Multiple sequence alignment - TraesCS5A01G354900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G354900 chr5A 100.000 4529 0 0 1 4529 557122836 557127364 0.000000e+00 8364.0
1 TraesCS5A01G354900 chr5A 86.877 381 41 4 136 508 287582788 287583167 7.010000e-113 418.0
2 TraesCS5A01G354900 chr5A 87.500 96 6 4 2506 2598 557125433 557125341 6.200000e-19 106.0
3 TraesCS5A01G354900 chr5A 100.000 29 0 0 572 600 119438216 119438244 2.000000e-03 54.7
4 TraesCS5A01G354900 chr5A 96.875 32 1 0 572 603 650496090 650496059 2.000000e-03 54.7
5 TraesCS5A01G354900 chr5B 92.865 3420 153 40 761 4143 536583584 536586949 0.000000e+00 4879.0
6 TraesCS5A01G354900 chr5B 94.872 390 13 2 4141 4529 536587030 536587413 1.800000e-168 603.0
7 TraesCS5A01G354900 chr5D 92.523 3210 143 51 981 4143 441017142 441020301 0.000000e+00 4508.0
8 TraesCS5A01G354900 chr5D 95.373 389 12 1 4141 4529 441020382 441020764 8.330000e-172 614.0
9 TraesCS5A01G354900 chr5D 87.805 369 37 5 151 512 491537161 491536794 4.190000e-115 425.0
10 TraesCS5A01G354900 chr5D 86.047 387 45 5 127 506 446308069 446307685 1.520000e-109 407.0
11 TraesCS5A01G354900 chr5D 96.277 188 4 2 761 946 441016553 441016739 5.690000e-79 305.0
12 TraesCS5A01G354900 chr5D 100.000 29 0 0 3359 3387 441019565 441019593 2.000000e-03 54.7
13 TraesCS5A01G354900 chr7D 88.021 384 33 5 136 506 179532048 179531665 4.160000e-120 442.0
14 TraesCS5A01G354900 chr7D 87.733 375 38 6 136 506 203039405 203039775 9.000000e-117 431.0
15 TraesCS5A01G354900 chr7D 86.649 382 34 10 136 506 496720573 496720948 1.520000e-109 407.0
16 TraesCS5A01G354900 chr7D 96.875 32 0 1 2572 2603 583556780 583556750 8.000000e-03 52.8
17 TraesCS5A01G354900 chr3A 86.822 387 37 9 134 509 725451950 725451567 1.950000e-113 420.0
18 TraesCS5A01G354900 chr4A 86.737 377 41 6 136 507 96314046 96314418 1.170000e-110 411.0
19 TraesCS5A01G354900 chr3D 86.047 387 47 5 134 515 590298287 590297903 4.220000e-110 409.0
20 TraesCS5A01G354900 chr2A 92.157 51 3 1 2549 2599 496391140 496391189 2.260000e-08 71.3
21 TraesCS5A01G354900 chr1A 95.349 43 2 0 2557 2599 49963200 49963242 8.130000e-08 69.4
22 TraesCS5A01G354900 chr2D 91.489 47 3 1 2558 2603 555933392 555933346 3.780000e-06 63.9
23 TraesCS5A01G354900 chr2B 91.489 47 3 1 2558 2603 662797637 662797591 3.780000e-06 63.9
24 TraesCS5A01G354900 chr6D 91.489 47 0 3 556 600 4684541 4684585 1.360000e-05 62.1
25 TraesCS5A01G354900 chr6B 86.792 53 6 1 2557 2608 501066300 501066248 1.760000e-04 58.4
26 TraesCS5A01G354900 chr4B 100.000 31 0 0 572 602 627709734 627709704 1.760000e-04 58.4
27 TraesCS5A01G354900 chr1B 100.000 29 0 0 572 600 169782331 169782303 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G354900 chr5A 557122836 557127364 4528 False 8364.000 8364 100.00000 1 4529 1 chr5A.!!$F3 4528
1 TraesCS5A01G354900 chr5B 536583584 536587413 3829 False 2741.000 4879 93.86850 761 4529 2 chr5B.!!$F1 3768
2 TraesCS5A01G354900 chr5D 441016553 441020764 4211 False 1370.425 4508 96.04325 761 4529 4 chr5D.!!$F1 3768

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
72 73 0.036732 TCAAAGGCACCTCGAAGCAT 59.963 50.000 6.51 0.00 0.00 3.79 F
75 76 0.036732 AAGGCACCTCGAAGCATCAA 59.963 50.000 6.51 0.00 0.00 2.57 F
372 373 0.036765 GTGGCGTGTATGGGAACTGA 60.037 55.000 0.00 0.00 0.00 3.41 F
442 443 0.038744 AGTGGTGGGCCTTTGATGAG 59.961 55.000 4.53 0.00 35.27 2.90 F
708 709 0.178975 TTTAACCTGTGGCCTGTGGG 60.179 55.000 3.32 3.56 0.00 4.61 F
729 730 0.179145 CGTACCAGTCCAAGTAGGCG 60.179 60.000 0.00 0.00 37.29 5.52 F
1229 1608 1.017177 TCGCCGCTGTATGTTGAACC 61.017 55.000 0.00 0.00 0.00 3.62 F
1488 1887 1.075374 AGCCATGACCAAGTTTGCCTA 59.925 47.619 0.00 0.00 0.00 3.93 F
3131 3550 0.396435 TGTACCTGTCCAGCCAACAG 59.604 55.000 4.23 4.23 43.04 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1809 2220 1.470112 GCCCTCTTCTCGTACAAGAGC 60.470 57.143 13.46 3.84 43.87 4.09 R
1818 2229 2.580867 CGAAGCGCCCTCTTCTCG 60.581 66.667 2.29 0.00 40.11 4.04 R
2105 2516 0.038310 AAGCTTACCCAGACAAGCCC 59.962 55.000 0.00 0.00 46.70 5.19 R
2258 2669 2.107552 TGGAAGATTTCGTCCCCAAAGT 59.892 45.455 9.59 0.00 42.72 2.66 R
2674 3090 5.048846 ACAAAAGGTGGACACTATTGACT 57.951 39.130 16.26 0.00 0.00 3.41 R
2675 3091 5.063880 AGACAAAAGGTGGACACTATTGAC 58.936 41.667 16.26 12.26 0.00 3.18 R
3093 3512 4.046938 ACAGTCGCATCCTTACATGTAG 57.953 45.455 5.56 0.93 0.00 2.74 R
3408 3830 7.917505 AGCTTTCAAGAATGTACAACAGAAAAG 59.082 33.333 0.00 7.50 0.00 2.27 R
4492 5006 0.542702 CCAGGTTCAAGGTGGCCAAT 60.543 55.000 7.24 0.00 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.979578 TTTGTCAAAGCTTTGTAATACATGATT 57.020 25.926 32.46 0.00 39.18 2.57
30 31 9.503427 GTCAAAGCTTTGTAATACATGATTACC 57.497 33.333 32.46 6.00 46.52 2.85
31 32 8.394877 TCAAAGCTTTGTAATACATGATTACCG 58.605 33.333 32.46 6.61 46.52 4.02
32 33 6.300354 AGCTTTGTAATACATGATTACCGC 57.700 37.500 17.76 16.70 46.52 5.68
33 34 5.820423 AGCTTTGTAATACATGATTACCGCA 59.180 36.000 17.76 6.59 46.52 5.69
34 35 6.317642 AGCTTTGTAATACATGATTACCGCAA 59.682 34.615 17.76 11.14 46.52 4.85
35 36 6.970043 GCTTTGTAATACATGATTACCGCAAA 59.030 34.615 17.76 13.20 46.52 3.68
36 37 7.165812 GCTTTGTAATACATGATTACCGCAAAG 59.834 37.037 17.76 18.64 46.52 2.77
37 38 7.618502 TTGTAATACATGATTACCGCAAAGT 57.381 32.000 17.76 0.00 46.52 2.66
38 39 7.618502 TGTAATACATGATTACCGCAAAGTT 57.381 32.000 17.76 0.00 46.52 2.66
39 40 8.046294 TGTAATACATGATTACCGCAAAGTTT 57.954 30.769 17.76 0.00 46.52 2.66
40 41 9.163899 TGTAATACATGATTACCGCAAAGTTTA 57.836 29.630 17.76 2.16 46.52 2.01
41 42 9.991388 GTAATACATGATTACCGCAAAGTTTAA 57.009 29.630 0.00 0.00 42.87 1.52
43 44 8.905103 ATACATGATTACCGCAAAGTTTAAAC 57.095 30.769 10.47 10.47 0.00 2.01
44 45 6.153756 ACATGATTACCGCAAAGTTTAAACC 58.846 36.000 14.72 0.00 0.00 3.27
45 46 6.015772 ACATGATTACCGCAAAGTTTAAACCT 60.016 34.615 14.72 0.00 0.00 3.50
46 47 6.004408 TGATTACCGCAAAGTTTAAACCTC 57.996 37.500 14.72 1.38 0.00 3.85
47 48 4.471157 TTACCGCAAAGTTTAAACCTCG 57.529 40.909 14.72 12.06 0.00 4.63
48 49 1.605232 ACCGCAAAGTTTAAACCTCGG 59.395 47.619 24.10 24.10 41.18 4.63
49 50 1.068816 CCGCAAAGTTTAAACCTCGGG 60.069 52.381 20.81 14.82 32.75 5.14
50 51 1.068816 CGCAAAGTTTAAACCTCGGGG 60.069 52.381 14.72 0.00 38.88 5.73
60 61 1.228459 ACCTCGGGGTTTCAAAGGC 60.228 57.895 0.00 0.00 44.73 4.35
61 62 1.228429 CCTCGGGGTTTCAAAGGCA 60.228 57.895 0.00 0.00 0.00 4.75
62 63 1.524008 CCTCGGGGTTTCAAAGGCAC 61.524 60.000 0.00 0.00 0.00 5.01
63 64 1.524008 CTCGGGGTTTCAAAGGCACC 61.524 60.000 0.00 0.00 0.00 5.01
64 65 1.530655 CGGGGTTTCAAAGGCACCT 60.531 57.895 0.00 0.00 0.00 4.00
65 66 1.524008 CGGGGTTTCAAAGGCACCTC 61.524 60.000 0.00 0.00 0.00 3.85
66 67 1.524008 GGGGTTTCAAAGGCACCTCG 61.524 60.000 0.00 0.00 0.00 4.63
67 68 0.536460 GGGTTTCAAAGGCACCTCGA 60.536 55.000 0.00 0.00 0.00 4.04
68 69 1.314730 GGTTTCAAAGGCACCTCGAA 58.685 50.000 0.00 0.00 0.00 3.71
69 70 1.266989 GGTTTCAAAGGCACCTCGAAG 59.733 52.381 0.00 0.00 0.00 3.79
70 71 0.951558 TTTCAAAGGCACCTCGAAGC 59.048 50.000 0.00 0.00 0.00 3.86
71 72 0.179032 TTCAAAGGCACCTCGAAGCA 60.179 50.000 6.51 0.00 0.00 3.91
72 73 0.036732 TCAAAGGCACCTCGAAGCAT 59.963 50.000 6.51 0.00 0.00 3.79
73 74 0.449388 CAAAGGCACCTCGAAGCATC 59.551 55.000 6.51 0.00 0.00 3.91
74 75 0.036732 AAAGGCACCTCGAAGCATCA 59.963 50.000 6.51 0.00 0.00 3.07
75 76 0.036732 AAGGCACCTCGAAGCATCAA 59.963 50.000 6.51 0.00 0.00 2.57
76 77 0.674895 AGGCACCTCGAAGCATCAAC 60.675 55.000 6.51 0.00 0.00 3.18
77 78 0.955428 GGCACCTCGAAGCATCAACA 60.955 55.000 6.51 0.00 0.00 3.33
78 79 0.874390 GCACCTCGAAGCATCAACAA 59.126 50.000 0.00 0.00 0.00 2.83
79 80 1.266718 GCACCTCGAAGCATCAACAAA 59.733 47.619 0.00 0.00 0.00 2.83
80 81 2.287547 GCACCTCGAAGCATCAACAAAA 60.288 45.455 0.00 0.00 0.00 2.44
81 82 3.612479 GCACCTCGAAGCATCAACAAAAT 60.612 43.478 0.00 0.00 0.00 1.82
82 83 3.916172 CACCTCGAAGCATCAACAAAATG 59.084 43.478 0.00 0.00 0.00 2.32
83 84 3.057315 ACCTCGAAGCATCAACAAAATGG 60.057 43.478 0.00 0.00 0.00 3.16
84 85 3.057315 CCTCGAAGCATCAACAAAATGGT 60.057 43.478 0.00 0.00 36.45 3.55
85 86 4.155826 CCTCGAAGCATCAACAAAATGGTA 59.844 41.667 0.00 0.00 33.93 3.25
86 87 5.295431 TCGAAGCATCAACAAAATGGTAG 57.705 39.130 0.00 0.00 33.93 3.18
87 88 5.000591 TCGAAGCATCAACAAAATGGTAGA 58.999 37.500 0.00 0.00 33.93 2.59
88 89 5.122239 TCGAAGCATCAACAAAATGGTAGAG 59.878 40.000 0.00 0.00 33.93 2.43
89 90 5.106555 CGAAGCATCAACAAAATGGTAGAGT 60.107 40.000 0.00 0.00 33.93 3.24
90 91 6.092122 CGAAGCATCAACAAAATGGTAGAGTA 59.908 38.462 0.00 0.00 33.93 2.59
91 92 6.992063 AGCATCAACAAAATGGTAGAGTAG 57.008 37.500 0.00 0.00 33.32 2.57
92 93 5.882557 AGCATCAACAAAATGGTAGAGTAGG 59.117 40.000 0.00 0.00 33.32 3.18
93 94 5.648092 GCATCAACAAAATGGTAGAGTAGGT 59.352 40.000 0.00 0.00 0.00 3.08
94 95 6.151144 GCATCAACAAAATGGTAGAGTAGGTT 59.849 38.462 0.00 0.00 0.00 3.50
95 96 7.530010 CATCAACAAAATGGTAGAGTAGGTTG 58.470 38.462 0.00 0.00 35.63 3.77
96 97 6.833041 TCAACAAAATGGTAGAGTAGGTTGA 58.167 36.000 0.00 0.00 39.56 3.18
97 98 7.284074 TCAACAAAATGGTAGAGTAGGTTGAA 58.716 34.615 0.00 0.00 39.09 2.69
98 99 7.942341 TCAACAAAATGGTAGAGTAGGTTGAAT 59.058 33.333 0.00 0.00 39.09 2.57
99 100 8.576442 CAACAAAATGGTAGAGTAGGTTGAATT 58.424 33.333 0.00 0.00 36.19 2.17
100 101 8.110860 ACAAAATGGTAGAGTAGGTTGAATTG 57.889 34.615 0.00 0.00 0.00 2.32
101 102 7.942341 ACAAAATGGTAGAGTAGGTTGAATTGA 59.058 33.333 0.00 0.00 0.00 2.57
102 103 8.792633 CAAAATGGTAGAGTAGGTTGAATTGAA 58.207 33.333 0.00 0.00 0.00 2.69
103 104 8.934023 AAATGGTAGAGTAGGTTGAATTGAAA 57.066 30.769 0.00 0.00 0.00 2.69
104 105 8.567285 AATGGTAGAGTAGGTTGAATTGAAAG 57.433 34.615 0.00 0.00 0.00 2.62
105 106 7.311092 TGGTAGAGTAGGTTGAATTGAAAGA 57.689 36.000 0.00 0.00 0.00 2.52
106 107 7.741785 TGGTAGAGTAGGTTGAATTGAAAGAA 58.258 34.615 0.00 0.00 0.00 2.52
107 108 7.660208 TGGTAGAGTAGGTTGAATTGAAAGAAC 59.340 37.037 0.00 0.00 0.00 3.01
108 109 7.119407 GGTAGAGTAGGTTGAATTGAAAGAACC 59.881 40.741 0.00 0.00 38.54 3.62
109 110 5.701290 AGAGTAGGTTGAATTGAAAGAACCG 59.299 40.000 0.00 0.00 42.34 4.44
110 111 4.760204 AGTAGGTTGAATTGAAAGAACCGG 59.240 41.667 0.00 0.00 42.34 5.28
111 112 2.890945 AGGTTGAATTGAAAGAACCGGG 59.109 45.455 6.32 0.00 42.34 5.73
112 113 2.888414 GGTTGAATTGAAAGAACCGGGA 59.112 45.455 6.32 0.00 0.00 5.14
113 114 3.057526 GGTTGAATTGAAAGAACCGGGAG 60.058 47.826 6.32 0.00 0.00 4.30
114 115 2.159382 TGAATTGAAAGAACCGGGAGC 58.841 47.619 6.32 0.00 0.00 4.70
115 116 2.159382 GAATTGAAAGAACCGGGAGCA 58.841 47.619 6.32 0.00 0.00 4.26
116 117 2.286365 ATTGAAAGAACCGGGAGCAA 57.714 45.000 6.32 1.47 0.00 3.91
117 118 1.604604 TTGAAAGAACCGGGAGCAAG 58.395 50.000 6.32 0.00 0.00 4.01
118 119 0.762418 TGAAAGAACCGGGAGCAAGA 59.238 50.000 6.32 0.00 0.00 3.02
119 120 1.142060 TGAAAGAACCGGGAGCAAGAA 59.858 47.619 6.32 0.00 0.00 2.52
120 121 2.227194 GAAAGAACCGGGAGCAAGAAA 58.773 47.619 6.32 0.00 0.00 2.52
121 122 1.897560 AAGAACCGGGAGCAAGAAAG 58.102 50.000 6.32 0.00 0.00 2.62
122 123 0.036875 AGAACCGGGAGCAAGAAAGG 59.963 55.000 6.32 0.00 0.00 3.11
123 124 1.587043 GAACCGGGAGCAAGAAAGGC 61.587 60.000 6.32 0.00 0.00 4.35
124 125 2.069165 AACCGGGAGCAAGAAAGGCT 62.069 55.000 6.32 0.00 46.07 4.58
130 131 3.706055 AGCAAGAAAGGCTCGTTGA 57.294 47.368 7.43 0.00 36.81 3.18
131 132 1.517242 AGCAAGAAAGGCTCGTTGAG 58.483 50.000 7.43 0.00 36.81 3.02
132 133 0.519077 GCAAGAAAGGCTCGTTGAGG 59.481 55.000 7.43 0.00 0.00 3.86
133 134 1.878102 GCAAGAAAGGCTCGTTGAGGA 60.878 52.381 7.43 0.00 0.00 3.71
134 135 2.704572 CAAGAAAGGCTCGTTGAGGAT 58.295 47.619 0.00 0.00 0.00 3.24
135 136 3.861840 CAAGAAAGGCTCGTTGAGGATA 58.138 45.455 0.00 0.00 0.00 2.59
136 137 3.528597 AGAAAGGCTCGTTGAGGATAC 57.471 47.619 0.00 0.00 0.00 2.24
152 153 4.564940 GGATACTAGATAATACCCGGCG 57.435 50.000 0.00 0.00 0.00 6.46
153 154 4.202441 GGATACTAGATAATACCCGGCGA 58.798 47.826 9.30 0.00 0.00 5.54
154 155 4.275443 GGATACTAGATAATACCCGGCGAG 59.725 50.000 9.30 0.00 0.00 5.03
155 156 3.151912 ACTAGATAATACCCGGCGAGT 57.848 47.619 9.30 2.81 0.00 4.18
156 157 3.494332 ACTAGATAATACCCGGCGAGTT 58.506 45.455 9.30 0.00 0.00 3.01
157 158 2.814280 AGATAATACCCGGCGAGTTG 57.186 50.000 9.30 0.00 0.00 3.16
158 159 1.145803 GATAATACCCGGCGAGTTGC 58.854 55.000 9.30 0.00 45.38 4.17
167 168 3.843240 GCGAGTTGCCGCGAGAAG 61.843 66.667 8.23 0.00 45.86 2.85
168 169 3.181967 CGAGTTGCCGCGAGAAGG 61.182 66.667 8.23 0.00 35.78 3.46
169 170 2.261671 GAGTTGCCGCGAGAAGGA 59.738 61.111 8.23 0.00 0.00 3.36
170 171 1.374252 GAGTTGCCGCGAGAAGGAA 60.374 57.895 8.23 0.00 0.00 3.36
171 172 0.741221 GAGTTGCCGCGAGAAGGAAT 60.741 55.000 8.23 0.00 0.00 3.01
172 173 0.321653 AGTTGCCGCGAGAAGGAATT 60.322 50.000 8.23 0.00 0.00 2.17
173 174 0.179189 GTTGCCGCGAGAAGGAATTG 60.179 55.000 8.23 0.00 0.00 2.32
174 175 1.922135 TTGCCGCGAGAAGGAATTGC 61.922 55.000 8.23 0.00 0.00 3.56
175 176 2.398554 GCCGCGAGAAGGAATTGCA 61.399 57.895 8.23 0.00 0.00 4.08
176 177 1.922135 GCCGCGAGAAGGAATTGCAA 61.922 55.000 8.23 0.00 0.00 4.08
177 178 0.734889 CCGCGAGAAGGAATTGCAAT 59.265 50.000 8.23 5.99 0.00 3.56
178 179 1.939934 CCGCGAGAAGGAATTGCAATA 59.060 47.619 13.39 0.00 0.00 1.90
179 180 2.549754 CCGCGAGAAGGAATTGCAATAT 59.450 45.455 13.39 3.02 0.00 1.28
180 181 3.745975 CCGCGAGAAGGAATTGCAATATA 59.254 43.478 13.39 0.00 0.00 0.86
181 182 4.393062 CCGCGAGAAGGAATTGCAATATAT 59.607 41.667 13.39 0.00 0.00 0.86
182 183 5.106555 CCGCGAGAAGGAATTGCAATATATT 60.107 40.000 13.39 7.46 0.00 1.28
183 184 6.373779 CGCGAGAAGGAATTGCAATATATTT 58.626 36.000 13.39 5.31 0.00 1.40
184 185 6.521133 CGCGAGAAGGAATTGCAATATATTTC 59.479 38.462 13.39 13.54 0.00 2.17
185 186 7.362662 GCGAGAAGGAATTGCAATATATTTCA 58.637 34.615 13.39 0.00 0.00 2.69
186 187 7.536622 GCGAGAAGGAATTGCAATATATTTCAG 59.463 37.037 13.39 12.38 0.00 3.02
187 188 8.562892 CGAGAAGGAATTGCAATATATTTCAGT 58.437 33.333 13.39 0.00 0.00 3.41
188 189 9.674824 GAGAAGGAATTGCAATATATTTCAGTG 57.325 33.333 13.39 0.00 0.00 3.66
189 190 9.412460 AGAAGGAATTGCAATATATTTCAGTGA 57.588 29.630 13.39 0.00 0.00 3.41
197 198 9.667989 TTGCAATATATTTCAGTGATTTGATCG 57.332 29.630 0.00 0.00 0.00 3.69
198 199 8.839343 TGCAATATATTTCAGTGATTTGATCGT 58.161 29.630 0.00 0.00 0.00 3.73
202 203 9.908152 ATATATTTCAGTGATTTGATCGTACGA 57.092 29.630 21.93 21.93 0.00 3.43
203 204 6.961359 ATTTCAGTGATTTGATCGTACGAA 57.039 33.333 23.56 5.87 0.00 3.85
204 205 6.389622 TTTCAGTGATTTGATCGTACGAAG 57.610 37.500 23.56 2.71 0.00 3.79
205 206 3.857665 TCAGTGATTTGATCGTACGAAGC 59.142 43.478 23.56 17.31 0.00 3.86
206 207 3.859961 CAGTGATTTGATCGTACGAAGCT 59.140 43.478 23.56 5.69 0.00 3.74
207 208 4.327357 CAGTGATTTGATCGTACGAAGCTT 59.673 41.667 23.56 5.25 0.00 3.74
208 209 4.563184 AGTGATTTGATCGTACGAAGCTTC 59.437 41.667 23.56 16.84 0.00 3.86
209 210 4.563184 GTGATTTGATCGTACGAAGCTTCT 59.437 41.667 23.56 13.16 0.00 2.85
210 211 5.742453 GTGATTTGATCGTACGAAGCTTCTA 59.258 40.000 23.56 9.26 0.00 2.10
211 212 6.418226 GTGATTTGATCGTACGAAGCTTCTAT 59.582 38.462 23.56 14.09 0.00 1.98
212 213 6.978659 TGATTTGATCGTACGAAGCTTCTATT 59.021 34.615 23.56 8.36 0.00 1.73
213 214 6.569228 TTTGATCGTACGAAGCTTCTATTG 57.431 37.500 23.56 10.84 0.00 1.90
214 215 5.244785 TGATCGTACGAAGCTTCTATTGT 57.755 39.130 23.56 15.87 0.00 2.71
215 216 5.647589 TGATCGTACGAAGCTTCTATTGTT 58.352 37.500 23.56 0.00 0.00 2.83
216 217 5.515270 TGATCGTACGAAGCTTCTATTGTTG 59.485 40.000 23.56 9.07 0.00 3.33
217 218 5.050644 TCGTACGAAGCTTCTATTGTTGA 57.949 39.130 23.50 12.13 0.00 3.18
218 219 5.463286 TCGTACGAAGCTTCTATTGTTGAA 58.537 37.500 23.50 0.00 0.00 2.69
219 220 6.097356 TCGTACGAAGCTTCTATTGTTGAAT 58.903 36.000 23.50 0.14 0.00 2.57
220 221 6.588756 TCGTACGAAGCTTCTATTGTTGAATT 59.411 34.615 23.50 0.00 0.00 2.17
221 222 7.756272 TCGTACGAAGCTTCTATTGTTGAATTA 59.244 33.333 23.50 0.00 0.00 1.40
222 223 8.377681 CGTACGAAGCTTCTATTGTTGAATTAA 58.622 33.333 23.50 0.00 0.00 1.40
285 286 8.684386 TTGGAATTGATTGTGTAGTTAGAACA 57.316 30.769 0.00 0.00 0.00 3.18
286 287 8.862325 TGGAATTGATTGTGTAGTTAGAACAT 57.138 30.769 0.00 0.00 0.00 2.71
287 288 9.952030 TGGAATTGATTGTGTAGTTAGAACATA 57.048 29.630 0.00 0.00 0.00 2.29
316 317 8.317891 TGAATATAAGTGGCATAACGTAATGG 57.682 34.615 0.00 0.00 0.00 3.16
317 318 8.151596 TGAATATAAGTGGCATAACGTAATGGA 58.848 33.333 0.00 0.00 0.00 3.41
318 319 9.162764 GAATATAAGTGGCATAACGTAATGGAT 57.837 33.333 0.00 0.00 0.00 3.41
319 320 9.515226 AATATAAGTGGCATAACGTAATGGATT 57.485 29.630 0.00 0.00 0.00 3.01
320 321 7.817418 ATAAGTGGCATAACGTAATGGATTT 57.183 32.000 0.00 0.00 0.00 2.17
321 322 6.524101 AAGTGGCATAACGTAATGGATTTT 57.476 33.333 0.00 0.00 0.00 1.82
322 323 6.524101 AGTGGCATAACGTAATGGATTTTT 57.476 33.333 0.00 0.00 0.00 1.94
340 341 2.350899 TTTTCATGCATGTTGAGCGG 57.649 45.000 25.43 0.00 33.85 5.52
341 342 1.532523 TTTCATGCATGTTGAGCGGA 58.467 45.000 25.43 1.24 33.85 5.54
342 343 0.804364 TTCATGCATGTTGAGCGGAC 59.196 50.000 25.43 0.00 33.85 4.79
343 344 1.026182 TCATGCATGTTGAGCGGACC 61.026 55.000 25.43 0.00 33.85 4.46
344 345 1.028330 CATGCATGTTGAGCGGACCT 61.028 55.000 18.91 0.00 33.85 3.85
345 346 0.322816 ATGCATGTTGAGCGGACCTT 60.323 50.000 0.00 0.00 33.85 3.50
346 347 0.537143 TGCATGTTGAGCGGACCTTT 60.537 50.000 0.00 0.00 33.85 3.11
347 348 0.109597 GCATGTTGAGCGGACCTTTG 60.110 55.000 0.00 0.00 0.00 2.77
348 349 1.522668 CATGTTGAGCGGACCTTTGA 58.477 50.000 0.00 0.00 0.00 2.69
349 350 2.086869 CATGTTGAGCGGACCTTTGAT 58.913 47.619 0.00 0.00 0.00 2.57
350 351 1.522668 TGTTGAGCGGACCTTTGATG 58.477 50.000 0.00 0.00 0.00 3.07
351 352 1.071542 TGTTGAGCGGACCTTTGATGA 59.928 47.619 0.00 0.00 0.00 2.92
352 353 1.734465 GTTGAGCGGACCTTTGATGAG 59.266 52.381 0.00 0.00 0.00 2.90
353 354 0.250234 TGAGCGGACCTTTGATGAGG 59.750 55.000 0.00 0.00 42.75 3.86
359 360 4.722193 CCTTTGATGAGGTGGCGT 57.278 55.556 0.00 0.00 31.89 5.68
360 361 2.174334 CCTTTGATGAGGTGGCGTG 58.826 57.895 0.00 0.00 31.89 5.34
361 362 0.606401 CCTTTGATGAGGTGGCGTGT 60.606 55.000 0.00 0.00 31.89 4.49
362 363 1.338674 CCTTTGATGAGGTGGCGTGTA 60.339 52.381 0.00 0.00 31.89 2.90
363 364 2.632377 CTTTGATGAGGTGGCGTGTAT 58.368 47.619 0.00 0.00 0.00 2.29
364 365 2.022764 TTGATGAGGTGGCGTGTATG 57.977 50.000 0.00 0.00 0.00 2.39
365 366 0.177836 TGATGAGGTGGCGTGTATGG 59.822 55.000 0.00 0.00 0.00 2.74
366 367 0.532862 GATGAGGTGGCGTGTATGGG 60.533 60.000 0.00 0.00 0.00 4.00
367 368 0.980754 ATGAGGTGGCGTGTATGGGA 60.981 55.000 0.00 0.00 0.00 4.37
368 369 1.195442 TGAGGTGGCGTGTATGGGAA 61.195 55.000 0.00 0.00 0.00 3.97
369 370 0.743345 GAGGTGGCGTGTATGGGAAC 60.743 60.000 0.00 0.00 0.00 3.62
370 371 1.198759 AGGTGGCGTGTATGGGAACT 61.199 55.000 0.00 0.00 0.00 3.01
371 372 1.024579 GGTGGCGTGTATGGGAACTG 61.025 60.000 0.00 0.00 0.00 3.16
372 373 0.036765 GTGGCGTGTATGGGAACTGA 60.037 55.000 0.00 0.00 0.00 3.41
373 374 0.687920 TGGCGTGTATGGGAACTGAA 59.312 50.000 0.00 0.00 0.00 3.02
374 375 1.072489 TGGCGTGTATGGGAACTGAAA 59.928 47.619 0.00 0.00 0.00 2.69
375 376 2.156098 GGCGTGTATGGGAACTGAAAA 58.844 47.619 0.00 0.00 0.00 2.29
376 377 2.161609 GGCGTGTATGGGAACTGAAAAG 59.838 50.000 0.00 0.00 0.00 2.27
377 378 2.161609 GCGTGTATGGGAACTGAAAAGG 59.838 50.000 0.00 0.00 0.00 3.11
378 379 2.747446 CGTGTATGGGAACTGAAAAGGG 59.253 50.000 0.00 0.00 0.00 3.95
379 380 3.763057 GTGTATGGGAACTGAAAAGGGT 58.237 45.455 0.00 0.00 0.00 4.34
380 381 3.506067 GTGTATGGGAACTGAAAAGGGTG 59.494 47.826 0.00 0.00 0.00 4.61
381 382 1.632589 ATGGGAACTGAAAAGGGTGC 58.367 50.000 0.00 0.00 0.00 5.01
382 383 0.260230 TGGGAACTGAAAAGGGTGCA 59.740 50.000 0.00 0.00 0.00 4.57
383 384 1.133199 TGGGAACTGAAAAGGGTGCAT 60.133 47.619 0.00 0.00 0.00 3.96
384 385 1.273327 GGGAACTGAAAAGGGTGCATG 59.727 52.381 0.00 0.00 0.00 4.06
385 386 2.238521 GGAACTGAAAAGGGTGCATGA 58.761 47.619 0.00 0.00 0.00 3.07
386 387 2.229784 GGAACTGAAAAGGGTGCATGAG 59.770 50.000 0.00 0.00 0.00 2.90
387 388 2.957402 ACTGAAAAGGGTGCATGAGA 57.043 45.000 0.00 0.00 0.00 3.27
388 389 3.446442 ACTGAAAAGGGTGCATGAGAT 57.554 42.857 0.00 0.00 0.00 2.75
389 390 3.350833 ACTGAAAAGGGTGCATGAGATC 58.649 45.455 0.00 0.00 0.00 2.75
390 391 3.245016 ACTGAAAAGGGTGCATGAGATCA 60.245 43.478 0.00 0.00 0.00 2.92
391 392 3.760151 CTGAAAAGGGTGCATGAGATCAA 59.240 43.478 0.00 0.00 0.00 2.57
392 393 4.346730 TGAAAAGGGTGCATGAGATCAAT 58.653 39.130 0.00 0.00 0.00 2.57
393 394 4.773674 TGAAAAGGGTGCATGAGATCAATT 59.226 37.500 0.00 0.00 0.00 2.32
394 395 5.951148 TGAAAAGGGTGCATGAGATCAATTA 59.049 36.000 0.00 0.00 0.00 1.40
395 396 6.436847 TGAAAAGGGTGCATGAGATCAATTAA 59.563 34.615 0.00 0.00 0.00 1.40
396 397 7.124599 TGAAAAGGGTGCATGAGATCAATTAAT 59.875 33.333 0.00 0.00 0.00 1.40
397 398 8.537728 AAAAGGGTGCATGAGATCAATTAATA 57.462 30.769 0.00 0.00 0.00 0.98
398 399 8.537728 AAAGGGTGCATGAGATCAATTAATAA 57.462 30.769 0.00 0.00 0.00 1.40
399 400 8.716674 AAGGGTGCATGAGATCAATTAATAAT 57.283 30.769 0.00 0.00 0.00 1.28
400 401 8.118976 AGGGTGCATGAGATCAATTAATAATG 57.881 34.615 0.00 0.00 0.00 1.90
401 402 7.177921 AGGGTGCATGAGATCAATTAATAATGG 59.822 37.037 0.00 0.00 0.00 3.16
402 403 7.177216 GGGTGCATGAGATCAATTAATAATGGA 59.823 37.037 0.00 0.00 0.00 3.41
403 404 8.579006 GGTGCATGAGATCAATTAATAATGGAA 58.421 33.333 0.00 0.00 0.00 3.53
404 405 9.970395 GTGCATGAGATCAATTAATAATGGAAA 57.030 29.630 0.00 0.00 0.00 3.13
414 415 9.651913 TCAATTAATAATGGAAAACTTTGCCTC 57.348 29.630 0.00 0.00 0.00 4.70
415 416 9.434420 CAATTAATAATGGAAAACTTTGCCTCA 57.566 29.630 0.00 0.00 0.00 3.86
417 418 9.603921 ATTAATAATGGAAAACTTTGCCTCATG 57.396 29.630 0.00 0.00 0.00 3.07
418 419 2.818130 TGGAAAACTTTGCCTCATGC 57.182 45.000 0.00 0.00 41.77 4.06
428 429 3.483954 GCCTCATGCATGTAGTGGT 57.516 52.632 25.43 0.00 40.77 4.16
429 430 1.019673 GCCTCATGCATGTAGTGGTG 58.980 55.000 25.43 10.10 40.77 4.17
430 431 1.671979 CCTCATGCATGTAGTGGTGG 58.328 55.000 25.43 13.05 0.00 4.61
431 432 1.671979 CTCATGCATGTAGTGGTGGG 58.328 55.000 25.43 0.00 0.00 4.61
432 433 0.394216 TCATGCATGTAGTGGTGGGC 60.394 55.000 25.43 0.00 0.00 5.36
433 434 1.076777 ATGCATGTAGTGGTGGGCC 60.077 57.895 0.00 0.00 0.00 5.80
434 435 1.574526 ATGCATGTAGTGGTGGGCCT 61.575 55.000 4.53 0.00 35.27 5.19
435 436 1.000896 GCATGTAGTGGTGGGCCTT 60.001 57.895 4.53 0.00 35.27 4.35
436 437 0.611896 GCATGTAGTGGTGGGCCTTT 60.612 55.000 4.53 0.00 35.27 3.11
437 438 1.176527 CATGTAGTGGTGGGCCTTTG 58.823 55.000 4.53 0.00 35.27 2.77
438 439 1.072266 ATGTAGTGGTGGGCCTTTGA 58.928 50.000 4.53 0.00 35.27 2.69
439 440 1.072266 TGTAGTGGTGGGCCTTTGAT 58.928 50.000 4.53 0.00 35.27 2.57
440 441 1.271871 TGTAGTGGTGGGCCTTTGATG 60.272 52.381 4.53 0.00 35.27 3.07
441 442 1.004277 GTAGTGGTGGGCCTTTGATGA 59.996 52.381 4.53 0.00 35.27 2.92
442 443 0.038744 AGTGGTGGGCCTTTGATGAG 59.961 55.000 4.53 0.00 35.27 2.90
443 444 0.967380 GTGGTGGGCCTTTGATGAGG 60.967 60.000 4.53 0.00 39.93 3.86
444 445 1.384191 GGTGGGCCTTTGATGAGGT 59.616 57.895 4.53 0.00 39.11 3.85
445 446 0.967380 GGTGGGCCTTTGATGAGGTG 60.967 60.000 4.53 0.00 39.11 4.00
446 447 0.967380 GTGGGCCTTTGATGAGGTGG 60.967 60.000 4.53 0.00 39.11 4.61
447 448 2.054453 GGGCCTTTGATGAGGTGGC 61.054 63.158 0.84 0.00 42.56 5.01
448 449 1.304381 GGCCTTTGATGAGGTGGCA 60.304 57.895 0.00 0.00 44.85 4.92
449 450 0.685458 GGCCTTTGATGAGGTGGCAT 60.685 55.000 0.00 0.00 44.85 4.40
450 451 0.458669 GCCTTTGATGAGGTGGCATG 59.541 55.000 0.00 0.00 42.79 4.06
451 452 1.843368 CCTTTGATGAGGTGGCATGT 58.157 50.000 0.00 0.00 31.89 3.21
452 453 1.475280 CCTTTGATGAGGTGGCATGTG 59.525 52.381 0.00 0.00 31.89 3.21
453 454 2.165167 CTTTGATGAGGTGGCATGTGT 58.835 47.619 0.00 0.00 0.00 3.72
454 455 1.536940 TTGATGAGGTGGCATGTGTG 58.463 50.000 0.00 0.00 0.00 3.82
472 473 6.682423 TGTGTGCATGTTGAGATAAATAGG 57.318 37.500 0.00 0.00 0.00 2.57
473 474 6.413892 TGTGTGCATGTTGAGATAAATAGGA 58.586 36.000 0.00 0.00 0.00 2.94
474 475 7.056006 TGTGTGCATGTTGAGATAAATAGGAT 58.944 34.615 0.00 0.00 0.00 3.24
475 476 8.210265 TGTGTGCATGTTGAGATAAATAGGATA 58.790 33.333 0.00 0.00 0.00 2.59
476 477 8.715998 GTGTGCATGTTGAGATAAATAGGATAG 58.284 37.037 0.00 0.00 0.00 2.08
477 478 8.432013 TGTGCATGTTGAGATAAATAGGATAGT 58.568 33.333 0.00 0.00 0.00 2.12
478 479 8.715998 GTGCATGTTGAGATAAATAGGATAGTG 58.284 37.037 0.00 0.00 0.00 2.74
479 480 7.879677 TGCATGTTGAGATAAATAGGATAGTGG 59.120 37.037 0.00 0.00 0.00 4.00
480 481 7.335422 GCATGTTGAGATAAATAGGATAGTGGG 59.665 40.741 0.00 0.00 0.00 4.61
481 482 7.316393 TGTTGAGATAAATAGGATAGTGGGG 57.684 40.000 0.00 0.00 0.00 4.96
482 483 7.079700 TGTTGAGATAAATAGGATAGTGGGGA 58.920 38.462 0.00 0.00 0.00 4.81
483 484 7.739444 TGTTGAGATAAATAGGATAGTGGGGAT 59.261 37.037 0.00 0.00 0.00 3.85
484 485 7.979786 TGAGATAAATAGGATAGTGGGGATC 57.020 40.000 0.00 0.00 0.00 3.36
485 486 7.487338 TGAGATAAATAGGATAGTGGGGATCA 58.513 38.462 0.00 0.00 0.00 2.92
486 487 7.961431 TGAGATAAATAGGATAGTGGGGATCAA 59.039 37.037 0.00 0.00 0.00 2.57
487 488 8.152023 AGATAAATAGGATAGTGGGGATCAAC 57.848 38.462 0.00 0.00 0.00 3.18
488 489 7.964293 AGATAAATAGGATAGTGGGGATCAACT 59.036 37.037 0.00 0.00 0.00 3.16
489 490 6.848562 AAATAGGATAGTGGGGATCAACTT 57.151 37.500 0.00 0.00 0.00 2.66
490 491 6.441088 AATAGGATAGTGGGGATCAACTTC 57.559 41.667 0.00 0.00 0.00 3.01
491 492 4.014273 AGGATAGTGGGGATCAACTTCT 57.986 45.455 0.00 0.00 0.00 2.85
492 493 4.375313 AGGATAGTGGGGATCAACTTCTT 58.625 43.478 0.00 0.00 0.00 2.52
493 494 5.538877 AGGATAGTGGGGATCAACTTCTTA 58.461 41.667 0.00 0.00 0.00 2.10
494 495 6.153924 AGGATAGTGGGGATCAACTTCTTAT 58.846 40.000 0.00 0.00 0.00 1.73
495 496 6.043706 AGGATAGTGGGGATCAACTTCTTATG 59.956 42.308 0.00 0.00 0.00 1.90
496 497 6.183361 GGATAGTGGGGATCAACTTCTTATGT 60.183 42.308 0.00 0.00 0.00 2.29
497 498 7.016268 GGATAGTGGGGATCAACTTCTTATGTA 59.984 40.741 0.00 0.00 0.00 2.29
498 499 6.831664 AGTGGGGATCAACTTCTTATGTAT 57.168 37.500 0.00 0.00 0.00 2.29
499 500 7.931015 AGTGGGGATCAACTTCTTATGTATA 57.069 36.000 0.00 0.00 0.00 1.47
500 501 8.511748 AGTGGGGATCAACTTCTTATGTATAT 57.488 34.615 0.00 0.00 0.00 0.86
501 502 9.615660 AGTGGGGATCAACTTCTTATGTATATA 57.384 33.333 0.00 0.00 0.00 0.86
502 503 9.877178 GTGGGGATCAACTTCTTATGTATATAG 57.123 37.037 0.00 0.00 0.00 1.31
503 504 9.046846 TGGGGATCAACTTCTTATGTATATAGG 57.953 37.037 0.00 0.00 0.00 2.57
504 505 9.268282 GGGGATCAACTTCTTATGTATATAGGA 57.732 37.037 0.00 0.00 0.00 2.94
527 528 8.917546 AGGATATAGGATAAGGGAGTTAAGACT 58.082 37.037 0.00 0.00 39.32 3.24
528 529 9.549984 GGATATAGGATAAGGGAGTTAAGACTT 57.450 37.037 0.00 0.00 35.88 3.01
532 533 7.901283 AGGATAAGGGAGTTAAGACTTACTC 57.099 40.000 12.64 12.64 40.00 2.59
533 534 6.546772 AGGATAAGGGAGTTAAGACTTACTCG 59.453 42.308 13.79 0.00 41.30 4.18
534 535 6.320926 GGATAAGGGAGTTAAGACTTACTCGT 59.679 42.308 13.79 8.03 41.30 4.18
535 536 7.147932 GGATAAGGGAGTTAAGACTTACTCGTT 60.148 40.741 13.79 12.50 41.30 3.85
536 537 8.814038 ATAAGGGAGTTAAGACTTACTCGTTA 57.186 34.615 13.79 13.54 41.30 3.18
537 538 6.756299 AGGGAGTTAAGACTTACTCGTTAG 57.244 41.667 13.79 0.00 41.30 2.34
538 539 6.479884 AGGGAGTTAAGACTTACTCGTTAGA 58.520 40.000 13.79 0.00 41.30 2.10
539 540 6.374053 AGGGAGTTAAGACTTACTCGTTAGAC 59.626 42.308 13.79 1.89 41.30 2.59
540 541 6.150140 GGGAGTTAAGACTTACTCGTTAGACA 59.850 42.308 13.79 0.00 41.30 3.41
541 542 7.308830 GGGAGTTAAGACTTACTCGTTAGACAA 60.309 40.741 13.79 0.00 41.30 3.18
542 543 8.078596 GGAGTTAAGACTTACTCGTTAGACAAA 58.921 37.037 13.79 0.00 41.30 2.83
543 544 9.116054 GAGTTAAGACTTACTCGTTAGACAAAG 57.884 37.037 0.00 0.00 35.88 2.77
544 545 8.628280 AGTTAAGACTTACTCGTTAGACAAAGT 58.372 33.333 0.00 0.00 29.87 2.66
545 546 9.242477 GTTAAGACTTACTCGTTAGACAAAGTT 57.758 33.333 0.00 0.00 29.87 2.66
546 547 7.927305 AAGACTTACTCGTTAGACAAAGTTC 57.073 36.000 0.00 0.00 29.87 3.01
547 548 7.035840 AGACTTACTCGTTAGACAAAGTTCA 57.964 36.000 0.00 0.00 29.87 3.18
548 549 7.140048 AGACTTACTCGTTAGACAAAGTTCAG 58.860 38.462 0.00 0.00 29.87 3.02
549 550 7.013083 AGACTTACTCGTTAGACAAAGTTCAGA 59.987 37.037 0.00 0.00 29.87 3.27
550 551 7.486647 ACTTACTCGTTAGACAAAGTTCAGAA 58.513 34.615 0.00 0.00 0.00 3.02
551 552 7.648510 ACTTACTCGTTAGACAAAGTTCAGAAG 59.351 37.037 0.00 0.00 0.00 2.85
552 553 5.903810 ACTCGTTAGACAAAGTTCAGAAGT 58.096 37.500 0.00 0.00 0.00 3.01
553 554 5.749109 ACTCGTTAGACAAAGTTCAGAAGTG 59.251 40.000 0.00 0.00 0.00 3.16
554 555 5.047847 TCGTTAGACAAAGTTCAGAAGTGG 58.952 41.667 0.00 0.00 0.00 4.00
555 556 5.047847 CGTTAGACAAAGTTCAGAAGTGGA 58.952 41.667 0.00 0.00 0.00 4.02
556 557 5.522460 CGTTAGACAAAGTTCAGAAGTGGAA 59.478 40.000 0.00 0.00 0.00 3.53
557 558 6.292381 CGTTAGACAAAGTTCAGAAGTGGAAG 60.292 42.308 0.00 0.00 0.00 3.46
558 559 5.359194 AGACAAAGTTCAGAAGTGGAAGA 57.641 39.130 0.00 0.00 0.00 2.87
559 560 5.745227 AGACAAAGTTCAGAAGTGGAAGAA 58.255 37.500 0.00 0.00 0.00 2.52
560 561 6.360618 AGACAAAGTTCAGAAGTGGAAGAAT 58.639 36.000 0.00 0.00 0.00 2.40
561 562 6.261826 AGACAAAGTTCAGAAGTGGAAGAATG 59.738 38.462 0.00 0.00 0.00 2.67
562 563 5.888161 ACAAAGTTCAGAAGTGGAAGAATGT 59.112 36.000 0.00 0.00 0.00 2.71
563 564 7.054124 ACAAAGTTCAGAAGTGGAAGAATGTA 58.946 34.615 0.00 0.00 0.00 2.29
564 565 7.721399 ACAAAGTTCAGAAGTGGAAGAATGTAT 59.279 33.333 0.00 0.00 0.00 2.29
565 566 7.678947 AAGTTCAGAAGTGGAAGAATGTATG 57.321 36.000 0.00 0.00 0.00 2.39
566 567 6.773638 AGTTCAGAAGTGGAAGAATGTATGT 58.226 36.000 0.00 0.00 0.00 2.29
567 568 6.652481 AGTTCAGAAGTGGAAGAATGTATGTG 59.348 38.462 0.00 0.00 0.00 3.21
568 569 4.937620 TCAGAAGTGGAAGAATGTATGTGC 59.062 41.667 0.00 0.00 0.00 4.57
569 570 4.095483 CAGAAGTGGAAGAATGTATGTGCC 59.905 45.833 0.00 0.00 0.00 5.01
570 571 2.632377 AGTGGAAGAATGTATGTGCCG 58.368 47.619 0.00 0.00 0.00 5.69
571 572 1.064060 GTGGAAGAATGTATGTGCCGC 59.936 52.381 0.00 0.00 0.00 6.53
572 573 0.663153 GGAAGAATGTATGTGCCGCC 59.337 55.000 0.00 0.00 0.00 6.13
573 574 0.304705 GAAGAATGTATGTGCCGCCG 59.695 55.000 0.00 0.00 0.00 6.46
574 575 0.392461 AAGAATGTATGTGCCGCCGT 60.392 50.000 0.00 0.00 0.00 5.68
575 576 0.392461 AGAATGTATGTGCCGCCGTT 60.392 50.000 0.00 0.00 0.00 4.44
576 577 0.248054 GAATGTATGTGCCGCCGTTG 60.248 55.000 0.00 0.00 0.00 4.10
577 578 2.265073 AATGTATGTGCCGCCGTTGC 62.265 55.000 0.00 0.00 0.00 4.17
578 579 3.427425 GTATGTGCCGCCGTTGCA 61.427 61.111 0.00 0.00 37.32 4.08
579 580 2.669910 TATGTGCCGCCGTTGCAA 60.670 55.556 0.00 0.00 41.06 4.08
580 581 2.972144 TATGTGCCGCCGTTGCAAC 61.972 57.895 19.89 19.89 41.06 4.17
589 590 3.931130 CGTTGCAACGCACGGACA 61.931 61.111 35.89 0.00 46.06 4.02
590 591 2.405594 GTTGCAACGCACGGACAA 59.594 55.556 14.90 0.00 38.71 3.18
591 592 1.008995 GTTGCAACGCACGGACAAT 60.009 52.632 14.90 0.00 38.71 2.71
592 593 0.593773 GTTGCAACGCACGGACAATT 60.594 50.000 14.90 0.00 38.71 2.32
593 594 0.945099 TTGCAACGCACGGACAATTA 59.055 45.000 0.00 0.00 38.71 1.40
594 595 0.945099 TGCAACGCACGGACAATTAA 59.055 45.000 0.00 0.00 31.71 1.40
595 596 1.323791 GCAACGCACGGACAATTAAC 58.676 50.000 0.00 0.00 0.00 2.01
596 597 1.069500 GCAACGCACGGACAATTAACT 60.069 47.619 0.00 0.00 0.00 2.24
597 598 2.158058 GCAACGCACGGACAATTAACTA 59.842 45.455 0.00 0.00 0.00 2.24
598 599 3.723835 GCAACGCACGGACAATTAACTAG 60.724 47.826 0.00 0.00 0.00 2.57
599 600 3.308438 ACGCACGGACAATTAACTAGT 57.692 42.857 0.00 0.00 0.00 2.57
600 601 3.248266 ACGCACGGACAATTAACTAGTC 58.752 45.455 0.00 0.00 0.00 2.59
601 602 3.057033 ACGCACGGACAATTAACTAGTCT 60.057 43.478 0.00 0.00 32.98 3.24
602 603 4.156556 ACGCACGGACAATTAACTAGTCTA 59.843 41.667 0.00 0.00 32.98 2.59
603 604 4.733887 CGCACGGACAATTAACTAGTCTAG 59.266 45.833 5.27 5.27 32.98 2.43
604 605 5.448225 CGCACGGACAATTAACTAGTCTAGA 60.448 44.000 14.02 0.00 32.98 2.43
605 606 6.327934 GCACGGACAATTAACTAGTCTAGAA 58.672 40.000 14.02 0.00 32.98 2.10
606 607 6.253083 GCACGGACAATTAACTAGTCTAGAAC 59.747 42.308 14.02 0.00 32.98 3.01
607 608 7.310664 CACGGACAATTAACTAGTCTAGAACA 58.689 38.462 14.02 0.00 32.98 3.18
608 609 7.974501 CACGGACAATTAACTAGTCTAGAACAT 59.025 37.037 14.02 0.00 32.98 2.71
609 610 9.182214 ACGGACAATTAACTAGTCTAGAACATA 57.818 33.333 14.02 0.00 32.98 2.29
678 679 2.579410 TTTTGAGTAGAACCCCTGCC 57.421 50.000 0.00 0.00 0.00 4.85
679 680 1.742308 TTTGAGTAGAACCCCTGCCT 58.258 50.000 0.00 0.00 0.00 4.75
680 681 0.984230 TTGAGTAGAACCCCTGCCTG 59.016 55.000 0.00 0.00 0.00 4.85
681 682 1.222113 GAGTAGAACCCCTGCCTGC 59.778 63.158 0.00 0.00 0.00 4.85
682 683 2.258748 GAGTAGAACCCCTGCCTGCC 62.259 65.000 0.00 0.00 0.00 4.85
683 684 2.124996 TAGAACCCCTGCCTGCCT 59.875 61.111 0.00 0.00 0.00 4.75
684 685 1.995626 TAGAACCCCTGCCTGCCTC 60.996 63.158 0.00 0.00 0.00 4.70
685 686 2.477190 TAGAACCCCTGCCTGCCTCT 62.477 60.000 0.00 0.00 0.00 3.69
686 687 2.860971 AACCCCTGCCTGCCTCTT 60.861 61.111 0.00 0.00 0.00 2.85
687 688 3.215587 AACCCCTGCCTGCCTCTTG 62.216 63.158 0.00 0.00 0.00 3.02
688 689 3.655211 CCCCTGCCTGCCTCTTGT 61.655 66.667 0.00 0.00 0.00 3.16
689 690 2.437897 CCCTGCCTGCCTCTTGTT 59.562 61.111 0.00 0.00 0.00 2.83
690 691 1.228675 CCCTGCCTGCCTCTTGTTT 60.229 57.895 0.00 0.00 0.00 2.83
691 692 0.829182 CCCTGCCTGCCTCTTGTTTT 60.829 55.000 0.00 0.00 0.00 2.43
692 693 1.547675 CCCTGCCTGCCTCTTGTTTTA 60.548 52.381 0.00 0.00 0.00 1.52
693 694 2.238521 CCTGCCTGCCTCTTGTTTTAA 58.761 47.619 0.00 0.00 0.00 1.52
694 695 2.029918 CCTGCCTGCCTCTTGTTTTAAC 60.030 50.000 0.00 0.00 0.00 2.01
695 696 1.960689 TGCCTGCCTCTTGTTTTAACC 59.039 47.619 0.00 0.00 0.00 2.85
696 697 2.239400 GCCTGCCTCTTGTTTTAACCT 58.761 47.619 0.00 0.00 0.00 3.50
697 698 2.029918 GCCTGCCTCTTGTTTTAACCTG 60.030 50.000 0.00 0.00 0.00 4.00
698 699 3.222603 CCTGCCTCTTGTTTTAACCTGT 58.777 45.455 0.00 0.00 0.00 4.00
699 700 3.004734 CCTGCCTCTTGTTTTAACCTGTG 59.995 47.826 0.00 0.00 0.00 3.66
700 701 2.955660 TGCCTCTTGTTTTAACCTGTGG 59.044 45.455 0.00 0.00 0.00 4.17
701 702 2.288213 GCCTCTTGTTTTAACCTGTGGC 60.288 50.000 10.14 10.14 34.90 5.01
702 703 2.296190 CCTCTTGTTTTAACCTGTGGCC 59.704 50.000 0.00 0.00 0.00 5.36
703 704 3.222603 CTCTTGTTTTAACCTGTGGCCT 58.777 45.455 3.32 0.00 0.00 5.19
704 705 2.955660 TCTTGTTTTAACCTGTGGCCTG 59.044 45.455 3.32 0.00 0.00 4.85
705 706 2.445682 TGTTTTAACCTGTGGCCTGT 57.554 45.000 3.32 0.00 0.00 4.00
706 707 2.028130 TGTTTTAACCTGTGGCCTGTG 58.972 47.619 3.32 0.00 0.00 3.66
707 708 1.339929 GTTTTAACCTGTGGCCTGTGG 59.660 52.381 3.32 5.56 0.00 4.17
708 709 0.178975 TTTAACCTGTGGCCTGTGGG 60.179 55.000 3.32 3.56 0.00 4.61
709 710 1.063070 TTAACCTGTGGCCTGTGGGA 61.063 55.000 3.32 0.00 33.58 4.37
710 711 1.774894 TAACCTGTGGCCTGTGGGAC 61.775 60.000 3.32 0.00 42.24 4.46
711 712 4.704833 CCTGTGGCCTGTGGGACG 62.705 72.222 3.32 0.00 45.75 4.79
712 713 3.941188 CTGTGGCCTGTGGGACGT 61.941 66.667 3.32 0.00 45.75 4.34
713 714 2.524640 TGTGGCCTGTGGGACGTA 60.525 61.111 3.32 0.00 45.75 3.57
714 715 2.047560 GTGGCCTGTGGGACGTAC 60.048 66.667 3.32 0.00 45.75 3.67
715 716 3.315949 TGGCCTGTGGGACGTACC 61.316 66.667 10.93 10.93 45.75 3.34
716 717 3.315949 GGCCTGTGGGACGTACCA 61.316 66.667 17.93 17.93 41.20 3.25
717 718 2.264794 GCCTGTGGGACGTACCAG 59.735 66.667 23.14 10.38 42.20 4.00
718 719 2.580601 GCCTGTGGGACGTACCAGT 61.581 63.158 23.14 0.00 42.20 4.00
719 720 1.590147 CCTGTGGGACGTACCAGTC 59.410 63.158 23.14 10.56 42.20 3.51
727 728 2.935481 GACGTACCAGTCCAAGTAGG 57.065 55.000 0.00 0.00 35.22 3.18
728 729 0.893447 ACGTACCAGTCCAAGTAGGC 59.107 55.000 0.00 0.00 37.29 3.93
729 730 0.179145 CGTACCAGTCCAAGTAGGCG 60.179 60.000 0.00 0.00 37.29 5.52
730 731 1.180029 GTACCAGTCCAAGTAGGCGA 58.820 55.000 0.00 0.00 37.29 5.54
731 732 1.755380 GTACCAGTCCAAGTAGGCGAT 59.245 52.381 0.00 0.00 37.29 4.58
732 733 1.276622 ACCAGTCCAAGTAGGCGATT 58.723 50.000 0.00 0.00 37.29 3.34
733 734 2.463752 ACCAGTCCAAGTAGGCGATTA 58.536 47.619 0.00 0.00 37.29 1.75
734 735 2.835764 ACCAGTCCAAGTAGGCGATTAA 59.164 45.455 0.00 0.00 37.29 1.40
735 736 3.454812 ACCAGTCCAAGTAGGCGATTAAT 59.545 43.478 0.00 0.00 37.29 1.40
736 737 4.058817 CCAGTCCAAGTAGGCGATTAATC 58.941 47.826 5.30 5.30 37.29 1.75
737 738 4.058817 CAGTCCAAGTAGGCGATTAATCC 58.941 47.826 9.87 3.01 37.29 3.01
738 739 3.709653 AGTCCAAGTAGGCGATTAATCCA 59.290 43.478 9.87 0.00 37.29 3.41
739 740 4.058817 GTCCAAGTAGGCGATTAATCCAG 58.941 47.826 9.87 0.00 37.29 3.86
740 741 2.808543 CCAAGTAGGCGATTAATCCAGC 59.191 50.000 9.87 8.16 0.00 4.85
743 744 2.946762 GGCGATTAATCCAGCCGC 59.053 61.111 15.79 12.67 44.45 6.53
744 745 2.551270 GCGATTAATCCAGCCGCG 59.449 61.111 9.87 0.00 36.53 6.46
745 746 2.244651 GCGATTAATCCAGCCGCGT 61.245 57.895 9.87 0.00 36.53 6.01
746 747 1.564622 CGATTAATCCAGCCGCGTG 59.435 57.895 9.87 0.00 0.00 5.34
747 748 1.279840 GATTAATCCAGCCGCGTGC 59.720 57.895 4.92 8.57 41.71 5.34
786 788 2.185350 CTCAGGGCCGTGCTACTG 59.815 66.667 20.76 9.31 35.86 2.74
1009 1381 2.961768 CCGCAAAAATGGCCTCGT 59.038 55.556 3.32 0.00 0.00 4.18
1080 1458 3.003763 GGCGTTGGGAGAGGGAGT 61.004 66.667 0.00 0.00 0.00 3.85
1202 1580 2.105649 TCAAGGTCAACATGCAGGTACA 59.894 45.455 3.57 0.00 0.00 2.90
1226 1605 1.809619 GCTCGCCGCTGTATGTTGA 60.810 57.895 0.00 0.00 35.14 3.18
1227 1606 1.358725 GCTCGCCGCTGTATGTTGAA 61.359 55.000 0.00 0.00 35.14 2.69
1229 1608 1.017177 TCGCCGCTGTATGTTGAACC 61.017 55.000 0.00 0.00 0.00 3.62
1230 1609 1.800681 GCCGCTGTATGTTGAACCC 59.199 57.895 0.00 0.00 0.00 4.11
1258 1648 3.810896 GAATGCCGGTGGGTTCGC 61.811 66.667 1.90 0.00 34.97 4.70
1351 1741 2.517166 GCCCGGGATTCTTCCTGC 60.517 66.667 29.31 0.00 45.80 4.85
1387 1777 3.181486 TGCGAGCTCTGACCTAGTATTTG 60.181 47.826 12.85 0.00 0.00 2.32
1488 1887 1.075374 AGCCATGACCAAGTTTGCCTA 59.925 47.619 0.00 0.00 0.00 3.93
1556 1966 2.799176 GGGGGTCATGTCAGATTGC 58.201 57.895 0.00 0.00 0.00 3.56
1561 1971 2.153645 GGTCATGTCAGATTGCACACA 58.846 47.619 0.00 0.00 0.00 3.72
1615 2025 7.661040 ACATGTCCCTTTGTTGATCTTAAAAG 58.339 34.615 0.00 1.36 0.00 2.27
1663 2073 5.546621 TGGAGACCTGTAATAATACTGCC 57.453 43.478 0.00 0.00 32.98 4.85
1727 2137 7.120873 CCTCAGAAATTATCCTATGAATGCCTG 59.879 40.741 0.00 0.00 0.00 4.85
1748 2158 3.181505 TGCGGCTGTATAATTTTGTTCCG 60.182 43.478 0.00 0.00 37.60 4.30
1781 2192 7.899648 TTTTTGGTAGGTGAATCCAGTTAAA 57.100 32.000 0.00 0.00 39.02 1.52
1809 2220 2.887783 ACTATATGCTCGGGACTGAGTG 59.112 50.000 9.69 0.00 38.28 3.51
1818 2229 1.402984 CGGGACTGAGTGCTCTTGTAC 60.403 57.143 3.64 1.20 0.00 2.90
2021 2432 2.361737 GTTGCCCTCTGCCCCTTC 60.362 66.667 0.00 0.00 40.16 3.46
2105 2516 1.091771 CAAGGGTGTATGCCGCTGAG 61.092 60.000 0.00 0.00 0.00 3.35
2187 2598 4.746535 TGCCTGGACATACGATCTTTAA 57.253 40.909 0.00 0.00 0.00 1.52
2202 2613 8.294954 ACGATCTTTAATCTTCCTGAGTTCTA 57.705 34.615 0.00 0.00 0.00 2.10
2229 2640 7.945033 TTTATGGAAAGTGCATTTCTTGTTC 57.055 32.000 16.14 2.88 45.62 3.18
2258 2669 3.614568 TTTTACAGGGGGCTTTTACCA 57.385 42.857 0.00 0.00 0.00 3.25
2346 2757 7.079182 TCCTATTGTGCCAATTAAAGTAACG 57.921 36.000 5.85 0.00 0.00 3.18
2367 2778 7.400599 AACGTATCAGGAAGTTATGAGTGTA 57.599 36.000 0.00 0.00 0.00 2.90
2483 2895 1.256812 AAATCTTGCTTGGTTCCCGG 58.743 50.000 0.00 0.00 0.00 5.73
2504 2916 7.335924 TCCCGGTTTTATCAGAGTGAATTAAAG 59.664 37.037 0.00 0.00 0.00 1.85
2506 2918 7.120726 CCGGTTTTATCAGAGTGAATTAAAGGT 59.879 37.037 0.00 0.00 0.00 3.50
2507 2919 9.158233 CGGTTTTATCAGAGTGAATTAAAGGTA 57.842 33.333 0.00 0.00 0.00 3.08
2523 2937 5.917545 AAAGGTACCCCTCTGTAAAGAAA 57.082 39.130 8.74 0.00 41.56 2.52
2532 2946 6.272558 ACCCCTCTGTAAAGAAATGTAAGACT 59.727 38.462 0.00 0.00 0.00 3.24
2671 3087 6.832520 AACACAGGTTGCATTTATATCACA 57.167 33.333 0.00 0.00 35.46 3.58
2672 3088 6.832520 ACACAGGTTGCATTTATATCACAA 57.167 33.333 0.00 0.00 0.00 3.33
2673 3089 7.408756 ACACAGGTTGCATTTATATCACAAT 57.591 32.000 0.00 0.00 0.00 2.71
2674 3090 8.518430 ACACAGGTTGCATTTATATCACAATA 57.482 30.769 0.00 0.00 0.00 1.90
2675 3091 8.623903 ACACAGGTTGCATTTATATCACAATAG 58.376 33.333 0.00 0.00 0.00 1.73
2676 3092 8.623903 CACAGGTTGCATTTATATCACAATAGT 58.376 33.333 0.00 0.00 0.00 2.12
2677 3093 8.840321 ACAGGTTGCATTTATATCACAATAGTC 58.160 33.333 0.00 0.00 0.00 2.59
2703 3119 3.013921 GTGTCCACCTTTTGTCTTGTGA 58.986 45.455 0.00 0.00 0.00 3.58
2817 3233 6.096846 CCTTTCCCCAAGTTAATTAGTCCATG 59.903 42.308 0.00 0.00 0.00 3.66
2818 3234 5.789574 TCCCCAAGTTAATTAGTCCATGT 57.210 39.130 0.00 0.00 0.00 3.21
2819 3235 6.894735 TCCCCAAGTTAATTAGTCCATGTA 57.105 37.500 0.00 0.00 0.00 2.29
2820 3236 6.655930 TCCCCAAGTTAATTAGTCCATGTAC 58.344 40.000 0.00 0.00 0.00 2.90
2821 3237 6.215841 TCCCCAAGTTAATTAGTCCATGTACA 59.784 38.462 0.00 0.00 0.00 2.90
2822 3238 6.542370 CCCCAAGTTAATTAGTCCATGTACAG 59.458 42.308 0.33 0.00 0.00 2.74
2823 3239 6.542370 CCCAAGTTAATTAGTCCATGTACAGG 59.458 42.308 0.33 0.00 0.00 4.00
2824 3240 7.110155 CCAAGTTAATTAGTCCATGTACAGGT 58.890 38.462 6.79 0.00 0.00 4.00
2825 3241 7.610305 CCAAGTTAATTAGTCCATGTACAGGTT 59.390 37.037 6.79 0.00 0.00 3.50
2826 3242 9.010029 CAAGTTAATTAGTCCATGTACAGGTTT 57.990 33.333 6.79 2.31 0.00 3.27
2828 3244 9.886132 AGTTAATTAGTCCATGTACAGGTTTAG 57.114 33.333 6.79 0.00 0.00 1.85
2921 3340 2.536365 TCGTCATTTGAGCATACCGTC 58.464 47.619 0.00 0.00 0.00 4.79
2975 3394 3.003689 AGAAACAGGATTGTTCAACAGCG 59.996 43.478 0.00 0.00 46.54 5.18
3059 3478 4.811024 TCAAATCCTGCAGATAACATCGTC 59.189 41.667 17.39 0.00 33.66 4.20
3093 3512 6.397831 ACAACAAAAAGGCTAAAAACGTTC 57.602 33.333 0.00 0.00 0.00 3.95
3131 3550 0.396435 TGTACCTGTCCAGCCAACAG 59.604 55.000 4.23 4.23 43.04 3.16
3166 3585 4.893524 TCAAGTCTTGACACTCTGTTCCTA 59.106 41.667 11.36 0.00 34.08 2.94
3408 3830 5.360144 TGTTGGTAGCTCTTATCTACAGACC 59.640 44.000 0.00 0.00 38.45 3.85
3622 4047 4.514441 CACAGTTCTGAGTTCTTGCTGATT 59.486 41.667 6.83 0.00 0.00 2.57
3630 4055 5.478407 TGAGTTCTTGCTGATTATGACGAA 58.522 37.500 0.00 0.00 0.00 3.85
3739 4164 0.321564 TCCATGAACTTCAGCACCCG 60.322 55.000 0.00 0.00 0.00 5.28
3750 4175 3.223589 GCACCCGTTTGGCACCTT 61.224 61.111 0.00 0.00 37.83 3.50
3751 4176 2.727544 CACCCGTTTGGCACCTTG 59.272 61.111 0.00 0.00 37.83 3.61
3753 4178 2.520741 CCCGTTTGGCACCTTGGT 60.521 61.111 0.00 0.00 0.00 3.67
3754 4179 2.131067 CCCGTTTGGCACCTTGGTT 61.131 57.895 0.00 0.00 0.00 3.67
3755 4180 0.824182 CCCGTTTGGCACCTTGGTTA 60.824 55.000 0.00 0.00 0.00 2.85
3756 4181 0.312729 CCGTTTGGCACCTTGGTTAC 59.687 55.000 0.00 0.00 0.00 2.50
3757 4182 1.025812 CGTTTGGCACCTTGGTTACA 58.974 50.000 0.00 0.00 0.00 2.41
3758 4183 1.001815 CGTTTGGCACCTTGGTTACAG 60.002 52.381 0.00 0.00 0.00 2.74
3759 4184 2.303175 GTTTGGCACCTTGGTTACAGA 58.697 47.619 0.00 0.00 0.00 3.41
3760 4185 1.975660 TTGGCACCTTGGTTACAGAC 58.024 50.000 0.00 0.00 0.00 3.51
3813 4238 9.582431 CTTTGTAGTATCTCCATTTCGAAGTTA 57.418 33.333 0.00 0.00 0.00 2.24
3852 4277 2.284263 TTTTGTCGTGCATGCAAACA 57.716 40.000 24.58 25.09 32.68 2.83
3881 4306 8.338259 CGGCTATAGATCCATTGTAAATAATGC 58.662 37.037 3.21 0.00 36.86 3.56
3882 4307 8.624776 GGCTATAGATCCATTGTAAATAATGCC 58.375 37.037 3.21 0.00 36.86 4.40
3995 4422 8.552034 GTTGTCATTTACACTATATTCAGGAGC 58.448 37.037 0.00 0.00 38.00 4.70
3999 4426 7.442364 TCATTTACACTATATTCAGGAGCAAGC 59.558 37.037 0.00 0.00 0.00 4.01
4025 4452 9.219603 CAACACTTTGGATACTCTCATTTCTTA 57.780 33.333 0.00 0.00 37.61 2.10
4105 4532 5.954296 ATTCTCATCAACACAGGAACAAG 57.046 39.130 0.00 0.00 0.00 3.16
4167 4680 7.041098 ACAAGTTAAGTGCAGGAATTCAGTAAG 60.041 37.037 7.93 0.00 0.00 2.34
4170 4683 7.819900 AGTTAAGTGCAGGAATTCAGTAAGTAG 59.180 37.037 7.93 0.00 0.00 2.57
4186 4699 4.608948 AAGTAGTTCTGAGGTGTGGAAG 57.391 45.455 0.00 0.00 0.00 3.46
4238 4752 2.681778 AGCTCACCGGCAGCTAGT 60.682 61.111 23.80 3.82 45.76 2.57
4239 4753 2.266055 GCTCACCGGCAGCTAGTT 59.734 61.111 17.02 0.00 33.75 2.24
4240 4754 1.376037 GCTCACCGGCAGCTAGTTT 60.376 57.895 17.02 0.00 33.75 2.66
4241 4755 0.955919 GCTCACCGGCAGCTAGTTTT 60.956 55.000 17.02 0.00 33.75 2.43
4242 4756 1.674817 GCTCACCGGCAGCTAGTTTTA 60.675 52.381 17.02 0.00 33.75 1.52
4243 4757 2.271800 CTCACCGGCAGCTAGTTTTAG 58.728 52.381 0.00 0.00 0.00 1.85
4321 4835 1.517257 CCTCGACGACATGCTCCAC 60.517 63.158 0.00 0.00 0.00 4.02
4338 4852 2.276116 ACAGCACGTCAGTCCCGAT 61.276 57.895 0.00 0.00 0.00 4.18
4492 5006 4.522689 ATGCCGCCGACGTGCATA 62.523 61.111 15.81 0.00 46.91 3.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.979578 AATCATGTATTACAAAGCTTTGACAAA 57.020 25.926 38.78 28.32 40.55 2.83
15 16 9.991388 TTAAACTTTGCGGTAATCATGTATTAC 57.009 29.630 14.59 14.59 46.30 1.89
17 18 9.349145 GTTTAAACTTTGCGGTAATCATGTATT 57.651 29.630 11.18 0.00 0.00 1.89
18 19 7.971722 GGTTTAAACTTTGCGGTAATCATGTAT 59.028 33.333 17.50 0.00 0.00 2.29
19 20 7.175293 AGGTTTAAACTTTGCGGTAATCATGTA 59.825 33.333 17.50 0.00 0.00 2.29
20 21 6.015772 AGGTTTAAACTTTGCGGTAATCATGT 60.016 34.615 17.50 0.00 0.00 3.21
21 22 6.386654 AGGTTTAAACTTTGCGGTAATCATG 58.613 36.000 17.50 0.00 0.00 3.07
22 23 6.584185 AGGTTTAAACTTTGCGGTAATCAT 57.416 33.333 17.50 0.00 0.00 2.45
23 24 5.334260 CGAGGTTTAAACTTTGCGGTAATCA 60.334 40.000 17.50 0.00 0.00 2.57
24 25 5.084055 CGAGGTTTAAACTTTGCGGTAATC 58.916 41.667 17.50 0.00 0.00 1.75
25 26 4.083164 CCGAGGTTTAAACTTTGCGGTAAT 60.083 41.667 17.50 0.00 33.35 1.89
26 27 3.250521 CCGAGGTTTAAACTTTGCGGTAA 59.749 43.478 17.50 0.00 33.35 2.85
27 28 2.807392 CCGAGGTTTAAACTTTGCGGTA 59.193 45.455 17.50 0.00 33.35 4.02
28 29 1.605232 CCGAGGTTTAAACTTTGCGGT 59.395 47.619 17.50 0.00 33.35 5.68
29 30 1.068816 CCCGAGGTTTAAACTTTGCGG 60.069 52.381 22.55 22.55 37.41 5.69
30 31 1.068816 CCCCGAGGTTTAAACTTTGCG 60.069 52.381 17.50 14.41 0.00 4.85
31 32 2.717580 CCCCGAGGTTTAAACTTTGC 57.282 50.000 17.50 1.52 0.00 3.68
43 44 1.228429 TGCCTTTGAAACCCCGAGG 60.228 57.895 0.00 0.00 40.04 4.63
44 45 1.524008 GGTGCCTTTGAAACCCCGAG 61.524 60.000 0.00 0.00 0.00 4.63
45 46 1.529713 GGTGCCTTTGAAACCCCGA 60.530 57.895 0.00 0.00 0.00 5.14
46 47 1.524008 GAGGTGCCTTTGAAACCCCG 61.524 60.000 0.00 0.00 34.29 5.73
47 48 1.524008 CGAGGTGCCTTTGAAACCCC 61.524 60.000 0.00 0.00 34.29 4.95
48 49 0.536460 TCGAGGTGCCTTTGAAACCC 60.536 55.000 0.00 0.00 34.29 4.11
49 50 1.266989 CTTCGAGGTGCCTTTGAAACC 59.733 52.381 7.80 0.00 0.00 3.27
50 51 1.335051 GCTTCGAGGTGCCTTTGAAAC 60.335 52.381 0.00 1.94 0.00 2.78
51 52 0.951558 GCTTCGAGGTGCCTTTGAAA 59.048 50.000 0.00 0.00 0.00 2.69
52 53 0.179032 TGCTTCGAGGTGCCTTTGAA 60.179 50.000 0.00 0.01 0.00 2.69
53 54 0.036732 ATGCTTCGAGGTGCCTTTGA 59.963 50.000 0.00 0.00 0.00 2.69
54 55 0.449388 GATGCTTCGAGGTGCCTTTG 59.551 55.000 0.00 0.00 0.00 2.77
55 56 0.036732 TGATGCTTCGAGGTGCCTTT 59.963 50.000 0.00 0.00 0.00 3.11
56 57 0.036732 TTGATGCTTCGAGGTGCCTT 59.963 50.000 0.00 0.00 0.00 4.35
57 58 0.674895 GTTGATGCTTCGAGGTGCCT 60.675 55.000 0.00 0.00 0.00 4.75
58 59 0.955428 TGTTGATGCTTCGAGGTGCC 60.955 55.000 0.00 0.00 0.00 5.01
59 60 0.874390 TTGTTGATGCTTCGAGGTGC 59.126 50.000 0.00 0.00 0.00 5.01
60 61 3.624326 TTTTGTTGATGCTTCGAGGTG 57.376 42.857 0.00 0.00 0.00 4.00
61 62 3.057315 CCATTTTGTTGATGCTTCGAGGT 60.057 43.478 0.00 0.00 0.00 3.85
62 63 3.057315 ACCATTTTGTTGATGCTTCGAGG 60.057 43.478 0.00 0.00 0.00 4.63
63 64 4.164822 ACCATTTTGTTGATGCTTCGAG 57.835 40.909 0.00 0.00 0.00 4.04
64 65 5.000591 TCTACCATTTTGTTGATGCTTCGA 58.999 37.500 0.00 0.00 0.00 3.71
65 66 5.106555 ACTCTACCATTTTGTTGATGCTTCG 60.107 40.000 0.00 0.00 0.00 3.79
66 67 6.259550 ACTCTACCATTTTGTTGATGCTTC 57.740 37.500 0.00 0.00 0.00 3.86
67 68 6.375455 CCTACTCTACCATTTTGTTGATGCTT 59.625 38.462 0.00 0.00 0.00 3.91
68 69 5.882557 CCTACTCTACCATTTTGTTGATGCT 59.117 40.000 0.00 0.00 0.00 3.79
69 70 5.648092 ACCTACTCTACCATTTTGTTGATGC 59.352 40.000 0.00 0.00 0.00 3.91
70 71 7.390440 TCAACCTACTCTACCATTTTGTTGATG 59.610 37.037 0.00 0.00 35.85 3.07
71 72 7.458397 TCAACCTACTCTACCATTTTGTTGAT 58.542 34.615 0.00 0.00 35.85 2.57
72 73 6.833041 TCAACCTACTCTACCATTTTGTTGA 58.167 36.000 0.00 0.00 37.73 3.18
73 74 7.504924 TTCAACCTACTCTACCATTTTGTTG 57.495 36.000 0.00 0.00 33.65 3.33
74 75 8.576442 CAATTCAACCTACTCTACCATTTTGTT 58.424 33.333 0.00 0.00 0.00 2.83
75 76 7.942341 TCAATTCAACCTACTCTACCATTTTGT 59.058 33.333 0.00 0.00 0.00 2.83
76 77 8.335532 TCAATTCAACCTACTCTACCATTTTG 57.664 34.615 0.00 0.00 0.00 2.44
77 78 8.934023 TTCAATTCAACCTACTCTACCATTTT 57.066 30.769 0.00 0.00 0.00 1.82
78 79 8.934023 TTTCAATTCAACCTACTCTACCATTT 57.066 30.769 0.00 0.00 0.00 2.32
79 80 8.383175 TCTTTCAATTCAACCTACTCTACCATT 58.617 33.333 0.00 0.00 0.00 3.16
80 81 7.918076 TCTTTCAATTCAACCTACTCTACCAT 58.082 34.615 0.00 0.00 0.00 3.55
81 82 7.311092 TCTTTCAATTCAACCTACTCTACCA 57.689 36.000 0.00 0.00 0.00 3.25
82 83 7.119407 GGTTCTTTCAATTCAACCTACTCTACC 59.881 40.741 0.00 0.00 36.19 3.18
83 84 7.148623 CGGTTCTTTCAATTCAACCTACTCTAC 60.149 40.741 0.00 0.00 36.85 2.59
84 85 6.872020 CGGTTCTTTCAATTCAACCTACTCTA 59.128 38.462 0.00 0.00 36.85 2.43
85 86 5.701290 CGGTTCTTTCAATTCAACCTACTCT 59.299 40.000 0.00 0.00 36.85 3.24
86 87 5.106673 CCGGTTCTTTCAATTCAACCTACTC 60.107 44.000 0.00 0.00 36.85 2.59
87 88 4.760204 CCGGTTCTTTCAATTCAACCTACT 59.240 41.667 0.00 0.00 36.85 2.57
88 89 4.082949 CCCGGTTCTTTCAATTCAACCTAC 60.083 45.833 0.00 0.00 36.85 3.18
89 90 4.076394 CCCGGTTCTTTCAATTCAACCTA 58.924 43.478 0.00 0.00 36.85 3.08
90 91 2.890945 CCCGGTTCTTTCAATTCAACCT 59.109 45.455 0.00 0.00 36.85 3.50
91 92 2.888414 TCCCGGTTCTTTCAATTCAACC 59.112 45.455 0.00 0.00 35.82 3.77
92 93 3.611766 GCTCCCGGTTCTTTCAATTCAAC 60.612 47.826 0.00 0.00 0.00 3.18
93 94 2.556622 GCTCCCGGTTCTTTCAATTCAA 59.443 45.455 0.00 0.00 0.00 2.69
94 95 2.159382 GCTCCCGGTTCTTTCAATTCA 58.841 47.619 0.00 0.00 0.00 2.57
95 96 2.159382 TGCTCCCGGTTCTTTCAATTC 58.841 47.619 0.00 0.00 0.00 2.17
96 97 2.286365 TGCTCCCGGTTCTTTCAATT 57.714 45.000 0.00 0.00 0.00 2.32
97 98 2.162681 CTTGCTCCCGGTTCTTTCAAT 58.837 47.619 0.00 0.00 0.00 2.57
98 99 1.142060 TCTTGCTCCCGGTTCTTTCAA 59.858 47.619 0.00 0.00 0.00 2.69
99 100 0.762418 TCTTGCTCCCGGTTCTTTCA 59.238 50.000 0.00 0.00 0.00 2.69
100 101 1.892209 TTCTTGCTCCCGGTTCTTTC 58.108 50.000 0.00 0.00 0.00 2.62
101 102 2.230660 CTTTCTTGCTCCCGGTTCTTT 58.769 47.619 0.00 0.00 0.00 2.52
102 103 1.545651 CCTTTCTTGCTCCCGGTTCTT 60.546 52.381 0.00 0.00 0.00 2.52
103 104 0.036875 CCTTTCTTGCTCCCGGTTCT 59.963 55.000 0.00 0.00 0.00 3.01
104 105 1.587043 GCCTTTCTTGCTCCCGGTTC 61.587 60.000 0.00 0.00 0.00 3.62
105 106 1.603739 GCCTTTCTTGCTCCCGGTT 60.604 57.895 0.00 0.00 0.00 4.44
106 107 2.034221 GCCTTTCTTGCTCCCGGT 59.966 61.111 0.00 0.00 0.00 5.28
107 108 2.352805 AGCCTTTCTTGCTCCCGG 59.647 61.111 0.00 0.00 32.41 5.73
112 113 1.517242 CTCAACGAGCCTTTCTTGCT 58.483 50.000 0.00 0.00 43.03 3.91
113 114 0.519077 CCTCAACGAGCCTTTCTTGC 59.481 55.000 0.00 0.00 0.00 4.01
114 115 2.169832 TCCTCAACGAGCCTTTCTTG 57.830 50.000 0.00 0.00 0.00 3.02
115 116 3.515901 AGTATCCTCAACGAGCCTTTCTT 59.484 43.478 0.00 0.00 0.00 2.52
116 117 3.100671 AGTATCCTCAACGAGCCTTTCT 58.899 45.455 0.00 0.00 0.00 2.52
117 118 3.528597 AGTATCCTCAACGAGCCTTTC 57.471 47.619 0.00 0.00 0.00 2.62
118 119 4.279145 TCTAGTATCCTCAACGAGCCTTT 58.721 43.478 0.00 0.00 0.00 3.11
119 120 3.899726 TCTAGTATCCTCAACGAGCCTT 58.100 45.455 0.00 0.00 0.00 4.35
120 121 3.579534 TCTAGTATCCTCAACGAGCCT 57.420 47.619 0.00 0.00 0.00 4.58
121 122 5.961396 TTATCTAGTATCCTCAACGAGCC 57.039 43.478 0.00 0.00 0.00 4.70
122 123 7.415429 GGGTATTATCTAGTATCCTCAACGAGC 60.415 44.444 0.00 0.00 0.00 5.03
123 124 7.201626 CGGGTATTATCTAGTATCCTCAACGAG 60.202 44.444 0.00 0.00 0.00 4.18
124 125 6.596888 CGGGTATTATCTAGTATCCTCAACGA 59.403 42.308 0.00 0.00 0.00 3.85
125 126 6.183360 CCGGGTATTATCTAGTATCCTCAACG 60.183 46.154 0.00 0.00 0.00 4.10
126 127 6.405619 GCCGGGTATTATCTAGTATCCTCAAC 60.406 46.154 2.18 0.00 0.00 3.18
127 128 5.655532 GCCGGGTATTATCTAGTATCCTCAA 59.344 44.000 2.18 0.00 0.00 3.02
128 129 5.198965 GCCGGGTATTATCTAGTATCCTCA 58.801 45.833 2.18 0.00 0.00 3.86
129 130 4.275443 CGCCGGGTATTATCTAGTATCCTC 59.725 50.000 2.18 0.00 0.00 3.71
130 131 4.080129 TCGCCGGGTATTATCTAGTATCCT 60.080 45.833 2.18 0.00 0.00 3.24
131 132 4.202441 TCGCCGGGTATTATCTAGTATCC 58.798 47.826 2.18 0.00 0.00 2.59
132 133 4.880696 ACTCGCCGGGTATTATCTAGTATC 59.119 45.833 2.18 0.00 0.00 2.24
133 134 4.853007 ACTCGCCGGGTATTATCTAGTAT 58.147 43.478 2.18 0.00 0.00 2.12
134 135 4.292186 ACTCGCCGGGTATTATCTAGTA 57.708 45.455 2.18 0.00 0.00 1.82
135 136 3.151912 ACTCGCCGGGTATTATCTAGT 57.848 47.619 2.18 0.00 0.00 2.57
136 137 3.834610 CAACTCGCCGGGTATTATCTAG 58.165 50.000 2.18 0.00 0.00 2.43
137 138 2.029649 GCAACTCGCCGGGTATTATCTA 60.030 50.000 2.18 0.00 32.94 1.98
138 139 1.270147 GCAACTCGCCGGGTATTATCT 60.270 52.381 2.18 0.00 32.94 1.98
139 140 1.145803 GCAACTCGCCGGGTATTATC 58.854 55.000 2.18 0.00 32.94 1.75
140 141 3.300711 GCAACTCGCCGGGTATTAT 57.699 52.632 2.18 0.00 32.94 1.28
141 142 4.840168 GCAACTCGCCGGGTATTA 57.160 55.556 2.18 0.00 32.94 0.98
150 151 3.843240 CTTCTCGCGGCAACTCGC 61.843 66.667 6.13 0.00 46.37 5.03
152 153 0.741221 ATTCCTTCTCGCGGCAACTC 60.741 55.000 6.13 0.00 0.00 3.01
153 154 0.321653 AATTCCTTCTCGCGGCAACT 60.322 50.000 6.13 0.00 0.00 3.16
154 155 0.179189 CAATTCCTTCTCGCGGCAAC 60.179 55.000 6.13 0.00 0.00 4.17
155 156 1.922135 GCAATTCCTTCTCGCGGCAA 61.922 55.000 6.13 0.00 0.00 4.52
156 157 2.398554 GCAATTCCTTCTCGCGGCA 61.399 57.895 6.13 0.00 0.00 5.69
157 158 1.922135 TTGCAATTCCTTCTCGCGGC 61.922 55.000 6.13 0.00 0.00 6.53
158 159 0.734889 ATTGCAATTCCTTCTCGCGG 59.265 50.000 5.99 0.00 0.00 6.46
159 160 3.885484 ATATTGCAATTCCTTCTCGCG 57.115 42.857 18.75 0.00 0.00 5.87
160 161 7.362662 TGAAATATATTGCAATTCCTTCTCGC 58.637 34.615 18.75 0.63 0.00 5.03
161 162 8.562892 ACTGAAATATATTGCAATTCCTTCTCG 58.437 33.333 18.75 12.09 0.00 4.04
162 163 9.674824 CACTGAAATATATTGCAATTCCTTCTC 57.325 33.333 18.75 8.43 0.00 2.87
163 164 9.412460 TCACTGAAATATATTGCAATTCCTTCT 57.588 29.630 18.75 0.00 0.00 2.85
171 172 9.667989 CGATCAAATCACTGAAATATATTGCAA 57.332 29.630 7.56 0.00 0.00 4.08
172 173 8.839343 ACGATCAAATCACTGAAATATATTGCA 58.161 29.630 5.98 5.98 0.00 4.08
176 177 9.908152 TCGTACGATCAAATCACTGAAATATAT 57.092 29.630 15.28 0.00 0.00 0.86
177 178 9.738832 TTCGTACGATCAAATCACTGAAATATA 57.261 29.630 20.27 0.00 0.00 0.86
178 179 8.642908 TTCGTACGATCAAATCACTGAAATAT 57.357 30.769 20.27 0.00 0.00 1.28
179 180 7.253983 GCTTCGTACGATCAAATCACTGAAATA 60.254 37.037 20.27 0.00 0.00 1.40
180 181 6.455646 GCTTCGTACGATCAAATCACTGAAAT 60.456 38.462 20.27 0.00 0.00 2.17
181 182 5.163992 GCTTCGTACGATCAAATCACTGAAA 60.164 40.000 20.27 0.00 0.00 2.69
182 183 4.326278 GCTTCGTACGATCAAATCACTGAA 59.674 41.667 20.27 0.00 0.00 3.02
183 184 3.857665 GCTTCGTACGATCAAATCACTGA 59.142 43.478 20.27 0.00 0.00 3.41
184 185 3.859961 AGCTTCGTACGATCAAATCACTG 59.140 43.478 20.27 1.25 0.00 3.66
185 186 4.111375 AGCTTCGTACGATCAAATCACT 57.889 40.909 20.27 5.09 0.00 3.41
186 187 4.563184 AGAAGCTTCGTACGATCAAATCAC 59.437 41.667 20.27 6.45 0.00 3.06
187 188 4.744570 AGAAGCTTCGTACGATCAAATCA 58.255 39.130 20.27 0.58 0.00 2.57
188 189 6.994868 ATAGAAGCTTCGTACGATCAAATC 57.005 37.500 20.27 13.49 0.00 2.17
189 190 6.757010 ACAATAGAAGCTTCGTACGATCAAAT 59.243 34.615 20.27 8.43 0.00 2.32
190 191 6.097356 ACAATAGAAGCTTCGTACGATCAAA 58.903 36.000 20.27 2.63 0.00 2.69
191 192 5.647589 ACAATAGAAGCTTCGTACGATCAA 58.352 37.500 20.27 3.05 0.00 2.57
192 193 5.244785 ACAATAGAAGCTTCGTACGATCA 57.755 39.130 20.27 3.88 0.00 2.92
193 194 5.742453 TCAACAATAGAAGCTTCGTACGATC 59.258 40.000 20.27 13.50 0.00 3.69
194 195 5.647589 TCAACAATAGAAGCTTCGTACGAT 58.352 37.500 20.27 3.34 0.00 3.73
195 196 5.050644 TCAACAATAGAAGCTTCGTACGA 57.949 39.130 20.43 15.28 0.00 3.43
196 197 5.756950 TTCAACAATAGAAGCTTCGTACG 57.243 39.130 20.43 9.53 0.00 3.67
259 260 9.295825 TGTTCTAACTACACAATCAATTCCAAT 57.704 29.630 0.00 0.00 0.00 3.16
260 261 8.684386 TGTTCTAACTACACAATCAATTCCAA 57.316 30.769 0.00 0.00 0.00 3.53
261 262 8.862325 ATGTTCTAACTACACAATCAATTCCA 57.138 30.769 0.00 0.00 0.00 3.53
290 291 8.779303 CCATTACGTTATGCCACTTATATTCAA 58.221 33.333 9.01 0.00 0.00 2.69
291 292 8.151596 TCCATTACGTTATGCCACTTATATTCA 58.848 33.333 9.01 0.00 0.00 2.57
292 293 8.542497 TCCATTACGTTATGCCACTTATATTC 57.458 34.615 9.01 0.00 0.00 1.75
293 294 9.515226 AATCCATTACGTTATGCCACTTATATT 57.485 29.630 9.01 0.00 0.00 1.28
294 295 9.515226 AAATCCATTACGTTATGCCACTTATAT 57.485 29.630 9.01 0.00 0.00 0.86
295 296 8.911918 AAATCCATTACGTTATGCCACTTATA 57.088 30.769 9.01 0.00 0.00 0.98
296 297 7.817418 AAATCCATTACGTTATGCCACTTAT 57.183 32.000 9.01 0.00 0.00 1.73
297 298 7.633193 AAAATCCATTACGTTATGCCACTTA 57.367 32.000 9.01 0.00 0.00 2.24
298 299 6.524101 AAAATCCATTACGTTATGCCACTT 57.476 33.333 9.01 0.00 0.00 3.16
299 300 6.524101 AAAAATCCATTACGTTATGCCACT 57.476 33.333 9.01 0.00 0.00 4.00
320 321 2.295629 TCCGCTCAACATGCATGAAAAA 59.704 40.909 32.75 13.51 0.00 1.94
321 322 1.885233 TCCGCTCAACATGCATGAAAA 59.115 42.857 32.75 15.21 0.00 2.29
322 323 1.199789 GTCCGCTCAACATGCATGAAA 59.800 47.619 32.75 15.55 0.00 2.69
323 324 0.804364 GTCCGCTCAACATGCATGAA 59.196 50.000 32.75 15.89 0.00 2.57
324 325 1.026182 GGTCCGCTCAACATGCATGA 61.026 55.000 32.75 11.15 0.00 3.07
325 326 1.028330 AGGTCCGCTCAACATGCATG 61.028 55.000 25.09 25.09 0.00 4.06
326 327 0.322816 AAGGTCCGCTCAACATGCAT 60.323 50.000 0.00 0.00 0.00 3.96
327 328 0.537143 AAAGGTCCGCTCAACATGCA 60.537 50.000 0.00 0.00 0.00 3.96
328 329 0.109597 CAAAGGTCCGCTCAACATGC 60.110 55.000 0.00 0.00 0.00 4.06
329 330 1.522668 TCAAAGGTCCGCTCAACATG 58.477 50.000 0.00 0.00 0.00 3.21
330 331 2.086869 CATCAAAGGTCCGCTCAACAT 58.913 47.619 0.00 0.00 0.00 2.71
331 332 1.071542 TCATCAAAGGTCCGCTCAACA 59.928 47.619 0.00 0.00 0.00 3.33
332 333 1.734465 CTCATCAAAGGTCCGCTCAAC 59.266 52.381 0.00 0.00 0.00 3.18
333 334 1.339055 CCTCATCAAAGGTCCGCTCAA 60.339 52.381 0.00 0.00 0.00 3.02
334 335 0.250234 CCTCATCAAAGGTCCGCTCA 59.750 55.000 0.00 0.00 0.00 4.26
335 336 3.071580 CCTCATCAAAGGTCCGCTC 57.928 57.895 0.00 0.00 0.00 5.03
342 343 0.606401 ACACGCCACCTCATCAAAGG 60.606 55.000 0.00 0.00 42.55 3.11
343 344 2.093306 TACACGCCACCTCATCAAAG 57.907 50.000 0.00 0.00 0.00 2.77
344 345 2.355197 CATACACGCCACCTCATCAAA 58.645 47.619 0.00 0.00 0.00 2.69
345 346 1.406751 CCATACACGCCACCTCATCAA 60.407 52.381 0.00 0.00 0.00 2.57
346 347 0.177836 CCATACACGCCACCTCATCA 59.822 55.000 0.00 0.00 0.00 3.07
347 348 0.532862 CCCATACACGCCACCTCATC 60.533 60.000 0.00 0.00 0.00 2.92
348 349 0.980754 TCCCATACACGCCACCTCAT 60.981 55.000 0.00 0.00 0.00 2.90
349 350 1.195442 TTCCCATACACGCCACCTCA 61.195 55.000 0.00 0.00 0.00 3.86
350 351 0.743345 GTTCCCATACACGCCACCTC 60.743 60.000 0.00 0.00 0.00 3.85
351 352 1.198759 AGTTCCCATACACGCCACCT 61.199 55.000 0.00 0.00 0.00 4.00
352 353 1.024579 CAGTTCCCATACACGCCACC 61.025 60.000 0.00 0.00 0.00 4.61
353 354 0.036765 TCAGTTCCCATACACGCCAC 60.037 55.000 0.00 0.00 0.00 5.01
354 355 0.687920 TTCAGTTCCCATACACGCCA 59.312 50.000 0.00 0.00 0.00 5.69
355 356 1.816074 TTTCAGTTCCCATACACGCC 58.184 50.000 0.00 0.00 0.00 5.68
356 357 2.161609 CCTTTTCAGTTCCCATACACGC 59.838 50.000 0.00 0.00 0.00 5.34
357 358 2.747446 CCCTTTTCAGTTCCCATACACG 59.253 50.000 0.00 0.00 0.00 4.49
358 359 3.506067 CACCCTTTTCAGTTCCCATACAC 59.494 47.826 0.00 0.00 0.00 2.90
359 360 3.761897 CACCCTTTTCAGTTCCCATACA 58.238 45.455 0.00 0.00 0.00 2.29
360 361 2.492088 GCACCCTTTTCAGTTCCCATAC 59.508 50.000 0.00 0.00 0.00 2.39
361 362 2.109128 TGCACCCTTTTCAGTTCCCATA 59.891 45.455 0.00 0.00 0.00 2.74
362 363 1.133199 TGCACCCTTTTCAGTTCCCAT 60.133 47.619 0.00 0.00 0.00 4.00
363 364 0.260230 TGCACCCTTTTCAGTTCCCA 59.740 50.000 0.00 0.00 0.00 4.37
364 365 1.273327 CATGCACCCTTTTCAGTTCCC 59.727 52.381 0.00 0.00 0.00 3.97
365 366 2.229784 CTCATGCACCCTTTTCAGTTCC 59.770 50.000 0.00 0.00 0.00 3.62
366 367 3.149196 TCTCATGCACCCTTTTCAGTTC 58.851 45.455 0.00 0.00 0.00 3.01
367 368 3.228188 TCTCATGCACCCTTTTCAGTT 57.772 42.857 0.00 0.00 0.00 3.16
368 369 2.957402 TCTCATGCACCCTTTTCAGT 57.043 45.000 0.00 0.00 0.00 3.41
369 370 3.349927 TGATCTCATGCACCCTTTTCAG 58.650 45.455 0.00 0.00 0.00 3.02
370 371 3.438216 TGATCTCATGCACCCTTTTCA 57.562 42.857 0.00 0.00 0.00 2.69
371 372 4.996788 ATTGATCTCATGCACCCTTTTC 57.003 40.909 0.00 0.00 0.00 2.29
372 373 6.855763 TTAATTGATCTCATGCACCCTTTT 57.144 33.333 0.00 0.00 0.00 2.27
373 374 8.537728 TTATTAATTGATCTCATGCACCCTTT 57.462 30.769 0.00 0.00 0.00 3.11
374 375 8.582437 CATTATTAATTGATCTCATGCACCCTT 58.418 33.333 0.00 0.00 0.00 3.95
375 376 7.177921 CCATTATTAATTGATCTCATGCACCCT 59.822 37.037 0.00 0.00 0.00 4.34
376 377 7.177216 TCCATTATTAATTGATCTCATGCACCC 59.823 37.037 0.00 0.00 0.00 4.61
377 378 8.114331 TCCATTATTAATTGATCTCATGCACC 57.886 34.615 0.00 0.00 0.00 5.01
378 379 9.970395 TTTCCATTATTAATTGATCTCATGCAC 57.030 29.630 0.00 0.00 0.00 4.57
388 389 9.651913 GAGGCAAAGTTTTCCATTATTAATTGA 57.348 29.630 7.06 0.00 0.00 2.57
389 390 9.434420 TGAGGCAAAGTTTTCCATTATTAATTG 57.566 29.630 7.06 0.00 0.00 2.32
391 392 9.603921 CATGAGGCAAAGTTTTCCATTATTAAT 57.396 29.630 7.06 0.00 0.00 1.40
392 393 7.548780 GCATGAGGCAAAGTTTTCCATTATTAA 59.451 33.333 7.06 0.00 43.97 1.40
393 394 7.041107 GCATGAGGCAAAGTTTTCCATTATTA 58.959 34.615 7.06 0.00 43.97 0.98
394 395 5.876460 GCATGAGGCAAAGTTTTCCATTATT 59.124 36.000 7.06 0.00 43.97 1.40
395 396 5.422145 GCATGAGGCAAAGTTTTCCATTAT 58.578 37.500 7.06 0.00 43.97 1.28
396 397 4.819769 GCATGAGGCAAAGTTTTCCATTA 58.180 39.130 7.06 0.00 43.97 1.90
397 398 3.667360 GCATGAGGCAAAGTTTTCCATT 58.333 40.909 7.06 0.00 43.97 3.16
398 399 3.323751 GCATGAGGCAAAGTTTTCCAT 57.676 42.857 7.06 0.00 43.97 3.41
399 400 2.818130 GCATGAGGCAAAGTTTTCCA 57.182 45.000 7.06 0.00 43.97 3.53
410 411 1.019673 CACCACTACATGCATGAGGC 58.980 55.000 32.75 0.00 45.13 4.70
411 412 1.671979 CCACCACTACATGCATGAGG 58.328 55.000 32.75 26.03 0.00 3.86
412 413 1.671979 CCCACCACTACATGCATGAG 58.328 55.000 32.75 24.46 0.00 2.90
413 414 0.394216 GCCCACCACTACATGCATGA 60.394 55.000 32.75 15.12 0.00 3.07
414 415 1.386525 GGCCCACCACTACATGCATG 61.387 60.000 25.09 25.09 35.26 4.06
415 416 1.076777 GGCCCACCACTACATGCAT 60.077 57.895 0.00 0.00 35.26 3.96
416 417 1.788518 AAGGCCCACCACTACATGCA 61.789 55.000 0.00 0.00 39.06 3.96
417 418 0.611896 AAAGGCCCACCACTACATGC 60.612 55.000 0.00 0.00 39.06 4.06
418 419 1.176527 CAAAGGCCCACCACTACATG 58.823 55.000 0.00 0.00 39.06 3.21
419 420 1.072266 TCAAAGGCCCACCACTACAT 58.928 50.000 0.00 0.00 39.06 2.29
420 421 1.072266 ATCAAAGGCCCACCACTACA 58.928 50.000 0.00 0.00 39.06 2.74
421 422 1.004277 TCATCAAAGGCCCACCACTAC 59.996 52.381 0.00 0.00 39.06 2.73
422 423 1.281867 CTCATCAAAGGCCCACCACTA 59.718 52.381 0.00 0.00 39.06 2.74
423 424 0.038744 CTCATCAAAGGCCCACCACT 59.961 55.000 0.00 0.00 39.06 4.00
424 425 0.967380 CCTCATCAAAGGCCCACCAC 60.967 60.000 0.00 0.00 39.06 4.16
425 426 1.383799 CCTCATCAAAGGCCCACCA 59.616 57.895 0.00 0.00 39.06 4.17
426 427 0.967380 CACCTCATCAAAGGCCCACC 60.967 60.000 0.00 0.00 40.34 4.61
427 428 0.967380 CCACCTCATCAAAGGCCCAC 60.967 60.000 0.00 0.00 40.34 4.61
428 429 1.383799 CCACCTCATCAAAGGCCCA 59.616 57.895 0.00 0.00 40.34 5.36
429 430 2.054453 GCCACCTCATCAAAGGCCC 61.054 63.158 0.00 0.00 40.34 5.80
430 431 0.685458 ATGCCACCTCATCAAAGGCC 60.685 55.000 0.00 0.00 44.60 5.19
431 432 0.458669 CATGCCACCTCATCAAAGGC 59.541 55.000 0.00 0.00 45.41 4.35
432 433 1.475280 CACATGCCACCTCATCAAAGG 59.525 52.381 0.00 0.00 42.55 3.11
433 434 2.094906 CACACATGCCACCTCATCAAAG 60.095 50.000 0.00 0.00 0.00 2.77
434 435 1.887854 CACACATGCCACCTCATCAAA 59.112 47.619 0.00 0.00 0.00 2.69
435 436 1.536940 CACACATGCCACCTCATCAA 58.463 50.000 0.00 0.00 0.00 2.57
436 437 0.961857 GCACACATGCCACCTCATCA 60.962 55.000 0.00 0.00 46.97 3.07
437 438 1.805254 GCACACATGCCACCTCATC 59.195 57.895 0.00 0.00 46.97 2.92
438 439 4.007457 GCACACATGCCACCTCAT 57.993 55.556 0.00 0.00 46.97 2.90
448 449 7.056006 TCCTATTTATCTCAACATGCACACAT 58.944 34.615 0.00 0.00 36.79 3.21
449 450 6.413892 TCCTATTTATCTCAACATGCACACA 58.586 36.000 0.00 0.00 0.00 3.72
450 451 6.925610 TCCTATTTATCTCAACATGCACAC 57.074 37.500 0.00 0.00 0.00 3.82
451 452 8.432013 ACTATCCTATTTATCTCAACATGCACA 58.568 33.333 0.00 0.00 0.00 4.57
452 453 8.715998 CACTATCCTATTTATCTCAACATGCAC 58.284 37.037 0.00 0.00 0.00 4.57
453 454 7.879677 CCACTATCCTATTTATCTCAACATGCA 59.120 37.037 0.00 0.00 0.00 3.96
454 455 7.335422 CCCACTATCCTATTTATCTCAACATGC 59.665 40.741 0.00 0.00 0.00 4.06
455 456 7.826252 CCCCACTATCCTATTTATCTCAACATG 59.174 40.741 0.00 0.00 0.00 3.21
456 457 7.739444 TCCCCACTATCCTATTTATCTCAACAT 59.261 37.037 0.00 0.00 0.00 2.71
457 458 7.079700 TCCCCACTATCCTATTTATCTCAACA 58.920 38.462 0.00 0.00 0.00 3.33
458 459 7.554959 TCCCCACTATCCTATTTATCTCAAC 57.445 40.000 0.00 0.00 0.00 3.18
459 460 7.961431 TGATCCCCACTATCCTATTTATCTCAA 59.039 37.037 0.00 0.00 0.00 3.02
460 461 7.487338 TGATCCCCACTATCCTATTTATCTCA 58.513 38.462 0.00 0.00 0.00 3.27
461 462 7.979786 TGATCCCCACTATCCTATTTATCTC 57.020 40.000 0.00 0.00 0.00 2.75
462 463 7.964293 AGTTGATCCCCACTATCCTATTTATCT 59.036 37.037 0.00 0.00 0.00 1.98
463 464 8.152023 AGTTGATCCCCACTATCCTATTTATC 57.848 38.462 0.00 0.00 0.00 1.75
464 465 8.525729 AAGTTGATCCCCACTATCCTATTTAT 57.474 34.615 0.00 0.00 0.00 1.40
465 466 7.794683 AGAAGTTGATCCCCACTATCCTATTTA 59.205 37.037 0.00 0.00 0.00 1.40
466 467 6.621514 AGAAGTTGATCCCCACTATCCTATTT 59.378 38.462 0.00 0.00 0.00 1.40
467 468 6.153924 AGAAGTTGATCCCCACTATCCTATT 58.846 40.000 0.00 0.00 0.00 1.73
468 469 5.731924 AGAAGTTGATCCCCACTATCCTAT 58.268 41.667 0.00 0.00 0.00 2.57
469 470 5.157770 AGAAGTTGATCCCCACTATCCTA 57.842 43.478 0.00 0.00 0.00 2.94
470 471 4.014273 AGAAGTTGATCCCCACTATCCT 57.986 45.455 0.00 0.00 0.00 3.24
471 472 4.779993 AAGAAGTTGATCCCCACTATCC 57.220 45.455 0.00 0.00 0.00 2.59
472 473 6.831976 ACATAAGAAGTTGATCCCCACTATC 58.168 40.000 0.00 0.00 0.00 2.08
473 474 6.831664 ACATAAGAAGTTGATCCCCACTAT 57.168 37.500 0.00 0.00 0.00 2.12
474 475 7.931015 ATACATAAGAAGTTGATCCCCACTA 57.069 36.000 0.00 0.00 0.00 2.74
475 476 6.831664 ATACATAAGAAGTTGATCCCCACT 57.168 37.500 0.00 0.00 0.00 4.00
476 477 9.877178 CTATATACATAAGAAGTTGATCCCCAC 57.123 37.037 0.00 0.00 0.00 4.61
477 478 9.046846 CCTATATACATAAGAAGTTGATCCCCA 57.953 37.037 0.00 0.00 0.00 4.96
478 479 9.268282 TCCTATATACATAAGAAGTTGATCCCC 57.732 37.037 0.00 0.00 0.00 4.81
501 502 8.917546 AGTCTTAACTCCCTTATCCTATATCCT 58.082 37.037 0.00 0.00 0.00 3.24
502 503 9.549984 AAGTCTTAACTCCCTTATCCTATATCC 57.450 37.037 0.00 0.00 33.48 2.59
506 507 9.590828 GAGTAAGTCTTAACTCCCTTATCCTAT 57.409 37.037 0.00 0.00 36.86 2.57
507 508 7.718753 CGAGTAAGTCTTAACTCCCTTATCCTA 59.281 40.741 12.64 0.00 39.16 2.94
508 509 6.546772 CGAGTAAGTCTTAACTCCCTTATCCT 59.453 42.308 12.64 0.00 39.16 3.24
509 510 6.320926 ACGAGTAAGTCTTAACTCCCTTATCC 59.679 42.308 12.64 0.00 39.16 2.59
510 511 7.332213 ACGAGTAAGTCTTAACTCCCTTATC 57.668 40.000 12.64 0.00 39.16 1.75
511 512 7.715266 AACGAGTAAGTCTTAACTCCCTTAT 57.285 36.000 12.64 0.00 39.16 1.73
512 513 8.103305 TCTAACGAGTAAGTCTTAACTCCCTTA 58.897 37.037 12.64 9.34 39.16 2.69
513 514 6.944862 TCTAACGAGTAAGTCTTAACTCCCTT 59.055 38.462 12.64 8.94 39.16 3.95
514 515 6.374053 GTCTAACGAGTAAGTCTTAACTCCCT 59.626 42.308 12.64 0.12 39.16 4.20
515 516 6.150140 TGTCTAACGAGTAAGTCTTAACTCCC 59.850 42.308 12.64 0.00 39.16 4.30
516 517 7.138692 TGTCTAACGAGTAAGTCTTAACTCC 57.861 40.000 12.64 0.00 39.16 3.85
517 518 9.116054 CTTTGTCTAACGAGTAAGTCTTAACTC 57.884 37.037 0.00 3.60 39.00 3.01
518 519 8.628280 ACTTTGTCTAACGAGTAAGTCTTAACT 58.372 33.333 0.00 0.00 37.32 2.24
519 520 8.794308 ACTTTGTCTAACGAGTAAGTCTTAAC 57.206 34.615 0.00 0.00 0.00 2.01
520 521 9.455847 GAACTTTGTCTAACGAGTAAGTCTTAA 57.544 33.333 0.00 0.00 0.00 1.85
521 522 8.623903 TGAACTTTGTCTAACGAGTAAGTCTTA 58.376 33.333 0.00 0.00 0.00 2.10
522 523 7.486647 TGAACTTTGTCTAACGAGTAAGTCTT 58.513 34.615 0.00 0.00 0.00 3.01
523 524 7.013083 TCTGAACTTTGTCTAACGAGTAAGTCT 59.987 37.037 0.00 0.00 0.00 3.24
524 525 7.137426 TCTGAACTTTGTCTAACGAGTAAGTC 58.863 38.462 0.00 0.00 0.00 3.01
525 526 7.035840 TCTGAACTTTGTCTAACGAGTAAGT 57.964 36.000 0.00 0.00 0.00 2.24
526 527 7.648510 ACTTCTGAACTTTGTCTAACGAGTAAG 59.351 37.037 0.00 0.00 0.00 2.34
527 528 7.434307 CACTTCTGAACTTTGTCTAACGAGTAA 59.566 37.037 0.00 0.00 0.00 2.24
528 529 6.916387 CACTTCTGAACTTTGTCTAACGAGTA 59.084 38.462 0.00 0.00 0.00 2.59
529 530 5.749109 CACTTCTGAACTTTGTCTAACGAGT 59.251 40.000 0.00 0.00 0.00 4.18
530 531 5.175856 CCACTTCTGAACTTTGTCTAACGAG 59.824 44.000 0.00 0.00 0.00 4.18
531 532 5.047847 CCACTTCTGAACTTTGTCTAACGA 58.952 41.667 0.00 0.00 0.00 3.85
532 533 5.047847 TCCACTTCTGAACTTTGTCTAACG 58.952 41.667 0.00 0.00 0.00 3.18
533 534 6.761714 TCTTCCACTTCTGAACTTTGTCTAAC 59.238 38.462 0.00 0.00 0.00 2.34
534 535 6.884832 TCTTCCACTTCTGAACTTTGTCTAA 58.115 36.000 0.00 0.00 0.00 2.10
535 536 6.479972 TCTTCCACTTCTGAACTTTGTCTA 57.520 37.500 0.00 0.00 0.00 2.59
536 537 5.359194 TCTTCCACTTCTGAACTTTGTCT 57.641 39.130 0.00 0.00 0.00 3.41
537 538 6.038714 ACATTCTTCCACTTCTGAACTTTGTC 59.961 38.462 0.00 0.00 0.00 3.18
538 539 5.888161 ACATTCTTCCACTTCTGAACTTTGT 59.112 36.000 0.00 0.00 0.00 2.83
539 540 6.382869 ACATTCTTCCACTTCTGAACTTTG 57.617 37.500 0.00 0.00 0.00 2.77
540 541 7.721399 ACATACATTCTTCCACTTCTGAACTTT 59.279 33.333 0.00 0.00 0.00 2.66
541 542 7.173907 CACATACATTCTTCCACTTCTGAACTT 59.826 37.037 0.00 0.00 0.00 2.66
542 543 6.652481 CACATACATTCTTCCACTTCTGAACT 59.348 38.462 0.00 0.00 0.00 3.01
543 544 6.621596 GCACATACATTCTTCCACTTCTGAAC 60.622 42.308 0.00 0.00 0.00 3.18
544 545 5.412594 GCACATACATTCTTCCACTTCTGAA 59.587 40.000 0.00 0.00 0.00 3.02
545 546 4.937620 GCACATACATTCTTCCACTTCTGA 59.062 41.667 0.00 0.00 0.00 3.27
546 547 4.095483 GGCACATACATTCTTCCACTTCTG 59.905 45.833 0.00 0.00 0.00 3.02
547 548 4.265073 GGCACATACATTCTTCCACTTCT 58.735 43.478 0.00 0.00 0.00 2.85
548 549 3.063997 CGGCACATACATTCTTCCACTTC 59.936 47.826 0.00 0.00 0.00 3.01
549 550 3.009723 CGGCACATACATTCTTCCACTT 58.990 45.455 0.00 0.00 0.00 3.16
550 551 2.632377 CGGCACATACATTCTTCCACT 58.368 47.619 0.00 0.00 0.00 4.00
551 552 1.064060 GCGGCACATACATTCTTCCAC 59.936 52.381 0.00 0.00 0.00 4.02
552 553 1.378531 GCGGCACATACATTCTTCCA 58.621 50.000 0.00 0.00 0.00 3.53
553 554 0.663153 GGCGGCACATACATTCTTCC 59.337 55.000 3.07 0.00 0.00 3.46
554 555 0.304705 CGGCGGCACATACATTCTTC 59.695 55.000 10.53 0.00 0.00 2.87
555 556 0.392461 ACGGCGGCACATACATTCTT 60.392 50.000 13.24 0.00 0.00 2.52
556 557 0.392461 AACGGCGGCACATACATTCT 60.392 50.000 13.24 0.00 0.00 2.40
557 558 0.248054 CAACGGCGGCACATACATTC 60.248 55.000 13.24 0.00 0.00 2.67
558 559 1.800032 CAACGGCGGCACATACATT 59.200 52.632 13.24 0.00 0.00 2.71
559 560 2.760159 GCAACGGCGGCACATACAT 61.760 57.895 13.24 0.00 0.00 2.29
560 561 3.427425 GCAACGGCGGCACATACA 61.427 61.111 13.24 0.00 0.00 2.29
561 562 2.972144 TTGCAACGGCGGCACATAC 61.972 57.895 13.24 0.00 45.35 2.39
562 563 2.669910 TTGCAACGGCGGCACATA 60.670 55.556 13.24 0.00 45.35 2.29
563 564 4.341502 GTTGCAACGGCGGCACAT 62.342 61.111 14.90 0.00 45.35 3.21
573 574 0.593773 AATTGTCCGTGCGTTGCAAC 60.594 50.000 19.89 19.89 41.47 4.17
574 575 0.945099 TAATTGTCCGTGCGTTGCAA 59.055 45.000 0.00 0.00 41.47 4.08
575 576 0.945099 TTAATTGTCCGTGCGTTGCA 59.055 45.000 0.00 0.00 35.60 4.08
576 577 1.069500 AGTTAATTGTCCGTGCGTTGC 60.069 47.619 0.00 0.00 0.00 4.17
577 578 2.961522 AGTTAATTGTCCGTGCGTTG 57.038 45.000 0.00 0.00 0.00 4.10
578 579 3.656559 ACTAGTTAATTGTCCGTGCGTT 58.343 40.909 0.00 0.00 0.00 4.84
579 580 3.057033 AGACTAGTTAATTGTCCGTGCGT 60.057 43.478 0.00 0.00 34.59 5.24
580 581 3.508762 AGACTAGTTAATTGTCCGTGCG 58.491 45.455 0.00 0.00 34.59 5.34
581 582 5.888105 TCTAGACTAGTTAATTGTCCGTGC 58.112 41.667 9.33 0.00 34.59 5.34
582 583 7.310664 TGTTCTAGACTAGTTAATTGTCCGTG 58.689 38.462 9.33 0.00 34.59 4.94
583 584 7.458409 TGTTCTAGACTAGTTAATTGTCCGT 57.542 36.000 9.33 0.00 34.59 4.69
658 659 2.445525 AGGCAGGGGTTCTACTCAAAAA 59.554 45.455 0.00 0.00 0.00 1.94
659 660 2.062636 AGGCAGGGGTTCTACTCAAAA 58.937 47.619 0.00 0.00 0.00 2.44
660 661 1.351017 CAGGCAGGGGTTCTACTCAAA 59.649 52.381 0.00 0.00 0.00 2.69
661 662 0.984230 CAGGCAGGGGTTCTACTCAA 59.016 55.000 0.00 0.00 0.00 3.02
662 663 1.553690 GCAGGCAGGGGTTCTACTCA 61.554 60.000 0.00 0.00 0.00 3.41
663 664 1.222113 GCAGGCAGGGGTTCTACTC 59.778 63.158 0.00 0.00 0.00 2.59
664 665 2.301738 GGCAGGCAGGGGTTCTACT 61.302 63.158 0.00 0.00 0.00 2.57
665 666 2.258748 GAGGCAGGCAGGGGTTCTAC 62.259 65.000 0.00 0.00 0.00 2.59
666 667 1.995626 GAGGCAGGCAGGGGTTCTA 60.996 63.158 0.00 0.00 0.00 2.10
667 668 3.334054 GAGGCAGGCAGGGGTTCT 61.334 66.667 0.00 0.00 0.00 3.01
668 669 2.911926 AAGAGGCAGGCAGGGGTTC 61.912 63.158 0.00 0.00 0.00 3.62
669 670 2.860971 AAGAGGCAGGCAGGGGTT 60.861 61.111 0.00 0.00 0.00 4.11
670 671 3.655211 CAAGAGGCAGGCAGGGGT 61.655 66.667 0.00 0.00 0.00 4.95
671 672 2.720144 AAACAAGAGGCAGGCAGGGG 62.720 60.000 0.00 0.00 0.00 4.79
672 673 0.829182 AAAACAAGAGGCAGGCAGGG 60.829 55.000 0.00 0.00 0.00 4.45
673 674 1.909700 TAAAACAAGAGGCAGGCAGG 58.090 50.000 0.00 0.00 0.00 4.85
674 675 2.029918 GGTTAAAACAAGAGGCAGGCAG 60.030 50.000 0.00 0.00 0.00 4.85
675 676 1.960689 GGTTAAAACAAGAGGCAGGCA 59.039 47.619 0.00 0.00 0.00 4.75
676 677 2.029918 CAGGTTAAAACAAGAGGCAGGC 60.030 50.000 0.00 0.00 0.00 4.85
677 678 3.004734 CACAGGTTAAAACAAGAGGCAGG 59.995 47.826 0.00 0.00 0.00 4.85
678 679 3.004734 CCACAGGTTAAAACAAGAGGCAG 59.995 47.826 0.00 0.00 0.00 4.85
679 680 2.955660 CCACAGGTTAAAACAAGAGGCA 59.044 45.455 0.00 0.00 0.00 4.75
680 681 2.288213 GCCACAGGTTAAAACAAGAGGC 60.288 50.000 8.57 8.57 35.33 4.70
681 682 2.296190 GGCCACAGGTTAAAACAAGAGG 59.704 50.000 0.00 0.00 0.00 3.69
682 683 3.004734 CAGGCCACAGGTTAAAACAAGAG 59.995 47.826 5.01 0.00 0.00 2.85
683 684 2.955660 CAGGCCACAGGTTAAAACAAGA 59.044 45.455 5.01 0.00 0.00 3.02
684 685 2.693074 ACAGGCCACAGGTTAAAACAAG 59.307 45.455 5.01 0.00 0.00 3.16
685 686 2.428890 CACAGGCCACAGGTTAAAACAA 59.571 45.455 5.01 0.00 0.00 2.83
686 687 2.028130 CACAGGCCACAGGTTAAAACA 58.972 47.619 5.01 0.00 0.00 2.83
687 688 1.339929 CCACAGGCCACAGGTTAAAAC 59.660 52.381 5.01 0.00 0.00 2.43
688 689 1.698506 CCACAGGCCACAGGTTAAAA 58.301 50.000 5.01 0.00 0.00 1.52
689 690 0.178975 CCCACAGGCCACAGGTTAAA 60.179 55.000 5.01 0.00 0.00 1.52
690 691 1.063070 TCCCACAGGCCACAGGTTAA 61.063 55.000 5.01 0.00 0.00 2.01
691 692 1.462432 TCCCACAGGCCACAGGTTA 60.462 57.895 5.01 0.00 0.00 2.85
692 693 2.776526 TCCCACAGGCCACAGGTT 60.777 61.111 5.01 0.00 0.00 3.50
693 694 3.570212 GTCCCACAGGCCACAGGT 61.570 66.667 5.01 0.00 0.00 4.00
694 695 4.704833 CGTCCCACAGGCCACAGG 62.705 72.222 5.01 2.38 0.00 4.00
695 696 2.579657 TACGTCCCACAGGCCACAG 61.580 63.158 5.01 0.00 0.00 3.66
696 697 2.524640 TACGTCCCACAGGCCACA 60.525 61.111 5.01 0.00 0.00 4.17
697 698 2.047560 GTACGTCCCACAGGCCAC 60.048 66.667 5.01 0.00 0.00 5.01
698 699 3.315949 GGTACGTCCCACAGGCCA 61.316 66.667 5.01 0.00 0.00 5.36
699 700 3.310860 CTGGTACGTCCCACAGGCC 62.311 68.421 0.00 0.00 34.77 5.19
700 701 2.264794 CTGGTACGTCCCACAGGC 59.735 66.667 0.00 0.00 34.77 4.85
701 702 1.590147 GACTGGTACGTCCCACAGG 59.410 63.158 0.00 0.00 35.34 4.00
702 703 1.183030 TGGACTGGTACGTCCCACAG 61.183 60.000 15.01 1.46 46.14 3.66
703 704 0.759812 TTGGACTGGTACGTCCCACA 60.760 55.000 15.01 0.00 46.14 4.17
704 705 0.037605 CTTGGACTGGTACGTCCCAC 60.038 60.000 15.01 0.00 46.14 4.61
705 706 0.470456 ACTTGGACTGGTACGTCCCA 60.470 55.000 15.01 0.00 46.14 4.37
706 707 1.475682 CTACTTGGACTGGTACGTCCC 59.524 57.143 15.01 0.00 46.14 4.46
707 708 1.475682 CCTACTTGGACTGGTACGTCC 59.524 57.143 11.79 11.79 46.60 4.79
708 709 1.135170 GCCTACTTGGACTGGTACGTC 60.135 57.143 0.00 0.00 38.35 4.34
709 710 0.893447 GCCTACTTGGACTGGTACGT 59.107 55.000 0.00 0.00 38.35 3.57
710 711 0.179145 CGCCTACTTGGACTGGTACG 60.179 60.000 0.00 0.00 38.35 3.67
711 712 1.180029 TCGCCTACTTGGACTGGTAC 58.820 55.000 0.00 0.00 38.35 3.34
712 713 2.154567 ATCGCCTACTTGGACTGGTA 57.845 50.000 0.00 0.00 38.35 3.25
713 714 1.276622 AATCGCCTACTTGGACTGGT 58.723 50.000 0.00 0.00 38.35 4.00
714 715 3.536956 TTAATCGCCTACTTGGACTGG 57.463 47.619 0.00 0.00 38.35 4.00
715 716 4.058817 GGATTAATCGCCTACTTGGACTG 58.941 47.826 9.32 0.00 38.35 3.51
716 717 3.709653 TGGATTAATCGCCTACTTGGACT 59.290 43.478 9.32 0.00 38.35 3.85
717 718 4.058817 CTGGATTAATCGCCTACTTGGAC 58.941 47.826 9.32 0.00 38.35 4.02
718 719 3.494398 GCTGGATTAATCGCCTACTTGGA 60.494 47.826 9.32 0.00 38.35 3.53
719 720 2.808543 GCTGGATTAATCGCCTACTTGG 59.191 50.000 9.32 0.00 39.35 3.61
720 721 2.808543 GGCTGGATTAATCGCCTACTTG 59.191 50.000 20.90 3.81 39.42 3.16
721 722 2.548067 CGGCTGGATTAATCGCCTACTT 60.548 50.000 23.66 0.00 40.34 2.24
722 723 1.000955 CGGCTGGATTAATCGCCTACT 59.999 52.381 23.66 0.00 40.34 2.57
723 724 1.429463 CGGCTGGATTAATCGCCTAC 58.571 55.000 23.66 7.11 40.34 3.18
724 725 0.320421 GCGGCTGGATTAATCGCCTA 60.320 55.000 23.66 6.52 40.34 3.93
725 726 1.598130 GCGGCTGGATTAATCGCCT 60.598 57.895 23.66 0.00 40.34 5.52
726 727 2.946762 GCGGCTGGATTAATCGCC 59.053 61.111 19.17 19.17 40.44 5.54
727 728 2.244651 ACGCGGCTGGATTAATCGC 61.245 57.895 12.47 8.64 42.51 4.58
728 729 1.564622 CACGCGGCTGGATTAATCG 59.435 57.895 12.47 0.00 0.00 3.34
729 730 1.279840 GCACGCGGCTGGATTAATC 59.720 57.895 12.47 6.93 40.25 1.75
730 731 2.534019 CGCACGCGGCTGGATTAAT 61.534 57.895 12.47 0.00 41.67 1.40
731 732 3.192230 CGCACGCGGCTGGATTAA 61.192 61.111 12.47 0.00 41.67 1.40
743 744 2.813908 GAGTAGTTGGGCCGCACG 60.814 66.667 0.00 0.00 0.00 5.34
744 745 2.436115 GGAGTAGTTGGGCCGCAC 60.436 66.667 0.00 0.00 0.00 5.34
745 746 2.606519 AGGAGTAGTTGGGCCGCA 60.607 61.111 0.00 0.00 0.00 5.69
746 747 2.125106 CAGGAGTAGTTGGGCCGC 60.125 66.667 0.00 0.00 0.00 6.53
747 748 1.218316 GACAGGAGTAGTTGGGCCG 59.782 63.158 0.00 0.00 0.00 6.13
748 749 0.036294 GTGACAGGAGTAGTTGGGCC 60.036 60.000 0.00 0.00 0.00 5.80
749 750 0.389948 CGTGACAGGAGTAGTTGGGC 60.390 60.000 0.00 0.00 0.00 5.36
750 751 0.389948 GCGTGACAGGAGTAGTTGGG 60.390 60.000 0.00 0.00 0.00 4.12
751 752 0.603569 AGCGTGACAGGAGTAGTTGG 59.396 55.000 0.00 0.00 0.00 3.77
752 753 1.269723 TGAGCGTGACAGGAGTAGTTG 59.730 52.381 0.00 0.00 0.00 3.16
753 754 1.542030 CTGAGCGTGACAGGAGTAGTT 59.458 52.381 0.00 0.00 0.00 2.24
754 755 1.169577 CTGAGCGTGACAGGAGTAGT 58.830 55.000 0.00 0.00 0.00 2.73
790 792 2.027625 CACGTCGAGGGCCTTGAAC 61.028 63.158 25.16 17.02 0.00 3.18
1072 1450 2.765807 CCGCATCCCACTCCCTCT 60.766 66.667 0.00 0.00 0.00 3.69
1080 1458 2.268920 GAGAACAGCCGCATCCCA 59.731 61.111 0.00 0.00 0.00 4.37
1230 1609 4.883354 GGCATTCCCTCCCCGCAG 62.883 72.222 0.00 0.00 0.00 5.18
1236 1626 4.506255 CCCACCGGCATTCCCTCC 62.506 72.222 0.00 0.00 0.00 4.30
1238 1628 3.264845 AACCCACCGGCATTCCCT 61.265 61.111 0.00 0.00 0.00 4.20
1248 1638 2.994186 TCCTAATTAGCGAACCCACC 57.006 50.000 6.99 0.00 0.00 4.61
1258 1648 7.548097 TCGCCAGCTAGAATAATCCTAATTAG 58.452 38.462 5.43 5.43 31.02 1.73
1387 1777 4.404073 AGCTATATATGGCCTGCTACACTC 59.596 45.833 16.66 0.00 34.49 3.51
1466 1856 1.892474 GGCAAACTTGGTCATGGCTAA 59.108 47.619 0.00 0.00 35.66 3.09
1488 1887 4.741342 CCGAGTAAAATCGTTACAGGAGT 58.259 43.478 0.00 0.00 41.12 3.85
1542 1952 3.902261 TTGTGTGCAATCTGACATGAC 57.098 42.857 0.00 0.00 0.00 3.06
1561 1971 8.148351 TCAGTTCTAGCTACAATACACTTGTTT 58.852 33.333 0.00 0.00 34.11 2.83
1580 1990 4.141390 ACAAAGGGACATGTCTTCAGTTCT 60.141 41.667 24.50 8.71 0.00 3.01
1615 2025 4.423625 AGATACACATAAGGGCCTTGTC 57.576 45.455 28.88 9.13 0.00 3.18
1663 2073 6.256321 GCAAGGCATTAATTAAAGTGGACATG 59.744 38.462 1.21 0.00 0.00 3.21
1727 2137 3.181504 ACGGAACAAAATTATACAGCCGC 60.182 43.478 0.00 0.00 39.79 6.53
1756 2166 8.485578 TTTAACTGGATTCACCTACCAAAAAT 57.514 30.769 0.00 0.00 39.86 1.82
1781 2192 6.890268 TCAGTCCCGAGCATATAGTGTTATAT 59.110 38.462 0.00 0.00 33.65 0.86
1809 2220 1.470112 GCCCTCTTCTCGTACAAGAGC 60.470 57.143 13.46 3.84 43.87 4.09
1818 2229 2.580867 CGAAGCGCCCTCTTCTCG 60.581 66.667 2.29 0.00 40.11 4.04
2105 2516 0.038310 AAGCTTACCCAGACAAGCCC 59.962 55.000 0.00 0.00 46.70 5.19
2202 2613 8.907222 ACAAGAAATGCACTTTCCATAAATTT 57.093 26.923 14.21 0.00 43.66 1.82
2229 2640 2.159057 GCCCCCTGTAAAATCTGCAATG 60.159 50.000 0.00 0.00 0.00 2.82
2258 2669 2.107552 TGGAAGATTTCGTCCCCAAAGT 59.892 45.455 9.59 0.00 42.72 2.66
2446 2858 9.372369 GCAAGATTTAATTCACTCTAGTACTGT 57.628 33.333 5.39 0.00 0.00 3.55
2452 2864 8.273780 ACCAAGCAAGATTTAATTCACTCTAG 57.726 34.615 0.56 0.00 0.00 2.43
2506 2918 7.456902 AGTCTTACATTTCTTTACAGAGGGGTA 59.543 37.037 0.00 0.00 0.00 3.69
2507 2919 6.272558 AGTCTTACATTTCTTTACAGAGGGGT 59.727 38.462 0.00 0.00 0.00 4.95
2508 2920 6.595716 CAGTCTTACATTTCTTTACAGAGGGG 59.404 42.308 0.00 0.00 0.00 4.79
2569 2985 7.235812 ACTCCCTCTGTAAAGAAATGTAAGACT 59.764 37.037 0.00 0.00 0.00 3.24
2671 3087 7.231467 ACAAAAGGTGGACACTATTGACTATT 58.769 34.615 16.26 0.00 0.00 1.73
2672 3088 6.779860 ACAAAAGGTGGACACTATTGACTAT 58.220 36.000 16.26 0.00 0.00 2.12
2673 3089 6.042781 AGACAAAAGGTGGACACTATTGACTA 59.957 38.462 16.26 0.00 29.97 2.59
2674 3090 5.048846 ACAAAAGGTGGACACTATTGACT 57.951 39.130 16.26 0.00 0.00 3.41
2675 3091 5.063880 AGACAAAAGGTGGACACTATTGAC 58.936 41.667 16.26 12.26 0.00 3.18
2676 3092 5.304686 AGACAAAAGGTGGACACTATTGA 57.695 39.130 16.26 0.00 0.00 2.57
2677 3093 5.299279 ACAAGACAAAAGGTGGACACTATTG 59.701 40.000 2.13 7.81 0.00 1.90
2703 3119 6.114187 TCACTGAGTAGAACAAATGACCAT 57.886 37.500 0.00 0.00 0.00 3.55
2749 3165 7.714377 AGATAACTTTCCATGTATCAGAAGCAG 59.286 37.037 0.00 0.00 0.00 4.24
2872 3288 8.216423 ACATTATCATAGAAACTGCAGGAGAAT 58.784 33.333 19.93 9.50 0.00 2.40
2874 3290 7.129457 ACATTATCATAGAAACTGCAGGAGA 57.871 36.000 19.93 5.15 0.00 3.71
2875 3291 7.798596 AACATTATCATAGAAACTGCAGGAG 57.201 36.000 19.93 0.00 0.00 3.69
3059 3478 5.529060 AGCCTTTTTGTTGTACAGAGAAGAG 59.471 40.000 0.00 0.00 0.00 2.85
3093 3512 4.046938 ACAGTCGCATCCTTACATGTAG 57.953 45.455 5.56 0.93 0.00 2.74
3408 3830 7.917505 AGCTTTCAAGAATGTACAACAGAAAAG 59.082 33.333 0.00 7.50 0.00 2.27
3567 3992 1.270518 GCTGAGTGCCTCTGAGAAACA 60.271 52.381 6.17 0.00 32.36 2.83
3587 4012 6.231211 ACTCAGAACTGTGGGTAAAATACTG 58.769 40.000 8.39 0.00 0.00 2.74
3622 4047 7.320399 ACTACAAATCACTCACATTCGTCATA 58.680 34.615 0.00 0.00 0.00 2.15
3630 4055 6.013725 TCCCTACAACTACAAATCACTCACAT 60.014 38.462 0.00 0.00 0.00 3.21
3671 4096 5.527582 AGAACATACAAATCCTTCATACGGC 59.472 40.000 0.00 0.00 0.00 5.68
3674 4099 8.969267 CGTCTAGAACATACAAATCCTTCATAC 58.031 37.037 0.00 0.00 0.00 2.39
3739 4164 2.034179 GTCTGTAACCAAGGTGCCAAAC 59.966 50.000 0.00 0.00 0.00 2.93
3758 4183 2.256117 AACACACCAGGCTGTAAGTC 57.744 50.000 14.43 0.00 40.46 3.01
3759 4184 2.729028 AAACACACCAGGCTGTAAGT 57.271 45.000 14.43 5.84 35.30 2.24
3760 4185 2.948979 TGAAAACACACCAGGCTGTAAG 59.051 45.455 14.43 5.17 0.00 2.34
3813 4238 7.322664 ACAAAATGACATTTTCTCACACAACT 58.677 30.769 20.73 0.00 40.27 3.16
3881 4306 0.447801 CCAGTTTTCATCCTTCGCGG 59.552 55.000 6.13 0.00 0.00 6.46
3882 4307 1.438651 TCCAGTTTTCATCCTTCGCG 58.561 50.000 0.00 0.00 0.00 5.87
3947 4372 5.324409 ACTTGCAAGGGAATTTGATCACTA 58.676 37.500 29.18 0.00 29.79 2.74
3948 4373 4.154942 ACTTGCAAGGGAATTTGATCACT 58.845 39.130 29.18 0.93 33.45 3.41
3949 4374 4.525912 ACTTGCAAGGGAATTTGATCAC 57.474 40.909 29.18 0.00 0.00 3.06
3993 4420 3.490348 AGTATCCAAAGTGTTGCTTGCT 58.510 40.909 0.00 0.00 37.52 3.91
3995 4422 4.756642 TGAGAGTATCCAAAGTGTTGCTTG 59.243 41.667 0.00 0.00 34.30 4.01
3999 4426 7.678947 AGAAATGAGAGTATCCAAAGTGTTG 57.321 36.000 0.00 0.00 33.66 3.33
4105 4532 8.633075 TTGAAACTGTCAATGTTTTCTTCATC 57.367 30.769 0.00 0.00 41.47 2.92
4131 4562 4.884744 TGCACTTAACTTGTAGCAGGAAAA 59.115 37.500 0.00 0.00 0.00 2.29
4134 4565 3.664107 CTGCACTTAACTTGTAGCAGGA 58.336 45.455 0.00 0.00 44.10 3.86
4136 4567 3.664107 TCCTGCACTTAACTTGTAGCAG 58.336 45.455 0.00 0.00 46.55 4.24
4137 4568 3.762407 TCCTGCACTTAACTTGTAGCA 57.238 42.857 0.00 0.00 0.00 3.49
4138 4569 5.181245 TGAATTCCTGCACTTAACTTGTAGC 59.819 40.000 2.27 0.00 0.00 3.58
4139 4570 6.428159 ACTGAATTCCTGCACTTAACTTGTAG 59.572 38.462 2.27 0.00 0.00 2.74
4167 4680 4.220821 TCATCTTCCACACCTCAGAACTAC 59.779 45.833 0.00 0.00 0.00 2.73
4170 4683 3.685139 TCATCTTCCACACCTCAGAAC 57.315 47.619 0.00 0.00 0.00 3.01
4186 4699 3.251729 TGCAGCTGAAACACTTCTTCATC 59.748 43.478 20.43 0.00 32.53 2.92
4238 4752 3.188460 GTGAAGATCGCAGCCAACTAAAA 59.812 43.478 0.00 0.00 0.00 1.52
4239 4753 2.742053 GTGAAGATCGCAGCCAACTAAA 59.258 45.455 0.00 0.00 0.00 1.85
4240 4754 2.346803 GTGAAGATCGCAGCCAACTAA 58.653 47.619 0.00 0.00 0.00 2.24
4241 4755 1.735700 CGTGAAGATCGCAGCCAACTA 60.736 52.381 0.00 0.00 0.00 2.24
4242 4756 1.016130 CGTGAAGATCGCAGCCAACT 61.016 55.000 0.00 0.00 0.00 3.16
4243 4757 1.291877 ACGTGAAGATCGCAGCCAAC 61.292 55.000 0.00 0.00 0.00 3.77
4321 4835 1.517257 GATCGGGACTGACGTGCTG 60.517 63.158 0.00 0.00 39.03 4.41
4492 5006 0.542702 CCAGGTTCAAGGTGGCCAAT 60.543 55.000 7.24 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.