4570 | 4703 | 507306853 | 507306985 | 4.030000e-51 | 213.0 |
37 | TraesCS5A01G357100 | chr7B | 96.032 | 126 | 4 | 1 | 3846 | 3971 | 453316645 | 453316521 | 2.430000e-48 | 204.0 |
38 | TraesCS5A01G357100 | chr7B | 91.837 | 147 | 10 | 2 | 4552 | 4698 | 710100069 | 710100213 | 2.430000e-48 | 204.0 |
39 | TraesCS5A01G357100 | chr7B | 96.581 | 117 | 4 | 0 | 3847 | 3963 | 42026824 | 42026940 | 1.460000e-45 | 195.0 |
40 | TraesCS5A01G357100 | chr7D | 95.041 | 121 | 6 | 0 | 3846 | 3966 | 565705247 | 565705127 | 1.890000e-44 | 191.0 |
41 | TraesCS5A01G357100 | chr7D | 87.500 | 56 | 3 | 3 | 3799 | 3850 | 498284614 | 498284559 | 1.540000e-05 | 62.1 |
42 | TraesCS5A01G357100 | chr4D | 95.000 | 120 | 6 | 0 | 3844 | 3963 | 392514705 | 392514824 | 6.790000e-44 | 189.0 |
43 | TraesCS5A01G357100 | chr4D | 85.714 | 147 | 19 | 2 | 4992 | 5138 | 214750287 | 214750431 | 2.480000e-33 | 154.0 |
44 | TraesCS5A01G357100 | chr4D | 82.313 | 147 | 17 | 4 | 4992 | 5138 | 64359545 | 64359682 | 9.040000e-23 | 119.0 |
45 | TraesCS5A01G357100 | chr4D | 90.196 | 51 | 1 | 3 | 3804 | 3850 | 379169417 | 379169367 | 4.290000e-06 | 63.9 |
46 | TraesCS5A01G357100 | chr4D | 100.000 | 32 | 0 | 0 | 3819 | 3850 | 356565220 | 356565189 | 5.560000e-05 | 60.2 |
47 | TraesCS5A01G357100 | chr4D | 88.889 | 45 | 5 | 0 | 3803 | 3847 | 87716435 | 87716479 | 7.190000e-04 | 56.5 |
48 | TraesCS5A01G357100 | chr1B | 94.958 | 119 | 6 | 0 | 3845 | 3963 | 10185774 | 10185892 | 2.440000e-43 | 187.0 |
49 | TraesCS5A01G357100 | chr1B | 90.741 | 54 | 1 | 3 | 3801 | 3850 | 608052477 | 608052530 | 9.230000e-08 | 69.4 |
50 | TraesCS5A01G357100 | chr1B | 90.566 | 53 | 1 | 3 | 3802 | 3850 | 133188854 | 133188906 | 3.320000e-07 | 67.6 |
51 | TraesCS5A01G357100 | chr1B | 90.385 | 52 | 1 | 3 | 3803 | 3850 | 88754781 | 88754730 | 1.190000e-06 | 65.8 |
52 | TraesCS5A01G357100 | chr4A | 82.877 | 146 | 23 | 2 | 4993 | 5138 | 384394649 | 384394506 | 4.180000e-26 | 130.0 |
53 | TraesCS5A01G357100 | chr6D | 79.861 | 144 | 25 | 4 | 4993 | 5135 | 104835290 | 104835430 | 9.100000e-18 | 102.0 |
54 | TraesCS5A01G357100 | chr6D | 90.196 | 51 | 1 | 3 | 3804 | 3850 | 458390135 | 458390185 | 4.290000e-06 | 63.9 |
55 | TraesCS5A01G357100 | chr6D | 90.000 | 50 | 1 | 1 | 3805 | 3850 | 168686084 | 168686133 | 1.540000e-05 | 62.1 |
56 | TraesCS5A01G357100 | chr6D | 85.455 | 55 | 6 | 2 | 3797 | 3850 | 319255304 | 319255357 | 7.190000e-04 | 56.5 |
57 | TraesCS5A01G357100 | chr6D | 96.875 | 32 | 1 | 0 | 3819 | 3850 | 263940912 | 263940943 | 3.000000e-03 | 54.7 |
58 | TraesCS5A01G357100 | chr3B | 95.652 | 46 | 2 | 0 | 3822 | 3867 | 71403771 | 71403726 | 1.980000e-09 | 75.0 |
59 | TraesCS5A01G357100 | chr3B | 87.037 | 54 | 7 | 0 | 5085 | 5138 | 503028166 | 503028113 | 1.540000e-05 | 62.1 |
60 | TraesCS5A01G357100 | chr1D | 88.889 | 63 | 3 | 1 | 3804 | 3862 | 240127277 | 240127339 | 1.980000e-09 | 75.0 |
61 | TraesCS5A01G357100 | chr1D | 90.196 | 51 | 1 | 3 | 3804 | 3850 | 141215335 | 141215285 | 4.290000e-06 | 63.9 |
62 | TraesCS5A01G357100 | chr1D | 89.362 | 47 | 1 | 1 | 3804 | 3846 | 59951847 | 59951893 | 7.190000e-04 | 56.5 |
63 | TraesCS5A01G357100 | chr4B | 90.566 | 53 | 1 | 3 | 3802 | 3850 | 142914485 | 142914433 | 3.320000e-07 | 67.6 |
64 | TraesCS5A01G357100 | chr4B | 90.196 | 51 | 1 | 1 | 3804 | 3850 | 492223542 | 492223492 | 4.290000e-06 | 63.9 |
65 | TraesCS5A01G357100 | chr6B | 87.931 | 58 | 2 | 2 | 3797 | 3850 | 203685514 | 203685570 | 4.290000e-06 | 63.9 |
66 | TraesCS5A01G357100 | chrUn | 100.000 | 32 | 0 | 0 | 3819 | 3850 | 105368174 | 105368205 | 5.560000e-05 | 60.2 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G357100 | chr5A | 559091546 | 559096683 | 5137 | True | 9489.0 | 9489 | 100.00000 | 1 | 5138 | 1 | chr5A.!!$R4 | 5137 |
1 | TraesCS5A01G357100 | chr5A | 89382642 | 89384990 | 2348 | False | 376.5 | 610 | 80.51900 | 804 | 2575 | 2 | chr5A.!!$F1 | 1771 |
2 | TraesCS5A01G357100 | chr5D | 443065777 | 443070553 | 4776 | True | 1836.7 | 6194 | 95.02825 | 4 | 4992 | 4 | chr5D.!!$R4 | 4988 |
3 | TraesCS5A01G357100 | chr5D | 95049651 | 95052007 | 2356 | False | 382.0 | 616 | 80.81150 | 802 | 2575 | 2 | chr5D.!!$F1 | 1773 |
4 | TraesCS5A01G357100 | chr5B | 539308640 | 539314047 | 5407 | True | 1426.8 | 5312 | 93.77620 | 4 | 4992 | 5 | chr5B.!!$R1 | 4988 |
5 | TraesCS5A01G357100 | chr5B | 78135160 | 78136073 | 913 | False | 577.0 | 577 | 78.37300 | 2652 | 3574 | 1 | chr5B.!!$F1 | 922 |
6 | TraesCS5A01G357100 | chr5B | 102064860 | 102065460 | 600 | False | 425.0 | 425 | 79.57900 | 2959 | 3574 | 1 | chr5B.!!$F2 | 615 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
475 | 1130 | 0.850784 | CCACCCGGGGGAGAAAATAT | 59.149 | 55.000 | 29.25 | 0.0 | 38.96 | 1.28 | F |
920 | 1588 | 1.896465 | CGGGGAGATCACCTCTATTCC | 59.104 | 57.143 | 7.52 | 0.0 | 41.66 | 3.01 | F |
1703 | 2416 | 1.613836 | ACTCGGTACTCGGACACTTT | 58.386 | 50.000 | 0.00 | 0.0 | 39.77 | 2.66 | F |
3109 | 4431 | 0.473755 | TGGGACAGAAAGAAGCTGCA | 59.526 | 50.000 | 1.02 | 0.0 | 36.86 | 4.41 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1449 | 2126 | 1.993956 | ACACAGTGGCAATTAAGGCA | 58.006 | 45.0 | 5.31 | 0.0 | 42.25 | 4.75 | R |
2393 | 3499 | 2.476854 | GCGTTCAATGCTAAGCTTCAGG | 60.477 | 50.0 | 0.00 | 0.0 | 0.00 | 3.86 | R |
3606 | 4928 | 0.409876 | TAGACCACTGTGCTCTCCCT | 59.590 | 55.0 | 8.81 | 0.0 | 0.00 | 4.20 | R |
4681 | 6108 | 0.115745 | AGGTACTCCTTCCGTCCCAA | 59.884 | 55.0 | 0.00 | 0.0 | 42.12 | 4.12 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
87 | 89 | 9.438163 | AGAAATGTCACCCAATTTTATATGGAT | 57.562 | 29.630 | 0.00 | 0.00 | 39.12 | 3.41 |
180 | 182 | 5.417266 | TCATAAAGGCATCCGAAAATCACAA | 59.583 | 36.000 | 0.00 | 0.00 | 0.00 | 3.33 |
313 | 315 | 5.772672 | AGCAAATTCACCAAAGTACACCATA | 59.227 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
475 | 1130 | 0.850784 | CCACCCGGGGGAGAAAATAT | 59.149 | 55.000 | 29.25 | 0.00 | 38.96 | 1.28 |
651 | 1307 | 6.178507 | GTCGAGTTGTCATTGAATCGTAATG | 58.821 | 40.000 | 9.97 | 0.00 | 36.98 | 1.90 |
819 | 1487 | 3.674753 | GCGCTGTTATGCTTGATTTTGTT | 59.325 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
824 | 1492 | 6.018832 | GCTGTTATGCTTGATTTTGTTTGTGT | 60.019 | 34.615 | 0.00 | 0.00 | 0.00 | 3.72 |
920 | 1588 | 1.896465 | CGGGGAGATCACCTCTATTCC | 59.104 | 57.143 | 7.52 | 0.00 | 41.66 | 3.01 |
991 | 1659 | 9.326413 | CCTACTTCTTTTAGTTTCTCTTCAACA | 57.674 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
1000 | 1672 | 4.105486 | GTTTCTCTTCAACAGTTTGTGGC | 58.895 | 43.478 | 0.00 | 0.00 | 34.02 | 5.01 |
1053 | 1726 | 9.736023 | AAAGTTCTGTTTTCTACACATTTCATC | 57.264 | 29.630 | 0.00 | 0.00 | 32.10 | 2.92 |
1183 | 1859 | 5.721000 | TCCATAAATGCCAAATTTGAGGTCT | 59.279 | 36.000 | 19.86 | 3.85 | 0.00 | 3.85 |
1184 | 1860 | 6.044682 | CCATAAATGCCAAATTTGAGGTCTC | 58.955 | 40.000 | 19.86 | 2.42 | 0.00 | 3.36 |
1185 | 1861 | 6.127253 | CCATAAATGCCAAATTTGAGGTCTCT | 60.127 | 38.462 | 19.86 | 0.85 | 0.00 | 3.10 |
1449 | 2126 | 5.253096 | AGTCATACTTGGTTGGGTTCCTAAT | 59.747 | 40.000 | 0.00 | 0.00 | 0.00 | 1.73 |
1666 | 2376 | 3.951680 | GGACCAGGAACAAAAGTTGAAGA | 59.048 | 43.478 | 0.00 | 0.00 | 0.00 | 2.87 |
1697 | 2410 | 2.019249 | CCACAATACTCGGTACTCGGA | 58.981 | 52.381 | 0.00 | 0.00 | 39.77 | 4.55 |
1703 | 2416 | 1.613836 | ACTCGGTACTCGGACACTTT | 58.386 | 50.000 | 0.00 | 0.00 | 39.77 | 2.66 |
1894 | 2607 | 7.500992 | TCCAGAAACAGGTAGATTATGACATC | 58.499 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
1895 | 2608 | 6.422100 | CCAGAAACAGGTAGATTATGACATCG | 59.578 | 42.308 | 0.00 | 0.00 | 0.00 | 3.84 |
1918 | 2631 | 5.123227 | GCCCATACTATGTGCTTTCAGTAA | 58.877 | 41.667 | 0.00 | 0.00 | 30.62 | 2.24 |
2169 | 2894 | 1.614711 | CAGCAAATGGGGCCTCCTA | 59.385 | 57.895 | 0.00 | 0.00 | 36.20 | 2.94 |
2345 | 3451 | 3.181329 | TGTGGTGACAGTATGGGAGAAT | 58.819 | 45.455 | 0.00 | 0.00 | 44.46 | 2.40 |
2920 | 4236 | 1.281867 | TCAGAATGGCCGACTTCCAAT | 59.718 | 47.619 | 0.00 | 0.00 | 37.13 | 3.16 |
2921 | 4237 | 1.402968 | CAGAATGGCCGACTTCCAATG | 59.597 | 52.381 | 0.00 | 0.00 | 37.13 | 2.82 |
3007 | 4329 | 4.545678 | TCCCCATTTTATGATTGTCCCAG | 58.454 | 43.478 | 0.00 | 0.00 | 0.00 | 4.45 |
3109 | 4431 | 0.473755 | TGGGACAGAAAGAAGCTGCA | 59.526 | 50.000 | 1.02 | 0.00 | 36.86 | 4.41 |
3157 | 4479 | 3.131396 | AGAAATCACAAGTGTCACCGAC | 58.869 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
3202 | 4524 | 2.342650 | CGCCTGGTTCCATGGGTTG | 61.343 | 63.158 | 13.02 | 0.00 | 0.00 | 3.77 |
3447 | 4769 | 2.891941 | GATGGATGCCCGCCAGTCAA | 62.892 | 60.000 | 0.00 | 0.00 | 39.11 | 3.18 |
3494 | 4816 | 3.670105 | TGGTCCTTCCAATGAAGCC | 57.330 | 52.632 | 0.00 | 0.00 | 45.53 | 4.35 |
3501 | 4823 | 3.075283 | TCCTTCCAATGAAGCCCTTGTTA | 59.925 | 43.478 | 0.00 | 0.00 | 45.53 | 2.41 |
3503 | 4825 | 5.044476 | TCCTTCCAATGAAGCCCTTGTTATA | 60.044 | 40.000 | 0.00 | 0.00 | 45.53 | 0.98 |
3606 | 4928 | 2.334946 | GCTGGCCTCGCAACATCAA | 61.335 | 57.895 | 3.32 | 0.00 | 0.00 | 2.57 |
3644 | 4966 | 8.870879 | GTGGTCTATAGTAGTGAAATGAACAAC | 58.129 | 37.037 | 0.00 | 0.00 | 0.00 | 3.32 |
3645 | 4967 | 8.590204 | TGGTCTATAGTAGTGAAATGAACAACA | 58.410 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
3670 | 4992 | 2.890808 | ACGACTCTGAAGCTTTGACA | 57.109 | 45.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3683 | 5005 | 2.159393 | GCTTTGACACTGCAACTGTTCA | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
3698 | 5020 | 5.722021 | ACTGTTCAAAACCAAAGACTGTT | 57.278 | 34.783 | 0.00 | 0.00 | 0.00 | 3.16 |
3703 | 5028 | 5.730296 | TCAAAACCAAAGACTGTTTCCAA | 57.270 | 34.783 | 0.00 | 0.00 | 33.76 | 3.53 |
3722 | 5047 | 6.052405 | TCCAAAAAGCCAATTCAAGCATAT | 57.948 | 33.333 | 0.00 | 0.00 | 0.00 | 1.78 |
3727 | 5052 | 2.545526 | AGCCAATTCAAGCATATCGACG | 59.454 | 45.455 | 0.00 | 0.00 | 0.00 | 5.12 |
3845 | 5170 | 6.223138 | TGTCGCTGATTTAGTACAAAGTTG | 57.777 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
3846 | 5171 | 5.756347 | TGTCGCTGATTTAGTACAAAGTTGT | 59.244 | 36.000 | 1.75 | 1.75 | 44.86 | 3.32 |
3847 | 5172 | 6.924612 | TGTCGCTGATTTAGTACAAAGTTGTA | 59.075 | 34.615 | 0.00 | 0.00 | 42.35 | 2.41 |
3856 | 5181 | 2.833631 | ACAAAGTTGTACTCCCTCCG | 57.166 | 50.000 | 0.00 | 0.00 | 40.16 | 4.63 |
3857 | 5182 | 2.044758 | ACAAAGTTGTACTCCCTCCGT | 58.955 | 47.619 | 0.00 | 0.00 | 40.16 | 4.69 |
3858 | 5183 | 2.436911 | ACAAAGTTGTACTCCCTCCGTT | 59.563 | 45.455 | 0.00 | 0.00 | 40.16 | 4.44 |
3859 | 5184 | 3.064931 | CAAAGTTGTACTCCCTCCGTTC | 58.935 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
3860 | 5185 | 1.264295 | AGTTGTACTCCCTCCGTTCC | 58.736 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
3861 | 5186 | 0.971386 | GTTGTACTCCCTCCGTTCCA | 59.029 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3862 | 5187 | 1.345415 | GTTGTACTCCCTCCGTTCCAA | 59.655 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
3863 | 5188 | 1.719529 | TGTACTCCCTCCGTTCCAAA | 58.280 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
3864 | 5189 | 2.262637 | TGTACTCCCTCCGTTCCAAAT | 58.737 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
3865 | 5190 | 2.640826 | TGTACTCCCTCCGTTCCAAATT | 59.359 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
3866 | 5191 | 3.839490 | TGTACTCCCTCCGTTCCAAATTA | 59.161 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
3867 | 5192 | 3.345508 | ACTCCCTCCGTTCCAAATTAC | 57.654 | 47.619 | 0.00 | 0.00 | 0.00 | 1.89 |
3868 | 5193 | 2.910977 | ACTCCCTCCGTTCCAAATTACT | 59.089 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
3869 | 5194 | 3.329814 | ACTCCCTCCGTTCCAAATTACTT | 59.670 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
3870 | 5195 | 3.681593 | TCCCTCCGTTCCAAATTACTTG | 58.318 | 45.455 | 0.00 | 0.00 | 34.52 | 3.16 |
3871 | 5196 | 3.073356 | TCCCTCCGTTCCAAATTACTTGT | 59.927 | 43.478 | 0.00 | 0.00 | 32.65 | 3.16 |
3872 | 5197 | 3.439129 | CCCTCCGTTCCAAATTACTTGTC | 59.561 | 47.826 | 0.00 | 0.00 | 32.65 | 3.18 |
3873 | 5198 | 4.324267 | CCTCCGTTCCAAATTACTTGTCT | 58.676 | 43.478 | 0.00 | 0.00 | 32.65 | 3.41 |
3874 | 5199 | 4.392138 | CCTCCGTTCCAAATTACTTGTCTC | 59.608 | 45.833 | 0.00 | 0.00 | 32.65 | 3.36 |
3875 | 5200 | 4.963373 | TCCGTTCCAAATTACTTGTCTCA | 58.037 | 39.130 | 0.00 | 0.00 | 32.65 | 3.27 |
3876 | 5201 | 5.369833 | TCCGTTCCAAATTACTTGTCTCAA | 58.630 | 37.500 | 0.00 | 0.00 | 32.65 | 3.02 |
3877 | 5202 | 5.823570 | TCCGTTCCAAATTACTTGTCTCAAA | 59.176 | 36.000 | 0.00 | 0.00 | 32.65 | 2.69 |
3878 | 5203 | 6.319152 | TCCGTTCCAAATTACTTGTCTCAAAA | 59.681 | 34.615 | 0.00 | 0.00 | 32.65 | 2.44 |
3879 | 5204 | 6.636850 | CCGTTCCAAATTACTTGTCTCAAAAG | 59.363 | 38.462 | 0.00 | 0.00 | 32.65 | 2.27 |
3880 | 5205 | 7.193595 | CGTTCCAAATTACTTGTCTCAAAAGT | 58.806 | 34.615 | 0.00 | 0.00 | 40.82 | 2.66 |
3881 | 5206 | 7.165812 | CGTTCCAAATTACTTGTCTCAAAAGTG | 59.834 | 37.037 | 0.00 | 0.00 | 38.32 | 3.16 |
3882 | 5207 | 7.038154 | TCCAAATTACTTGTCTCAAAAGTGG | 57.962 | 36.000 | 0.00 | 0.00 | 38.32 | 4.00 |
3883 | 5208 | 6.831353 | TCCAAATTACTTGTCTCAAAAGTGGA | 59.169 | 34.615 | 0.00 | 0.00 | 38.32 | 4.02 |
3884 | 5209 | 7.505585 | TCCAAATTACTTGTCTCAAAAGTGGAT | 59.494 | 33.333 | 0.00 | 0.00 | 38.32 | 3.41 |
3885 | 5210 | 8.792633 | CCAAATTACTTGTCTCAAAAGTGGATA | 58.207 | 33.333 | 0.00 | 0.00 | 38.32 | 2.59 |
3892 | 5217 | 8.143835 | ACTTGTCTCAAAAGTGGATAAAAATGG | 58.856 | 33.333 | 0.00 | 0.00 | 36.52 | 3.16 |
3893 | 5218 | 7.831691 | TGTCTCAAAAGTGGATAAAAATGGA | 57.168 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3894 | 5219 | 8.421249 | TGTCTCAAAAGTGGATAAAAATGGAT | 57.579 | 30.769 | 0.00 | 0.00 | 0.00 | 3.41 |
3895 | 5220 | 8.306038 | TGTCTCAAAAGTGGATAAAAATGGATG | 58.694 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
3896 | 5221 | 8.306761 | GTCTCAAAAGTGGATAAAAATGGATGT | 58.693 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
3897 | 5222 | 9.527157 | TCTCAAAAGTGGATAAAAATGGATGTA | 57.473 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
3927 | 5252 | 9.962783 | ACAACTAAAATACGTCTAGATACATCC | 57.037 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
3928 | 5253 | 9.961265 | CAACTAAAATACGTCTAGATACATCCA | 57.039 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
3934 | 5259 | 9.698309 | AAATACGTCTAGATACATCCATTTCTG | 57.302 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
3935 | 5260 | 6.716934 | ACGTCTAGATACATCCATTTCTGT | 57.283 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
3936 | 5261 | 6.507900 | ACGTCTAGATACATCCATTTCTGTG | 58.492 | 40.000 | 0.00 | 0.00 | 0.00 | 3.66 |
3937 | 5262 | 6.321435 | ACGTCTAGATACATCCATTTCTGTGA | 59.679 | 38.462 | 0.00 | 0.00 | 0.00 | 3.58 |
3938 | 5263 | 6.638873 | CGTCTAGATACATCCATTTCTGTGAC | 59.361 | 42.308 | 0.00 | 0.00 | 0.00 | 3.67 |
3939 | 5264 | 7.492524 | GTCTAGATACATCCATTTCTGTGACA | 58.507 | 38.462 | 0.00 | 0.00 | 0.00 | 3.58 |
3940 | 5265 | 7.981789 | GTCTAGATACATCCATTTCTGTGACAA | 59.018 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
3941 | 5266 | 8.708378 | TCTAGATACATCCATTTCTGTGACAAT | 58.292 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
3942 | 5267 | 9.334947 | CTAGATACATCCATTTCTGTGACAATT | 57.665 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
3944 | 5269 | 9.685276 | AGATACATCCATTTCTGTGACAATTAA | 57.315 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
3948 | 5273 | 8.253113 | ACATCCATTTCTGTGACAATTAATTCC | 58.747 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
3949 | 5274 | 7.169158 | TCCATTTCTGTGACAATTAATTCCC | 57.831 | 36.000 | 0.00 | 0.00 | 0.00 | 3.97 |
3950 | 5275 | 6.723515 | TCCATTTCTGTGACAATTAATTCCCA | 59.276 | 34.615 | 0.00 | 0.00 | 0.00 | 4.37 |
3951 | 5276 | 7.234371 | TCCATTTCTGTGACAATTAATTCCCAA | 59.766 | 33.333 | 0.00 | 0.00 | 0.00 | 4.12 |
3952 | 5277 | 7.331687 | CCATTTCTGTGACAATTAATTCCCAAC | 59.668 | 37.037 | 0.00 | 0.00 | 0.00 | 3.77 |
3953 | 5278 | 5.621197 | TCTGTGACAATTAATTCCCAACG | 57.379 | 39.130 | 0.00 | 0.00 | 0.00 | 4.10 |
3954 | 5279 | 4.457603 | TCTGTGACAATTAATTCCCAACGG | 59.542 | 41.667 | 0.00 | 0.84 | 0.00 | 4.44 |
3955 | 5280 | 4.399219 | TGTGACAATTAATTCCCAACGGA | 58.601 | 39.130 | 0.00 | 0.00 | 35.88 | 4.69 |
3956 | 5281 | 4.457603 | TGTGACAATTAATTCCCAACGGAG | 59.542 | 41.667 | 0.00 | 0.00 | 40.10 | 4.63 |
3957 | 5282 | 4.013728 | TGACAATTAATTCCCAACGGAGG | 58.986 | 43.478 | 0.00 | 0.00 | 40.10 | 4.30 |
3987 | 5313 | 8.154649 | ACTAAATCAGCGACAATTAATAAGGG | 57.845 | 34.615 | 0.00 | 0.00 | 0.00 | 3.95 |
3988 | 5314 | 5.438761 | AATCAGCGACAATTAATAAGGGC | 57.561 | 39.130 | 0.00 | 0.00 | 0.00 | 5.19 |
4053 | 5379 | 3.963428 | AGTTCTCAACTCTATTGCGGT | 57.037 | 42.857 | 0.00 | 0.00 | 37.02 | 5.68 |
4068 | 5394 | 0.992802 | GCGGTCTCTAGAAACGCAAG | 59.007 | 55.000 | 23.44 | 4.53 | 45.67 | 4.01 |
4161 | 5487 | 6.207810 | TGTTTTAATATCACCGCCTTTGAGTT | 59.792 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
4165 | 5491 | 0.034896 | TCACCGCCTTTGAGTTCTCC | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
4180 | 5506 | 3.265995 | AGTTCTCCGGTGGTTCCATTTAT | 59.734 | 43.478 | 0.00 | 0.00 | 35.57 | 1.40 |
4206 | 5532 | 4.777781 | CATGCTGGCATGTTGACG | 57.222 | 55.556 | 22.78 | 1.45 | 46.20 | 4.35 |
4219 | 5545 | 0.796312 | GTTGACGGCGTGATGTGATT | 59.204 | 50.000 | 21.19 | 0.00 | 0.00 | 2.57 |
4363 | 5689 | 7.332557 | AGGTGATTGAACCATACAACGTATTA | 58.667 | 34.615 | 0.00 | 0.00 | 43.20 | 0.98 |
4437 | 5794 | 9.928236 | GCAATTTTGAGATAGAAGAAGTATGTC | 57.072 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
4570 | 5997 | 2.372074 | GGTCCGGCCCTATCCAACA | 61.372 | 63.158 | 0.00 | 0.00 | 0.00 | 3.33 |
4571 | 5998 | 1.705997 | GGTCCGGCCCTATCCAACAT | 61.706 | 60.000 | 0.00 | 0.00 | 0.00 | 2.71 |
4572 | 5999 | 1.053424 | GTCCGGCCCTATCCAACATA | 58.947 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
4573 | 6000 | 1.053424 | TCCGGCCCTATCCAACATAC | 58.947 | 55.000 | 0.00 | 0.00 | 0.00 | 2.39 |
4574 | 6001 | 1.056660 | CCGGCCCTATCCAACATACT | 58.943 | 55.000 | 0.00 | 0.00 | 0.00 | 2.12 |
4575 | 6002 | 1.002087 | CCGGCCCTATCCAACATACTC | 59.998 | 57.143 | 0.00 | 0.00 | 0.00 | 2.59 |
4576 | 6003 | 1.002087 | CGGCCCTATCCAACATACTCC | 59.998 | 57.143 | 0.00 | 0.00 | 0.00 | 3.85 |
4577 | 6004 | 1.351350 | GGCCCTATCCAACATACTCCC | 59.649 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
4578 | 6005 | 2.339769 | GCCCTATCCAACATACTCCCT | 58.660 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
4579 | 6006 | 2.711547 | GCCCTATCCAACATACTCCCTT | 59.288 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
4580 | 6007 | 3.244596 | GCCCTATCCAACATACTCCCTTC | 60.245 | 52.174 | 0.00 | 0.00 | 0.00 | 3.46 |
4581 | 6008 | 3.006967 | CCCTATCCAACATACTCCCTTCG | 59.993 | 52.174 | 0.00 | 0.00 | 0.00 | 3.79 |
4582 | 6009 | 3.641906 | CCTATCCAACATACTCCCTTCGT | 59.358 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
4583 | 6010 | 3.821421 | ATCCAACATACTCCCTTCGTC | 57.179 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
4584 | 6011 | 1.829222 | TCCAACATACTCCCTTCGTCC | 59.171 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
4585 | 6012 | 1.134491 | CCAACATACTCCCTTCGTCCC | 60.134 | 57.143 | 0.00 | 0.00 | 0.00 | 4.46 |
4586 | 6013 | 1.553248 | CAACATACTCCCTTCGTCCCA | 59.447 | 52.381 | 0.00 | 0.00 | 0.00 | 4.37 |
4587 | 6014 | 1.946984 | ACATACTCCCTTCGTCCCAA | 58.053 | 50.000 | 0.00 | 0.00 | 0.00 | 4.12 |
4588 | 6015 | 2.262637 | ACATACTCCCTTCGTCCCAAA | 58.737 | 47.619 | 0.00 | 0.00 | 0.00 | 3.28 |
4589 | 6016 | 2.640826 | ACATACTCCCTTCGTCCCAAAA | 59.359 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
4590 | 6017 | 3.265995 | ACATACTCCCTTCGTCCCAAAAT | 59.734 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
4591 | 6018 | 2.971901 | ACTCCCTTCGTCCCAAAATT | 57.028 | 45.000 | 0.00 | 0.00 | 0.00 | 1.82 |
4592 | 6019 | 2.791655 | ACTCCCTTCGTCCCAAAATTC | 58.208 | 47.619 | 0.00 | 0.00 | 0.00 | 2.17 |
4593 | 6020 | 2.375509 | ACTCCCTTCGTCCCAAAATTCT | 59.624 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
4594 | 6021 | 3.181433 | ACTCCCTTCGTCCCAAAATTCTT | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
4595 | 6022 | 3.153919 | TCCCTTCGTCCCAAAATTCTTG | 58.846 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
4596 | 6023 | 2.890945 | CCCTTCGTCCCAAAATTCTTGT | 59.109 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
4597 | 6024 | 3.057526 | CCCTTCGTCCCAAAATTCTTGTC | 60.058 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
4598 | 6025 | 3.821033 | CCTTCGTCCCAAAATTCTTGTCT | 59.179 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
4599 | 6026 | 4.278419 | CCTTCGTCCCAAAATTCTTGTCTT | 59.722 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
4600 | 6027 | 5.472137 | CCTTCGTCCCAAAATTCTTGTCTTA | 59.528 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
4601 | 6028 | 6.348540 | CCTTCGTCCCAAAATTCTTGTCTTAG | 60.349 | 42.308 | 0.00 | 0.00 | 0.00 | 2.18 |
4602 | 6029 | 5.860611 | TCGTCCCAAAATTCTTGTCTTAGA | 58.139 | 37.500 | 0.00 | 0.00 | 0.00 | 2.10 |
4603 | 6030 | 6.472887 | TCGTCCCAAAATTCTTGTCTTAGAT | 58.527 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
4604 | 6031 | 6.940298 | TCGTCCCAAAATTCTTGTCTTAGATT | 59.060 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
4605 | 6032 | 7.447238 | TCGTCCCAAAATTCTTGTCTTAGATTT | 59.553 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
4606 | 6033 | 7.538678 | CGTCCCAAAATTCTTGTCTTAGATTTG | 59.461 | 37.037 | 0.00 | 0.00 | 29.84 | 2.32 |
4607 | 6034 | 8.360390 | GTCCCAAAATTCTTGTCTTAGATTTGT | 58.640 | 33.333 | 0.00 | 0.00 | 28.79 | 2.83 |
4608 | 6035 | 8.576442 | TCCCAAAATTCTTGTCTTAGATTTGTC | 58.424 | 33.333 | 0.00 | 0.00 | 28.79 | 3.18 |
4609 | 6036 | 8.579863 | CCCAAAATTCTTGTCTTAGATTTGTCT | 58.420 | 33.333 | 0.00 | 0.00 | 28.79 | 3.41 |
4617 | 6044 | 9.582431 | TCTTGTCTTAGATTTGTCTAAATACGG | 57.418 | 33.333 | 0.26 | 0.99 | 36.66 | 4.02 |
4618 | 6045 | 9.582431 | CTTGTCTTAGATTTGTCTAAATACGGA | 57.418 | 33.333 | 0.26 | 0.00 | 36.66 | 4.69 |
4620 | 6047 | 9.529325 | TGTCTTAGATTTGTCTAAATACGGATG | 57.471 | 33.333 | 0.26 | 0.00 | 36.66 | 3.51 |
4621 | 6048 | 9.530633 | GTCTTAGATTTGTCTAAATACGGATGT | 57.469 | 33.333 | 0.26 | 0.00 | 36.66 | 3.06 |
4628 | 6055 | 9.832445 | ATTTGTCTAAATACGGATGTATCAAGT | 57.168 | 29.630 | 0.00 | 0.00 | 40.42 | 3.16 |
4629 | 6056 | 8.867112 | TTGTCTAAATACGGATGTATCAAGTC | 57.133 | 34.615 | 0.00 | 0.00 | 40.42 | 3.01 |
4630 | 6057 | 8.002984 | TGTCTAAATACGGATGTATCAAGTCA | 57.997 | 34.615 | 0.00 | 0.00 | 40.42 | 3.41 |
4631 | 6058 | 7.919091 | TGTCTAAATACGGATGTATCAAGTCAC | 59.081 | 37.037 | 0.00 | 0.00 | 40.42 | 3.67 |
4632 | 6059 | 7.113124 | GTCTAAATACGGATGTATCAAGTCACG | 59.887 | 40.741 | 0.00 | 0.00 | 40.42 | 4.35 |
4633 | 6060 | 4.913335 | ATACGGATGTATCAAGTCACGT | 57.087 | 40.909 | 0.00 | 0.00 | 36.56 | 4.49 |
4634 | 6061 | 3.587797 | ACGGATGTATCAAGTCACGTT | 57.412 | 42.857 | 0.00 | 0.00 | 0.00 | 3.99 |
4635 | 6062 | 3.921677 | ACGGATGTATCAAGTCACGTTT | 58.078 | 40.909 | 0.00 | 0.00 | 0.00 | 3.60 |
4636 | 6063 | 4.312443 | ACGGATGTATCAAGTCACGTTTT | 58.688 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
4637 | 6064 | 5.472148 | ACGGATGTATCAAGTCACGTTTTA | 58.528 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
4638 | 6065 | 5.575606 | ACGGATGTATCAAGTCACGTTTTAG | 59.424 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
4639 | 6066 | 5.575606 | CGGATGTATCAAGTCACGTTTTAGT | 59.424 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4640 | 6067 | 6.748658 | CGGATGTATCAAGTCACGTTTTAGTA | 59.251 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
4641 | 6068 | 7.434307 | CGGATGTATCAAGTCACGTTTTAGTAT | 59.566 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
4642 | 6069 | 9.095065 | GGATGTATCAAGTCACGTTTTAGTATT | 57.905 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
4652 | 6079 | 9.962783 | AGTCACGTTTTAGTATTAGATACATCC | 57.037 | 33.333 | 0.00 | 0.00 | 38.21 | 3.51 |
4653 | 6080 | 8.899776 | GTCACGTTTTAGTATTAGATACATCCG | 58.100 | 37.037 | 0.00 | 0.00 | 38.21 | 4.18 |
4654 | 6081 | 8.623903 | TCACGTTTTAGTATTAGATACATCCGT | 58.376 | 33.333 | 0.00 | 0.00 | 38.21 | 4.69 |
4655 | 6082 | 9.882996 | CACGTTTTAGTATTAGATACATCCGTA | 57.117 | 33.333 | 0.00 | 0.00 | 38.21 | 4.02 |
4673 | 6100 | 9.530633 | ACATCCGTATCTAGACAAATTTAAGAC | 57.469 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
4674 | 6101 | 9.529325 | CATCCGTATCTAGACAAATTTAAGACA | 57.471 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
4676 | 6103 | 9.932207 | TCCGTATCTAGACAAATTTAAGACAAA | 57.068 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
4688 | 6115 | 9.432077 | CAAATTTAAGACAAAAATTTTGGGACG | 57.568 | 29.630 | 20.79 | 0.00 | 41.45 | 4.79 |
4689 | 6116 | 7.722795 | ATTTAAGACAAAAATTTTGGGACGG | 57.277 | 32.000 | 20.79 | 0.00 | 0.00 | 4.79 |
4690 | 6117 | 6.466885 | TTAAGACAAAAATTTTGGGACGGA | 57.533 | 33.333 | 20.79 | 1.94 | 0.00 | 4.69 |
4691 | 6118 | 5.346181 | AAGACAAAAATTTTGGGACGGAA | 57.654 | 34.783 | 20.79 | 0.00 | 0.00 | 4.30 |
4692 | 6119 | 4.944048 | AGACAAAAATTTTGGGACGGAAG | 58.056 | 39.130 | 20.79 | 0.00 | 0.00 | 3.46 |
4693 | 6120 | 4.055360 | GACAAAAATTTTGGGACGGAAGG | 58.945 | 43.478 | 20.79 | 0.00 | 0.00 | 3.46 |
4694 | 6121 | 3.707102 | ACAAAAATTTTGGGACGGAAGGA | 59.293 | 39.130 | 20.79 | 0.00 | 0.00 | 3.36 |
4695 | 6122 | 4.202212 | ACAAAAATTTTGGGACGGAAGGAG | 60.202 | 41.667 | 20.79 | 0.00 | 0.00 | 3.69 |
4696 | 6123 | 2.971901 | AATTTTGGGACGGAAGGAGT | 57.028 | 45.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4716 | 6143 | 8.946797 | AGGAGTACCTTACAAACTAGACTAAA | 57.053 | 34.615 | 0.00 | 0.00 | 45.36 | 1.85 |
4728 | 6155 | 6.686130 | AACTAGACTAAACGAAACACGATG | 57.314 | 37.500 | 0.00 | 0.00 | 45.77 | 3.84 |
4801 | 6230 | 1.815003 | CCATCAGAGTTTTGGTGAGCC | 59.185 | 52.381 | 0.00 | 0.00 | 30.58 | 4.70 |
4806 | 6235 | 3.381272 | TCAGAGTTTTGGTGAGCCTTTTG | 59.619 | 43.478 | 0.00 | 0.00 | 35.27 | 2.44 |
4813 | 6242 | 0.108945 | GGTGAGCCTTTTGCATCTGC | 60.109 | 55.000 | 0.00 | 0.00 | 44.83 | 4.26 |
4824 | 6253 | 5.484173 | TTTTGCATCTGCCTAGAATTACG | 57.516 | 39.130 | 0.00 | 0.00 | 41.18 | 3.18 |
4878 | 6307 | 6.238211 | GGATGACCAAGTTAACAGATTCATCG | 60.238 | 42.308 | 21.56 | 0.00 | 39.24 | 3.84 |
4921 | 6350 | 4.515191 | GCTTCAACTGTTCATGGTTAGACA | 59.485 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
4922 | 6351 | 5.182001 | GCTTCAACTGTTCATGGTTAGACAT | 59.818 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
4923 | 6352 | 6.294176 | GCTTCAACTGTTCATGGTTAGACATT | 60.294 | 38.462 | 0.00 | 0.00 | 0.00 | 2.71 |
4924 | 6353 | 7.094805 | GCTTCAACTGTTCATGGTTAGACATTA | 60.095 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
4925 | 6354 | 7.905604 | TCAACTGTTCATGGTTAGACATTAG | 57.094 | 36.000 | 0.00 | 0.00 | 0.00 | 1.73 |
4926 | 6355 | 7.676004 | TCAACTGTTCATGGTTAGACATTAGA | 58.324 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
4927 | 6356 | 7.602644 | TCAACTGTTCATGGTTAGACATTAGAC | 59.397 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
4945 | 6374 | 1.154016 | CTTGTGCTCTGCATGCAGC | 60.154 | 57.895 | 37.48 | 29.32 | 41.91 | 5.25 |
4992 | 6426 | 9.996554 | TCAACTCTAATGACATGACTCTTAAAA | 57.003 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
4995 | 6429 | 9.442047 | ACTCTAATGACATGACTCTTAAAAAGG | 57.558 | 33.333 | 0.00 | 0.00 | 0.00 | 3.11 |
4996 | 6430 | 9.658799 | CTCTAATGACATGACTCTTAAAAAGGA | 57.341 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
4997 | 6431 | 9.658799 | TCTAATGACATGACTCTTAAAAAGGAG | 57.341 | 33.333 | 0.00 | 0.00 | 35.86 | 3.69 |
4998 | 6432 | 6.749923 | ATGACATGACTCTTAAAAAGGAGC | 57.250 | 37.500 | 0.00 | 0.00 | 33.29 | 4.70 |
4999 | 6433 | 5.869579 | TGACATGACTCTTAAAAAGGAGCT | 58.130 | 37.500 | 0.00 | 0.00 | 33.29 | 4.09 |
5000 | 6434 | 5.934625 | TGACATGACTCTTAAAAAGGAGCTC | 59.065 | 40.000 | 4.71 | 4.71 | 33.29 | 4.09 |
5001 | 6435 | 4.932200 | ACATGACTCTTAAAAAGGAGCTCG | 59.068 | 41.667 | 7.83 | 0.00 | 33.29 | 5.03 |
5002 | 6436 | 3.926616 | TGACTCTTAAAAAGGAGCTCGG | 58.073 | 45.455 | 7.83 | 0.00 | 33.29 | 4.63 |
5003 | 6437 | 3.263261 | GACTCTTAAAAAGGAGCTCGGG | 58.737 | 50.000 | 7.83 | 0.00 | 33.29 | 5.14 |
5004 | 6438 | 2.010497 | CTCTTAAAAAGGAGCTCGGGC | 58.990 | 52.381 | 7.83 | 0.00 | 39.06 | 6.13 |
5005 | 6439 | 1.095600 | CTTAAAAAGGAGCTCGGGCC | 58.904 | 55.000 | 2.00 | 0.00 | 39.73 | 5.80 |
5006 | 6440 | 0.402504 | TTAAAAAGGAGCTCGGGCCA | 59.597 | 50.000 | 2.00 | 0.00 | 39.73 | 5.36 |
5007 | 6441 | 0.322187 | TAAAAAGGAGCTCGGGCCAC | 60.322 | 55.000 | 2.00 | 0.00 | 39.73 | 5.01 |
5008 | 6442 | 2.351924 | AAAAAGGAGCTCGGGCCACA | 62.352 | 55.000 | 2.00 | 0.00 | 39.73 | 4.17 |
5009 | 6443 | 3.553095 | AAAGGAGCTCGGGCCACAC | 62.553 | 63.158 | 2.00 | 0.00 | 39.73 | 3.82 |
5012 | 6446 | 4.008933 | GAGCTCGGGCCACACACT | 62.009 | 66.667 | 2.00 | 0.00 | 39.73 | 3.55 |
5013 | 6447 | 3.941657 | GAGCTCGGGCCACACACTC | 62.942 | 68.421 | 2.00 | 0.07 | 39.73 | 3.51 |
5014 | 6448 | 4.008933 | GCTCGGGCCACACACTCT | 62.009 | 66.667 | 4.39 | 0.00 | 0.00 | 3.24 |
5015 | 6449 | 2.743718 | CTCGGGCCACACACTCTT | 59.256 | 61.111 | 4.39 | 0.00 | 0.00 | 2.85 |
5016 | 6450 | 1.374758 | CTCGGGCCACACACTCTTC | 60.375 | 63.158 | 4.39 | 0.00 | 0.00 | 2.87 |
5017 | 6451 | 1.821061 | CTCGGGCCACACACTCTTCT | 61.821 | 60.000 | 4.39 | 0.00 | 0.00 | 2.85 |
5018 | 6452 | 0.541063 | TCGGGCCACACACTCTTCTA | 60.541 | 55.000 | 4.39 | 0.00 | 0.00 | 2.10 |
5019 | 6453 | 0.320374 | CGGGCCACACACTCTTCTAA | 59.680 | 55.000 | 4.39 | 0.00 | 0.00 | 2.10 |
5020 | 6454 | 1.809684 | GGGCCACACACTCTTCTAAC | 58.190 | 55.000 | 4.39 | 0.00 | 0.00 | 2.34 |
5021 | 6455 | 1.610886 | GGGCCACACACTCTTCTAACC | 60.611 | 57.143 | 4.39 | 0.00 | 0.00 | 2.85 |
5022 | 6456 | 1.071699 | GGCCACACACTCTTCTAACCA | 59.928 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
5023 | 6457 | 2.290323 | GGCCACACACTCTTCTAACCAT | 60.290 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
5024 | 6458 | 3.003480 | GCCACACACTCTTCTAACCATC | 58.997 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5025 | 6459 | 3.600388 | CCACACACTCTTCTAACCATCC | 58.400 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5026 | 6460 | 3.007940 | CCACACACTCTTCTAACCATCCA | 59.992 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
5027 | 6461 | 4.323792 | CCACACACTCTTCTAACCATCCAT | 60.324 | 45.833 | 0.00 | 0.00 | 0.00 | 3.41 |
5028 | 6462 | 5.248640 | CACACACTCTTCTAACCATCCATT | 58.751 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
5029 | 6463 | 6.406370 | CACACACTCTTCTAACCATCCATTA | 58.594 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
5030 | 6464 | 7.050377 | CACACACTCTTCTAACCATCCATTAT | 58.950 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
5031 | 6465 | 7.011763 | CACACACTCTTCTAACCATCCATTATG | 59.988 | 40.741 | 0.00 | 0.00 | 35.15 | 1.90 |
5032 | 6466 | 7.092891 | ACACACTCTTCTAACCATCCATTATGA | 60.093 | 37.037 | 0.00 | 0.00 | 37.86 | 2.15 |
5033 | 6467 | 7.225538 | CACACTCTTCTAACCATCCATTATGAC | 59.774 | 40.741 | 0.00 | 0.00 | 37.86 | 3.06 |
5034 | 6468 | 7.092891 | ACACTCTTCTAACCATCCATTATGACA | 60.093 | 37.037 | 0.00 | 0.00 | 37.86 | 3.58 |
5035 | 6469 | 7.225538 | CACTCTTCTAACCATCCATTATGACAC | 59.774 | 40.741 | 0.00 | 0.00 | 37.86 | 3.67 |
5036 | 6470 | 6.280643 | TCTTCTAACCATCCATTATGACACG | 58.719 | 40.000 | 0.00 | 0.00 | 37.86 | 4.49 |
5037 | 6471 | 5.607939 | TCTAACCATCCATTATGACACGT | 57.392 | 39.130 | 0.00 | 0.00 | 37.86 | 4.49 |
5038 | 6472 | 5.597806 | TCTAACCATCCATTATGACACGTC | 58.402 | 41.667 | 0.00 | 0.00 | 37.86 | 4.34 |
5039 | 6473 | 3.904800 | ACCATCCATTATGACACGTCA | 57.095 | 42.857 | 1.71 | 1.71 | 44.59 | 4.35 |
5040 | 6474 | 4.214986 | ACCATCCATTATGACACGTCAA | 57.785 | 40.909 | 3.61 | 0.00 | 43.58 | 3.18 |
5041 | 6475 | 4.584874 | ACCATCCATTATGACACGTCAAA | 58.415 | 39.130 | 3.61 | 1.28 | 43.58 | 2.69 |
5042 | 6476 | 4.394920 | ACCATCCATTATGACACGTCAAAC | 59.605 | 41.667 | 3.61 | 0.00 | 43.58 | 2.93 |
5043 | 6477 | 4.635765 | CCATCCATTATGACACGTCAAACT | 59.364 | 41.667 | 3.61 | 0.00 | 43.58 | 2.66 |
5044 | 6478 | 5.123820 | CCATCCATTATGACACGTCAAACTT | 59.876 | 40.000 | 3.61 | 0.00 | 43.58 | 2.66 |
5045 | 6479 | 6.349280 | CCATCCATTATGACACGTCAAACTTT | 60.349 | 38.462 | 3.61 | 0.00 | 43.58 | 2.66 |
5046 | 6480 | 6.627395 | TCCATTATGACACGTCAAACTTTT | 57.373 | 33.333 | 3.61 | 0.00 | 43.58 | 2.27 |
5047 | 6481 | 7.033530 | TCCATTATGACACGTCAAACTTTTT | 57.966 | 32.000 | 3.61 | 0.00 | 43.58 | 1.94 |
5048 | 6482 | 8.155821 | TCCATTATGACACGTCAAACTTTTTA | 57.844 | 30.769 | 3.61 | 0.00 | 43.58 | 1.52 |
5049 | 6483 | 8.622157 | TCCATTATGACACGTCAAACTTTTTAA | 58.378 | 29.630 | 3.61 | 0.00 | 43.58 | 1.52 |
5050 | 6484 | 9.405587 | CCATTATGACACGTCAAACTTTTTAAT | 57.594 | 29.630 | 3.61 | 0.00 | 43.58 | 1.40 |
5077 | 6511 | 5.833406 | TTCACACATGCATGTAAATAGGG | 57.167 | 39.130 | 30.92 | 19.55 | 39.39 | 3.53 |
5078 | 6512 | 5.109500 | TCACACATGCATGTAAATAGGGA | 57.891 | 39.130 | 30.92 | 21.48 | 39.39 | 4.20 |
5079 | 6513 | 4.881273 | TCACACATGCATGTAAATAGGGAC | 59.119 | 41.667 | 30.92 | 0.00 | 39.39 | 4.46 |
5080 | 6514 | 3.876914 | ACACATGCATGTAAATAGGGACG | 59.123 | 43.478 | 30.92 | 16.89 | 39.39 | 4.79 |
5081 | 6515 | 4.126437 | CACATGCATGTAAATAGGGACGA | 58.874 | 43.478 | 30.92 | 0.00 | 39.39 | 4.20 |
5082 | 6516 | 4.574421 | CACATGCATGTAAATAGGGACGAA | 59.426 | 41.667 | 30.92 | 0.00 | 39.39 | 3.85 |
5083 | 6517 | 5.065859 | CACATGCATGTAAATAGGGACGAAA | 59.934 | 40.000 | 30.92 | 0.00 | 39.39 | 3.46 |
5084 | 6518 | 5.650266 | ACATGCATGTAAATAGGGACGAAAA | 59.350 | 36.000 | 30.50 | 0.00 | 39.68 | 2.29 |
5085 | 6519 | 6.151985 | ACATGCATGTAAATAGGGACGAAAAA | 59.848 | 34.615 | 30.50 | 0.00 | 39.68 | 1.94 |
5086 | 6520 | 5.945155 | TGCATGTAAATAGGGACGAAAAAC | 58.055 | 37.500 | 0.00 | 0.00 | 0.00 | 2.43 |
5087 | 6521 | 5.473846 | TGCATGTAAATAGGGACGAAAAACA | 59.526 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
5088 | 6522 | 6.027749 | GCATGTAAATAGGGACGAAAAACAG | 58.972 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
5089 | 6523 | 6.128117 | GCATGTAAATAGGGACGAAAAACAGA | 60.128 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
5090 | 6524 | 7.415206 | GCATGTAAATAGGGACGAAAAACAGAT | 60.415 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
5091 | 6525 | 7.372451 | TGTAAATAGGGACGAAAAACAGATG | 57.628 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
5092 | 6526 | 7.162761 | TGTAAATAGGGACGAAAAACAGATGA | 58.837 | 34.615 | 0.00 | 0.00 | 0.00 | 2.92 |
5093 | 6527 | 7.827236 | TGTAAATAGGGACGAAAAACAGATGAT | 59.173 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
5094 | 6528 | 6.683974 | AATAGGGACGAAAAACAGATGATG | 57.316 | 37.500 | 0.00 | 0.00 | 0.00 | 3.07 |
5095 | 6529 | 4.021102 | AGGGACGAAAAACAGATGATGT | 57.979 | 40.909 | 0.00 | 0.00 | 46.97 | 3.06 |
5096 | 6530 | 4.003648 | AGGGACGAAAAACAGATGATGTC | 58.996 | 43.478 | 0.00 | 0.00 | 43.00 | 3.06 |
5097 | 6531 | 3.751175 | GGGACGAAAAACAGATGATGTCA | 59.249 | 43.478 | 0.00 | 0.00 | 43.00 | 3.58 |
5098 | 6532 | 4.142816 | GGGACGAAAAACAGATGATGTCAG | 60.143 | 45.833 | 0.00 | 0.00 | 43.00 | 3.51 |
5099 | 6533 | 4.398247 | GACGAAAAACAGATGATGTCAGC | 58.602 | 43.478 | 0.00 | 0.00 | 43.00 | 4.26 |
5100 | 6534 | 3.120546 | ACGAAAAACAGATGATGTCAGCG | 60.121 | 43.478 | 0.00 | 0.00 | 43.00 | 5.18 |
5101 | 6535 | 3.725895 | CGAAAAACAGATGATGTCAGCGG | 60.726 | 47.826 | 0.00 | 0.00 | 43.00 | 5.52 |
5102 | 6536 | 2.768253 | AAACAGATGATGTCAGCGGA | 57.232 | 45.000 | 5.47 | 0.00 | 43.00 | 5.54 |
5103 | 6537 | 2.768253 | AACAGATGATGTCAGCGGAA | 57.232 | 45.000 | 5.47 | 0.00 | 43.00 | 4.30 |
5104 | 6538 | 2.768253 | ACAGATGATGTCAGCGGAAA | 57.232 | 45.000 | 5.47 | 0.00 | 37.75 | 3.13 |
5105 | 6539 | 3.272574 | ACAGATGATGTCAGCGGAAAT | 57.727 | 42.857 | 5.47 | 0.00 | 37.75 | 2.17 |
5106 | 6540 | 3.201290 | ACAGATGATGTCAGCGGAAATC | 58.799 | 45.455 | 9.86 | 9.86 | 37.75 | 2.17 |
5107 | 6541 | 3.118482 | ACAGATGATGTCAGCGGAAATCT | 60.118 | 43.478 | 16.64 | 7.45 | 37.75 | 2.40 |
5108 | 6542 | 3.875727 | CAGATGATGTCAGCGGAAATCTT | 59.124 | 43.478 | 16.64 | 11.11 | 38.41 | 2.40 |
5109 | 6543 | 4.334759 | CAGATGATGTCAGCGGAAATCTTT | 59.665 | 41.667 | 16.64 | 5.82 | 38.41 | 2.52 |
5110 | 6544 | 4.946157 | AGATGATGTCAGCGGAAATCTTTT | 59.054 | 37.500 | 16.64 | 4.69 | 38.41 | 2.27 |
5111 | 6545 | 4.424061 | TGATGTCAGCGGAAATCTTTTG | 57.576 | 40.909 | 16.64 | 0.00 | 38.41 | 2.44 |
5112 | 6546 | 3.191162 | TGATGTCAGCGGAAATCTTTTGG | 59.809 | 43.478 | 16.64 | 0.00 | 38.41 | 3.28 |
5113 | 6547 | 1.885887 | TGTCAGCGGAAATCTTTTGGG | 59.114 | 47.619 | 0.00 | 0.00 | 0.00 | 4.12 |
5114 | 6548 | 1.886542 | GTCAGCGGAAATCTTTTGGGT | 59.113 | 47.619 | 0.00 | 0.00 | 0.00 | 4.51 |
5115 | 6549 | 2.296190 | GTCAGCGGAAATCTTTTGGGTT | 59.704 | 45.455 | 0.00 | 0.00 | 0.00 | 4.11 |
5116 | 6550 | 2.962421 | TCAGCGGAAATCTTTTGGGTTT | 59.038 | 40.909 | 0.00 | 0.00 | 0.00 | 3.27 |
5117 | 6551 | 3.386402 | TCAGCGGAAATCTTTTGGGTTTT | 59.614 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
5118 | 6552 | 3.740832 | CAGCGGAAATCTTTTGGGTTTTC | 59.259 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
5119 | 6553 | 3.386402 | AGCGGAAATCTTTTGGGTTTTCA | 59.614 | 39.130 | 0.00 | 0.00 | 31.29 | 2.69 |
5120 | 6554 | 4.123506 | GCGGAAATCTTTTGGGTTTTCAA | 58.876 | 39.130 | 0.00 | 0.00 | 31.29 | 2.69 |
5121 | 6555 | 4.572795 | GCGGAAATCTTTTGGGTTTTCAAA | 59.427 | 37.500 | 0.00 | 0.00 | 35.15 | 2.69 |
5122 | 6556 | 5.503357 | GCGGAAATCTTTTGGGTTTTCAAAC | 60.503 | 40.000 | 0.00 | 0.00 | 36.49 | 2.93 |
5123 | 6557 | 5.815222 | CGGAAATCTTTTGGGTTTTCAAACT | 59.185 | 36.000 | 2.55 | 0.00 | 38.89 | 2.66 |
5124 | 6558 | 6.315144 | CGGAAATCTTTTGGGTTTTCAAACTT | 59.685 | 34.615 | 2.55 | 0.00 | 38.89 | 2.66 |
5125 | 6559 | 7.148323 | CGGAAATCTTTTGGGTTTTCAAACTTT | 60.148 | 33.333 | 2.55 | 0.00 | 38.89 | 2.66 |
5126 | 6560 | 9.168451 | GGAAATCTTTTGGGTTTTCAAACTTTA | 57.832 | 29.630 | 2.55 | 0.00 | 38.89 | 1.85 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
87 | 89 | 5.359576 | GGGGAGATTGTATTAACATGTTGCA | 59.640 | 40.000 | 21.42 | 11.28 | 34.97 | 4.08 |
180 | 182 | 9.146586 | AGCATGATCTCTCTAAAAGAAGATACT | 57.853 | 33.333 | 0.00 | 0.00 | 32.23 | 2.12 |
313 | 315 | 9.807649 | GTGATTCCAGCTGTATTCAATTTTTAT | 57.192 | 29.630 | 13.81 | 0.00 | 0.00 | 1.40 |
329 | 331 | 1.514678 | TTGTGTGCCGTGATTCCAGC | 61.515 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
792 | 1460 | 0.376152 | CAAGCATAACAGCGCAGAGG | 59.624 | 55.000 | 11.47 | 0.00 | 40.15 | 3.69 |
819 | 1487 | 3.569701 | GGGAAAGAGCAGATTTCACACAA | 59.430 | 43.478 | 9.57 | 0.00 | 39.40 | 3.33 |
824 | 1492 | 4.581309 | AGATGGGAAAGAGCAGATTTCA | 57.419 | 40.909 | 9.57 | 0.00 | 38.21 | 2.69 |
909 | 1577 | 3.054802 | ACAAGCAAGGAGGAATAGAGGTG | 60.055 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
920 | 1588 | 1.471684 | GCAGGATCAACAAGCAAGGAG | 59.528 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
991 | 1659 | 0.395173 | AACCTTCACCGCCACAAACT | 60.395 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
1000 | 1672 | 1.196808 | CAATTCCACGAACCTTCACCG | 59.803 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
1042 | 1715 | 6.923199 | AAGGATTCCAAAGATGAAATGTGT | 57.077 | 33.333 | 5.29 | 0.00 | 0.00 | 3.72 |
1053 | 1726 | 4.584325 | TGTGACAGGAAAAGGATTCCAAAG | 59.416 | 41.667 | 5.29 | 2.30 | 41.00 | 2.77 |
1204 | 1880 | 0.386478 | CTGAAGCAGACAAAAGCGGC | 60.386 | 55.000 | 0.00 | 0.00 | 32.44 | 6.53 |
1449 | 2126 | 1.993956 | ACACAGTGGCAATTAAGGCA | 58.006 | 45.000 | 5.31 | 0.00 | 42.25 | 4.75 |
1508 | 2211 | 6.291377 | TGATTTGGTATATTCAGTCAGAGCC | 58.709 | 40.000 | 0.00 | 0.00 | 0.00 | 4.70 |
1611 | 2321 | 9.911788 | ATATCCACAGATAAATGATGGGTTATC | 57.088 | 33.333 | 0.00 | 0.00 | 38.47 | 1.75 |
1666 | 2376 | 5.178797 | CCGAGTATTGTGGAAGATTCTTGT | 58.821 | 41.667 | 3.03 | 0.00 | 0.00 | 3.16 |
1680 | 2393 | 2.681848 | AGTGTCCGAGTACCGAGTATTG | 59.318 | 50.000 | 5.46 | 0.00 | 41.76 | 1.90 |
1697 | 2410 | 9.046296 | CAAGTTTACTCTACAATCTGAAAGTGT | 57.954 | 33.333 | 0.00 | 0.00 | 33.76 | 3.55 |
1703 | 2416 | 7.095774 | GCGTTTCAAGTTTACTCTACAATCTGA | 60.096 | 37.037 | 0.00 | 0.00 | 0.00 | 3.27 |
1727 | 2440 | 5.034152 | GTGTTATGATAACCACCAATTGCG | 58.966 | 41.667 | 12.39 | 0.00 | 0.00 | 4.85 |
1845 | 2558 | 5.614324 | TGTAGCTTCCTGTGCAAGTATAT | 57.386 | 39.130 | 0.00 | 0.00 | 0.00 | 0.86 |
1872 | 2585 | 5.986135 | GCGATGTCATAATCTACCTGTTTCT | 59.014 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
1918 | 2631 | 6.332735 | TGCGTATGTAAGCAATCTCTAGAT | 57.667 | 37.500 | 0.00 | 0.00 | 40.78 | 1.98 |
2169 | 2894 | 3.560025 | GGTTTCCTCACATCATGTCCTGT | 60.560 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
2181 | 2906 | 5.301805 | TGAATTTTCCAGAAGGTTTCCTCAC | 59.698 | 40.000 | 0.00 | 0.00 | 35.89 | 3.51 |
2393 | 3499 | 2.476854 | GCGTTCAATGCTAAGCTTCAGG | 60.477 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2920 | 4236 | 3.950397 | AGGCGGTGATATCTTTGAAACA | 58.050 | 40.909 | 3.98 | 0.00 | 0.00 | 2.83 |
2921 | 4237 | 4.394920 | TGAAGGCGGTGATATCTTTGAAAC | 59.605 | 41.667 | 3.98 | 0.00 | 0.00 | 2.78 |
3007 | 4329 | 4.019174 | ACCATTGTTCAGATTCACATCCC | 58.981 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
3109 | 4431 | 6.202516 | TGGTGATTTTCTTCGTCAAGTTTT | 57.797 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
3157 | 4479 | 1.303309 | GGAATGCCCATTCTCACGAG | 58.697 | 55.000 | 17.63 | 0.00 | 44.90 | 4.18 |
3202 | 4524 | 3.402628 | TTCTTGTGCTACCTCCTGAAC | 57.597 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
3447 | 4769 | 0.468226 | TGAGGAACAGTGTCGCCTTT | 59.532 | 50.000 | 16.28 | 0.00 | 0.00 | 3.11 |
3494 | 4816 | 3.411415 | GCTGCAGCAGTTATAACAAGG | 57.589 | 47.619 | 33.36 | 7.79 | 41.59 | 3.61 |
3606 | 4928 | 0.409876 | TAGACCACTGTGCTCTCCCT | 59.590 | 55.000 | 8.81 | 0.00 | 0.00 | 4.20 |
3644 | 4966 | 5.578336 | TCAAAGCTTCAGAGTCGTATCAATG | 59.422 | 40.000 | 0.00 | 0.00 | 0.00 | 2.82 |
3645 | 4967 | 5.578727 | GTCAAAGCTTCAGAGTCGTATCAAT | 59.421 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3670 | 4992 | 3.951775 | TTGGTTTTGAACAGTTGCAGT | 57.048 | 38.095 | 0.00 | 0.00 | 0.00 | 4.40 |
3683 | 5005 | 6.072728 | GCTTTTTGGAAACAGTCTTTGGTTTT | 60.073 | 34.615 | 0.00 | 0.00 | 44.54 | 2.43 |
3698 | 5020 | 4.148128 | TGCTTGAATTGGCTTTTTGGAA | 57.852 | 36.364 | 0.00 | 0.00 | 0.00 | 3.53 |
3703 | 5028 | 5.343249 | GTCGATATGCTTGAATTGGCTTTT | 58.657 | 37.500 | 0.00 | 0.00 | 0.00 | 2.27 |
3722 | 5047 | 0.888619 | ATGTCTTCTTGAGGCGTCGA | 59.111 | 50.000 | 0.00 | 0.00 | 30.55 | 4.20 |
3727 | 5052 | 3.269178 | CTTCTGGATGTCTTCTTGAGGC | 58.731 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
3786 | 5111 | 5.216614 | GGAGTAGTAGATTCCCATCAACC | 57.783 | 47.826 | 0.00 | 0.00 | 0.00 | 3.77 |
3845 | 5170 | 3.345508 | AATTTGGAACGGAGGGAGTAC | 57.654 | 47.619 | 0.00 | 0.00 | 0.00 | 2.73 |
3846 | 5171 | 4.098894 | AGTAATTTGGAACGGAGGGAGTA | 58.901 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
3847 | 5172 | 2.910977 | AGTAATTTGGAACGGAGGGAGT | 59.089 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
3848 | 5173 | 3.629142 | AGTAATTTGGAACGGAGGGAG | 57.371 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
3849 | 5174 | 3.073356 | ACAAGTAATTTGGAACGGAGGGA | 59.927 | 43.478 | 0.00 | 0.00 | 41.25 | 4.20 |
3850 | 5175 | 3.418047 | ACAAGTAATTTGGAACGGAGGG | 58.582 | 45.455 | 0.00 | 0.00 | 41.25 | 4.30 |
3851 | 5176 | 4.324267 | AGACAAGTAATTTGGAACGGAGG | 58.676 | 43.478 | 0.00 | 0.00 | 41.25 | 4.30 |
3852 | 5177 | 4.994852 | TGAGACAAGTAATTTGGAACGGAG | 59.005 | 41.667 | 0.00 | 0.00 | 41.25 | 4.63 |
3853 | 5178 | 4.963373 | TGAGACAAGTAATTTGGAACGGA | 58.037 | 39.130 | 0.00 | 0.00 | 41.25 | 4.69 |
3854 | 5179 | 5.682943 | TTGAGACAAGTAATTTGGAACGG | 57.317 | 39.130 | 0.00 | 0.00 | 41.25 | 4.44 |
3855 | 5180 | 7.165812 | CACTTTTGAGACAAGTAATTTGGAACG | 59.834 | 37.037 | 0.00 | 0.00 | 41.25 | 3.95 |
3856 | 5181 | 7.435192 | CCACTTTTGAGACAAGTAATTTGGAAC | 59.565 | 37.037 | 0.00 | 0.00 | 41.25 | 3.62 |
3857 | 5182 | 7.340743 | TCCACTTTTGAGACAAGTAATTTGGAA | 59.659 | 33.333 | 0.00 | 0.00 | 41.25 | 3.53 |
3858 | 5183 | 6.831353 | TCCACTTTTGAGACAAGTAATTTGGA | 59.169 | 34.615 | 0.00 | 0.00 | 41.25 | 3.53 |
3859 | 5184 | 7.038154 | TCCACTTTTGAGACAAGTAATTTGG | 57.962 | 36.000 | 0.00 | 0.00 | 41.25 | 3.28 |
3866 | 5191 | 8.143835 | CCATTTTTATCCACTTTTGAGACAAGT | 58.856 | 33.333 | 0.00 | 0.00 | 34.67 | 3.16 |
3867 | 5192 | 8.359642 | TCCATTTTTATCCACTTTTGAGACAAG | 58.640 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
3868 | 5193 | 8.243961 | TCCATTTTTATCCACTTTTGAGACAA | 57.756 | 30.769 | 0.00 | 0.00 | 0.00 | 3.18 |
3869 | 5194 | 7.831691 | TCCATTTTTATCCACTTTTGAGACA | 57.168 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3870 | 5195 | 8.306761 | ACATCCATTTTTATCCACTTTTGAGAC | 58.693 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
3871 | 5196 | 8.421249 | ACATCCATTTTTATCCACTTTTGAGA | 57.579 | 30.769 | 0.00 | 0.00 | 0.00 | 3.27 |
3901 | 5226 | 9.962783 | GGATGTATCTAGACGTATTTTAGTTGT | 57.037 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
3902 | 5227 | 9.961265 | TGGATGTATCTAGACGTATTTTAGTTG | 57.039 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
3908 | 5233 | 9.698309 | CAGAAATGGATGTATCTAGACGTATTT | 57.302 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
3909 | 5234 | 8.861086 | ACAGAAATGGATGTATCTAGACGTATT | 58.139 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
3910 | 5235 | 8.300286 | CACAGAAATGGATGTATCTAGACGTAT | 58.700 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
3911 | 5236 | 7.501225 | TCACAGAAATGGATGTATCTAGACGTA | 59.499 | 37.037 | 0.00 | 0.00 | 0.00 | 3.57 |
3912 | 5237 | 6.321435 | TCACAGAAATGGATGTATCTAGACGT | 59.679 | 38.462 | 0.00 | 0.00 | 0.00 | 4.34 |
3913 | 5238 | 6.638873 | GTCACAGAAATGGATGTATCTAGACG | 59.361 | 42.308 | 0.00 | 0.00 | 0.00 | 4.18 |
3914 | 5239 | 7.492524 | TGTCACAGAAATGGATGTATCTAGAC | 58.507 | 38.462 | 0.00 | 0.00 | 31.82 | 2.59 |
3915 | 5240 | 7.660030 | TGTCACAGAAATGGATGTATCTAGA | 57.340 | 36.000 | 0.00 | 0.00 | 0.00 | 2.43 |
3916 | 5241 | 8.899427 | ATTGTCACAGAAATGGATGTATCTAG | 57.101 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
3918 | 5243 | 9.685276 | TTAATTGTCACAGAAATGGATGTATCT | 57.315 | 29.630 | 0.00 | 0.00 | 0.00 | 1.98 |
3922 | 5247 | 8.253113 | GGAATTAATTGTCACAGAAATGGATGT | 58.747 | 33.333 | 5.17 | 0.00 | 0.00 | 3.06 |
3923 | 5248 | 7.707893 | GGGAATTAATTGTCACAGAAATGGATG | 59.292 | 37.037 | 5.17 | 0.00 | 0.00 | 3.51 |
3924 | 5249 | 7.399765 | TGGGAATTAATTGTCACAGAAATGGAT | 59.600 | 33.333 | 5.17 | 0.00 | 0.00 | 3.41 |
3925 | 5250 | 6.723515 | TGGGAATTAATTGTCACAGAAATGGA | 59.276 | 34.615 | 5.17 | 0.00 | 0.00 | 3.41 |
3926 | 5251 | 6.934056 | TGGGAATTAATTGTCACAGAAATGG | 58.066 | 36.000 | 5.17 | 0.00 | 0.00 | 3.16 |
3927 | 5252 | 7.062138 | CGTTGGGAATTAATTGTCACAGAAATG | 59.938 | 37.037 | 5.17 | 0.00 | 0.00 | 2.32 |
3928 | 5253 | 7.090173 | CGTTGGGAATTAATTGTCACAGAAAT | 58.910 | 34.615 | 5.17 | 0.00 | 0.00 | 2.17 |
3929 | 5254 | 6.442952 | CGTTGGGAATTAATTGTCACAGAAA | 58.557 | 36.000 | 5.17 | 0.00 | 0.00 | 2.52 |
3930 | 5255 | 5.048364 | CCGTTGGGAATTAATTGTCACAGAA | 60.048 | 40.000 | 5.17 | 0.00 | 34.06 | 3.02 |
3931 | 5256 | 4.457603 | CCGTTGGGAATTAATTGTCACAGA | 59.542 | 41.667 | 5.17 | 0.00 | 34.06 | 3.41 |
3932 | 5257 | 4.457603 | TCCGTTGGGAATTAATTGTCACAG | 59.542 | 41.667 | 5.17 | 1.15 | 40.15 | 3.66 |
3933 | 5258 | 4.399219 | TCCGTTGGGAATTAATTGTCACA | 58.601 | 39.130 | 5.17 | 0.00 | 40.15 | 3.58 |
3934 | 5259 | 4.142469 | CCTCCGTTGGGAATTAATTGTCAC | 60.142 | 45.833 | 5.17 | 0.00 | 43.27 | 3.67 |
3935 | 5260 | 4.013728 | CCTCCGTTGGGAATTAATTGTCA | 58.986 | 43.478 | 5.17 | 0.86 | 43.27 | 3.58 |
3936 | 5261 | 4.632538 | CCTCCGTTGGGAATTAATTGTC | 57.367 | 45.455 | 5.17 | 0.00 | 43.27 | 3.18 |
3948 | 5273 | 3.449737 | TGATTTAGTACTCCCTCCGTTGG | 59.550 | 47.826 | 0.00 | 0.00 | 0.00 | 3.77 |
3949 | 5274 | 4.683832 | CTGATTTAGTACTCCCTCCGTTG | 58.316 | 47.826 | 0.00 | 0.00 | 0.00 | 4.10 |
3950 | 5275 | 3.132467 | GCTGATTTAGTACTCCCTCCGTT | 59.868 | 47.826 | 0.00 | 0.00 | 0.00 | 4.44 |
3951 | 5276 | 2.694109 | GCTGATTTAGTACTCCCTCCGT | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
3952 | 5277 | 2.287668 | CGCTGATTTAGTACTCCCTCCG | 60.288 | 54.545 | 0.00 | 0.00 | 0.00 | 4.63 |
3953 | 5278 | 2.957006 | TCGCTGATTTAGTACTCCCTCC | 59.043 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3954 | 5279 | 3.380637 | TGTCGCTGATTTAGTACTCCCTC | 59.619 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
3955 | 5280 | 3.362706 | TGTCGCTGATTTAGTACTCCCT | 58.637 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
3956 | 5281 | 3.795623 | TGTCGCTGATTTAGTACTCCC | 57.204 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
3957 | 5282 | 7.766219 | TTAATTGTCGCTGATTTAGTACTCC | 57.234 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4038 | 5364 | 4.524053 | TCTAGAGACCGCAATAGAGTTGA | 58.476 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
4053 | 5379 | 2.094700 | ACGATGCTTGCGTTTCTAGAGA | 60.095 | 45.455 | 0.00 | 0.00 | 39.18 | 3.10 |
4068 | 5394 | 4.483476 | ACAAAGGTAACAAGAACGATGC | 57.517 | 40.909 | 0.00 | 0.00 | 41.41 | 3.91 |
4161 | 5487 | 3.112263 | AGATAAATGGAACCACCGGAGA | 58.888 | 45.455 | 9.46 | 0.00 | 42.61 | 3.71 |
4165 | 5491 | 3.206150 | CAGGAGATAAATGGAACCACCG | 58.794 | 50.000 | 0.00 | 0.00 | 42.61 | 4.94 |
4206 | 5532 | 5.861251 | TCAAAACATAAAATCACATCACGCC | 59.139 | 36.000 | 0.00 | 0.00 | 0.00 | 5.68 |
4219 | 5545 | 6.096141 | TGTTCTCCAGCAACTCAAAACATAAA | 59.904 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
4363 | 5689 | 2.371658 | AAACAGAAAGCCTTGGCTCT | 57.628 | 45.000 | 15.10 | 0.00 | 0.00 | 4.09 |
4403 | 5729 | 2.995466 | TCTCAAAATTGCTCAAGCGG | 57.005 | 45.000 | 0.00 | 0.00 | 45.83 | 5.52 |
4405 | 5731 | 7.081526 | TCTTCTATCTCAAAATTGCTCAAGC | 57.918 | 36.000 | 0.00 | 0.00 | 42.50 | 4.01 |
4437 | 5794 | 4.436050 | CCTGCTTGAAATACTGCACTTACG | 60.436 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
4570 | 5997 | 4.227527 | AGAATTTTGGGACGAAGGGAGTAT | 59.772 | 41.667 | 0.00 | 0.00 | 0.00 | 2.12 |
4571 | 5998 | 3.585732 | AGAATTTTGGGACGAAGGGAGTA | 59.414 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
4572 | 5999 | 2.375509 | AGAATTTTGGGACGAAGGGAGT | 59.624 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
4573 | 6000 | 3.073274 | AGAATTTTGGGACGAAGGGAG | 57.927 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
4574 | 6001 | 3.153919 | CAAGAATTTTGGGACGAAGGGA | 58.846 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
4575 | 6002 | 2.890945 | ACAAGAATTTTGGGACGAAGGG | 59.109 | 45.455 | 0.00 | 0.00 | 0.00 | 3.95 |
4576 | 6003 | 3.821033 | AGACAAGAATTTTGGGACGAAGG | 59.179 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
4577 | 6004 | 5.438761 | AAGACAAGAATTTTGGGACGAAG | 57.561 | 39.130 | 0.00 | 0.00 | 0.00 | 3.79 |
4578 | 6005 | 6.292923 | TCTAAGACAAGAATTTTGGGACGAA | 58.707 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4579 | 6006 | 5.860611 | TCTAAGACAAGAATTTTGGGACGA | 58.139 | 37.500 | 0.00 | 0.00 | 0.00 | 4.20 |
4580 | 6007 | 6.743575 | ATCTAAGACAAGAATTTTGGGACG | 57.256 | 37.500 | 5.68 | 0.00 | 0.00 | 4.79 |
4581 | 6008 | 8.360390 | ACAAATCTAAGACAAGAATTTTGGGAC | 58.640 | 33.333 | 0.00 | 0.00 | 33.04 | 4.46 |
4582 | 6009 | 8.477419 | ACAAATCTAAGACAAGAATTTTGGGA | 57.523 | 30.769 | 0.00 | 0.00 | 33.04 | 4.37 |
4583 | 6010 | 8.579863 | AGACAAATCTAAGACAAGAATTTTGGG | 58.420 | 33.333 | 0.00 | 0.00 | 33.04 | 4.12 |
4591 | 6018 | 9.582431 | CCGTATTTAGACAAATCTAAGACAAGA | 57.418 | 33.333 | 9.81 | 0.00 | 45.93 | 3.02 |
4592 | 6019 | 9.582431 | TCCGTATTTAGACAAATCTAAGACAAG | 57.418 | 33.333 | 9.81 | 3.88 | 45.93 | 3.16 |
4594 | 6021 | 9.529325 | CATCCGTATTTAGACAAATCTAAGACA | 57.471 | 33.333 | 9.81 | 0.00 | 45.93 | 3.41 |
4595 | 6022 | 9.530633 | ACATCCGTATTTAGACAAATCTAAGAC | 57.469 | 33.333 | 0.00 | 0.83 | 45.93 | 3.01 |
4602 | 6029 | 9.832445 | ACTTGATACATCCGTATTTAGACAAAT | 57.168 | 29.630 | 0.00 | 0.00 | 38.48 | 2.32 |
4603 | 6030 | 9.309516 | GACTTGATACATCCGTATTTAGACAAA | 57.690 | 33.333 | 0.00 | 0.00 | 38.48 | 2.83 |
4604 | 6031 | 8.471609 | TGACTTGATACATCCGTATTTAGACAA | 58.528 | 33.333 | 0.00 | 0.00 | 38.48 | 3.18 |
4605 | 6032 | 7.919091 | GTGACTTGATACATCCGTATTTAGACA | 59.081 | 37.037 | 0.00 | 0.00 | 38.48 | 3.41 |
4606 | 6033 | 7.113124 | CGTGACTTGATACATCCGTATTTAGAC | 59.887 | 40.741 | 0.00 | 0.00 | 38.48 | 2.59 |
4607 | 6034 | 7.136772 | CGTGACTTGATACATCCGTATTTAGA | 58.863 | 38.462 | 0.00 | 0.00 | 38.48 | 2.10 |
4608 | 6035 | 6.916387 | ACGTGACTTGATACATCCGTATTTAG | 59.084 | 38.462 | 0.00 | 0.00 | 38.48 | 1.85 |
4609 | 6036 | 6.798482 | ACGTGACTTGATACATCCGTATTTA | 58.202 | 36.000 | 0.00 | 0.00 | 38.48 | 1.40 |
4610 | 6037 | 5.657474 | ACGTGACTTGATACATCCGTATTT | 58.343 | 37.500 | 0.00 | 0.00 | 38.48 | 1.40 |
4611 | 6038 | 5.258456 | ACGTGACTTGATACATCCGTATT | 57.742 | 39.130 | 0.00 | 0.00 | 38.48 | 1.89 |
4612 | 6039 | 4.913335 | ACGTGACTTGATACATCCGTAT | 57.087 | 40.909 | 0.00 | 0.00 | 41.16 | 3.06 |
4613 | 6040 | 4.707030 | AACGTGACTTGATACATCCGTA | 57.293 | 40.909 | 0.00 | 0.00 | 0.00 | 4.02 |
4614 | 6041 | 3.587797 | AACGTGACTTGATACATCCGT | 57.412 | 42.857 | 0.00 | 0.00 | 0.00 | 4.69 |
4615 | 6042 | 4.921470 | AAAACGTGACTTGATACATCCG | 57.079 | 40.909 | 0.00 | 0.00 | 0.00 | 4.18 |
4616 | 6043 | 6.963049 | ACTAAAACGTGACTTGATACATCC | 57.037 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
4626 | 6053 | 9.962783 | GGATGTATCTAATACTAAAACGTGACT | 57.037 | 33.333 | 0.00 | 0.00 | 36.70 | 3.41 |
4627 | 6054 | 8.899776 | CGGATGTATCTAATACTAAAACGTGAC | 58.100 | 37.037 | 0.00 | 0.00 | 36.70 | 3.67 |
4628 | 6055 | 8.623903 | ACGGATGTATCTAATACTAAAACGTGA | 58.376 | 33.333 | 0.00 | 0.00 | 36.70 | 4.35 |
4629 | 6056 | 8.792831 | ACGGATGTATCTAATACTAAAACGTG | 57.207 | 34.615 | 0.00 | 0.00 | 36.70 | 4.49 |
4647 | 6074 | 9.530633 | GTCTTAAATTTGTCTAGATACGGATGT | 57.469 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
4648 | 6075 | 9.529325 | TGTCTTAAATTTGTCTAGATACGGATG | 57.471 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
4650 | 6077 | 9.932207 | TTTGTCTTAAATTTGTCTAGATACGGA | 57.068 | 29.630 | 0.00 | 0.00 | 0.00 | 4.69 |
4662 | 6089 | 9.432077 | CGTCCCAAAATTTTTGTCTTAAATTTG | 57.568 | 29.630 | 18.05 | 2.04 | 41.71 | 2.32 |
4663 | 6090 | 8.616942 | CCGTCCCAAAATTTTTGTCTTAAATTT | 58.383 | 29.630 | 18.05 | 0.00 | 43.39 | 1.82 |
4664 | 6091 | 7.988028 | TCCGTCCCAAAATTTTTGTCTTAAATT | 59.012 | 29.630 | 18.05 | 0.00 | 36.91 | 1.82 |
4665 | 6092 | 7.501844 | TCCGTCCCAAAATTTTTGTCTTAAAT | 58.498 | 30.769 | 18.05 | 0.00 | 0.00 | 1.40 |
4666 | 6093 | 6.875076 | TCCGTCCCAAAATTTTTGTCTTAAA | 58.125 | 32.000 | 18.05 | 0.69 | 0.00 | 1.52 |
4667 | 6094 | 6.466885 | TCCGTCCCAAAATTTTTGTCTTAA | 57.533 | 33.333 | 18.05 | 0.26 | 0.00 | 1.85 |
4668 | 6095 | 6.461788 | CCTTCCGTCCCAAAATTTTTGTCTTA | 60.462 | 38.462 | 18.05 | 1.26 | 0.00 | 2.10 |
4669 | 6096 | 5.346181 | TTCCGTCCCAAAATTTTTGTCTT | 57.654 | 34.783 | 18.05 | 0.00 | 0.00 | 3.01 |
4670 | 6097 | 4.202212 | CCTTCCGTCCCAAAATTTTTGTCT | 60.202 | 41.667 | 18.05 | 0.00 | 0.00 | 3.41 |
4671 | 6098 | 4.055360 | CCTTCCGTCCCAAAATTTTTGTC | 58.945 | 43.478 | 18.05 | 9.04 | 0.00 | 3.18 |
4672 | 6099 | 3.707102 | TCCTTCCGTCCCAAAATTTTTGT | 59.293 | 39.130 | 18.05 | 0.00 | 0.00 | 2.83 |
4673 | 6100 | 4.202212 | ACTCCTTCCGTCCCAAAATTTTTG | 60.202 | 41.667 | 13.76 | 13.76 | 0.00 | 2.44 |
4674 | 6101 | 3.964688 | ACTCCTTCCGTCCCAAAATTTTT | 59.035 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
4675 | 6102 | 3.572642 | ACTCCTTCCGTCCCAAAATTTT | 58.427 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
4676 | 6103 | 3.238788 | ACTCCTTCCGTCCCAAAATTT | 57.761 | 42.857 | 0.00 | 0.00 | 0.00 | 1.82 |
4677 | 6104 | 2.971901 | ACTCCTTCCGTCCCAAAATT | 57.028 | 45.000 | 0.00 | 0.00 | 0.00 | 1.82 |
4678 | 6105 | 2.026542 | GGTACTCCTTCCGTCCCAAAAT | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
4679 | 6106 | 1.348696 | GGTACTCCTTCCGTCCCAAAA | 59.651 | 52.381 | 0.00 | 0.00 | 0.00 | 2.44 |
4680 | 6107 | 0.978907 | GGTACTCCTTCCGTCCCAAA | 59.021 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
4681 | 6108 | 0.115745 | AGGTACTCCTTCCGTCCCAA | 59.884 | 55.000 | 0.00 | 0.00 | 42.12 | 4.12 |
4682 | 6109 | 1.778981 | AGGTACTCCTTCCGTCCCA | 59.221 | 57.895 | 0.00 | 0.00 | 42.12 | 4.37 |
4683 | 6110 | 4.781264 | AGGTACTCCTTCCGTCCC | 57.219 | 61.111 | 0.00 | 0.00 | 42.12 | 4.46 |
4692 | 6119 | 7.752686 | CGTTTAGTCTAGTTTGTAAGGTACTCC | 59.247 | 40.741 | 0.00 | 0.00 | 38.49 | 3.85 |
4693 | 6120 | 8.507249 | TCGTTTAGTCTAGTTTGTAAGGTACTC | 58.493 | 37.037 | 0.00 | 0.00 | 38.49 | 2.59 |
4695 | 6122 | 9.463443 | TTTCGTTTAGTCTAGTTTGTAAGGTAC | 57.537 | 33.333 | 0.00 | 0.00 | 0.00 | 3.34 |
4696 | 6123 | 9.463443 | GTTTCGTTTAGTCTAGTTTGTAAGGTA | 57.537 | 33.333 | 0.00 | 0.00 | 0.00 | 3.08 |
4728 | 6155 | 4.393990 | ACCTTAACCGGTGATTTTCGAATC | 59.606 | 41.667 | 8.52 | 0.00 | 35.52 | 2.52 |
4801 | 6230 | 5.065218 | ACGTAATTCTAGGCAGATGCAAAAG | 59.935 | 40.000 | 7.19 | 0.96 | 44.36 | 2.27 |
4806 | 6235 | 3.983741 | AGACGTAATTCTAGGCAGATGC | 58.016 | 45.455 | 0.00 | 0.00 | 41.14 | 3.91 |
4813 | 6242 | 4.571372 | GTCCTGGAGACGTAATTCTAGG | 57.429 | 50.000 | 15.98 | 15.98 | 41.84 | 3.02 |
4824 | 6253 | 6.935208 | GGTTTTGTATATATGGTCCTGGAGAC | 59.065 | 42.308 | 0.00 | 0.00 | 45.51 | 3.36 |
4878 | 6307 | 2.674747 | GCATCTAGATCTAGCAGCAGCC | 60.675 | 54.545 | 27.37 | 10.78 | 43.56 | 4.85 |
4921 | 6350 | 2.681848 | GCATGCAGAGCACAAGTCTAAT | 59.318 | 45.455 | 14.21 | 0.00 | 43.04 | 1.73 |
4922 | 6351 | 2.079158 | GCATGCAGAGCACAAGTCTAA | 58.921 | 47.619 | 14.21 | 0.00 | 43.04 | 2.10 |
4923 | 6352 | 1.002315 | TGCATGCAGAGCACAAGTCTA | 59.998 | 47.619 | 18.46 | 0.00 | 43.04 | 2.59 |
4924 | 6353 | 0.250597 | TGCATGCAGAGCACAAGTCT | 60.251 | 50.000 | 18.46 | 0.00 | 43.04 | 3.24 |
4925 | 6354 | 0.168348 | CTGCATGCAGAGCACAAGTC | 59.832 | 55.000 | 38.90 | 0.00 | 46.30 | 3.01 |
4926 | 6355 | 1.863662 | GCTGCATGCAGAGCACAAGT | 61.864 | 55.000 | 44.02 | 0.00 | 46.30 | 3.16 |
4927 | 6356 | 1.154016 | GCTGCATGCAGAGCACAAG | 60.154 | 57.895 | 44.02 | 21.49 | 46.30 | 3.16 |
4959 | 6393 | 7.172190 | AGTCATGTCATTAGAGTTGAACACTTG | 59.828 | 37.037 | 0.00 | 0.00 | 35.01 | 3.16 |
4992 | 6426 | 4.021925 | GTGTGGCCCGAGCTCCTT | 62.022 | 66.667 | 8.47 | 0.00 | 39.73 | 3.36 |
4995 | 6429 | 3.941657 | GAGTGTGTGGCCCGAGCTC | 62.942 | 68.421 | 2.73 | 2.73 | 39.73 | 4.09 |
4996 | 6430 | 4.008933 | GAGTGTGTGGCCCGAGCT | 62.009 | 66.667 | 0.00 | 0.00 | 39.73 | 4.09 |
4997 | 6431 | 3.537206 | AAGAGTGTGTGGCCCGAGC | 62.537 | 63.158 | 0.00 | 0.00 | 38.76 | 5.03 |
4998 | 6432 | 1.374758 | GAAGAGTGTGTGGCCCGAG | 60.375 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
4999 | 6433 | 0.541063 | TAGAAGAGTGTGTGGCCCGA | 60.541 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
5000 | 6434 | 0.320374 | TTAGAAGAGTGTGTGGCCCG | 59.680 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
5001 | 6435 | 1.610886 | GGTTAGAAGAGTGTGTGGCCC | 60.611 | 57.143 | 0.00 | 0.00 | 0.00 | 5.80 |
5002 | 6436 | 1.071699 | TGGTTAGAAGAGTGTGTGGCC | 59.928 | 52.381 | 0.00 | 0.00 | 0.00 | 5.36 |
5003 | 6437 | 2.543777 | TGGTTAGAAGAGTGTGTGGC | 57.456 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
5004 | 6438 | 3.007940 | TGGATGGTTAGAAGAGTGTGTGG | 59.992 | 47.826 | 0.00 | 0.00 | 0.00 | 4.17 |
5005 | 6439 | 4.271696 | TGGATGGTTAGAAGAGTGTGTG | 57.728 | 45.455 | 0.00 | 0.00 | 0.00 | 3.82 |
5006 | 6440 | 5.505181 | AATGGATGGTTAGAAGAGTGTGT | 57.495 | 39.130 | 0.00 | 0.00 | 0.00 | 3.72 |
5007 | 6441 | 7.225538 | GTCATAATGGATGGTTAGAAGAGTGTG | 59.774 | 40.741 | 0.00 | 0.00 | 36.08 | 3.82 |
5008 | 6442 | 7.092891 | TGTCATAATGGATGGTTAGAAGAGTGT | 60.093 | 37.037 | 0.00 | 0.00 | 36.08 | 3.55 |
5009 | 6443 | 7.225538 | GTGTCATAATGGATGGTTAGAAGAGTG | 59.774 | 40.741 | 0.00 | 0.00 | 36.08 | 3.51 |
5010 | 6444 | 7.275920 | GTGTCATAATGGATGGTTAGAAGAGT | 58.724 | 38.462 | 0.00 | 0.00 | 36.08 | 3.24 |
5011 | 6445 | 6.422100 | CGTGTCATAATGGATGGTTAGAAGAG | 59.578 | 42.308 | 0.00 | 0.00 | 36.08 | 2.85 |
5012 | 6446 | 6.127168 | ACGTGTCATAATGGATGGTTAGAAGA | 60.127 | 38.462 | 0.00 | 0.00 | 36.08 | 2.87 |
5013 | 6447 | 6.049149 | ACGTGTCATAATGGATGGTTAGAAG | 58.951 | 40.000 | 0.00 | 0.00 | 36.08 | 2.85 |
5014 | 6448 | 5.984725 | ACGTGTCATAATGGATGGTTAGAA | 58.015 | 37.500 | 0.00 | 0.00 | 36.08 | 2.10 |
5015 | 6449 | 5.128008 | TGACGTGTCATAATGGATGGTTAGA | 59.872 | 40.000 | 0.00 | 0.00 | 36.08 | 2.10 |
5016 | 6450 | 5.356426 | TGACGTGTCATAATGGATGGTTAG | 58.644 | 41.667 | 0.00 | 0.00 | 36.08 | 2.34 |
5017 | 6451 | 5.346181 | TGACGTGTCATAATGGATGGTTA | 57.654 | 39.130 | 0.00 | 0.00 | 36.08 | 2.85 |
5018 | 6452 | 4.214986 | TGACGTGTCATAATGGATGGTT | 57.785 | 40.909 | 0.00 | 0.00 | 36.08 | 3.67 |
5019 | 6453 | 3.904800 | TGACGTGTCATAATGGATGGT | 57.095 | 42.857 | 0.00 | 0.00 | 36.08 | 3.55 |
5020 | 6454 | 4.635765 | AGTTTGACGTGTCATAATGGATGG | 59.364 | 41.667 | 3.14 | 0.00 | 39.64 | 3.51 |
5021 | 6455 | 5.801350 | AGTTTGACGTGTCATAATGGATG | 57.199 | 39.130 | 3.14 | 0.00 | 39.64 | 3.51 |
5022 | 6456 | 6.817765 | AAAGTTTGACGTGTCATAATGGAT | 57.182 | 33.333 | 3.14 | 0.00 | 39.64 | 3.41 |
5023 | 6457 | 6.627395 | AAAAGTTTGACGTGTCATAATGGA | 57.373 | 33.333 | 3.14 | 0.00 | 39.64 | 3.41 |
5024 | 6458 | 8.789881 | TTAAAAAGTTTGACGTGTCATAATGG | 57.210 | 30.769 | 3.14 | 0.00 | 39.64 | 3.16 |
5052 | 6486 | 7.039434 | TCCCTATTTACATGCATGTGTGAAAAA | 60.039 | 33.333 | 36.72 | 28.19 | 41.89 | 1.94 |
5053 | 6487 | 6.435591 | TCCCTATTTACATGCATGTGTGAAAA | 59.564 | 34.615 | 36.72 | 28.51 | 41.89 | 2.29 |
5054 | 6488 | 5.948758 | TCCCTATTTACATGCATGTGTGAAA | 59.051 | 36.000 | 36.72 | 28.82 | 41.89 | 2.69 |
5055 | 6489 | 5.356751 | GTCCCTATTTACATGCATGTGTGAA | 59.643 | 40.000 | 36.72 | 27.39 | 41.89 | 3.18 |
5056 | 6490 | 4.881273 | GTCCCTATTTACATGCATGTGTGA | 59.119 | 41.667 | 36.72 | 23.65 | 41.89 | 3.58 |
5057 | 6491 | 4.260743 | CGTCCCTATTTACATGCATGTGTG | 60.261 | 45.833 | 36.72 | 21.83 | 41.89 | 3.82 |
5058 | 6492 | 3.876914 | CGTCCCTATTTACATGCATGTGT | 59.123 | 43.478 | 36.72 | 25.04 | 41.89 | 3.72 |
5059 | 6493 | 4.126437 | TCGTCCCTATTTACATGCATGTG | 58.874 | 43.478 | 36.72 | 21.86 | 41.89 | 3.21 |
5060 | 6494 | 4.415881 | TCGTCCCTATTTACATGCATGT | 57.584 | 40.909 | 33.20 | 33.20 | 44.48 | 3.21 |
5061 | 6495 | 5.749596 | TTTCGTCCCTATTTACATGCATG | 57.250 | 39.130 | 25.09 | 25.09 | 0.00 | 4.06 |
5062 | 6496 | 6.151985 | TGTTTTTCGTCCCTATTTACATGCAT | 59.848 | 34.615 | 0.00 | 0.00 | 0.00 | 3.96 |
5063 | 6497 | 5.473846 | TGTTTTTCGTCCCTATTTACATGCA | 59.526 | 36.000 | 0.00 | 0.00 | 0.00 | 3.96 |
5064 | 6498 | 5.945155 | TGTTTTTCGTCCCTATTTACATGC | 58.055 | 37.500 | 0.00 | 0.00 | 0.00 | 4.06 |
5065 | 6499 | 7.372451 | TCTGTTTTTCGTCCCTATTTACATG | 57.628 | 36.000 | 0.00 | 0.00 | 0.00 | 3.21 |
5066 | 6500 | 7.827236 | TCATCTGTTTTTCGTCCCTATTTACAT | 59.173 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
5067 | 6501 | 7.162761 | TCATCTGTTTTTCGTCCCTATTTACA | 58.837 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
5068 | 6502 | 7.605410 | TCATCTGTTTTTCGTCCCTATTTAC | 57.395 | 36.000 | 0.00 | 0.00 | 0.00 | 2.01 |
5069 | 6503 | 7.827236 | ACATCATCTGTTTTTCGTCCCTATTTA | 59.173 | 33.333 | 0.00 | 0.00 | 32.90 | 1.40 |
5070 | 6504 | 6.659242 | ACATCATCTGTTTTTCGTCCCTATTT | 59.341 | 34.615 | 0.00 | 0.00 | 32.90 | 1.40 |
5071 | 6505 | 6.180472 | ACATCATCTGTTTTTCGTCCCTATT | 58.820 | 36.000 | 0.00 | 0.00 | 32.90 | 1.73 |
5072 | 6506 | 5.745227 | ACATCATCTGTTTTTCGTCCCTAT | 58.255 | 37.500 | 0.00 | 0.00 | 32.90 | 2.57 |
5073 | 6507 | 5.160607 | ACATCATCTGTTTTTCGTCCCTA | 57.839 | 39.130 | 0.00 | 0.00 | 32.90 | 3.53 |
5074 | 6508 | 4.003648 | GACATCATCTGTTTTTCGTCCCT | 58.996 | 43.478 | 0.00 | 0.00 | 38.54 | 4.20 |
5075 | 6509 | 3.751175 | TGACATCATCTGTTTTTCGTCCC | 59.249 | 43.478 | 0.00 | 0.00 | 38.54 | 4.46 |
5076 | 6510 | 4.670221 | GCTGACATCATCTGTTTTTCGTCC | 60.670 | 45.833 | 0.00 | 0.00 | 38.54 | 4.79 |
5077 | 6511 | 4.398247 | GCTGACATCATCTGTTTTTCGTC | 58.602 | 43.478 | 0.00 | 0.00 | 38.54 | 4.20 |
5078 | 6512 | 3.120546 | CGCTGACATCATCTGTTTTTCGT | 60.121 | 43.478 | 0.00 | 0.00 | 38.54 | 3.85 |
5079 | 6513 | 3.410850 | CGCTGACATCATCTGTTTTTCG | 58.589 | 45.455 | 0.00 | 0.00 | 38.54 | 3.46 |
5080 | 6514 | 3.436704 | TCCGCTGACATCATCTGTTTTTC | 59.563 | 43.478 | 0.00 | 0.00 | 38.54 | 2.29 |
5081 | 6515 | 3.411446 | TCCGCTGACATCATCTGTTTTT | 58.589 | 40.909 | 0.00 | 0.00 | 38.54 | 1.94 |
5082 | 6516 | 3.057969 | TCCGCTGACATCATCTGTTTT | 57.942 | 42.857 | 0.00 | 0.00 | 38.54 | 2.43 |
5083 | 6517 | 2.768253 | TCCGCTGACATCATCTGTTT | 57.232 | 45.000 | 0.00 | 0.00 | 38.54 | 2.83 |
5084 | 6518 | 2.768253 | TTCCGCTGACATCATCTGTT | 57.232 | 45.000 | 0.00 | 0.00 | 38.54 | 3.16 |
5085 | 6519 | 2.768253 | TTTCCGCTGACATCATCTGT | 57.232 | 45.000 | 0.00 | 0.00 | 42.15 | 3.41 |
5086 | 6520 | 3.464907 | AGATTTCCGCTGACATCATCTG | 58.535 | 45.455 | 6.98 | 0.00 | 31.38 | 2.90 |
5087 | 6521 | 3.834489 | AGATTTCCGCTGACATCATCT | 57.166 | 42.857 | 6.98 | 0.00 | 31.38 | 2.90 |
5088 | 6522 | 4.889832 | AAAGATTTCCGCTGACATCATC | 57.110 | 40.909 | 6.98 | 0.00 | 31.38 | 2.92 |
5089 | 6523 | 4.142315 | CCAAAAGATTTCCGCTGACATCAT | 60.142 | 41.667 | 6.98 | 0.00 | 31.38 | 2.45 |
5090 | 6524 | 3.191162 | CCAAAAGATTTCCGCTGACATCA | 59.809 | 43.478 | 6.98 | 0.00 | 31.38 | 3.07 |
5091 | 6525 | 3.428045 | CCCAAAAGATTTCCGCTGACATC | 60.428 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
5092 | 6526 | 2.493278 | CCCAAAAGATTTCCGCTGACAT | 59.507 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
5093 | 6527 | 1.885887 | CCCAAAAGATTTCCGCTGACA | 59.114 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
5094 | 6528 | 1.886542 | ACCCAAAAGATTTCCGCTGAC | 59.113 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
5095 | 6529 | 2.286365 | ACCCAAAAGATTTCCGCTGA | 57.714 | 45.000 | 0.00 | 0.00 | 0.00 | 4.26 |
5096 | 6530 | 3.385193 | AAACCCAAAAGATTTCCGCTG | 57.615 | 42.857 | 0.00 | 0.00 | 0.00 | 5.18 |
5097 | 6531 | 3.386402 | TGAAAACCCAAAAGATTTCCGCT | 59.614 | 39.130 | 0.00 | 0.00 | 32.21 | 5.52 |
5098 | 6532 | 3.723260 | TGAAAACCCAAAAGATTTCCGC | 58.277 | 40.909 | 0.00 | 0.00 | 32.21 | 5.54 |
5099 | 6533 | 5.815222 | AGTTTGAAAACCCAAAAGATTTCCG | 59.185 | 36.000 | 2.34 | 0.00 | 39.71 | 4.30 |
5100 | 6534 | 7.624360 | AAGTTTGAAAACCCAAAAGATTTCC | 57.376 | 32.000 | 2.34 | 0.00 | 39.71 | 3.13 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.