Multiple sequence alignment - TraesCS5A01G356600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G356600 chr5A 100.000 3293 0 0 1 3293 558972593 558969301 0.000000e+00 6082.0
1 TraesCS5A01G356600 chr5A 88.045 987 109 7 1558 2543 455539821 455538843 0.000000e+00 1160.0
2 TraesCS5A01G356600 chr5A 85.900 1078 115 14 481 1555 455549545 455548502 0.000000e+00 1114.0
3 TraesCS5A01G356600 chr5A 98.305 59 0 1 114 171 55094571 55094513 5.810000e-18 102.0
4 TraesCS5A01G356600 chr2A 96.414 2203 75 2 345 2543 694812383 694814585 0.000000e+00 3627.0
5 TraesCS5A01G356600 chr2A 86.762 1541 179 15 350 1871 19485006 19486540 0.000000e+00 1692.0
6 TraesCS5A01G356600 chr2A 85.047 107 15 1 2684 2789 482369992 482370098 1.250000e-19 108.0
7 TraesCS5A01G356600 chr2A 81.818 110 17 2 3168 3275 50059047 50059155 4.530000e-14 89.8
8 TraesCS5A01G356600 chr1A 91.222 2210 174 8 342 2543 3614158 3611961 0.000000e+00 2988.0
9 TraesCS5A01G356600 chr1A 90.642 1432 115 3 1113 2543 496055007 496056420 0.000000e+00 1884.0
10 TraesCS5A01G356600 chr1A 88.448 1463 159 8 1083 2542 552388693 552390148 0.000000e+00 1757.0
11 TraesCS5A01G356600 chr1A 94.717 265 14 0 2790 3054 538889575 538889839 2.360000e-111 412.0
12 TraesCS5A01G356600 chr7A 89.691 2202 214 8 367 2559 672860783 672862980 0.000000e+00 2796.0
13 TraesCS5A01G356600 chr7A 97.901 1048 21 1 1497 2543 162923937 162922890 0.000000e+00 1812.0
14 TraesCS5A01G356600 chr7A 95.402 261 12 0 2791 3051 730827242 730826982 1.830000e-112 416.0
15 TraesCS5A01G356600 chr7A 94.424 269 14 1 2788 3055 672041115 672041383 2.360000e-111 412.0
16 TraesCS5A01G356600 chr7A 91.367 139 10 1 3138 3274 585359754 585359892 4.340000e-44 189.0
17 TraesCS5A01G356600 chr7A 84.071 113 17 1 2674 2785 397766511 397766623 1.250000e-19 108.0
18 TraesCS5A01G356600 chr7A 84.762 105 15 1 2684 2787 453848001 453847897 1.620000e-18 104.0
19 TraesCS5A01G356600 chr4A 95.518 1651 71 1 342 1989 4875252 4873602 0.000000e+00 2636.0
20 TraesCS5A01G356600 chr4A 95.090 611 27 3 1936 2543 4873607 4872997 0.000000e+00 959.0
21 TraesCS5A01G356600 chr4A 95.094 265 13 0 2791 3055 73544934 73545198 5.080000e-113 418.0
22 TraesCS5A01G356600 chr5D 86.246 2094 213 35 481 2543 354545000 354542951 0.000000e+00 2202.0
23 TraesCS5A01G356600 chr5D 94.915 59 2 1 113 170 421382899 421382957 1.260000e-14 91.6
24 TraesCS5A01G356600 chr6B 94.051 1059 38 2 1510 2543 120134618 120135676 0.000000e+00 1583.0
25 TraesCS5A01G356600 chr6B 97.917 192 3 1 342 533 120134431 120134621 6.810000e-87 331.0
26 TraesCS5A01G356600 chr6B 92.982 114 7 1 3169 3281 404984675 404984562 7.310000e-37 165.0
27 TraesCS5A01G356600 chr3D 85.333 1425 148 25 1152 2549 388344217 388345607 0.000000e+00 1417.0
28 TraesCS5A01G356600 chr3D 88.958 643 64 6 344 981 388341759 388342399 0.000000e+00 787.0
29 TraesCS5A01G356600 chr3B 79.477 1491 230 41 1070 2543 789053235 789051804 0.000000e+00 989.0
30 TraesCS5A01G356600 chr3B 96.491 57 2 0 114 170 16439176 16439120 9.730000e-16 95.3
31 TraesCS5A01G356600 chr3B 93.651 63 1 3 114 173 177490644 177490706 1.260000e-14 91.6
32 TraesCS5A01G356600 chr1B 91.206 398 35 0 1268 1665 651432869 651433266 2.890000e-150 542.0
33 TraesCS5A01G356600 chr1B 85.849 106 12 2 2684 2787 336935628 336935524 3.470000e-20 110.0
34 TraesCS5A01G356600 chr1B 85.849 106 12 2 2684 2787 336963432 336963328 3.470000e-20 110.0
35 TraesCS5A01G356600 chr3A 96.183 262 10 0 2791 3052 399898176 399898437 2.350000e-116 429.0
36 TraesCS5A01G356600 chr3A 94.757 267 12 2 2788 3054 13847792 13847528 6.570000e-112 414.0
37 TraesCS5A01G356600 chr3A 84.762 105 14 2 2684 2787 276166538 276166435 1.620000e-18 104.0
38 TraesCS5A01G356600 chr3A 84.762 105 15 1 2684 2787 489240049 489239945 1.620000e-18 104.0
39 TraesCS5A01G356600 chr6A 95.402 261 12 0 2791 3051 614646501 614646761 1.830000e-112 416.0
40 TraesCS5A01G356600 chr6A 94.118 272 16 0 2783 3054 135425229 135424958 6.570000e-112 414.0
41 TraesCS5A01G356600 chr6A 91.205 307 21 6 2788 3091 1971838 1972141 2.360000e-111 412.0
42 TraesCS5A01G356600 chr6D 87.500 104 12 1 2684 2786 279278553 279278656 5.770000e-23 119.0
43 TraesCS5A01G356600 chr6D 98.246 57 1 0 114 170 448226475 448226419 2.090000e-17 100.0
44 TraesCS5A01G356600 chr6D 96.552 58 1 1 114 170 48344 48401 9.730000e-16 95.3
45 TraesCS5A01G356600 chr6D 94.737 57 3 0 114 170 380144344 380144400 4.530000e-14 89.8
46 TraesCS5A01G356600 chr5B 84.762 105 15 1 2684 2787 709832369 709832473 1.620000e-18 104.0
47 TraesCS5A01G356600 chr4B 98.246 57 1 0 114 170 658022139 658022083 2.090000e-17 100.0
48 TraesCS5A01G356600 chr7D 96.667 60 1 1 113 171 600263899 600263958 7.520000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G356600 chr5A 558969301 558972593 3292 True 6082.0 6082 100.0000 1 3293 1 chr5A.!!$R4 3292
1 TraesCS5A01G356600 chr5A 455538843 455539821 978 True 1160.0 1160 88.0450 1558 2543 1 chr5A.!!$R2 985
2 TraesCS5A01G356600 chr5A 455548502 455549545 1043 True 1114.0 1114 85.9000 481 1555 1 chr5A.!!$R3 1074
3 TraesCS5A01G356600 chr2A 694812383 694814585 2202 False 3627.0 3627 96.4140 345 2543 1 chr2A.!!$F4 2198
4 TraesCS5A01G356600 chr2A 19485006 19486540 1534 False 1692.0 1692 86.7620 350 1871 1 chr2A.!!$F1 1521
5 TraesCS5A01G356600 chr1A 3611961 3614158 2197 True 2988.0 2988 91.2220 342 2543 1 chr1A.!!$R1 2201
6 TraesCS5A01G356600 chr1A 496055007 496056420 1413 False 1884.0 1884 90.6420 1113 2543 1 chr1A.!!$F1 1430
7 TraesCS5A01G356600 chr1A 552388693 552390148 1455 False 1757.0 1757 88.4480 1083 2542 1 chr1A.!!$F3 1459
8 TraesCS5A01G356600 chr7A 672860783 672862980 2197 False 2796.0 2796 89.6910 367 2559 1 chr7A.!!$F4 2192
9 TraesCS5A01G356600 chr7A 162922890 162923937 1047 True 1812.0 1812 97.9010 1497 2543 1 chr7A.!!$R1 1046
10 TraesCS5A01G356600 chr4A 4872997 4875252 2255 True 1797.5 2636 95.3040 342 2543 2 chr4A.!!$R1 2201
11 TraesCS5A01G356600 chr5D 354542951 354545000 2049 True 2202.0 2202 86.2460 481 2543 1 chr5D.!!$R1 2062
12 TraesCS5A01G356600 chr6B 120134431 120135676 1245 False 957.0 1583 95.9840 342 2543 2 chr6B.!!$F1 2201
13 TraesCS5A01G356600 chr3D 388341759 388345607 3848 False 1102.0 1417 87.1455 344 2549 2 chr3D.!!$F1 2205
14 TraesCS5A01G356600 chr3B 789051804 789053235 1431 True 989.0 989 79.4770 1070 2543 1 chr3B.!!$R2 1473

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
19 20 0.175760 GCAGAAGTAGCCACCATCGA 59.824 55.0 0.00 0.00 0.0 3.59 F
1552 3315 0.727398 GCAAGGCTTGATGGTACGTC 59.273 55.0 30.45 5.71 0.0 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1555 3318 0.606673 GCCCGCTCCAGAAAACTCTT 60.607 55.0 0.0 0.0 0.00 2.85 R
3136 5062 0.040204 AGGGATTCCAAACAGGGCTG 59.960 55.0 4.8 0.0 38.24 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.682893 GCAGAAGTAGCCACCATCG 58.317 57.895 0.00 0.00 0.00 3.84
19 20 0.175760 GCAGAAGTAGCCACCATCGA 59.824 55.000 0.00 0.00 0.00 3.59
20 21 1.405526 GCAGAAGTAGCCACCATCGAA 60.406 52.381 0.00 0.00 0.00 3.71
21 22 2.935238 GCAGAAGTAGCCACCATCGAAA 60.935 50.000 0.00 0.00 0.00 3.46
22 23 2.932614 CAGAAGTAGCCACCATCGAAAG 59.067 50.000 0.00 0.00 0.00 2.62
24 25 2.674796 AGTAGCCACCATCGAAAGAC 57.325 50.000 0.00 0.00 46.97 3.01
25 26 1.135083 AGTAGCCACCATCGAAAGACG 60.135 52.381 0.00 0.00 46.97 4.18
102 103 8.803397 ACTTCCTAAGTTTGACCAATATTACC 57.197 34.615 0.00 0.00 39.04 2.85
103 104 8.387813 ACTTCCTAAGTTTGACCAATATTACCA 58.612 33.333 0.00 0.00 39.04 3.25
104 105 9.238368 CTTCCTAAGTTTGACCAATATTACCAA 57.762 33.333 0.00 0.00 0.00 3.67
105 106 8.570068 TCCTAAGTTTGACCAATATTACCAAC 57.430 34.615 0.00 0.00 0.00 3.77
106 107 8.164733 TCCTAAGTTTGACCAATATTACCAACA 58.835 33.333 0.00 0.00 0.00 3.33
107 108 8.966868 CCTAAGTTTGACCAATATTACCAACAT 58.033 33.333 0.00 0.00 0.00 2.71
110 111 8.415950 AGTTTGACCAATATTACCAACATTCA 57.584 30.769 0.00 0.00 0.00 2.57
111 112 9.034800 AGTTTGACCAATATTACCAACATTCAT 57.965 29.630 0.00 0.00 0.00 2.57
125 126 8.396272 ACCAACATTCATAATAGCTTGTATCC 57.604 34.615 0.00 0.00 0.00 2.59
126 127 7.448469 ACCAACATTCATAATAGCTTGTATCCC 59.552 37.037 0.00 0.00 0.00 3.85
127 128 7.667219 CCAACATTCATAATAGCTTGTATCCCT 59.333 37.037 0.00 0.00 0.00 4.20
128 129 9.725019 CAACATTCATAATAGCTTGTATCCCTA 57.275 33.333 0.00 0.00 0.00 3.53
129 130 9.726438 AACATTCATAATAGCTTGTATCCCTAC 57.274 33.333 0.00 0.00 0.00 3.18
130 131 8.880244 ACATTCATAATAGCTTGTATCCCTACA 58.120 33.333 0.00 0.00 36.06 2.74
131 132 9.725019 CATTCATAATAGCTTGTATCCCTACAA 57.275 33.333 0.00 0.00 43.80 2.41
133 134 9.555727 TTCATAATAGCTTGTATCCCTACAAAC 57.444 33.333 0.00 0.00 44.95 2.93
134 135 8.710239 TCATAATAGCTTGTATCCCTACAAACA 58.290 33.333 0.00 0.00 44.95 2.83
135 136 9.507329 CATAATAGCTTGTATCCCTACAAACAT 57.493 33.333 0.00 0.00 44.95 2.71
137 138 7.807977 ATAGCTTGTATCCCTACAAACATTG 57.192 36.000 0.00 0.00 44.95 2.82
138 139 5.570320 AGCTTGTATCCCTACAAACATTGT 58.430 37.500 0.99 0.99 44.95 2.71
139 140 6.010219 AGCTTGTATCCCTACAAACATTGTT 58.990 36.000 0.54 0.00 44.95 2.83
140 141 6.493458 AGCTTGTATCCCTACAAACATTGTTT 59.507 34.615 8.97 8.97 44.95 2.83
141 142 7.668052 AGCTTGTATCCCTACAAACATTGTTTA 59.332 33.333 14.13 0.00 44.95 2.01
142 143 8.301002 GCTTGTATCCCTACAAACATTGTTTAA 58.699 33.333 14.13 5.57 44.95 1.52
149 150 9.699703 TCCCTACAAACATTGTTTAAATAAAGC 57.300 29.630 14.13 0.00 42.22 3.51
150 151 9.705290 CCCTACAAACATTGTTTAAATAAAGCT 57.295 29.630 14.13 0.00 42.22 3.74
190 191 6.619801 AAAGGAGATATTACCAACATTCGC 57.380 37.500 0.00 0.00 0.00 4.70
191 192 5.290493 AGGAGATATTACCAACATTCGCA 57.710 39.130 0.00 0.00 0.00 5.10
192 193 5.680619 AGGAGATATTACCAACATTCGCAA 58.319 37.500 0.00 0.00 0.00 4.85
193 194 6.299141 AGGAGATATTACCAACATTCGCAAT 58.701 36.000 0.00 0.00 0.00 3.56
194 195 7.450074 AGGAGATATTACCAACATTCGCAATA 58.550 34.615 0.00 0.00 0.00 1.90
195 196 7.387948 AGGAGATATTACCAACATTCGCAATAC 59.612 37.037 0.00 0.00 0.00 1.89
196 197 7.172532 GGAGATATTACCAACATTCGCAATACA 59.827 37.037 0.00 0.00 0.00 2.29
197 198 7.861630 AGATATTACCAACATTCGCAATACAC 58.138 34.615 0.00 0.00 0.00 2.90
198 199 5.888691 ATTACCAACATTCGCAATACACA 57.111 34.783 0.00 0.00 0.00 3.72
199 200 5.690997 TTACCAACATTCGCAATACACAA 57.309 34.783 0.00 0.00 0.00 3.33
200 201 4.782019 ACCAACATTCGCAATACACAAT 57.218 36.364 0.00 0.00 0.00 2.71
201 202 5.888691 ACCAACATTCGCAATACACAATA 57.111 34.783 0.00 0.00 0.00 1.90
202 203 6.260870 ACCAACATTCGCAATACACAATAA 57.739 33.333 0.00 0.00 0.00 1.40
203 204 6.682746 ACCAACATTCGCAATACACAATAAA 58.317 32.000 0.00 0.00 0.00 1.40
204 205 7.319646 ACCAACATTCGCAATACACAATAAAT 58.680 30.769 0.00 0.00 0.00 1.40
205 206 8.462811 ACCAACATTCGCAATACACAATAAATA 58.537 29.630 0.00 0.00 0.00 1.40
206 207 9.462174 CCAACATTCGCAATACACAATAAATAT 57.538 29.630 0.00 0.00 0.00 1.28
234 235 9.763837 ATGTATTTGGATCATCATGGAATACAT 57.236 29.630 14.83 14.83 41.06 2.29
235 236 9.590828 TGTATTTGGATCATCATGGAATACATT 57.409 29.630 0.00 0.00 37.84 2.71
238 239 9.991906 ATTTGGATCATCATGGAATACATTTTC 57.008 29.630 0.00 0.00 37.84 2.29
239 240 8.536340 TTGGATCATCATGGAATACATTTTCA 57.464 30.769 0.00 0.00 37.84 2.69
240 241 7.944061 TGGATCATCATGGAATACATTTTCAC 58.056 34.615 0.00 0.00 37.84 3.18
241 242 7.781219 TGGATCATCATGGAATACATTTTCACT 59.219 33.333 0.00 0.00 37.84 3.41
242 243 8.080417 GGATCATCATGGAATACATTTTCACTG 58.920 37.037 0.00 0.00 37.84 3.66
243 244 7.943079 TCATCATGGAATACATTTTCACTGT 57.057 32.000 0.00 0.00 37.84 3.55
244 245 9.631257 ATCATCATGGAATACATTTTCACTGTA 57.369 29.630 0.00 0.00 37.84 2.74
245 246 9.631257 TCATCATGGAATACATTTTCACTGTAT 57.369 29.630 0.00 0.00 40.62 2.29
316 317 9.734620 TCAAACTTCACAAAATTTGACTATCTG 57.265 29.630 13.19 0.00 36.42 2.90
317 318 9.520204 CAAACTTCACAAAATTTGACTATCTGT 57.480 29.630 13.19 0.00 34.62 3.41
320 321 9.736023 ACTTCACAAAATTTGACTATCTGTTTC 57.264 29.630 13.19 0.00 0.00 2.78
321 322 9.734620 CTTCACAAAATTTGACTATCTGTTTCA 57.265 29.630 13.19 0.00 0.00 2.69
333 334 9.890629 TGACTATCTGTTTCAAAATATAGTGCT 57.109 29.630 0.00 0.00 31.95 4.40
337 338 7.994425 TCTGTTTCAAAATATAGTGCTTCCA 57.006 32.000 0.00 0.00 0.00 3.53
338 339 8.044060 TCTGTTTCAAAATATAGTGCTTCCAG 57.956 34.615 0.00 0.00 0.00 3.86
339 340 7.665559 TCTGTTTCAAAATATAGTGCTTCCAGT 59.334 33.333 0.00 0.00 0.00 4.00
340 341 8.177119 TGTTTCAAAATATAGTGCTTCCAGTT 57.823 30.769 0.00 0.00 0.00 3.16
696 707 3.710722 CAAGCTGGCGACCTCCCT 61.711 66.667 0.00 0.00 0.00 4.20
737 748 3.344137 ATGCTCGGCCCGATTTGGT 62.344 57.895 6.16 0.00 34.61 3.67
777 788 2.348888 CCGGCTCGTCCTAGTTGGT 61.349 63.158 0.00 0.00 37.07 3.67
905 916 3.389329 GTGGATGTAGATGTGGAGATGGT 59.611 47.826 0.00 0.00 0.00 3.55
940 951 2.716017 GCCTCGGCTAGTGCAGACT 61.716 63.158 0.00 0.00 38.41 3.24
1045 1066 3.138798 GGACTCCGTCGGCTGCTA 61.139 66.667 6.34 0.00 32.65 3.49
1165 2922 4.082523 CGTCATCACCGGCCCTGT 62.083 66.667 0.00 0.00 0.00 4.00
1327 3084 0.807667 CAATCCTTGGCGTCCTCTCG 60.808 60.000 0.00 0.00 0.00 4.04
1345 3102 2.514592 GCTCGCTGGCATGCCTTA 60.515 61.111 35.53 17.30 36.94 2.69
1427 3190 1.205893 GTTCGTGCTTCCCTCTGAGAT 59.794 52.381 6.17 0.00 0.00 2.75
1552 3315 0.727398 GCAAGGCTTGATGGTACGTC 59.273 55.000 30.45 5.71 0.00 4.34
1555 3318 3.857052 CAAGGCTTGATGGTACGTCTTA 58.143 45.455 22.64 0.00 0.00 2.10
2024 3912 0.249398 GAGGCGGTCAGTATGTTGGT 59.751 55.000 0.00 0.00 37.40 3.67
2038 3926 1.355381 TGTTGGTGCCTGATCCTTCAT 59.645 47.619 0.00 0.00 0.00 2.57
2039 3927 1.747355 GTTGGTGCCTGATCCTTCATG 59.253 52.381 0.00 0.00 0.00 3.07
2083 3971 1.601419 GGATCGTGGAGGTTCCGACA 61.601 60.000 0.00 0.00 40.17 4.35
2110 3998 4.529219 CCGGCTCGCATGTGGCTA 62.529 66.667 16.02 0.00 41.67 3.93
2238 4129 0.179089 CGATTGTGGAGGAGGCTCTG 60.179 60.000 15.23 0.00 0.00 3.35
2265 4156 2.393271 ATGCAAAGAAGAGTAGCGCT 57.607 45.000 17.26 17.26 0.00 5.92
2480 4402 3.322541 TGGTGAGTCTGTATCGGTTTTCA 59.677 43.478 0.00 0.00 0.00 2.69
2589 4515 2.096013 GGACAAACCTAAGATGCGAAGC 59.904 50.000 0.00 0.00 45.74 3.86
2590 4516 5.025151 GGACAAACCTAAGATGCGAAGCC 62.025 52.174 0.00 0.00 45.18 4.35
2607 4533 6.024542 CGAAGCCAAAAGAAACAGAAAAAG 57.975 37.500 0.00 0.00 0.00 2.27
2608 4534 5.576774 CGAAGCCAAAAGAAACAGAAAAAGT 59.423 36.000 0.00 0.00 0.00 2.66
2609 4535 6.750039 CGAAGCCAAAAGAAACAGAAAAAGTA 59.250 34.615 0.00 0.00 0.00 2.24
2610 4536 7.253651 CGAAGCCAAAAGAAACAGAAAAAGTAC 60.254 37.037 0.00 0.00 0.00 2.73
2611 4537 6.930731 AGCCAAAAGAAACAGAAAAAGTACA 58.069 32.000 0.00 0.00 0.00 2.90
2612 4538 7.382898 AGCCAAAAGAAACAGAAAAAGTACAA 58.617 30.769 0.00 0.00 0.00 2.41
2613 4539 7.875554 AGCCAAAAGAAACAGAAAAAGTACAAA 59.124 29.630 0.00 0.00 0.00 2.83
2614 4540 8.499967 GCCAAAAGAAACAGAAAAAGTACAAAA 58.500 29.630 0.00 0.00 0.00 2.44
2615 4541 9.805966 CCAAAAGAAACAGAAAAAGTACAAAAC 57.194 29.630 0.00 0.00 0.00 2.43
2618 4544 9.974980 AAAGAAACAGAAAAAGTACAAAACAGA 57.025 25.926 0.00 0.00 0.00 3.41
2619 4545 9.626045 AAGAAACAGAAAAAGTACAAAACAGAG 57.374 29.630 0.00 0.00 0.00 3.35
2620 4546 7.755373 AGAAACAGAAAAAGTACAAAACAGAGC 59.245 33.333 0.00 0.00 0.00 4.09
2621 4547 6.509418 ACAGAAAAAGTACAAAACAGAGCA 57.491 33.333 0.00 0.00 0.00 4.26
2622 4548 7.100458 ACAGAAAAAGTACAAAACAGAGCAT 57.900 32.000 0.00 0.00 0.00 3.79
2623 4549 7.547227 ACAGAAAAAGTACAAAACAGAGCATT 58.453 30.769 0.00 0.00 0.00 3.56
2624 4550 8.034804 ACAGAAAAAGTACAAAACAGAGCATTT 58.965 29.630 0.00 0.00 0.00 2.32
2625 4551 8.534778 CAGAAAAAGTACAAAACAGAGCATTTC 58.465 33.333 0.00 0.00 0.00 2.17
2626 4552 8.470002 AGAAAAAGTACAAAACAGAGCATTTCT 58.530 29.630 0.00 0.00 36.25 2.52
2627 4553 8.634475 AAAAAGTACAAAACAGAGCATTTCTC 57.366 30.769 0.00 0.00 42.21 2.87
2628 4554 5.948992 AGTACAAAACAGAGCATTTCTCC 57.051 39.130 0.00 0.00 42.90 3.71
2629 4555 4.762251 AGTACAAAACAGAGCATTTCTCCC 59.238 41.667 0.00 0.00 42.90 4.30
2630 4556 2.893489 ACAAAACAGAGCATTTCTCCCC 59.107 45.455 0.00 0.00 42.90 4.81
2631 4557 3.160269 CAAAACAGAGCATTTCTCCCCT 58.840 45.455 0.00 0.00 42.90 4.79
2632 4558 2.503895 AACAGAGCATTTCTCCCCTG 57.496 50.000 0.00 0.00 42.90 4.45
2633 4559 1.366319 ACAGAGCATTTCTCCCCTGT 58.634 50.000 0.00 0.00 42.90 4.00
2634 4560 1.280421 ACAGAGCATTTCTCCCCTGTC 59.720 52.381 0.00 0.00 42.90 3.51
2635 4561 0.539051 AGAGCATTTCTCCCCTGTCG 59.461 55.000 0.00 0.00 42.90 4.35
2636 4562 1.078143 AGCATTTCTCCCCTGTCGC 60.078 57.895 0.00 0.00 0.00 5.19
2637 4563 2.115291 GCATTTCTCCCCTGTCGCC 61.115 63.158 0.00 0.00 0.00 5.54
2638 4564 1.452108 CATTTCTCCCCTGTCGCCC 60.452 63.158 0.00 0.00 0.00 6.13
2639 4565 1.616628 ATTTCTCCCCTGTCGCCCT 60.617 57.895 0.00 0.00 0.00 5.19
2640 4566 0.326238 ATTTCTCCCCTGTCGCCCTA 60.326 55.000 0.00 0.00 0.00 3.53
2641 4567 0.326238 TTTCTCCCCTGTCGCCCTAT 60.326 55.000 0.00 0.00 0.00 2.57
2642 4568 1.048724 TTCTCCCCTGTCGCCCTATG 61.049 60.000 0.00 0.00 0.00 2.23
2643 4569 1.762460 CTCCCCTGTCGCCCTATGT 60.762 63.158 0.00 0.00 0.00 2.29
2644 4570 2.032860 CTCCCCTGTCGCCCTATGTG 62.033 65.000 0.00 0.00 0.00 3.21
2645 4571 2.203070 CCCTGTCGCCCTATGTGC 60.203 66.667 0.00 0.00 0.00 4.57
2646 4572 2.735772 CCCTGTCGCCCTATGTGCT 61.736 63.158 0.00 0.00 0.00 4.40
2647 4573 1.221840 CCTGTCGCCCTATGTGCTT 59.778 57.895 0.00 0.00 0.00 3.91
2648 4574 0.392998 CCTGTCGCCCTATGTGCTTT 60.393 55.000 0.00 0.00 0.00 3.51
2649 4575 1.453155 CTGTCGCCCTATGTGCTTTT 58.547 50.000 0.00 0.00 0.00 2.27
2650 4576 1.131126 CTGTCGCCCTATGTGCTTTTG 59.869 52.381 0.00 0.00 0.00 2.44
2651 4577 1.165270 GTCGCCCTATGTGCTTTTGT 58.835 50.000 0.00 0.00 0.00 2.83
2652 4578 1.539827 GTCGCCCTATGTGCTTTTGTT 59.460 47.619 0.00 0.00 0.00 2.83
2653 4579 2.745281 GTCGCCCTATGTGCTTTTGTTA 59.255 45.455 0.00 0.00 0.00 2.41
2654 4580 3.377172 GTCGCCCTATGTGCTTTTGTTAT 59.623 43.478 0.00 0.00 0.00 1.89
2655 4581 4.573201 GTCGCCCTATGTGCTTTTGTTATA 59.427 41.667 0.00 0.00 0.00 0.98
2656 4582 4.814234 TCGCCCTATGTGCTTTTGTTATAG 59.186 41.667 0.00 0.00 0.00 1.31
2657 4583 4.024048 CGCCCTATGTGCTTTTGTTATAGG 60.024 45.833 0.00 0.00 39.89 2.57
2658 4584 4.261614 GCCCTATGTGCTTTTGTTATAGGC 60.262 45.833 0.00 0.00 39.21 3.93
2659 4585 5.133221 CCCTATGTGCTTTTGTTATAGGCT 58.867 41.667 0.00 0.00 39.21 4.58
2660 4586 5.239525 CCCTATGTGCTTTTGTTATAGGCTC 59.760 44.000 0.00 0.00 39.21 4.70
2661 4587 4.882671 ATGTGCTTTTGTTATAGGCTCG 57.117 40.909 0.00 0.00 0.00 5.03
2662 4588 3.670625 TGTGCTTTTGTTATAGGCTCGT 58.329 40.909 0.00 0.00 0.00 4.18
2663 4589 3.682858 TGTGCTTTTGTTATAGGCTCGTC 59.317 43.478 0.00 0.00 0.00 4.20
2664 4590 2.927477 TGCTTTTGTTATAGGCTCGTCG 59.073 45.455 0.00 0.00 0.00 5.12
2665 4591 2.285660 GCTTTTGTTATAGGCTCGTCGC 60.286 50.000 0.00 0.00 38.13 5.19
2666 4592 2.658373 TTTGTTATAGGCTCGTCGCA 57.342 45.000 0.00 0.00 41.67 5.10
2667 4593 2.658373 TTGTTATAGGCTCGTCGCAA 57.342 45.000 0.00 0.00 41.67 4.85
2668 4594 2.882927 TGTTATAGGCTCGTCGCAAT 57.117 45.000 0.00 0.00 41.67 3.56
2669 4595 2.469826 TGTTATAGGCTCGTCGCAATG 58.530 47.619 0.00 0.00 41.67 2.82
2670 4596 1.792949 GTTATAGGCTCGTCGCAATGG 59.207 52.381 0.00 0.00 41.67 3.16
2671 4597 1.324383 TATAGGCTCGTCGCAATGGA 58.676 50.000 0.00 0.00 41.67 3.41
2672 4598 0.464036 ATAGGCTCGTCGCAATGGAA 59.536 50.000 0.00 0.00 41.67 3.53
2673 4599 0.248012 TAGGCTCGTCGCAATGGAAA 59.752 50.000 0.00 0.00 41.67 3.13
2674 4600 1.021390 AGGCTCGTCGCAATGGAAAG 61.021 55.000 2.27 0.00 41.67 2.62
2675 4601 1.298859 GGCTCGTCGCAATGGAAAGT 61.299 55.000 2.27 0.00 41.67 2.66
2676 4602 1.355971 GCTCGTCGCAATGGAAAGTA 58.644 50.000 0.00 0.00 38.92 2.24
2677 4603 1.933853 GCTCGTCGCAATGGAAAGTAT 59.066 47.619 0.00 0.00 38.92 2.12
2678 4604 2.351726 GCTCGTCGCAATGGAAAGTATT 59.648 45.455 0.00 0.00 38.92 1.89
2679 4605 3.554324 GCTCGTCGCAATGGAAAGTATTA 59.446 43.478 0.00 0.00 38.92 0.98
2680 4606 4.211374 GCTCGTCGCAATGGAAAGTATTAT 59.789 41.667 0.00 0.00 38.92 1.28
2681 4607 5.404366 GCTCGTCGCAATGGAAAGTATTATA 59.596 40.000 0.00 0.00 38.92 0.98
2682 4608 6.615839 GCTCGTCGCAATGGAAAGTATTATAC 60.616 42.308 0.00 0.00 38.92 1.47
2683 4609 6.274579 TCGTCGCAATGGAAAGTATTATACA 58.725 36.000 5.11 0.00 0.00 2.29
2684 4610 6.926826 TCGTCGCAATGGAAAGTATTATACAT 59.073 34.615 5.11 0.00 0.00 2.29
2685 4611 8.083462 TCGTCGCAATGGAAAGTATTATACATA 58.917 33.333 5.11 0.00 0.00 2.29
2686 4612 8.869897 CGTCGCAATGGAAAGTATTATACATAT 58.130 33.333 5.11 0.00 0.00 1.78
2687 4613 9.973246 GTCGCAATGGAAAGTATTATACATATG 57.027 33.333 5.11 0.00 0.00 1.78
2688 4614 9.936759 TCGCAATGGAAAGTATTATACATATGA 57.063 29.630 10.38 0.00 0.00 2.15
2706 4632 8.379428 ACATATGATACTACCTCCATAATGCA 57.621 34.615 10.38 0.00 0.00 3.96
2707 4633 8.996655 ACATATGATACTACCTCCATAATGCAT 58.003 33.333 10.38 0.00 0.00 3.96
2710 4636 8.615360 ATGATACTACCTCCATAATGCATAGT 57.385 34.615 0.00 0.00 0.00 2.12
2711 4637 9.715119 ATGATACTACCTCCATAATGCATAGTA 57.285 33.333 0.00 0.81 0.00 1.82
2712 4638 9.715119 TGATACTACCTCCATAATGCATAGTAT 57.285 33.333 11.08 11.08 37.18 2.12
2714 4640 9.715119 ATACTACCTCCATAATGCATAGTATCA 57.285 33.333 0.00 0.00 31.76 2.15
2715 4641 8.615360 ACTACCTCCATAATGCATAGTATCAT 57.385 34.615 0.00 0.00 0.00 2.45
2716 4642 9.715119 ACTACCTCCATAATGCATAGTATCATA 57.285 33.333 0.00 0.00 0.00 2.15
2719 4645 9.444668 ACCTCCATAATGCATAGTATCATATCT 57.555 33.333 0.00 0.00 0.00 1.98
2723 4649 9.842775 CCATAATGCATAGTATCATATCTTGGT 57.157 33.333 0.00 0.00 0.00 3.67
2766 4692 9.884636 TTATTGTTATGCAAGACACATACTAGT 57.115 29.630 0.00 0.00 40.86 2.57
2768 4694 8.697846 TTGTTATGCAAGACACATACTAGTAC 57.302 34.615 4.31 0.00 32.52 2.73
2769 4695 7.832769 TGTTATGCAAGACACATACTAGTACA 58.167 34.615 4.31 0.00 29.89 2.90
2770 4696 8.474831 TGTTATGCAAGACACATACTAGTACAT 58.525 33.333 4.31 3.69 29.89 2.29
2771 4697 8.969267 GTTATGCAAGACACATACTAGTACATC 58.031 37.037 4.31 0.95 29.89 3.06
2772 4698 6.524101 TGCAAGACACATACTAGTACATCA 57.476 37.500 4.31 0.00 0.00 3.07
2773 4699 7.112452 TGCAAGACACATACTAGTACATCAT 57.888 36.000 4.31 0.00 0.00 2.45
2774 4700 7.555965 TGCAAGACACATACTAGTACATCATT 58.444 34.615 4.31 0.00 0.00 2.57
2775 4701 8.040727 TGCAAGACACATACTAGTACATCATTT 58.959 33.333 4.31 0.00 0.00 2.32
2776 4702 9.529325 GCAAGACACATACTAGTACATCATTTA 57.471 33.333 4.31 0.00 0.00 1.40
2800 4726 6.998968 ATAAGATACGTAATACTCCCTCCG 57.001 41.667 0.00 0.00 0.00 4.63
2801 4727 4.363991 AGATACGTAATACTCCCTCCGT 57.636 45.455 0.00 0.00 0.00 4.69
2802 4728 4.723309 AGATACGTAATACTCCCTCCGTT 58.277 43.478 0.00 0.00 0.00 4.44
2803 4729 5.136105 AGATACGTAATACTCCCTCCGTTT 58.864 41.667 0.00 0.00 0.00 3.60
2804 4730 5.595952 AGATACGTAATACTCCCTCCGTTTT 59.404 40.000 0.00 0.00 0.00 2.43
2805 4731 4.541973 ACGTAATACTCCCTCCGTTTTT 57.458 40.909 0.00 0.00 0.00 1.94
2806 4732 5.659440 ACGTAATACTCCCTCCGTTTTTA 57.341 39.130 0.00 0.00 0.00 1.52
2807 4733 6.225981 ACGTAATACTCCCTCCGTTTTTAT 57.774 37.500 0.00 0.00 0.00 1.40
2808 4734 6.643388 ACGTAATACTCCCTCCGTTTTTATT 58.357 36.000 0.00 0.00 0.00 1.40
2809 4735 7.105588 ACGTAATACTCCCTCCGTTTTTATTT 58.894 34.615 0.00 0.00 0.00 1.40
2810 4736 8.257306 ACGTAATACTCCCTCCGTTTTTATTTA 58.743 33.333 0.00 0.00 0.00 1.40
2811 4737 8.758715 CGTAATACTCCCTCCGTTTTTATTTAG 58.241 37.037 0.00 0.00 0.00 1.85
2812 4738 9.605275 GTAATACTCCCTCCGTTTTTATTTAGT 57.395 33.333 0.00 0.00 0.00 2.24
2814 4740 8.728337 ATACTCCCTCCGTTTTTATTTAGTTC 57.272 34.615 0.00 0.00 0.00 3.01
2815 4741 5.640783 ACTCCCTCCGTTTTTATTTAGTTCG 59.359 40.000 0.00 0.00 0.00 3.95
2816 4742 4.392754 TCCCTCCGTTTTTATTTAGTTCGC 59.607 41.667 0.00 0.00 0.00 4.70
2817 4743 4.328667 CCTCCGTTTTTATTTAGTTCGCG 58.671 43.478 0.00 0.00 0.00 5.87
2818 4744 4.143052 CCTCCGTTTTTATTTAGTTCGCGT 60.143 41.667 5.77 0.00 0.00 6.01
2819 4745 5.062058 CCTCCGTTTTTATTTAGTTCGCGTA 59.938 40.000 5.77 0.00 0.00 4.42
2820 4746 6.237915 CCTCCGTTTTTATTTAGTTCGCGTAT 60.238 38.462 5.77 0.00 0.00 3.06
2821 4747 7.059448 TCCGTTTTTATTTAGTTCGCGTATT 57.941 32.000 5.77 0.00 0.00 1.89
2822 4748 8.179148 TCCGTTTTTATTTAGTTCGCGTATTA 57.821 30.769 5.77 0.00 0.00 0.98
2823 4749 8.320295 TCCGTTTTTATTTAGTTCGCGTATTAG 58.680 33.333 5.77 0.00 0.00 1.73
2824 4750 7.109259 CCGTTTTTATTTAGTTCGCGTATTAGC 59.891 37.037 5.77 0.00 0.00 3.09
2825 4751 7.842721 CGTTTTTATTTAGTTCGCGTATTAGCT 59.157 33.333 5.77 0.00 34.40 3.32
2826 4752 9.481800 GTTTTTATTTAGTTCGCGTATTAGCTT 57.518 29.630 5.77 0.00 34.40 3.74
2828 4754 9.480538 TTTTATTTAGTTCGCGTATTAGCTTTG 57.519 29.630 5.77 0.00 34.40 2.77
2829 4755 5.459110 TTTAGTTCGCGTATTAGCTTTGG 57.541 39.130 5.77 0.00 34.40 3.28
2830 4756 2.968675 AGTTCGCGTATTAGCTTTGGT 58.031 42.857 5.77 0.00 34.40 3.67
2831 4757 2.928116 AGTTCGCGTATTAGCTTTGGTC 59.072 45.455 5.77 0.00 34.40 4.02
2832 4758 2.658373 TCGCGTATTAGCTTTGGTCA 57.342 45.000 5.77 0.00 34.40 4.02
2833 4759 2.962125 TCGCGTATTAGCTTTGGTCAA 58.038 42.857 5.77 0.00 34.40 3.18
2834 4760 3.327626 TCGCGTATTAGCTTTGGTCAAA 58.672 40.909 5.77 0.00 34.40 2.69
2856 4782 7.755582 AAAGTCATGCTTTGTAAACTTTGAC 57.244 32.000 12.41 0.00 45.00 3.18
2857 4783 5.831997 AGTCATGCTTTGTAAACTTTGACC 58.168 37.500 0.00 0.00 34.27 4.02
2858 4784 5.359576 AGTCATGCTTTGTAAACTTTGACCA 59.640 36.000 0.00 0.00 34.27 4.02
2859 4785 6.039616 GTCATGCTTTGTAAACTTTGACCAA 58.960 36.000 0.00 0.00 0.00 3.67
2860 4786 6.701400 GTCATGCTTTGTAAACTTTGACCAAT 59.299 34.615 0.00 0.00 0.00 3.16
2861 4787 7.224557 GTCATGCTTTGTAAACTTTGACCAATT 59.775 33.333 0.00 0.00 0.00 2.32
2862 4788 7.768120 TCATGCTTTGTAAACTTTGACCAATTT 59.232 29.630 0.00 0.00 0.00 1.82
2863 4789 7.913674 TGCTTTGTAAACTTTGACCAATTTT 57.086 28.000 0.00 0.00 0.00 1.82
2864 4790 9.606631 ATGCTTTGTAAACTTTGACCAATTTTA 57.393 25.926 0.00 0.00 0.00 1.52
2865 4791 9.606631 TGCTTTGTAAACTTTGACCAATTTTAT 57.393 25.926 0.00 0.00 0.00 1.40
3011 4937 9.921637 TCAAACTTTACAAAATTTGACTTCAGT 57.078 25.926 13.19 4.26 36.42 3.41
3027 4953 7.462109 GACTTCAGTCAACTCTAATATGCTG 57.538 40.000 1.86 0.00 44.18 4.41
3028 4954 7.175347 ACTTCAGTCAACTCTAATATGCTGA 57.825 36.000 0.00 0.00 0.00 4.26
3029 4955 7.264221 ACTTCAGTCAACTCTAATATGCTGAG 58.736 38.462 0.00 0.00 32.75 3.35
3030 4956 6.782082 TCAGTCAACTCTAATATGCTGAGT 57.218 37.500 0.00 0.00 42.12 3.41
3031 4957 7.881775 TCAGTCAACTCTAATATGCTGAGTA 57.118 36.000 6.11 0.00 39.78 2.59
3032 4958 8.293699 TCAGTCAACTCTAATATGCTGAGTAA 57.706 34.615 6.11 0.00 39.78 2.24
3033 4959 8.749354 TCAGTCAACTCTAATATGCTGAGTAAA 58.251 33.333 6.11 0.00 39.78 2.01
3034 4960 9.539825 CAGTCAACTCTAATATGCTGAGTAAAT 57.460 33.333 6.11 0.00 39.78 1.40
3046 4972 7.681939 ATGCTGAGTAAATAAAAACGAAGGA 57.318 32.000 0.00 0.00 0.00 3.36
3047 4973 7.499321 TGCTGAGTAAATAAAAACGAAGGAA 57.501 32.000 0.00 0.00 0.00 3.36
3048 4974 7.581476 TGCTGAGTAAATAAAAACGAAGGAAG 58.419 34.615 0.00 0.00 0.00 3.46
3049 4975 7.227910 TGCTGAGTAAATAAAAACGAAGGAAGT 59.772 33.333 0.00 0.00 0.00 3.01
3050 4976 8.715088 GCTGAGTAAATAAAAACGAAGGAAGTA 58.285 33.333 0.00 0.00 0.00 2.24
3052 4978 9.768662 TGAGTAAATAAAAACGAAGGAAGTACT 57.231 29.630 0.00 0.00 0.00 2.73
3057 4983 9.993454 AAATAAAAACGAAGGAAGTACTAGACT 57.007 29.630 0.00 0.00 41.56 3.24
3060 4986 8.983307 AAAAACGAAGGAAGTACTAGACTATG 57.017 34.615 0.00 0.00 37.44 2.23
3061 4987 7.934855 AAACGAAGGAAGTACTAGACTATGA 57.065 36.000 0.00 0.00 37.44 2.15
3062 4988 8.522542 AAACGAAGGAAGTACTAGACTATGAT 57.477 34.615 0.00 0.00 37.44 2.45
3063 4989 9.624373 AAACGAAGGAAGTACTAGACTATGATA 57.376 33.333 0.00 0.00 37.44 2.15
3064 4990 8.606040 ACGAAGGAAGTACTAGACTATGATAC 57.394 38.462 0.00 0.00 37.44 2.24
3065 4991 8.431222 ACGAAGGAAGTACTAGACTATGATACT 58.569 37.037 0.00 0.00 37.44 2.12
3066 4992 8.928733 CGAAGGAAGTACTAGACTATGATACTC 58.071 40.741 0.00 0.00 37.44 2.59
3067 4993 9.781633 GAAGGAAGTACTAGACTATGATACTCA 57.218 37.037 0.00 0.00 37.44 3.41
3073 4999 9.953565 AGTACTAGACTATGATACTCAATCCTC 57.046 37.037 0.00 0.00 36.27 3.71
3074 5000 9.953565 GTACTAGACTATGATACTCAATCCTCT 57.046 37.037 0.00 0.00 33.22 3.69
3076 5002 8.890472 ACTAGACTATGATACTCAATCCTCTCT 58.110 37.037 0.00 0.00 33.22 3.10
3077 5003 9.739276 CTAGACTATGATACTCAATCCTCTCTT 57.261 37.037 0.00 0.00 33.22 2.85
3079 5005 9.432982 AGACTATGATACTCAATCCTCTCTTTT 57.567 33.333 0.00 0.00 33.22 2.27
3080 5006 9.691362 GACTATGATACTCAATCCTCTCTTTTC 57.309 37.037 0.00 0.00 33.22 2.29
3081 5007 9.432982 ACTATGATACTCAATCCTCTCTTTTCT 57.567 33.333 0.00 0.00 33.22 2.52
3095 5021 9.295825 TCCTCTCTTTTCTTATTTAATTGTGCA 57.704 29.630 0.00 0.00 0.00 4.57
3113 5039 6.650239 TGTGCATCATATCAACAAAAATGC 57.350 33.333 0.00 0.00 38.73 3.56
3114 5040 5.581479 TGTGCATCATATCAACAAAAATGCC 59.419 36.000 0.00 0.00 37.75 4.40
3115 5041 5.813672 GTGCATCATATCAACAAAAATGCCT 59.186 36.000 0.00 0.00 37.75 4.75
3116 5042 6.314400 GTGCATCATATCAACAAAAATGCCTT 59.686 34.615 0.00 0.00 37.75 4.35
3117 5043 6.314152 TGCATCATATCAACAAAAATGCCTTG 59.686 34.615 0.00 0.00 37.75 3.61
3118 5044 6.314400 GCATCATATCAACAAAAATGCCTTGT 59.686 34.615 0.00 0.00 38.65 3.16
3119 5045 7.148373 GCATCATATCAACAAAAATGCCTTGTT 60.148 33.333 0.00 0.00 45.56 2.83
3133 5059 3.088194 CCTTGTTGGCATGCATGATAC 57.912 47.619 30.64 21.56 0.00 2.24
3134 5060 2.691526 CCTTGTTGGCATGCATGATACT 59.308 45.455 30.64 0.00 0.00 2.12
3135 5061 3.884693 CCTTGTTGGCATGCATGATACTA 59.115 43.478 30.64 17.51 0.00 1.82
3136 5062 4.261322 CCTTGTTGGCATGCATGATACTAC 60.261 45.833 30.64 22.41 0.00 2.73
3137 5063 3.883669 TGTTGGCATGCATGATACTACA 58.116 40.909 30.64 24.35 0.00 2.74
3138 5064 3.878699 TGTTGGCATGCATGATACTACAG 59.121 43.478 30.64 0.20 0.00 2.74
3139 5065 2.497138 TGGCATGCATGATACTACAGC 58.503 47.619 30.64 11.02 0.00 4.40
3140 5066 1.808945 GGCATGCATGATACTACAGCC 59.191 52.381 30.64 16.44 0.00 4.85
3141 5067 1.808945 GCATGCATGATACTACAGCCC 59.191 52.381 30.64 3.82 0.00 5.19
3142 5068 2.551721 GCATGCATGATACTACAGCCCT 60.552 50.000 30.64 0.00 0.00 5.19
3143 5069 2.916702 TGCATGATACTACAGCCCTG 57.083 50.000 0.00 0.00 0.00 4.45
3144 5070 2.118679 TGCATGATACTACAGCCCTGT 58.881 47.619 6.17 6.17 46.87 4.00
3145 5071 2.505407 TGCATGATACTACAGCCCTGTT 59.495 45.455 6.21 0.00 41.83 3.16
3146 5072 3.054434 TGCATGATACTACAGCCCTGTTT 60.054 43.478 6.21 0.00 41.83 2.83
3147 5073 3.313526 GCATGATACTACAGCCCTGTTTG 59.686 47.826 6.21 3.36 41.83 2.93
3148 5074 3.627395 TGATACTACAGCCCTGTTTGG 57.373 47.619 6.21 1.09 41.83 3.28
3149 5075 3.178046 TGATACTACAGCCCTGTTTGGA 58.822 45.455 6.21 0.00 41.83 3.53
3150 5076 3.585289 TGATACTACAGCCCTGTTTGGAA 59.415 43.478 6.21 0.00 41.83 3.53
3151 5077 4.227300 TGATACTACAGCCCTGTTTGGAAT 59.773 41.667 6.21 0.24 41.83 3.01
3152 5078 3.073274 ACTACAGCCCTGTTTGGAATC 57.927 47.619 6.21 0.00 41.83 2.52
3153 5079 2.290960 ACTACAGCCCTGTTTGGAATCC 60.291 50.000 6.21 0.00 41.83 3.01
3154 5080 0.251787 ACAGCCCTGTTTGGAATCCC 60.252 55.000 0.00 0.00 41.83 3.85
3155 5081 0.040204 CAGCCCTGTTTGGAATCCCT 59.960 55.000 0.00 0.00 38.35 4.20
3156 5082 0.786435 AGCCCTGTTTGGAATCCCTT 59.214 50.000 0.00 0.00 38.35 3.95
3157 5083 1.186200 GCCCTGTTTGGAATCCCTTC 58.814 55.000 0.00 0.00 38.35 3.46
3158 5084 1.549950 GCCCTGTTTGGAATCCCTTCA 60.550 52.381 0.00 0.00 38.35 3.02
3159 5085 2.889756 GCCCTGTTTGGAATCCCTTCAT 60.890 50.000 0.00 0.00 38.35 2.57
3160 5086 2.762327 CCCTGTTTGGAATCCCTTCATG 59.238 50.000 0.00 0.00 38.35 3.07
3161 5087 2.762327 CCTGTTTGGAATCCCTTCATGG 59.238 50.000 0.00 0.00 38.35 3.66
3162 5088 3.564133 CCTGTTTGGAATCCCTTCATGGA 60.564 47.826 0.00 0.00 37.03 3.41
3163 5089 3.698040 CTGTTTGGAATCCCTTCATGGAG 59.302 47.826 0.00 0.00 37.96 3.86
3164 5090 2.428530 GTTTGGAATCCCTTCATGGAGC 59.571 50.000 0.00 0.00 37.96 4.70
3165 5091 1.600058 TGGAATCCCTTCATGGAGCT 58.400 50.000 0.00 0.00 37.96 4.09
3166 5092 1.213678 TGGAATCCCTTCATGGAGCTG 59.786 52.381 0.00 0.00 37.96 4.24
3167 5093 1.492176 GGAATCCCTTCATGGAGCTGA 59.508 52.381 0.00 0.00 37.96 4.26
3168 5094 2.570135 GAATCCCTTCATGGAGCTGAC 58.430 52.381 0.00 0.00 37.96 3.51
3169 5095 1.890552 ATCCCTTCATGGAGCTGACT 58.109 50.000 0.00 0.00 37.96 3.41
3170 5096 1.198713 TCCCTTCATGGAGCTGACTC 58.801 55.000 0.00 0.00 42.66 3.36
3171 5097 0.179089 CCCTTCATGGAGCTGACTCG 60.179 60.000 0.00 0.00 44.48 4.18
3172 5098 0.179089 CCTTCATGGAGCTGACTCGG 60.179 60.000 0.00 0.00 44.48 4.63
3173 5099 0.534412 CTTCATGGAGCTGACTCGGT 59.466 55.000 0.00 0.00 44.48 4.69
3174 5100 0.247460 TTCATGGAGCTGACTCGGTG 59.753 55.000 0.00 0.00 44.48 4.94
3175 5101 1.153489 CATGGAGCTGACTCGGTGG 60.153 63.158 0.00 0.00 44.48 4.61
3176 5102 1.305297 ATGGAGCTGACTCGGTGGA 60.305 57.895 0.00 0.00 44.48 4.02
3177 5103 1.326213 ATGGAGCTGACTCGGTGGAG 61.326 60.000 0.00 0.00 44.48 3.86
3186 5112 3.723554 CTCGGTGGAGTTGTAGAGC 57.276 57.895 0.00 0.00 35.48 4.09
3187 5113 1.178276 CTCGGTGGAGTTGTAGAGCT 58.822 55.000 0.00 0.00 35.48 4.09
3188 5114 1.133407 CTCGGTGGAGTTGTAGAGCTC 59.867 57.143 5.27 5.27 35.48 4.09
3189 5115 0.179161 CGGTGGAGTTGTAGAGCTCG 60.179 60.000 8.37 0.00 32.83 5.03
3190 5116 0.173708 GGTGGAGTTGTAGAGCTCGG 59.826 60.000 8.37 0.00 32.83 4.63
3191 5117 0.889306 GTGGAGTTGTAGAGCTCGGT 59.111 55.000 8.37 0.00 32.83 4.69
3192 5118 1.272769 GTGGAGTTGTAGAGCTCGGTT 59.727 52.381 8.37 0.00 32.83 4.44
3193 5119 1.968493 TGGAGTTGTAGAGCTCGGTTT 59.032 47.619 8.37 0.00 32.83 3.27
3194 5120 2.367567 TGGAGTTGTAGAGCTCGGTTTT 59.632 45.455 8.37 0.00 32.83 2.43
3195 5121 3.575256 TGGAGTTGTAGAGCTCGGTTTTA 59.425 43.478 8.37 0.00 32.83 1.52
3196 5122 3.925299 GGAGTTGTAGAGCTCGGTTTTAC 59.075 47.826 8.37 5.62 32.83 2.01
3197 5123 3.922910 AGTTGTAGAGCTCGGTTTTACC 58.077 45.455 8.37 0.00 34.05 2.85
3198 5124 2.998670 GTTGTAGAGCTCGGTTTTACCC 59.001 50.000 8.37 0.00 33.75 3.69
3206 5132 3.220447 CGGTTTTACCCGCTCAGAA 57.780 52.632 0.00 0.00 41.78 3.02
3207 5133 1.515081 CGGTTTTACCCGCTCAGAAA 58.485 50.000 0.00 0.00 41.78 2.52
3208 5134 1.874872 CGGTTTTACCCGCTCAGAAAA 59.125 47.619 0.00 0.00 41.78 2.29
3209 5135 2.486592 CGGTTTTACCCGCTCAGAAAAT 59.513 45.455 0.00 0.00 41.78 1.82
3210 5136 3.057806 CGGTTTTACCCGCTCAGAAAATT 60.058 43.478 0.00 0.00 41.78 1.82
3211 5137 4.154556 CGGTTTTACCCGCTCAGAAAATTA 59.845 41.667 0.00 0.00 41.78 1.40
3212 5138 5.637809 GGTTTTACCCGCTCAGAAAATTAG 58.362 41.667 0.00 0.00 30.04 1.73
3213 5139 4.957759 TTTACCCGCTCAGAAAATTAGC 57.042 40.909 0.00 0.00 0.00 3.09
3214 5140 2.789409 ACCCGCTCAGAAAATTAGCT 57.211 45.000 0.00 0.00 34.03 3.32
3215 5141 3.906720 ACCCGCTCAGAAAATTAGCTA 57.093 42.857 0.00 0.00 34.03 3.32
3216 5142 3.532542 ACCCGCTCAGAAAATTAGCTAC 58.467 45.455 0.00 0.00 34.03 3.58
3217 5143 3.055385 ACCCGCTCAGAAAATTAGCTACA 60.055 43.478 0.00 0.00 34.03 2.74
3218 5144 3.557595 CCCGCTCAGAAAATTAGCTACAG 59.442 47.826 0.00 0.00 34.03 2.74
3219 5145 4.433615 CCGCTCAGAAAATTAGCTACAGA 58.566 43.478 0.00 0.00 34.03 3.41
3220 5146 4.268884 CCGCTCAGAAAATTAGCTACAGAC 59.731 45.833 0.00 0.00 34.03 3.51
3221 5147 5.105752 CGCTCAGAAAATTAGCTACAGACT 58.894 41.667 0.00 0.00 34.03 3.24
3222 5148 5.231147 CGCTCAGAAAATTAGCTACAGACTC 59.769 44.000 0.00 0.00 34.03 3.36
3223 5149 5.231147 GCTCAGAAAATTAGCTACAGACTCG 59.769 44.000 0.00 0.00 33.40 4.18
3224 5150 6.268825 TCAGAAAATTAGCTACAGACTCGT 57.731 37.500 0.00 0.00 0.00 4.18
3225 5151 6.323266 TCAGAAAATTAGCTACAGACTCGTC 58.677 40.000 0.00 0.00 0.00 4.20
3226 5152 5.517054 CAGAAAATTAGCTACAGACTCGTCC 59.483 44.000 0.00 0.00 0.00 4.79
3227 5153 3.694535 AATTAGCTACAGACTCGTCCG 57.305 47.619 0.00 0.00 0.00 4.79
3228 5154 0.731417 TTAGCTACAGACTCGTCCGC 59.269 55.000 0.00 0.00 0.00 5.54
3229 5155 0.107800 TAGCTACAGACTCGTCCGCT 60.108 55.000 0.00 0.00 0.00 5.52
3230 5156 1.062845 GCTACAGACTCGTCCGCTC 59.937 63.158 0.00 0.00 0.00 5.03
3231 5157 1.722677 CTACAGACTCGTCCGCTCC 59.277 63.158 0.00 0.00 0.00 4.70
3232 5158 2.037913 CTACAGACTCGTCCGCTCCG 62.038 65.000 0.00 0.00 0.00 4.63
3250 5176 4.452733 GGAACGCGGTCCAGGGAG 62.453 72.222 37.53 0.00 37.65 4.30
3257 5183 3.151022 GGTCCAGGGAGCGGAGAG 61.151 72.222 1.22 0.00 31.65 3.20
3258 5184 3.151022 GTCCAGGGAGCGGAGAGG 61.151 72.222 0.00 0.00 31.65 3.69
3259 5185 3.347590 TCCAGGGAGCGGAGAGGA 61.348 66.667 0.00 0.00 0.00 3.71
3260 5186 2.837291 CCAGGGAGCGGAGAGGAG 60.837 72.222 0.00 0.00 0.00 3.69
3261 5187 3.535962 CAGGGAGCGGAGAGGAGC 61.536 72.222 0.00 0.00 0.00 4.70
3262 5188 4.851214 AGGGAGCGGAGAGGAGCC 62.851 72.222 0.00 0.00 0.00 4.70
3264 5190 3.077556 GGAGCGGAGAGGAGCCAA 61.078 66.667 0.00 0.00 0.00 4.52
3265 5191 2.660064 GGAGCGGAGAGGAGCCAAA 61.660 63.158 0.00 0.00 0.00 3.28
3266 5192 1.448717 GAGCGGAGAGGAGCCAAAC 60.449 63.158 0.00 0.00 0.00 2.93
3267 5193 2.815647 GCGGAGAGGAGCCAAACG 60.816 66.667 0.00 0.00 0.00 3.60
3268 5194 2.815647 CGGAGAGGAGCCAAACGC 60.816 66.667 0.00 0.00 37.98 4.84
3269 5195 2.815647 GGAGAGGAGCCAAACGCG 60.816 66.667 3.53 3.53 44.76 6.01
3270 5196 2.815647 GAGAGGAGCCAAACGCGG 60.816 66.667 12.47 0.00 44.76 6.46
3278 5204 4.524869 CCAAACGCGGCCTACATA 57.475 55.556 12.47 0.00 0.00 2.29
3279 5205 2.011453 CCAAACGCGGCCTACATAC 58.989 57.895 12.47 0.00 0.00 2.39
3280 5206 1.634225 CAAACGCGGCCTACATACG 59.366 57.895 12.47 0.00 0.00 3.06
3281 5207 0.802994 CAAACGCGGCCTACATACGA 60.803 55.000 12.47 0.00 0.00 3.43
3282 5208 0.103572 AAACGCGGCCTACATACGAT 59.896 50.000 12.47 0.00 0.00 3.73
3283 5209 0.953727 AACGCGGCCTACATACGATA 59.046 50.000 12.47 0.00 0.00 2.92
3284 5210 0.239347 ACGCGGCCTACATACGATAC 59.761 55.000 12.47 0.00 0.00 2.24
3285 5211 0.520404 CGCGGCCTACATACGATACT 59.480 55.000 0.00 0.00 0.00 2.12
3286 5212 1.465354 CGCGGCCTACATACGATACTC 60.465 57.143 0.00 0.00 0.00 2.59
3287 5213 1.135460 GCGGCCTACATACGATACTCC 60.135 57.143 0.00 0.00 0.00 3.85
3288 5214 1.471684 CGGCCTACATACGATACTCCC 59.528 57.143 0.00 0.00 0.00 4.30
3289 5215 2.522185 GGCCTACATACGATACTCCCA 58.478 52.381 0.00 0.00 0.00 4.37
3290 5216 3.097614 GGCCTACATACGATACTCCCAT 58.902 50.000 0.00 0.00 0.00 4.00
3291 5217 3.514309 GGCCTACATACGATACTCCCATT 59.486 47.826 0.00 0.00 0.00 3.16
3292 5218 4.495422 GCCTACATACGATACTCCCATTG 58.505 47.826 0.00 0.00 0.00 2.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.175760 TCGATGGTGGCTACTTCTGC 59.824 55.000 0.00 0.00 0.00 4.26
1 2 2.672961 TTCGATGGTGGCTACTTCTG 57.327 50.000 0.00 0.00 0.00 3.02
2 3 2.832129 TCTTTCGATGGTGGCTACTTCT 59.168 45.455 0.00 0.00 0.00 2.85
3 4 2.930682 GTCTTTCGATGGTGGCTACTTC 59.069 50.000 0.00 0.00 0.00 3.01
4 5 2.674177 CGTCTTTCGATGGTGGCTACTT 60.674 50.000 0.00 0.00 42.86 2.24
5 6 1.135083 CGTCTTTCGATGGTGGCTACT 60.135 52.381 0.00 0.00 42.86 2.57
6 7 1.135199 TCGTCTTTCGATGGTGGCTAC 60.135 52.381 0.00 0.00 44.01 3.58
7 8 1.179152 TCGTCTTTCGATGGTGGCTA 58.821 50.000 0.00 0.00 44.01 3.93
8 9 1.972198 TCGTCTTTCGATGGTGGCT 59.028 52.632 0.00 0.00 44.01 4.75
9 10 4.590487 TCGTCTTTCGATGGTGGC 57.410 55.556 0.00 0.00 44.01 5.01
77 78 8.387813 TGGTAATATTGGTCAAACTTAGGAAGT 58.612 33.333 0.00 0.00 45.46 3.01
78 79 8.801882 TGGTAATATTGGTCAAACTTAGGAAG 57.198 34.615 0.00 0.00 0.00 3.46
79 80 9.016438 GTTGGTAATATTGGTCAAACTTAGGAA 57.984 33.333 0.00 0.00 0.00 3.36
80 81 8.164733 TGTTGGTAATATTGGTCAAACTTAGGA 58.835 33.333 0.00 0.00 0.00 2.94
81 82 8.343168 TGTTGGTAATATTGGTCAAACTTAGG 57.657 34.615 0.00 0.00 0.00 2.69
84 85 8.865090 TGAATGTTGGTAATATTGGTCAAACTT 58.135 29.630 0.00 0.00 0.00 2.66
85 86 8.415950 TGAATGTTGGTAATATTGGTCAAACT 57.584 30.769 0.00 0.00 0.00 2.66
99 100 9.502091 GGATACAAGCTATTATGAATGTTGGTA 57.498 33.333 0.00 0.00 0.00 3.25
100 101 7.448469 GGGATACAAGCTATTATGAATGTTGGT 59.552 37.037 0.00 0.00 39.74 3.67
101 102 7.667219 AGGGATACAAGCTATTATGAATGTTGG 59.333 37.037 0.00 0.00 39.74 3.77
102 103 8.627208 AGGGATACAAGCTATTATGAATGTTG 57.373 34.615 0.00 0.00 39.74 3.33
103 104 9.726438 GTAGGGATACAAGCTATTATGAATGTT 57.274 33.333 0.00 0.00 39.74 2.71
104 105 8.880244 TGTAGGGATACAAGCTATTATGAATGT 58.120 33.333 0.00 0.00 39.74 2.71
105 106 9.725019 TTGTAGGGATACAAGCTATTATGAATG 57.275 33.333 0.00 0.00 35.27 2.67
107 108 9.555727 GTTTGTAGGGATACAAGCTATTATGAA 57.444 33.333 7.48 0.00 40.54 2.57
108 109 8.710239 TGTTTGTAGGGATACAAGCTATTATGA 58.290 33.333 13.63 0.00 40.37 2.15
109 110 8.902540 TGTTTGTAGGGATACAAGCTATTATG 57.097 34.615 13.63 0.00 40.37 1.90
111 112 9.337396 CAATGTTTGTAGGGATACAAGCTATTA 57.663 33.333 13.63 0.00 40.37 0.98
112 113 7.834181 ACAATGTTTGTAGGGATACAAGCTATT 59.166 33.333 13.63 9.78 43.27 1.73
113 114 7.346471 ACAATGTTTGTAGGGATACAAGCTAT 58.654 34.615 13.63 5.76 43.27 2.97
114 115 6.717289 ACAATGTTTGTAGGGATACAAGCTA 58.283 36.000 13.63 4.17 43.27 3.32
115 116 5.570320 ACAATGTTTGTAGGGATACAAGCT 58.430 37.500 13.63 0.00 43.27 3.74
116 117 5.897377 ACAATGTTTGTAGGGATACAAGC 57.103 39.130 7.72 7.72 43.27 4.01
123 124 9.699703 GCTTTATTTAAACAATGTTTGTAGGGA 57.300 29.630 20.40 0.00 44.59 4.20
124 125 9.705290 AGCTTTATTTAAACAATGTTTGTAGGG 57.295 29.630 20.40 6.65 44.59 3.53
165 166 7.122055 TGCGAATGTTGGTAATATCTCCTTTTT 59.878 33.333 0.00 0.00 0.00 1.94
166 167 6.601613 TGCGAATGTTGGTAATATCTCCTTTT 59.398 34.615 0.00 0.00 0.00 2.27
167 168 6.119536 TGCGAATGTTGGTAATATCTCCTTT 58.880 36.000 0.00 0.00 0.00 3.11
168 169 5.680619 TGCGAATGTTGGTAATATCTCCTT 58.319 37.500 0.00 0.00 0.00 3.36
169 170 5.290493 TGCGAATGTTGGTAATATCTCCT 57.710 39.130 0.00 0.00 0.00 3.69
170 171 6.560253 ATTGCGAATGTTGGTAATATCTCC 57.440 37.500 0.00 0.00 0.00 3.71
171 172 8.009974 GTGTATTGCGAATGTTGGTAATATCTC 58.990 37.037 0.00 0.00 29.66 2.75
172 173 7.497579 TGTGTATTGCGAATGTTGGTAATATCT 59.502 33.333 0.00 0.00 29.66 1.98
173 174 7.635423 TGTGTATTGCGAATGTTGGTAATATC 58.365 34.615 0.00 1.78 29.66 1.63
174 175 7.561021 TGTGTATTGCGAATGTTGGTAATAT 57.439 32.000 0.00 0.00 29.66 1.28
175 176 6.986904 TGTGTATTGCGAATGTTGGTAATA 57.013 33.333 0.00 0.00 0.00 0.98
176 177 5.888691 TGTGTATTGCGAATGTTGGTAAT 57.111 34.783 0.00 0.00 0.00 1.89
177 178 5.690997 TTGTGTATTGCGAATGTTGGTAA 57.309 34.783 0.00 0.00 0.00 2.85
178 179 5.888691 ATTGTGTATTGCGAATGTTGGTA 57.111 34.783 0.00 0.00 0.00 3.25
179 180 4.782019 ATTGTGTATTGCGAATGTTGGT 57.218 36.364 0.00 0.00 0.00 3.67
180 181 7.754069 ATTTATTGTGTATTGCGAATGTTGG 57.246 32.000 0.00 0.00 0.00 3.77
208 209 9.763837 ATGTATTCCATGATGATCCAAATACAT 57.236 29.630 17.02 17.02 40.92 2.29
209 210 9.590828 AATGTATTCCATGATGATCCAAATACA 57.409 29.630 15.12 15.12 40.40 2.29
212 213 9.991906 GAAAATGTATTCCATGATGATCCAAAT 57.008 29.630 0.00 0.00 32.82 2.32
213 214 8.979534 TGAAAATGTATTCCATGATGATCCAAA 58.020 29.630 0.00 0.00 32.82 3.28
214 215 8.415553 GTGAAAATGTATTCCATGATGATCCAA 58.584 33.333 0.00 0.00 32.82 3.53
215 216 7.781219 AGTGAAAATGTATTCCATGATGATCCA 59.219 33.333 0.00 0.00 32.82 3.41
216 217 8.080417 CAGTGAAAATGTATTCCATGATGATCC 58.920 37.037 0.00 0.00 32.82 3.36
217 218 8.627403 ACAGTGAAAATGTATTCCATGATGATC 58.373 33.333 0.00 0.00 47.00 2.92
218 219 8.529424 ACAGTGAAAATGTATTCCATGATGAT 57.471 30.769 0.00 0.00 47.00 2.45
219 220 7.943079 ACAGTGAAAATGTATTCCATGATGA 57.057 32.000 0.00 0.00 47.00 2.92
290 291 9.734620 CAGATAGTCAAATTTTGTGAAGTTTGA 57.265 29.630 8.89 5.93 44.28 2.69
291 292 9.520204 ACAGATAGTCAAATTTTGTGAAGTTTG 57.480 29.630 8.89 2.02 41.29 2.93
294 295 9.736023 GAAACAGATAGTCAAATTTTGTGAAGT 57.264 29.630 8.89 0.00 0.00 3.01
295 296 9.734620 TGAAACAGATAGTCAAATTTTGTGAAG 57.265 29.630 8.89 0.00 0.00 3.02
307 308 9.890629 AGCACTATATTTTGAAACAGATAGTCA 57.109 29.630 3.76 0.00 29.75 3.41
311 312 9.679661 TGGAAGCACTATATTTTGAAACAGATA 57.320 29.630 0.00 0.00 0.00 1.98
312 313 8.579850 TGGAAGCACTATATTTTGAAACAGAT 57.420 30.769 0.00 0.00 0.00 2.90
313 314 7.665559 ACTGGAAGCACTATATTTTGAAACAGA 59.334 33.333 0.00 0.00 37.60 3.41
314 315 7.820648 ACTGGAAGCACTATATTTTGAAACAG 58.179 34.615 0.00 0.00 37.60 3.16
315 316 7.759489 ACTGGAAGCACTATATTTTGAAACA 57.241 32.000 0.00 0.00 37.60 2.83
316 317 8.082242 ACAACTGGAAGCACTATATTTTGAAAC 58.918 33.333 0.00 0.00 37.60 2.78
317 318 8.177119 ACAACTGGAAGCACTATATTTTGAAA 57.823 30.769 0.00 0.00 37.60 2.69
318 319 7.360861 CGACAACTGGAAGCACTATATTTTGAA 60.361 37.037 0.00 0.00 37.60 2.69
319 320 6.092122 CGACAACTGGAAGCACTATATTTTGA 59.908 38.462 0.00 0.00 37.60 2.69
320 321 6.250819 CGACAACTGGAAGCACTATATTTTG 58.749 40.000 0.00 0.00 37.60 2.44
321 322 5.354234 CCGACAACTGGAAGCACTATATTTT 59.646 40.000 0.00 0.00 37.60 1.82
322 323 4.876107 CCGACAACTGGAAGCACTATATTT 59.124 41.667 0.00 0.00 37.60 1.40
323 324 4.081087 ACCGACAACTGGAAGCACTATATT 60.081 41.667 0.00 0.00 37.60 1.28
324 325 3.451178 ACCGACAACTGGAAGCACTATAT 59.549 43.478 0.00 0.00 37.60 0.86
325 326 2.829720 ACCGACAACTGGAAGCACTATA 59.170 45.455 0.00 0.00 37.60 1.31
326 327 1.623811 ACCGACAACTGGAAGCACTAT 59.376 47.619 0.00 0.00 37.60 2.12
327 328 1.045407 ACCGACAACTGGAAGCACTA 58.955 50.000 0.00 0.00 37.60 2.74
328 329 1.045407 TACCGACAACTGGAAGCACT 58.955 50.000 0.00 0.00 37.60 4.40
329 330 1.732259 CATACCGACAACTGGAAGCAC 59.268 52.381 0.00 0.00 37.60 4.40
330 331 1.346395 ACATACCGACAACTGGAAGCA 59.654 47.619 0.00 0.00 37.60 3.91
331 332 1.732259 CACATACCGACAACTGGAAGC 59.268 52.381 0.00 0.00 37.60 3.86
332 333 3.040147 ACACATACCGACAACTGGAAG 57.960 47.619 0.00 0.00 42.29 3.46
333 334 3.615592 GCTACACATACCGACAACTGGAA 60.616 47.826 0.00 0.00 0.00 3.53
334 335 2.094390 GCTACACATACCGACAACTGGA 60.094 50.000 0.00 0.00 0.00 3.86
335 336 2.094182 AGCTACACATACCGACAACTGG 60.094 50.000 0.00 0.00 0.00 4.00
336 337 3.119459 AGAGCTACACATACCGACAACTG 60.119 47.826 0.00 0.00 0.00 3.16
337 338 3.090037 AGAGCTACACATACCGACAACT 58.910 45.455 0.00 0.00 0.00 3.16
338 339 3.436496 GAGAGCTACACATACCGACAAC 58.564 50.000 0.00 0.00 0.00 3.32
339 340 2.096980 CGAGAGCTACACATACCGACAA 59.903 50.000 0.00 0.00 0.00 3.18
340 341 1.669265 CGAGAGCTACACATACCGACA 59.331 52.381 0.00 0.00 0.00 4.35
696 707 2.044650 GAGGATTGCTGCAGGGCA 60.045 61.111 17.12 6.13 40.74 5.36
698 709 1.817099 GACGAGGATTGCTGCAGGG 60.817 63.158 17.12 0.00 0.00 4.45
826 837 2.736995 CGAGACAAAAGCGGCCGA 60.737 61.111 33.48 0.00 0.00 5.54
836 847 2.809174 CACGCGATGCCGAGACAA 60.809 61.111 15.93 0.00 38.94 3.18
1036 1057 4.096003 GGCCTTGGTAGCAGCCGA 62.096 66.667 9.17 0.00 35.30 5.54
1045 1066 2.990479 GGAGTCGATGGCCTTGGT 59.010 61.111 3.32 0.00 0.00 3.67
1427 3190 2.981909 AGGACCGACGACGAAGCA 60.982 61.111 9.28 0.00 42.66 3.91
1552 3315 3.003480 CCCGCTCCAGAAAACTCTTAAG 58.997 50.000 0.00 0.00 0.00 1.85
1555 3318 0.606673 GCCCGCTCCAGAAAACTCTT 60.607 55.000 0.00 0.00 0.00 2.85
2024 3912 1.228228 GGCCATGAAGGATCAGGCA 59.772 57.895 0.00 0.00 44.71 4.75
2083 3971 1.153429 GCGAGCCGGTAACCTCAAT 60.153 57.895 1.90 0.00 0.00 2.57
2110 3998 3.071206 AGACGCCTCGTGCCTCAT 61.071 61.111 0.00 0.00 41.37 2.90
2238 4129 3.080319 ACTCTTCTTTGCATTGCTCCTC 58.920 45.455 10.49 0.00 0.00 3.71
2265 4156 0.320374 CTGCGGACACCTTTCCTGTA 59.680 55.000 0.00 0.00 32.88 2.74
2566 4492 4.755411 CTTCGCATCTTAGGTTTGTCCTA 58.245 43.478 0.00 0.00 46.10 2.94
2568 4494 2.096013 GCTTCGCATCTTAGGTTTGTCC 59.904 50.000 0.00 0.00 0.00 4.02
2569 4495 2.096013 GGCTTCGCATCTTAGGTTTGTC 59.904 50.000 0.00 0.00 0.00 3.18
2570 4496 2.084546 GGCTTCGCATCTTAGGTTTGT 58.915 47.619 0.00 0.00 0.00 2.83
2571 4497 2.083774 TGGCTTCGCATCTTAGGTTTG 58.916 47.619 0.00 0.00 0.00 2.93
2572 4498 2.489938 TGGCTTCGCATCTTAGGTTT 57.510 45.000 0.00 0.00 0.00 3.27
2573 4499 2.489938 TTGGCTTCGCATCTTAGGTT 57.510 45.000 0.00 0.00 0.00 3.50
2574 4500 2.489938 TTTGGCTTCGCATCTTAGGT 57.510 45.000 0.00 0.00 0.00 3.08
2575 4501 3.009723 TCTTTTGGCTTCGCATCTTAGG 58.990 45.455 0.00 0.00 0.00 2.69
2576 4502 4.685169 TTCTTTTGGCTTCGCATCTTAG 57.315 40.909 0.00 0.00 0.00 2.18
2577 4503 4.277174 TGTTTCTTTTGGCTTCGCATCTTA 59.723 37.500 0.00 0.00 0.00 2.10
2578 4504 3.068024 TGTTTCTTTTGGCTTCGCATCTT 59.932 39.130 0.00 0.00 0.00 2.40
2579 4505 2.622942 TGTTTCTTTTGGCTTCGCATCT 59.377 40.909 0.00 0.00 0.00 2.90
2580 4506 2.982470 CTGTTTCTTTTGGCTTCGCATC 59.018 45.455 0.00 0.00 0.00 3.91
2581 4507 2.622942 TCTGTTTCTTTTGGCTTCGCAT 59.377 40.909 0.00 0.00 0.00 4.73
2582 4508 2.020720 TCTGTTTCTTTTGGCTTCGCA 58.979 42.857 0.00 0.00 0.00 5.10
2583 4509 2.774439 TCTGTTTCTTTTGGCTTCGC 57.226 45.000 0.00 0.00 0.00 4.70
2584 4510 5.576774 ACTTTTTCTGTTTCTTTTGGCTTCG 59.423 36.000 0.00 0.00 0.00 3.79
2585 4511 6.968131 ACTTTTTCTGTTTCTTTTGGCTTC 57.032 33.333 0.00 0.00 0.00 3.86
2586 4512 7.382898 TGTACTTTTTCTGTTTCTTTTGGCTT 58.617 30.769 0.00 0.00 0.00 4.35
2587 4513 6.930731 TGTACTTTTTCTGTTTCTTTTGGCT 58.069 32.000 0.00 0.00 0.00 4.75
2588 4514 7.589574 TTGTACTTTTTCTGTTTCTTTTGGC 57.410 32.000 0.00 0.00 0.00 4.52
2589 4515 9.805966 GTTTTGTACTTTTTCTGTTTCTTTTGG 57.194 29.630 0.00 0.00 0.00 3.28
2592 4518 9.974980 TCTGTTTTGTACTTTTTCTGTTTCTTT 57.025 25.926 0.00 0.00 0.00 2.52
2593 4519 9.626045 CTCTGTTTTGTACTTTTTCTGTTTCTT 57.374 29.630 0.00 0.00 0.00 2.52
2594 4520 7.755373 GCTCTGTTTTGTACTTTTTCTGTTTCT 59.245 33.333 0.00 0.00 0.00 2.52
2595 4521 7.540745 TGCTCTGTTTTGTACTTTTTCTGTTTC 59.459 33.333 0.00 0.00 0.00 2.78
2596 4522 7.375053 TGCTCTGTTTTGTACTTTTTCTGTTT 58.625 30.769 0.00 0.00 0.00 2.83
2597 4523 6.919721 TGCTCTGTTTTGTACTTTTTCTGTT 58.080 32.000 0.00 0.00 0.00 3.16
2598 4524 6.509418 TGCTCTGTTTTGTACTTTTTCTGT 57.491 33.333 0.00 0.00 0.00 3.41
2599 4525 7.992180 AATGCTCTGTTTTGTACTTTTTCTG 57.008 32.000 0.00 0.00 0.00 3.02
2600 4526 8.470002 AGAAATGCTCTGTTTTGTACTTTTTCT 58.530 29.630 0.00 0.00 31.12 2.52
2601 4527 8.634475 AGAAATGCTCTGTTTTGTACTTTTTC 57.366 30.769 0.00 0.00 31.12 2.29
2602 4528 7.706607 GGAGAAATGCTCTGTTTTGTACTTTTT 59.293 33.333 0.00 0.00 43.43 1.94
2603 4529 7.203218 GGAGAAATGCTCTGTTTTGTACTTTT 58.797 34.615 0.00 0.00 43.43 2.27
2604 4530 6.239036 GGGAGAAATGCTCTGTTTTGTACTTT 60.239 38.462 0.00 0.00 43.43 2.66
2605 4531 5.241728 GGGAGAAATGCTCTGTTTTGTACTT 59.758 40.000 0.00 0.00 43.43 2.24
2606 4532 4.762251 GGGAGAAATGCTCTGTTTTGTACT 59.238 41.667 0.00 0.00 43.43 2.73
2607 4533 4.082733 GGGGAGAAATGCTCTGTTTTGTAC 60.083 45.833 0.00 0.00 43.43 2.90
2608 4534 4.079253 GGGGAGAAATGCTCTGTTTTGTA 58.921 43.478 0.00 0.00 43.43 2.41
2609 4535 2.893489 GGGGAGAAATGCTCTGTTTTGT 59.107 45.455 0.00 0.00 43.43 2.83
2610 4536 3.057033 CAGGGGAGAAATGCTCTGTTTTG 60.057 47.826 0.00 0.00 43.43 2.44
2611 4537 3.160269 CAGGGGAGAAATGCTCTGTTTT 58.840 45.455 0.00 0.00 43.43 2.43
2612 4538 2.108952 ACAGGGGAGAAATGCTCTGTTT 59.891 45.455 0.00 0.00 43.43 2.83
2613 4539 1.707427 ACAGGGGAGAAATGCTCTGTT 59.293 47.619 0.00 0.00 43.43 3.16
2614 4540 1.280421 GACAGGGGAGAAATGCTCTGT 59.720 52.381 1.60 1.60 43.43 3.41
2615 4541 1.741732 CGACAGGGGAGAAATGCTCTG 60.742 57.143 0.00 0.00 43.43 3.35
2616 4542 0.539051 CGACAGGGGAGAAATGCTCT 59.461 55.000 0.00 0.00 43.43 4.09
2617 4543 1.092345 GCGACAGGGGAGAAATGCTC 61.092 60.000 0.00 0.00 43.17 4.26
2618 4544 1.078143 GCGACAGGGGAGAAATGCT 60.078 57.895 0.00 0.00 0.00 3.79
2619 4545 2.115291 GGCGACAGGGGAGAAATGC 61.115 63.158 0.00 0.00 0.00 3.56
2620 4546 1.452108 GGGCGACAGGGGAGAAATG 60.452 63.158 0.00 0.00 0.00 2.32
2621 4547 0.326238 TAGGGCGACAGGGGAGAAAT 60.326 55.000 0.00 0.00 0.00 2.17
2622 4548 0.326238 ATAGGGCGACAGGGGAGAAA 60.326 55.000 0.00 0.00 0.00 2.52
2623 4549 1.048724 CATAGGGCGACAGGGGAGAA 61.049 60.000 0.00 0.00 0.00 2.87
2624 4550 1.457643 CATAGGGCGACAGGGGAGA 60.458 63.158 0.00 0.00 0.00 3.71
2625 4551 1.762460 ACATAGGGCGACAGGGGAG 60.762 63.158 0.00 0.00 0.00 4.30
2626 4552 2.063979 CACATAGGGCGACAGGGGA 61.064 63.158 0.00 0.00 0.00 4.81
2627 4553 2.505982 CACATAGGGCGACAGGGG 59.494 66.667 0.00 0.00 0.00 4.79
2628 4554 2.203070 GCACATAGGGCGACAGGG 60.203 66.667 0.00 0.00 0.00 4.45
2629 4555 0.392998 AAAGCACATAGGGCGACAGG 60.393 55.000 0.00 0.00 36.08 4.00
2630 4556 1.131126 CAAAAGCACATAGGGCGACAG 59.869 52.381 0.00 0.00 36.08 3.51
2631 4557 1.164411 CAAAAGCACATAGGGCGACA 58.836 50.000 0.00 0.00 36.08 4.35
2632 4558 1.165270 ACAAAAGCACATAGGGCGAC 58.835 50.000 0.00 0.00 36.08 5.19
2633 4559 1.904287 AACAAAAGCACATAGGGCGA 58.096 45.000 0.00 0.00 36.08 5.54
2634 4560 4.024048 CCTATAACAAAAGCACATAGGGCG 60.024 45.833 0.00 0.00 36.24 6.13
2635 4561 4.261614 GCCTATAACAAAAGCACATAGGGC 60.262 45.833 7.78 0.00 39.01 5.19
2636 4562 5.133221 AGCCTATAACAAAAGCACATAGGG 58.867 41.667 7.78 0.00 39.01 3.53
2637 4563 5.050091 CGAGCCTATAACAAAAGCACATAGG 60.050 44.000 0.00 0.00 40.74 2.57
2638 4564 5.523916 ACGAGCCTATAACAAAAGCACATAG 59.476 40.000 0.00 0.00 0.00 2.23
2639 4565 5.424757 ACGAGCCTATAACAAAAGCACATA 58.575 37.500 0.00 0.00 0.00 2.29
2640 4566 4.261801 ACGAGCCTATAACAAAAGCACAT 58.738 39.130 0.00 0.00 0.00 3.21
2641 4567 3.670625 ACGAGCCTATAACAAAAGCACA 58.329 40.909 0.00 0.00 0.00 4.57
2642 4568 3.241995 CGACGAGCCTATAACAAAAGCAC 60.242 47.826 0.00 0.00 0.00 4.40
2643 4569 2.927477 CGACGAGCCTATAACAAAAGCA 59.073 45.455 0.00 0.00 0.00 3.91
2644 4570 2.285660 GCGACGAGCCTATAACAAAAGC 60.286 50.000 0.00 0.00 40.81 3.51
2645 4571 3.570939 GCGACGAGCCTATAACAAAAG 57.429 47.619 0.00 0.00 40.81 2.27
2658 4584 5.907197 ATAATACTTTCCATTGCGACGAG 57.093 39.130 0.00 0.00 0.00 4.18
2659 4585 6.274579 TGTATAATACTTTCCATTGCGACGA 58.725 36.000 0.00 0.00 0.00 4.20
2660 4586 6.519353 TGTATAATACTTTCCATTGCGACG 57.481 37.500 0.00 0.00 0.00 5.12
2661 4587 9.973246 CATATGTATAATACTTTCCATTGCGAC 57.027 33.333 0.00 0.00 0.00 5.19
2662 4588 9.936759 TCATATGTATAATACTTTCCATTGCGA 57.063 29.630 1.90 0.00 0.00 5.10
2680 4606 9.487442 TGCATTATGGAGGTAGTATCATATGTA 57.513 33.333 1.90 0.00 0.00 2.29
2681 4607 8.379428 TGCATTATGGAGGTAGTATCATATGT 57.621 34.615 1.90 0.00 0.00 2.29
2684 4610 9.715119 ACTATGCATTATGGAGGTAGTATCATA 57.285 33.333 3.54 0.00 0.00 2.15
2685 4611 8.615360 ACTATGCATTATGGAGGTAGTATCAT 57.385 34.615 3.54 0.00 0.00 2.45
2686 4612 9.715119 ATACTATGCATTATGGAGGTAGTATCA 57.285 33.333 3.54 0.00 31.70 2.15
2688 4614 9.715119 TGATACTATGCATTATGGAGGTAGTAT 57.285 33.333 15.17 15.17 36.89 2.12
2689 4615 9.715119 ATGATACTATGCATTATGGAGGTAGTA 57.285 33.333 3.54 3.44 0.00 1.82
2690 4616 8.615360 ATGATACTATGCATTATGGAGGTAGT 57.385 34.615 3.54 0.88 0.00 2.73
2693 4619 9.444668 AGATATGATACTATGCATTATGGAGGT 57.555 33.333 3.54 0.00 0.00 3.85
2697 4623 9.842775 ACCAAGATATGATACTATGCATTATGG 57.157 33.333 3.54 0.00 0.00 2.74
2740 4666 9.884636 ACTAGTATGTGTCTTGCATAACAATAA 57.115 29.630 0.00 0.00 37.72 1.40
2742 4668 9.314321 GTACTAGTATGTGTCTTGCATAACAAT 57.686 33.333 5.75 3.68 37.72 2.71
2743 4669 8.308207 TGTACTAGTATGTGTCTTGCATAACAA 58.692 33.333 5.75 0.00 36.62 2.83
2744 4670 7.832769 TGTACTAGTATGTGTCTTGCATAACA 58.167 34.615 5.75 0.00 31.54 2.41
2745 4671 8.873215 ATGTACTAGTATGTGTCTTGCATAAC 57.127 34.615 5.75 0.00 31.54 1.89
2746 4672 8.691797 TGATGTACTAGTATGTGTCTTGCATAA 58.308 33.333 5.75 0.00 31.54 1.90
2747 4673 8.232913 TGATGTACTAGTATGTGTCTTGCATA 57.767 34.615 5.75 0.00 0.00 3.14
2748 4674 7.112452 TGATGTACTAGTATGTGTCTTGCAT 57.888 36.000 5.75 1.43 0.00 3.96
2749 4675 6.524101 TGATGTACTAGTATGTGTCTTGCA 57.476 37.500 5.75 0.00 0.00 4.08
2750 4676 8.425577 AAATGATGTACTAGTATGTGTCTTGC 57.574 34.615 5.75 0.00 0.00 4.01
2774 4700 8.950210 CGGAGGGAGTATTACGTATCTTATTAA 58.050 37.037 0.00 0.00 0.00 1.40
2775 4701 8.103305 ACGGAGGGAGTATTACGTATCTTATTA 58.897 37.037 0.00 0.00 32.30 0.98
2776 4702 6.944862 ACGGAGGGAGTATTACGTATCTTATT 59.055 38.462 0.00 0.00 32.30 1.40
2777 4703 6.479884 ACGGAGGGAGTATTACGTATCTTAT 58.520 40.000 0.00 0.00 32.30 1.73
2778 4704 5.869579 ACGGAGGGAGTATTACGTATCTTA 58.130 41.667 0.00 0.00 32.30 2.10
2779 4705 4.723309 ACGGAGGGAGTATTACGTATCTT 58.277 43.478 0.00 0.00 32.30 2.40
2780 4706 4.363991 ACGGAGGGAGTATTACGTATCT 57.636 45.455 0.00 0.00 32.30 1.98
2781 4707 5.444663 AAACGGAGGGAGTATTACGTATC 57.555 43.478 0.00 0.00 33.85 2.24
2782 4708 5.859205 AAAACGGAGGGAGTATTACGTAT 57.141 39.130 0.00 0.00 33.85 3.06
2783 4709 5.659440 AAAAACGGAGGGAGTATTACGTA 57.341 39.130 0.00 0.00 33.85 3.57
2784 4710 4.541973 AAAAACGGAGGGAGTATTACGT 57.458 40.909 0.00 0.00 35.95 3.57
2785 4711 7.543947 AAATAAAAACGGAGGGAGTATTACG 57.456 36.000 0.00 0.00 0.00 3.18
2786 4712 9.605275 ACTAAATAAAAACGGAGGGAGTATTAC 57.395 33.333 0.00 0.00 0.00 1.89
2788 4714 9.170734 GAACTAAATAAAAACGGAGGGAGTATT 57.829 33.333 0.00 0.00 0.00 1.89
2789 4715 7.493645 CGAACTAAATAAAAACGGAGGGAGTAT 59.506 37.037 0.00 0.00 0.00 2.12
2790 4716 6.813152 CGAACTAAATAAAAACGGAGGGAGTA 59.187 38.462 0.00 0.00 0.00 2.59
2791 4717 5.640783 CGAACTAAATAAAAACGGAGGGAGT 59.359 40.000 0.00 0.00 0.00 3.85
2792 4718 5.446875 GCGAACTAAATAAAAACGGAGGGAG 60.447 44.000 0.00 0.00 0.00 4.30
2793 4719 4.392754 GCGAACTAAATAAAAACGGAGGGA 59.607 41.667 0.00 0.00 0.00 4.20
2794 4720 4.655027 GCGAACTAAATAAAAACGGAGGG 58.345 43.478 0.00 0.00 0.00 4.30
2795 4721 4.143052 ACGCGAACTAAATAAAAACGGAGG 60.143 41.667 15.93 0.00 0.00 4.30
2796 4722 4.949756 ACGCGAACTAAATAAAAACGGAG 58.050 39.130 15.93 0.00 0.00 4.63
2797 4723 4.988708 ACGCGAACTAAATAAAAACGGA 57.011 36.364 15.93 0.00 0.00 4.69
2798 4724 7.109259 GCTAATACGCGAACTAAATAAAAACGG 59.891 37.037 15.93 0.00 0.00 4.44
2799 4725 7.842721 AGCTAATACGCGAACTAAATAAAAACG 59.157 33.333 15.93 0.00 34.40 3.60
2800 4726 9.481800 AAGCTAATACGCGAACTAAATAAAAAC 57.518 29.630 15.93 0.00 34.40 2.43
2802 4728 9.480538 CAAAGCTAATACGCGAACTAAATAAAA 57.519 29.630 15.93 0.00 34.40 1.52
2803 4729 8.117988 CCAAAGCTAATACGCGAACTAAATAAA 58.882 33.333 15.93 0.00 34.40 1.40
2804 4730 7.278424 ACCAAAGCTAATACGCGAACTAAATAA 59.722 33.333 15.93 0.00 34.40 1.40
2805 4731 6.757947 ACCAAAGCTAATACGCGAACTAAATA 59.242 34.615 15.93 0.00 34.40 1.40
2806 4732 5.583457 ACCAAAGCTAATACGCGAACTAAAT 59.417 36.000 15.93 0.00 34.40 1.40
2807 4733 4.931002 ACCAAAGCTAATACGCGAACTAAA 59.069 37.500 15.93 0.00 34.40 1.85
2808 4734 4.497300 ACCAAAGCTAATACGCGAACTAA 58.503 39.130 15.93 0.00 34.40 2.24
2809 4735 4.107622 GACCAAAGCTAATACGCGAACTA 58.892 43.478 15.93 0.00 34.40 2.24
2810 4736 2.928116 GACCAAAGCTAATACGCGAACT 59.072 45.455 15.93 0.00 34.40 3.01
2811 4737 2.669434 TGACCAAAGCTAATACGCGAAC 59.331 45.455 15.93 0.00 34.40 3.95
2812 4738 2.962125 TGACCAAAGCTAATACGCGAA 58.038 42.857 15.93 0.00 34.40 4.70
2813 4739 2.658373 TGACCAAAGCTAATACGCGA 57.342 45.000 15.93 0.00 34.40 5.87
2814 4740 3.670203 CTTTGACCAAAGCTAATACGCG 58.330 45.455 3.53 3.53 40.94 6.01
2833 4759 6.127479 TGGTCAAAGTTTACAAAGCATGACTT 60.127 34.615 0.00 0.00 41.70 3.01
2834 4760 5.359576 TGGTCAAAGTTTACAAAGCATGACT 59.640 36.000 0.00 0.00 36.91 3.41
2835 4761 5.587289 TGGTCAAAGTTTACAAAGCATGAC 58.413 37.500 0.00 0.00 36.18 3.06
2836 4762 5.843673 TGGTCAAAGTTTACAAAGCATGA 57.156 34.783 0.00 0.00 0.00 3.07
2837 4763 7.481275 AATTGGTCAAAGTTTACAAAGCATG 57.519 32.000 0.00 0.00 0.00 4.06
2838 4764 8.504812 AAAATTGGTCAAAGTTTACAAAGCAT 57.495 26.923 4.37 0.00 34.44 3.79
2839 4765 7.913674 AAAATTGGTCAAAGTTTACAAAGCA 57.086 28.000 4.37 0.00 34.44 3.91
2985 4911 9.921637 ACTGAAGTCAAATTTTGTAAAGTTTGA 57.078 25.926 18.19 18.19 45.89 2.69
3003 4929 7.261325 TCAGCATATTAGAGTTGACTGAAGTC 58.739 38.462 3.41 3.41 44.97 3.01
3004 4930 7.093552 ACTCAGCATATTAGAGTTGACTGAAGT 60.094 37.037 0.00 0.00 39.45 3.01
3005 4931 7.264221 ACTCAGCATATTAGAGTTGACTGAAG 58.736 38.462 0.00 0.00 39.45 3.02
3006 4932 7.175347 ACTCAGCATATTAGAGTTGACTGAA 57.825 36.000 0.00 0.00 39.45 3.02
3007 4933 6.782082 ACTCAGCATATTAGAGTTGACTGA 57.218 37.500 0.00 0.00 39.45 3.41
3008 4934 8.932945 TTTACTCAGCATATTAGAGTTGACTG 57.067 34.615 0.00 0.00 42.25 3.51
3020 4946 9.391006 TCCTTCGTTTTTATTTACTCAGCATAT 57.609 29.630 0.00 0.00 0.00 1.78
3021 4947 8.780846 TCCTTCGTTTTTATTTACTCAGCATA 57.219 30.769 0.00 0.00 0.00 3.14
3022 4948 7.681939 TCCTTCGTTTTTATTTACTCAGCAT 57.318 32.000 0.00 0.00 0.00 3.79
3023 4949 7.227910 ACTTCCTTCGTTTTTATTTACTCAGCA 59.772 33.333 0.00 0.00 0.00 4.41
3024 4950 7.582352 ACTTCCTTCGTTTTTATTTACTCAGC 58.418 34.615 0.00 0.00 0.00 4.26
3026 4952 9.768662 AGTACTTCCTTCGTTTTTATTTACTCA 57.231 29.630 0.00 0.00 0.00 3.41
3031 4957 9.993454 AGTCTAGTACTTCCTTCGTTTTTATTT 57.007 29.630 0.00 0.00 33.35 1.40
3035 4961 8.800332 TCATAGTCTAGTACTTCCTTCGTTTTT 58.200 33.333 0.00 0.00 39.80 1.94
3036 4962 8.345724 TCATAGTCTAGTACTTCCTTCGTTTT 57.654 34.615 0.00 0.00 39.80 2.43
3037 4963 7.934855 TCATAGTCTAGTACTTCCTTCGTTT 57.065 36.000 0.00 0.00 39.80 3.60
3038 4964 9.054922 GTATCATAGTCTAGTACTTCCTTCGTT 57.945 37.037 0.00 0.00 39.80 3.85
3039 4965 8.431222 AGTATCATAGTCTAGTACTTCCTTCGT 58.569 37.037 0.00 0.00 39.80 3.85
3040 4966 8.836268 AGTATCATAGTCTAGTACTTCCTTCG 57.164 38.462 0.00 0.00 39.80 3.79
3041 4967 9.781633 TGAGTATCATAGTCTAGTACTTCCTTC 57.218 37.037 0.00 0.00 42.56 3.46
3069 4995 9.295825 TGCACAATTAAATAAGAAAAGAGAGGA 57.704 29.630 0.00 0.00 0.00 3.71
3087 5013 8.178964 GCATTTTTGTTGATATGATGCACAATT 58.821 29.630 0.00 0.00 38.52 2.32
3088 5014 7.201661 GGCATTTTTGTTGATATGATGCACAAT 60.202 33.333 7.58 0.00 39.95 2.71
3089 5015 6.092396 GGCATTTTTGTTGATATGATGCACAA 59.908 34.615 7.58 0.00 39.95 3.33
3090 5016 5.581479 GGCATTTTTGTTGATATGATGCACA 59.419 36.000 7.58 0.00 39.95 4.57
3091 5017 5.813672 AGGCATTTTTGTTGATATGATGCAC 59.186 36.000 7.58 0.00 39.95 4.57
3092 5018 5.979993 AGGCATTTTTGTTGATATGATGCA 58.020 33.333 7.58 0.00 39.95 3.96
3093 5019 6.314400 ACAAGGCATTTTTGTTGATATGATGC 59.686 34.615 0.00 0.00 35.32 3.91
3094 5020 7.837202 ACAAGGCATTTTTGTTGATATGATG 57.163 32.000 0.00 0.00 35.32 3.07
3113 5039 2.691526 AGTATCATGCATGCCAACAAGG 59.308 45.455 22.25 0.00 41.84 3.61
3114 5040 4.336153 TGTAGTATCATGCATGCCAACAAG 59.664 41.667 22.25 0.00 0.00 3.16
3115 5041 4.268359 TGTAGTATCATGCATGCCAACAA 58.732 39.130 22.25 3.72 0.00 2.83
3116 5042 3.878699 CTGTAGTATCATGCATGCCAACA 59.121 43.478 22.25 17.62 0.00 3.33
3117 5043 3.304257 GCTGTAGTATCATGCATGCCAAC 60.304 47.826 22.25 17.59 0.00 3.77
3118 5044 2.880268 GCTGTAGTATCATGCATGCCAA 59.120 45.455 22.25 5.34 0.00 4.52
3119 5045 2.497138 GCTGTAGTATCATGCATGCCA 58.503 47.619 22.25 8.84 0.00 4.92
3120 5046 1.808945 GGCTGTAGTATCATGCATGCC 59.191 52.381 22.25 12.26 0.00 4.40
3121 5047 1.808945 GGGCTGTAGTATCATGCATGC 59.191 52.381 22.25 11.82 0.00 4.06
3122 5048 3.072211 CAGGGCTGTAGTATCATGCATG 58.928 50.000 21.07 21.07 0.00 4.06
3123 5049 2.707791 ACAGGGCTGTAGTATCATGCAT 59.292 45.455 0.00 0.00 42.90 3.96
3124 5050 2.118679 ACAGGGCTGTAGTATCATGCA 58.881 47.619 0.00 0.00 42.90 3.96
3125 5051 2.918712 ACAGGGCTGTAGTATCATGC 57.081 50.000 0.00 0.00 42.90 4.06
3126 5052 3.879295 CCAAACAGGGCTGTAGTATCATG 59.121 47.826 0.00 0.00 44.13 3.07
3127 5053 3.780294 TCCAAACAGGGCTGTAGTATCAT 59.220 43.478 0.00 0.00 44.13 2.45
3128 5054 3.178046 TCCAAACAGGGCTGTAGTATCA 58.822 45.455 0.00 0.00 44.13 2.15
3129 5055 3.906720 TCCAAACAGGGCTGTAGTATC 57.093 47.619 0.00 0.00 44.13 2.24
3130 5056 4.385310 GGATTCCAAACAGGGCTGTAGTAT 60.385 45.833 0.00 0.00 44.13 2.12
3131 5057 3.054655 GGATTCCAAACAGGGCTGTAGTA 60.055 47.826 0.00 0.00 44.13 1.82
3132 5058 2.290960 GGATTCCAAACAGGGCTGTAGT 60.291 50.000 0.00 0.00 44.13 2.73
3133 5059 2.369394 GGATTCCAAACAGGGCTGTAG 58.631 52.381 0.00 0.00 44.13 2.74
3134 5060 1.005450 GGGATTCCAAACAGGGCTGTA 59.995 52.381 4.80 0.00 44.13 2.74
3135 5061 2.684896 AGGGATTCCAAACAGGGCTGT 61.685 52.381 4.80 0.00 39.71 4.40
3136 5062 0.040204 AGGGATTCCAAACAGGGCTG 59.960 55.000 4.80 0.00 38.24 4.85
3137 5063 0.786435 AAGGGATTCCAAACAGGGCT 59.214 50.000 4.80 0.00 38.24 5.19
3138 5064 1.186200 GAAGGGATTCCAAACAGGGC 58.814 55.000 4.80 0.00 38.24 5.19
3139 5065 2.603075 TGAAGGGATTCCAAACAGGG 57.397 50.000 4.80 0.00 38.24 4.45
3140 5066 2.762327 CCATGAAGGGATTCCAAACAGG 59.238 50.000 4.80 2.95 39.47 4.00
3141 5067 3.698040 CTCCATGAAGGGATTCCAAACAG 59.302 47.826 4.80 0.00 36.09 3.16
3142 5068 3.700538 CTCCATGAAGGGATTCCAAACA 58.299 45.455 4.80 1.51 36.09 2.83
3143 5069 2.428530 GCTCCATGAAGGGATTCCAAAC 59.571 50.000 4.80 0.00 36.09 2.93
3144 5070 2.312741 AGCTCCATGAAGGGATTCCAAA 59.687 45.455 4.80 0.00 36.09 3.28
3145 5071 1.925255 AGCTCCATGAAGGGATTCCAA 59.075 47.619 4.80 0.00 36.09 3.53
3146 5072 1.213678 CAGCTCCATGAAGGGATTCCA 59.786 52.381 4.80 0.00 36.09 3.53
3147 5073 1.492176 TCAGCTCCATGAAGGGATTCC 59.508 52.381 0.00 0.00 36.09 3.01
3148 5074 2.172293 AGTCAGCTCCATGAAGGGATTC 59.828 50.000 0.00 0.00 36.09 2.52
3149 5075 2.172293 GAGTCAGCTCCATGAAGGGATT 59.828 50.000 0.00 0.00 36.09 3.01
3150 5076 1.767681 GAGTCAGCTCCATGAAGGGAT 59.232 52.381 0.00 0.00 36.09 3.85
3151 5077 1.198713 GAGTCAGCTCCATGAAGGGA 58.801 55.000 0.00 0.00 38.24 4.20
3152 5078 0.179089 CGAGTCAGCTCCATGAAGGG 60.179 60.000 0.00 0.00 38.49 3.95
3153 5079 0.179089 CCGAGTCAGCTCCATGAAGG 60.179 60.000 0.00 0.00 38.49 3.46
3154 5080 0.534412 ACCGAGTCAGCTCCATGAAG 59.466 55.000 0.00 0.00 38.49 3.02
3155 5081 0.247460 CACCGAGTCAGCTCCATGAA 59.753 55.000 0.00 0.00 38.49 2.57
3156 5082 1.607801 CCACCGAGTCAGCTCCATGA 61.608 60.000 0.00 0.00 38.49 3.07
3157 5083 1.153489 CCACCGAGTCAGCTCCATG 60.153 63.158 0.00 0.00 38.49 3.66
3158 5084 1.305297 TCCACCGAGTCAGCTCCAT 60.305 57.895 0.00 0.00 38.49 3.41
3159 5085 1.979155 CTCCACCGAGTCAGCTCCA 60.979 63.158 0.00 0.00 38.49 3.86
3160 5086 1.979693 ACTCCACCGAGTCAGCTCC 60.980 63.158 0.00 0.00 46.90 4.70
3161 5087 3.688086 ACTCCACCGAGTCAGCTC 58.312 61.111 0.00 0.00 46.90 4.09
3168 5094 1.133407 GAGCTCTACAACTCCACCGAG 59.867 57.143 6.43 0.00 42.32 4.63
3169 5095 1.174783 GAGCTCTACAACTCCACCGA 58.825 55.000 6.43 0.00 0.00 4.69
3170 5096 0.179161 CGAGCTCTACAACTCCACCG 60.179 60.000 12.85 0.00 0.00 4.94
3171 5097 0.173708 CCGAGCTCTACAACTCCACC 59.826 60.000 12.85 0.00 0.00 4.61
3172 5098 0.889306 ACCGAGCTCTACAACTCCAC 59.111 55.000 12.85 0.00 0.00 4.02
3173 5099 1.629043 AACCGAGCTCTACAACTCCA 58.371 50.000 12.85 0.00 0.00 3.86
3174 5100 2.745515 AAACCGAGCTCTACAACTCC 57.254 50.000 12.85 0.00 0.00 3.85
3175 5101 3.925299 GGTAAAACCGAGCTCTACAACTC 59.075 47.826 12.85 0.00 0.00 3.01
3176 5102 3.306571 GGGTAAAACCGAGCTCTACAACT 60.307 47.826 12.85 0.00 39.83 3.16
3177 5103 2.998670 GGGTAAAACCGAGCTCTACAAC 59.001 50.000 12.85 2.48 39.83 3.32
3178 5104 3.323751 GGGTAAAACCGAGCTCTACAA 57.676 47.619 12.85 0.00 39.83 2.41
3189 5115 4.514781 AATTTTCTGAGCGGGTAAAACC 57.485 40.909 0.00 0.00 37.60 3.27
3190 5116 5.093457 GCTAATTTTCTGAGCGGGTAAAAC 58.907 41.667 0.00 0.00 0.00 2.43
3191 5117 5.007682 AGCTAATTTTCTGAGCGGGTAAAA 58.992 37.500 0.00 0.00 41.23 1.52
3192 5118 4.585879 AGCTAATTTTCTGAGCGGGTAAA 58.414 39.130 0.00 0.00 41.23 2.01
3193 5119 4.216411 AGCTAATTTTCTGAGCGGGTAA 57.784 40.909 0.00 0.00 41.23 2.85
3194 5120 3.906720 AGCTAATTTTCTGAGCGGGTA 57.093 42.857 0.00 0.00 41.23 3.69
3195 5121 2.789409 AGCTAATTTTCTGAGCGGGT 57.211 45.000 0.00 0.00 41.23 5.28
3196 5122 3.531538 TGTAGCTAATTTTCTGAGCGGG 58.468 45.455 0.00 0.00 41.23 6.13
3197 5123 4.268884 GTCTGTAGCTAATTTTCTGAGCGG 59.731 45.833 0.00 0.00 41.23 5.52
3198 5124 5.105752 AGTCTGTAGCTAATTTTCTGAGCG 58.894 41.667 0.00 0.00 41.23 5.03
3199 5125 5.231147 CGAGTCTGTAGCTAATTTTCTGAGC 59.769 44.000 0.00 0.00 36.42 4.26
3200 5126 6.326375 ACGAGTCTGTAGCTAATTTTCTGAG 58.674 40.000 0.00 0.00 0.00 3.35
3201 5127 6.268825 ACGAGTCTGTAGCTAATTTTCTGA 57.731 37.500 0.00 0.00 0.00 3.27
3202 5128 5.517054 GGACGAGTCTGTAGCTAATTTTCTG 59.483 44.000 0.00 0.00 0.00 3.02
3203 5129 5.652518 GGACGAGTCTGTAGCTAATTTTCT 58.347 41.667 0.00 0.00 0.00 2.52
3204 5130 4.499758 CGGACGAGTCTGTAGCTAATTTTC 59.500 45.833 0.00 0.00 0.00 2.29
3205 5131 4.421948 CGGACGAGTCTGTAGCTAATTTT 58.578 43.478 0.00 0.00 0.00 1.82
3206 5132 3.734293 GCGGACGAGTCTGTAGCTAATTT 60.734 47.826 12.96 0.00 38.23 1.82
3207 5133 2.223525 GCGGACGAGTCTGTAGCTAATT 60.224 50.000 12.96 0.00 38.23 1.40
3208 5134 1.334243 GCGGACGAGTCTGTAGCTAAT 59.666 52.381 12.96 0.00 38.23 1.73
3209 5135 0.731417 GCGGACGAGTCTGTAGCTAA 59.269 55.000 12.96 0.00 38.23 3.09
3210 5136 0.107800 AGCGGACGAGTCTGTAGCTA 60.108 55.000 12.96 0.00 38.23 3.32
3211 5137 1.370587 GAGCGGACGAGTCTGTAGCT 61.371 60.000 12.96 12.75 38.23 3.32
3212 5138 1.062845 GAGCGGACGAGTCTGTAGC 59.937 63.158 12.96 8.94 38.23 3.58
3213 5139 1.722677 GGAGCGGACGAGTCTGTAG 59.277 63.158 12.96 0.44 38.23 2.74
3214 5140 2.104859 CGGAGCGGACGAGTCTGTA 61.105 63.158 12.96 0.00 38.23 2.74
3215 5141 3.432588 CGGAGCGGACGAGTCTGT 61.433 66.667 12.96 1.28 38.23 3.41
3233 5159 4.452733 CTCCCTGGACCGCGTTCC 62.453 72.222 16.82 16.82 36.03 3.62
3240 5166 3.151022 CTCTCCGCTCCCTGGACC 61.151 72.222 0.00 0.00 0.00 4.46
3241 5167 3.151022 CCTCTCCGCTCCCTGGAC 61.151 72.222 0.00 0.00 0.00 4.02
3242 5168 3.347590 TCCTCTCCGCTCCCTGGA 61.348 66.667 0.00 0.00 0.00 3.86
3243 5169 2.837291 CTCCTCTCCGCTCCCTGG 60.837 72.222 0.00 0.00 0.00 4.45
3244 5170 3.535962 GCTCCTCTCCGCTCCCTG 61.536 72.222 0.00 0.00 0.00 4.45
3245 5171 4.851214 GGCTCCTCTCCGCTCCCT 62.851 72.222 0.00 0.00 0.00 4.20
3247 5173 2.660064 TTTGGCTCCTCTCCGCTCC 61.660 63.158 0.00 0.00 0.00 4.70
3248 5174 1.448717 GTTTGGCTCCTCTCCGCTC 60.449 63.158 0.00 0.00 0.00 5.03
3249 5175 2.665603 GTTTGGCTCCTCTCCGCT 59.334 61.111 0.00 0.00 0.00 5.52
3250 5176 2.815647 CGTTTGGCTCCTCTCCGC 60.816 66.667 0.00 0.00 0.00 5.54
3251 5177 2.815647 GCGTTTGGCTCCTCTCCG 60.816 66.667 0.00 0.00 39.11 4.63
3252 5178 2.815647 CGCGTTTGGCTCCTCTCC 60.816 66.667 0.00 0.00 40.44 3.71
3253 5179 2.815647 CCGCGTTTGGCTCCTCTC 60.816 66.667 4.92 0.00 40.44 3.20
3261 5187 1.758319 CGTATGTAGGCCGCGTTTGG 61.758 60.000 4.92 0.00 0.00 3.28
3262 5188 0.802994 TCGTATGTAGGCCGCGTTTG 60.803 55.000 4.92 0.00 0.00 2.93
3263 5189 0.103572 ATCGTATGTAGGCCGCGTTT 59.896 50.000 4.92 0.00 0.00 3.60
3264 5190 0.953727 TATCGTATGTAGGCCGCGTT 59.046 50.000 4.92 0.00 0.00 4.84
3265 5191 0.239347 GTATCGTATGTAGGCCGCGT 59.761 55.000 4.92 0.00 0.00 6.01
3266 5192 0.520404 AGTATCGTATGTAGGCCGCG 59.480 55.000 0.00 0.00 0.00 6.46
3267 5193 1.135460 GGAGTATCGTATGTAGGCCGC 60.135 57.143 0.00 0.00 34.37 6.53
3268 5194 1.471684 GGGAGTATCGTATGTAGGCCG 59.528 57.143 0.00 0.00 34.37 6.13
3269 5195 2.522185 TGGGAGTATCGTATGTAGGCC 58.478 52.381 0.00 0.00 34.37 5.19
3270 5196 4.495422 CAATGGGAGTATCGTATGTAGGC 58.505 47.826 0.00 0.00 34.37 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.