Multiple sequence alignment - TraesCS5A01G352000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G352000 chr5A 100.000 5729 0 0 1 5729 554239425 554233697 0.000000e+00 10580.0
1 TraesCS5A01G352000 chr5A 95.084 1363 51 10 3095 4445 554218854 554217496 0.000000e+00 2132.0
2 TraesCS5A01G352000 chr5A 91.251 1303 100 4 945 2247 554221266 554219978 0.000000e+00 1762.0
3 TraesCS5A01G352000 chr5A 82.310 1775 246 47 3117 4851 554201452 554199706 0.000000e+00 1476.0
4 TraesCS5A01G352000 chr5A 82.781 1690 215 45 3243 4904 554182807 554181166 0.000000e+00 1439.0
5 TraesCS5A01G352000 chr5A 79.096 1947 338 41 918 2846 554185100 554183205 0.000000e+00 1277.0
6 TraesCS5A01G352000 chr5A 79.586 1499 249 38 3261 4734 554083182 554081716 0.000000e+00 1020.0
7 TraesCS5A01G352000 chr5A 79.771 1399 231 34 3355 4734 553538906 553537541 0.000000e+00 968.0
8 TraesCS5A01G352000 chr5A 87.871 808 65 20 2279 3062 554219646 554218848 0.000000e+00 918.0
9 TraesCS5A01G352000 chr5A 78.566 1423 260 30 936 2329 554203802 554202396 0.000000e+00 896.0
10 TraesCS5A01G352000 chr5A 87.818 550 50 7 4440 4988 554212318 554211785 3.770000e-176 628.0
11 TraesCS5A01G352000 chr5D 93.776 4997 225 33 48 4988 438725612 438720646 0.000000e+00 7426.0
12 TraesCS5A01G352000 chr5D 94.832 3425 111 20 801 4208 438660926 438657551 0.000000e+00 5284.0
13 TraesCS5A01G352000 chr5D 82.053 1861 255 51 3106 4932 438569614 438567799 0.000000e+00 1513.0
14 TraesCS5A01G352000 chr5D 82.211 1782 247 49 3102 4846 438589794 438588046 0.000000e+00 1471.0
15 TraesCS5A01G352000 chr5D 80.040 1493 248 32 3254 4728 438455211 438453751 0.000000e+00 1061.0
16 TraesCS5A01G352000 chr5D 78.481 1501 296 18 936 2421 438592040 438590552 0.000000e+00 957.0
17 TraesCS5A01G352000 chr5D 88.295 786 56 15 48 808 438661723 438660949 0.000000e+00 909.0
18 TraesCS5A01G352000 chr5D 87.084 751 71 12 4198 4934 438624318 438623580 0.000000e+00 826.0
19 TraesCS5A01G352000 chr5D 86.621 583 74 3 920 1502 437568876 437568298 4.840000e-180 641.0
20 TraesCS5A01G352000 chr5D 78.596 855 144 20 2110 2936 438570691 438569848 3.930000e-146 529.0
21 TraesCS5A01G352000 chr5D 100.000 28 0 0 5130 5157 438578790 438578763 1.000000e-02 52.8
22 TraesCS5A01G352000 chr5B 95.796 4091 141 14 801 4883 533575507 533571440 0.000000e+00 6573.0
23 TraesCS5A01G352000 chr5B 88.974 1959 186 16 801 2752 533525463 533523528 0.000000e+00 2394.0
24 TraesCS5A01G352000 chr5B 91.541 1655 109 12 3243 4874 533515387 533513741 0.000000e+00 2252.0
25 TraesCS5A01G352000 chr5B 89.014 1420 112 15 3485 4886 533565266 533563873 0.000000e+00 1718.0
26 TraesCS5A01G352000 chr5B 85.570 1580 189 21 900 2462 533567931 533566374 0.000000e+00 1618.0
27 TraesCS5A01G352000 chr5B 82.661 1759 239 41 3172 4906 533451460 533449744 0.000000e+00 1498.0
28 TraesCS5A01G352000 chr5B 81.772 1783 250 54 3102 4846 533494384 533492639 0.000000e+00 1423.0
29 TraesCS5A01G352000 chr5B 80.259 1388 248 22 1532 2905 533473898 533472523 0.000000e+00 1022.0
30 TraesCS5A01G352000 chr5B 79.190 1408 259 23 936 2325 533496627 533495236 0.000000e+00 946.0
31 TraesCS5A01G352000 chr5B 88.510 792 56 16 49 811 533576312 533575527 0.000000e+00 926.0
32 TraesCS5A01G352000 chr5B 86.710 617 36 20 206 808 533526070 533525486 1.350000e-180 643.0
33 TraesCS5A01G352000 chr5B 89.139 488 24 16 4877 5347 533571362 533570887 1.070000e-161 580.0
34 TraesCS5A01G352000 chr5B 92.481 399 30 0 3102 3500 533565679 533565281 6.440000e-159 571.0
35 TraesCS5A01G352000 chr5B 82.456 570 63 19 2492 3054 533566370 533565831 1.120000e-126 464.0
36 TraesCS5A01G352000 chr5B 86.391 338 15 10 5037 5347 533563450 533563117 1.980000e-89 340.0
37 TraesCS5A01G352000 chr5B 90.066 151 14 1 48 197 533526286 533526136 1.630000e-45 195.0
38 TraesCS5A01G352000 chr5B 91.667 132 8 3 3107 3238 533519163 533519035 4.560000e-41 180.0
39 TraesCS5A01G352000 chr5B 88.136 59 2 3 5010 5067 533563501 533563447 1.330000e-06 65.8
40 TraesCS5A01G352000 chr2A 78.279 1464 233 57 3335 4745 14703638 14702207 0.000000e+00 863.0
41 TraesCS5A01G352000 chr2A 76.686 1587 296 51 3203 4745 14721274 14719718 0.000000e+00 813.0
42 TraesCS5A01G352000 chr2D 97.452 314 8 0 5414 5727 23157623 23157310 2.350000e-148 536.0
43 TraesCS5A01G352000 chr2D 85.714 77 6 4 676 748 12635028 12634953 6.160000e-10 76.8
44 TraesCS5A01G352000 chr2B 74.275 1310 301 27 962 2256 20143786 20145074 2.370000e-143 520.0
45 TraesCS5A01G352000 chr3D 71.930 1254 264 62 1008 2226 7501538 7500338 9.400000e-73 285.0
46 TraesCS5A01G352000 chr7A 100.000 31 0 0 4952 4982 316012919 316012949 2.230000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G352000 chr5A 554233697 554239425 5728 True 10580.000000 10580 100.000000 1 5729 1 chr5A.!!$R4 5728
1 TraesCS5A01G352000 chr5A 554217496 554221266 3770 True 1604.000000 2132 91.402000 945 4445 3 chr5A.!!$R7 3500
2 TraesCS5A01G352000 chr5A 554181166 554185100 3934 True 1358.000000 1439 80.938500 918 4904 2 chr5A.!!$R5 3986
3 TraesCS5A01G352000 chr5A 554199706 554203802 4096 True 1186.000000 1476 80.438000 936 4851 2 chr5A.!!$R6 3915
4 TraesCS5A01G352000 chr5A 554081716 554083182 1466 True 1020.000000 1020 79.586000 3261 4734 1 chr5A.!!$R2 1473
5 TraesCS5A01G352000 chr5A 553537541 553538906 1365 True 968.000000 968 79.771000 3355 4734 1 chr5A.!!$R1 1379
6 TraesCS5A01G352000 chr5A 554211785 554212318 533 True 628.000000 628 87.818000 4440 4988 1 chr5A.!!$R3 548
7 TraesCS5A01G352000 chr5D 438720646 438725612 4966 True 7426.000000 7426 93.776000 48 4988 1 chr5D.!!$R5 4940
8 TraesCS5A01G352000 chr5D 438657551 438661723 4172 True 3096.500000 5284 91.563500 48 4208 2 chr5D.!!$R8 4160
9 TraesCS5A01G352000 chr5D 438588046 438592040 3994 True 1214.000000 1471 80.346000 936 4846 2 chr5D.!!$R7 3910
10 TraesCS5A01G352000 chr5D 438453751 438455211 1460 True 1061.000000 1061 80.040000 3254 4728 1 chr5D.!!$R2 1474
11 TraesCS5A01G352000 chr5D 438567799 438570691 2892 True 1021.000000 1513 80.324500 2110 4932 2 chr5D.!!$R6 2822
12 TraesCS5A01G352000 chr5D 438623580 438624318 738 True 826.000000 826 87.084000 4198 4934 1 chr5D.!!$R4 736
13 TraesCS5A01G352000 chr5D 437568298 437568876 578 True 641.000000 641 86.621000 920 1502 1 chr5D.!!$R1 582
14 TraesCS5A01G352000 chr5B 533449744 533451460 1716 True 1498.000000 1498 82.661000 3172 4906 1 chr5B.!!$R1 1734
15 TraesCS5A01G352000 chr5B 533563117 533576312 13195 True 1428.422222 6573 88.610333 49 5347 9 chr5B.!!$R6 5298
16 TraesCS5A01G352000 chr5B 533513741 533519163 5422 True 1216.000000 2252 91.604000 3107 4874 2 chr5B.!!$R4 1767
17 TraesCS5A01G352000 chr5B 533492639 533496627 3988 True 1184.500000 1423 80.481000 936 4846 2 chr5B.!!$R3 3910
18 TraesCS5A01G352000 chr5B 533523528 533526286 2758 True 1077.333333 2394 88.583333 48 2752 3 chr5B.!!$R5 2704
19 TraesCS5A01G352000 chr5B 533472523 533473898 1375 True 1022.000000 1022 80.259000 1532 2905 1 chr5B.!!$R2 1373
20 TraesCS5A01G352000 chr2A 14702207 14703638 1431 True 863.000000 863 78.279000 3335 4745 1 chr2A.!!$R1 1410
21 TraesCS5A01G352000 chr2A 14719718 14721274 1556 True 813.000000 813 76.686000 3203 4745 1 chr2A.!!$R2 1542
22 TraesCS5A01G352000 chr2B 20143786 20145074 1288 False 520.000000 520 74.275000 962 2256 1 chr2B.!!$F1 1294
23 TraesCS5A01G352000 chr3D 7500338 7501538 1200 True 285.000000 285 71.930000 1008 2226 1 chr3D.!!$R1 1218

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
224 286 0.244450 CACCAGCGACATTGCCATTT 59.756 50.000 0.00 0.0 34.65 2.32 F
562 637 0.247736 AGGCTGACACTTCGCCTTAG 59.752 55.000 0.18 0.0 44.39 2.18 F
2084 2230 0.179000 ATGAAGTCGCCTGATGGGTC 59.821 55.000 0.00 0.0 37.43 4.46 F
2229 2387 1.148273 GTGCTTGGTGTGGTCTGGA 59.852 57.895 0.00 0.0 0.00 3.86 F
2261 2419 2.361230 GGGAAAGGTTGGGGAGCG 60.361 66.667 0.00 0.0 0.00 5.03 F
4058 8592 2.096819 GGCGATAACTTGGAAAATGCGA 59.903 45.455 0.00 0.0 0.00 5.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1507 1629 0.982704 CTGGGGCCTCTCCATGATAG 59.017 60.000 3.07 0.0 36.21 2.08 R
2261 2419 0.739561 ATAGAGTGTCTCGCCGGTTC 59.260 55.000 1.90 0.0 35.36 3.62 R
4054 8588 1.202830 ACAAGGTGTTGGGTATTCGCA 60.203 47.619 0.00 0.0 38.07 5.10 R
4055 8589 1.530323 ACAAGGTGTTGGGTATTCGC 58.470 50.000 0.00 0.0 38.07 4.70 R
4201 8741 3.056465 CAGACTTGGTAGAGAAGACACCC 60.056 52.174 0.00 0.0 0.00 4.61 R
5649 18103 0.035630 CTGGGTGGGAAGAGCTGAAG 60.036 60.000 0.00 0.0 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.731275 ATCCAATTTTTGAGTGATATGTACGA 57.269 30.769 0.00 0.00 0.00 3.43
26 27 8.196802 TCCAATTTTTGAGTGATATGTACGAG 57.803 34.615 0.00 0.00 0.00 4.18
27 28 7.279981 TCCAATTTTTGAGTGATATGTACGAGG 59.720 37.037 0.00 0.00 0.00 4.63
28 29 7.065803 CCAATTTTTGAGTGATATGTACGAGGT 59.934 37.037 0.00 0.00 0.00 3.85
29 30 8.450964 CAATTTTTGAGTGATATGTACGAGGTT 58.549 33.333 0.00 0.00 0.00 3.50
30 31 6.961359 TTTTGAGTGATATGTACGAGGTTG 57.039 37.500 0.00 0.00 0.00 3.77
31 32 4.649088 TGAGTGATATGTACGAGGTTGG 57.351 45.455 0.00 0.00 0.00 3.77
32 33 3.181479 TGAGTGATATGTACGAGGTTGGC 60.181 47.826 0.00 0.00 0.00 4.52
33 34 2.764010 AGTGATATGTACGAGGTTGGCA 59.236 45.455 0.00 0.00 0.00 4.92
34 35 3.123804 GTGATATGTACGAGGTTGGCAG 58.876 50.000 0.00 0.00 0.00 4.85
35 36 3.028130 TGATATGTACGAGGTTGGCAGA 58.972 45.455 0.00 0.00 0.00 4.26
36 37 3.641436 TGATATGTACGAGGTTGGCAGAT 59.359 43.478 0.00 0.00 0.00 2.90
37 38 4.830600 TGATATGTACGAGGTTGGCAGATA 59.169 41.667 0.00 0.00 0.00 1.98
38 39 3.735237 ATGTACGAGGTTGGCAGATAG 57.265 47.619 0.00 0.00 0.00 2.08
39 40 2.730382 TGTACGAGGTTGGCAGATAGA 58.270 47.619 0.00 0.00 0.00 1.98
40 41 2.426024 TGTACGAGGTTGGCAGATAGAC 59.574 50.000 0.00 0.00 0.00 2.59
41 42 1.853963 ACGAGGTTGGCAGATAGACT 58.146 50.000 0.00 0.00 0.00 3.24
42 43 1.751924 ACGAGGTTGGCAGATAGACTC 59.248 52.381 0.00 0.00 0.00 3.36
43 44 1.067821 CGAGGTTGGCAGATAGACTCC 59.932 57.143 0.00 0.00 0.00 3.85
44 45 1.067821 GAGGTTGGCAGATAGACTCCG 59.932 57.143 0.00 0.00 0.00 4.63
45 46 0.824759 GGTTGGCAGATAGACTCCGT 59.175 55.000 0.00 0.00 0.00 4.69
46 47 1.207329 GGTTGGCAGATAGACTCCGTT 59.793 52.381 0.00 0.00 0.00 4.44
79 80 4.219033 CAGTTCAAAATAATATCGCGGCC 58.781 43.478 6.13 0.00 0.00 6.13
103 104 1.128692 GAAGTGCGTCCAATTTCTCCG 59.871 52.381 0.00 0.00 27.98 4.63
118 119 4.406648 TTCTCCGTATTGATCACATGCT 57.593 40.909 0.00 0.00 0.00 3.79
127 128 2.610433 TGATCACATGCTGTTCTCGTC 58.390 47.619 0.00 0.00 0.00 4.20
136 137 1.197721 GCTGTTCTCGTCCATGGTTTG 59.802 52.381 12.58 2.88 0.00 2.93
224 286 0.244450 CACCAGCGACATTGCCATTT 59.756 50.000 0.00 0.00 34.65 2.32
231 293 3.056607 AGCGACATTGCCATTTTAAGCTT 60.057 39.130 3.48 3.48 34.65 3.74
255 317 1.749634 AGTACCGTATGTGGACAGCTC 59.250 52.381 0.00 0.00 0.00 4.09
282 344 4.038522 TGTCAACTCCAAGACTCTCTCAAG 59.961 45.833 0.00 0.00 35.81 3.02
356 419 4.120244 ACGTGAGTGCTGGATCCT 57.880 55.556 14.23 0.00 46.97 3.24
399 462 3.572604 AACGCTGTTCTAGTAGTGGAC 57.427 47.619 0.00 0.00 0.00 4.02
442 509 5.775686 ACAAATGGACACAATGTCTGATTG 58.224 37.500 8.75 12.03 46.19 2.67
504 579 4.039852 GGGGTGAACTTGCAAGGATTTTTA 59.960 41.667 29.18 9.39 0.00 1.52
508 583 7.254761 GGGTGAACTTGCAAGGATTTTTAAAAG 60.255 37.037 29.18 1.32 0.00 2.27
562 637 0.247736 AGGCTGACACTTCGCCTTAG 59.752 55.000 0.18 0.00 44.39 2.18
737 812 3.195698 GCATCCCAACTCCGACGC 61.196 66.667 0.00 0.00 0.00 5.19
738 813 2.579201 CATCCCAACTCCGACGCT 59.421 61.111 0.00 0.00 0.00 5.07
882 987 9.984190 TTACTCCTAGTTTTTGTTTTGTTTTGT 57.016 25.926 0.00 0.00 0.00 2.83
930 1035 7.394359 AGTTATCGTAACTAGTTAGTTGGACCA 59.606 37.037 15.68 0.00 45.44 4.02
976 1083 1.182667 TCAGTCGATGGATTGGTCGT 58.817 50.000 0.50 0.00 38.85 4.34
990 1103 1.528292 GGTCGTCTCTCACCAGCTGT 61.528 60.000 13.81 0.00 32.33 4.40
1004 1117 1.134699 CAGCTGTACCACGGTCATGAT 60.135 52.381 5.25 0.00 0.00 2.45
1005 1118 1.137086 AGCTGTACCACGGTCATGATC 59.863 52.381 0.00 0.00 0.00 2.92
1006 1119 1.806623 GCTGTACCACGGTCATGATCC 60.807 57.143 0.00 1.25 0.00 3.36
2084 2230 0.179000 ATGAAGTCGCCTGATGGGTC 59.821 55.000 0.00 0.00 37.43 4.46
2098 2244 5.393461 CCTGATGGGTCTTTGTTTATTGCTC 60.393 44.000 0.00 0.00 0.00 4.26
2206 2362 2.737376 GGTTCGGAGGACACGTGC 60.737 66.667 17.22 8.51 0.00 5.34
2229 2387 1.148273 GTGCTTGGTGTGGTCTGGA 59.852 57.895 0.00 0.00 0.00 3.86
2261 2419 2.361230 GGGAAAGGTTGGGGAGCG 60.361 66.667 0.00 0.00 0.00 5.03
2262 2420 2.754375 GGAAAGGTTGGGGAGCGA 59.246 61.111 0.00 0.00 0.00 4.93
2522 3030 5.066375 TCTGGTAGTTGCACAAATATCATGC 59.934 40.000 4.46 0.00 32.49 4.06
2978 3743 4.336993 TGTTAGACAAACCACATTCGCTTT 59.663 37.500 0.00 0.00 37.27 3.51
3010 3778 9.055248 GCTTCATATTCATGCAATCGTAATAAC 57.945 33.333 0.00 0.00 31.73 1.89
3306 7804 5.985530 GGGACAATGCAAAAGAATATAAGGC 59.014 40.000 0.00 0.00 0.00 4.35
3876 8396 5.294734 AGAAAATTGCTGTTGGATTGGTT 57.705 34.783 0.00 0.00 0.00 3.67
4047 8581 3.458189 CGAGGATCTTTGGCGATAACTT 58.542 45.455 0.00 0.00 0.00 2.66
4048 8582 3.246226 CGAGGATCTTTGGCGATAACTTG 59.754 47.826 0.00 0.00 0.00 3.16
4049 8583 3.545703 AGGATCTTTGGCGATAACTTGG 58.454 45.455 0.00 0.00 0.00 3.61
4050 8584 3.199946 AGGATCTTTGGCGATAACTTGGA 59.800 43.478 0.00 0.00 0.00 3.53
4051 8585 3.945285 GGATCTTTGGCGATAACTTGGAA 59.055 43.478 0.00 0.00 0.00 3.53
4052 8586 4.398044 GGATCTTTGGCGATAACTTGGAAA 59.602 41.667 0.00 0.00 0.00 3.13
4053 8587 5.105917 GGATCTTTGGCGATAACTTGGAAAA 60.106 40.000 0.00 0.00 0.00 2.29
4054 8588 5.975693 TCTTTGGCGATAACTTGGAAAAT 57.024 34.783 0.00 0.00 0.00 1.82
4055 8589 5.708948 TCTTTGGCGATAACTTGGAAAATG 58.291 37.500 0.00 0.00 0.00 2.32
4056 8590 3.502191 TGGCGATAACTTGGAAAATGC 57.498 42.857 0.00 0.00 0.00 3.56
4057 8591 2.159448 TGGCGATAACTTGGAAAATGCG 60.159 45.455 0.00 0.00 0.00 4.73
4058 8592 2.096819 GGCGATAACTTGGAAAATGCGA 59.903 45.455 0.00 0.00 0.00 5.10
4059 8593 3.426963 GGCGATAACTTGGAAAATGCGAA 60.427 43.478 0.00 0.00 0.00 4.70
4060 8594 4.351192 GCGATAACTTGGAAAATGCGAAT 58.649 39.130 0.00 0.00 0.00 3.34
4070 8604 3.507786 GAAAATGCGAATACCCAACACC 58.492 45.455 0.00 0.00 0.00 4.16
4201 8741 2.492012 GCTCCTGAGTATGCAATGGAG 58.508 52.381 12.51 12.51 42.68 3.86
4462 16593 3.389329 GGAAGATAGGACCAATGAGCTGA 59.611 47.826 0.00 0.00 0.00 4.26
4533 16670 3.141398 CCATGTAGCACTCTTGTGTGTT 58.859 45.455 5.02 1.97 45.44 3.32
4595 16732 2.298163 TGTTTGTCCTAGAGAACGGGAC 59.702 50.000 0.00 0.00 46.80 4.46
4659 16796 0.657312 CGAGACAAAGTGCTGCAACA 59.343 50.000 2.77 0.00 0.00 3.33
4682 16819 6.373774 ACAAATCAGATCAGAACTGACATTCC 59.626 38.462 12.35 0.00 45.19 3.01
4698 16835 0.669318 TTCCGACATCCGTGAACAGC 60.669 55.000 0.00 0.00 36.31 4.40
4766 16910 6.683974 TTTAGCTGTATTGAAATGCTCTCC 57.316 37.500 0.00 0.00 35.47 3.71
4887 17168 7.827819 TCATGTGTTGCTTAGTAGTCATTAC 57.172 36.000 0.00 0.00 0.00 1.89
4888 17169 7.611770 TCATGTGTTGCTTAGTAGTCATTACT 58.388 34.615 0.00 0.00 44.71 2.24
4889 17170 8.745590 TCATGTGTTGCTTAGTAGTCATTACTA 58.254 33.333 0.00 0.00 42.57 1.82
5014 17295 5.590818 ACTCCCTTTTGATACAGAGGACTA 58.409 41.667 0.00 0.00 0.00 2.59
5015 17296 6.206042 ACTCCCTTTTGATACAGAGGACTAT 58.794 40.000 0.00 0.00 0.00 2.12
5016 17297 7.363031 ACTCCCTTTTGATACAGAGGACTATA 58.637 38.462 0.00 0.00 0.00 1.31
5018 17299 8.195165 TCCCTTTTGATACAGAGGACTATATG 57.805 38.462 0.00 0.00 0.00 1.78
5019 17300 7.789831 TCCCTTTTGATACAGAGGACTATATGT 59.210 37.037 0.00 0.00 0.00 2.29
5020 17301 8.432805 CCCTTTTGATACAGAGGACTATATGTT 58.567 37.037 0.00 0.00 0.00 2.71
5024 17305 9.877222 TTTGATACAGAGGACTATATGTTAGGA 57.123 33.333 0.00 0.00 0.00 2.94
5030 17311 9.616156 ACAGAGGACTATATGTTAGGATATACG 57.384 37.037 0.00 0.00 0.00 3.06
5069 17496 0.108585 GGACAGCAACCCTCTTGTCA 59.891 55.000 5.91 0.00 0.00 3.58
5075 17502 2.158475 AGCAACCCTCTTGTCAATTGGA 60.158 45.455 5.42 0.00 0.00 3.53
5082 17509 4.015084 CCTCTTGTCAATTGGATGAGCTT 58.985 43.478 5.42 0.00 0.00 3.74
5083 17510 4.096081 CCTCTTGTCAATTGGATGAGCTTC 59.904 45.833 5.42 0.00 0.00 3.86
5102 17529 3.634397 TCCTCCTGCTAACATTTCTGG 57.366 47.619 0.00 0.00 0.00 3.86
5104 17531 2.356535 CCTCCTGCTAACATTTCTGGCT 60.357 50.000 0.00 0.00 0.00 4.75
5105 17532 3.350833 CTCCTGCTAACATTTCTGGCTT 58.649 45.455 0.00 0.00 0.00 4.35
5219 17646 7.587037 TTTTCAACTCTCCACAGAAATTCAT 57.413 32.000 0.00 0.00 0.00 2.57
5220 17647 6.808008 TTCAACTCTCCACAGAAATTCATC 57.192 37.500 0.00 0.00 0.00 2.92
5251 17705 2.270205 CTAGTGCCTGCCTGTGGG 59.730 66.667 0.00 0.00 0.00 4.61
5277 17731 5.455849 CGTGACTATAGTACTTGCACACATC 59.544 44.000 17.16 0.00 0.00 3.06
5325 17779 7.559590 ACAAAACTCTGAATATGATACAGGC 57.440 36.000 0.00 0.00 33.19 4.85
5347 17801 5.522097 GGCTAGAGTAAAAGCATCTCTGAAC 59.478 44.000 0.00 0.00 40.61 3.18
5348 17802 6.102663 GCTAGAGTAAAAGCATCTCTGAACA 58.897 40.000 0.00 0.00 38.71 3.18
5349 17803 6.760770 GCTAGAGTAAAAGCATCTCTGAACAT 59.239 38.462 0.00 0.00 38.71 2.71
5350 17804 6.981762 AGAGTAAAAGCATCTCTGAACATG 57.018 37.500 0.00 0.00 37.20 3.21
5351 17805 5.353678 AGAGTAAAAGCATCTCTGAACATGC 59.646 40.000 11.53 11.53 44.96 4.06
5352 17806 3.863142 AAAAGCATCTCTGAACATGCC 57.137 42.857 14.53 0.00 45.63 4.40
5353 17807 1.376543 AAGCATCTCTGAACATGCCG 58.623 50.000 14.53 0.00 45.63 5.69
5354 17808 0.538584 AGCATCTCTGAACATGCCGA 59.461 50.000 14.53 0.00 45.63 5.54
5355 17809 1.140452 AGCATCTCTGAACATGCCGAT 59.860 47.619 14.53 0.00 45.63 4.18
5356 17810 1.945394 GCATCTCTGAACATGCCGATT 59.055 47.619 9.19 0.00 39.70 3.34
5357 17811 2.032204 GCATCTCTGAACATGCCGATTC 60.032 50.000 9.19 0.00 39.70 2.52
5358 17812 3.464907 CATCTCTGAACATGCCGATTCT 58.535 45.455 0.00 0.00 0.00 2.40
5359 17813 4.625028 CATCTCTGAACATGCCGATTCTA 58.375 43.478 0.00 0.00 0.00 2.10
5360 17814 4.944619 TCTCTGAACATGCCGATTCTAT 57.055 40.909 0.00 0.00 0.00 1.98
5361 17815 4.876125 TCTCTGAACATGCCGATTCTATC 58.124 43.478 0.00 0.00 0.00 2.08
5362 17816 3.993081 CTCTGAACATGCCGATTCTATCC 59.007 47.826 0.00 0.00 0.00 2.59
5363 17817 2.733552 CTGAACATGCCGATTCTATCCG 59.266 50.000 0.00 0.00 0.00 4.18
5364 17818 1.461127 GAACATGCCGATTCTATCCGC 59.539 52.381 0.00 0.00 34.71 5.54
5365 17819 0.681733 ACATGCCGATTCTATCCGCT 59.318 50.000 0.00 0.00 35.10 5.52
5366 17820 1.073964 CATGCCGATTCTATCCGCTG 58.926 55.000 0.00 0.00 35.10 5.18
5367 17821 0.036952 ATGCCGATTCTATCCGCTGG 60.037 55.000 0.00 0.00 35.10 4.85
5368 17822 1.112916 TGCCGATTCTATCCGCTGGA 61.113 55.000 0.00 0.00 35.10 3.86
5369 17823 0.667792 GCCGATTCTATCCGCTGGAC 60.668 60.000 0.00 0.00 32.98 4.02
5370 17824 0.387367 CCGATTCTATCCGCTGGACG 60.387 60.000 0.00 0.00 43.15 4.79
5371 17825 1.004277 CGATTCTATCCGCTGGACGC 61.004 60.000 0.00 0.00 41.76 5.19
5372 17826 0.315568 GATTCTATCCGCTGGACGCT 59.684 55.000 0.00 0.00 41.76 5.07
5373 17827 0.753262 ATTCTATCCGCTGGACGCTT 59.247 50.000 0.00 0.00 41.76 4.68
5374 17828 1.395635 TTCTATCCGCTGGACGCTTA 58.604 50.000 0.00 0.00 41.76 3.09
5375 17829 0.666913 TCTATCCGCTGGACGCTTAC 59.333 55.000 0.00 0.00 41.76 2.34
5376 17830 0.384309 CTATCCGCTGGACGCTTACA 59.616 55.000 0.00 0.00 41.76 2.41
5377 17831 1.000163 CTATCCGCTGGACGCTTACAT 60.000 52.381 0.00 0.00 41.76 2.29
5378 17832 0.249489 ATCCGCTGGACGCTTACATC 60.249 55.000 0.00 0.00 41.76 3.06
5379 17833 1.883084 CCGCTGGACGCTTACATCC 60.883 63.158 0.00 0.00 41.76 3.51
5380 17834 1.141881 CGCTGGACGCTTACATCCT 59.858 57.895 0.00 0.00 35.86 3.24
5381 17835 0.872021 CGCTGGACGCTTACATCCTC 60.872 60.000 0.00 0.00 35.86 3.71
5382 17836 0.461961 GCTGGACGCTTACATCCTCT 59.538 55.000 0.00 0.00 35.86 3.69
5383 17837 1.681793 GCTGGACGCTTACATCCTCTA 59.318 52.381 0.00 0.00 35.86 2.43
5384 17838 2.100916 GCTGGACGCTTACATCCTCTAA 59.899 50.000 0.00 0.00 35.86 2.10
5385 17839 3.707793 CTGGACGCTTACATCCTCTAAC 58.292 50.000 0.00 0.00 35.86 2.34
5386 17840 3.093814 TGGACGCTTACATCCTCTAACA 58.906 45.455 0.00 0.00 35.86 2.41
5387 17841 3.512329 TGGACGCTTACATCCTCTAACAA 59.488 43.478 0.00 0.00 35.86 2.83
5388 17842 4.161565 TGGACGCTTACATCCTCTAACAAT 59.838 41.667 0.00 0.00 35.86 2.71
5389 17843 5.116882 GGACGCTTACATCCTCTAACAATT 58.883 41.667 0.00 0.00 31.75 2.32
5390 17844 6.127281 TGGACGCTTACATCCTCTAACAATTA 60.127 38.462 0.00 0.00 35.86 1.40
5391 17845 6.200475 GGACGCTTACATCCTCTAACAATTAC 59.800 42.308 0.00 0.00 31.75 1.89
5392 17846 6.636705 ACGCTTACATCCTCTAACAATTACA 58.363 36.000 0.00 0.00 0.00 2.41
5393 17847 6.534079 ACGCTTACATCCTCTAACAATTACAC 59.466 38.462 0.00 0.00 0.00 2.90
5394 17848 6.018994 CGCTTACATCCTCTAACAATTACACC 60.019 42.308 0.00 0.00 0.00 4.16
5395 17849 6.018994 GCTTACATCCTCTAACAATTACACCG 60.019 42.308 0.00 0.00 0.00 4.94
5396 17850 4.189231 ACATCCTCTAACAATTACACCGC 58.811 43.478 0.00 0.00 0.00 5.68
5397 17851 2.883574 TCCTCTAACAATTACACCGCG 58.116 47.619 0.00 0.00 0.00 6.46
5398 17852 1.931172 CCTCTAACAATTACACCGCGG 59.069 52.381 26.86 26.86 0.00 6.46
5399 17853 1.326548 CTCTAACAATTACACCGCGGC 59.673 52.381 28.58 0.00 0.00 6.53
5400 17854 0.375803 CTAACAATTACACCGCGGCC 59.624 55.000 28.58 0.00 0.00 6.13
5401 17855 0.036199 TAACAATTACACCGCGGCCT 60.036 50.000 28.58 13.36 0.00 5.19
5402 17856 1.303091 AACAATTACACCGCGGCCTC 61.303 55.000 28.58 0.00 0.00 4.70
5403 17857 1.449601 CAATTACACCGCGGCCTCT 60.450 57.895 28.58 1.31 0.00 3.69
5404 17858 1.449601 AATTACACCGCGGCCTCTG 60.450 57.895 28.58 19.05 0.00 3.35
5405 17859 4.752879 TTACACCGCGGCCTCTGC 62.753 66.667 28.58 0.00 0.00 4.26
5416 17870 3.071580 GCCTCTGCCTATGACACAC 57.928 57.895 0.00 0.00 0.00 3.82
5417 17871 0.250234 GCCTCTGCCTATGACACACA 59.750 55.000 0.00 0.00 0.00 3.72
5418 17872 2.009042 GCCTCTGCCTATGACACACAC 61.009 57.143 0.00 0.00 0.00 3.82
5419 17873 1.552337 CCTCTGCCTATGACACACACT 59.448 52.381 0.00 0.00 0.00 3.55
5420 17874 2.027745 CCTCTGCCTATGACACACACTT 60.028 50.000 0.00 0.00 0.00 3.16
5421 17875 3.257393 CTCTGCCTATGACACACACTTC 58.743 50.000 0.00 0.00 0.00 3.01
5422 17876 2.632512 TCTGCCTATGACACACACTTCA 59.367 45.455 0.00 0.00 0.00 3.02
5423 17877 3.261643 TCTGCCTATGACACACACTTCAT 59.738 43.478 0.00 0.00 36.43 2.57
5424 17878 3.599343 TGCCTATGACACACACTTCATC 58.401 45.455 0.00 0.00 34.28 2.92
5425 17879 2.604914 GCCTATGACACACACTTCATCG 59.395 50.000 0.00 0.00 34.28 3.84
5426 17880 2.604914 CCTATGACACACACTTCATCGC 59.395 50.000 0.00 0.00 34.28 4.58
5427 17881 2.462456 ATGACACACACTTCATCGCT 57.538 45.000 0.00 0.00 0.00 4.93
5428 17882 1.783284 TGACACACACTTCATCGCTC 58.217 50.000 0.00 0.00 0.00 5.03
5429 17883 1.068434 TGACACACACTTCATCGCTCA 59.932 47.619 0.00 0.00 0.00 4.26
5430 17884 1.457303 GACACACACTTCATCGCTCAC 59.543 52.381 0.00 0.00 0.00 3.51
5431 17885 1.202521 ACACACACTTCATCGCTCACA 60.203 47.619 0.00 0.00 0.00 3.58
5432 17886 2.071540 CACACACTTCATCGCTCACAT 58.928 47.619 0.00 0.00 0.00 3.21
5433 17887 2.093310 CACACACTTCATCGCTCACATC 59.907 50.000 0.00 0.00 0.00 3.06
5434 17888 1.662629 CACACTTCATCGCTCACATCC 59.337 52.381 0.00 0.00 0.00 3.51
5435 17889 1.276138 ACACTTCATCGCTCACATCCA 59.724 47.619 0.00 0.00 0.00 3.41
5436 17890 1.662629 CACTTCATCGCTCACATCCAC 59.337 52.381 0.00 0.00 0.00 4.02
5437 17891 1.276138 ACTTCATCGCTCACATCCACA 59.724 47.619 0.00 0.00 0.00 4.17
5438 17892 2.289631 ACTTCATCGCTCACATCCACAA 60.290 45.455 0.00 0.00 0.00 3.33
5439 17893 1.725641 TCATCGCTCACATCCACAAC 58.274 50.000 0.00 0.00 0.00 3.32
5440 17894 0.729116 CATCGCTCACATCCACAACC 59.271 55.000 0.00 0.00 0.00 3.77
5441 17895 0.392998 ATCGCTCACATCCACAACCC 60.393 55.000 0.00 0.00 0.00 4.11
5442 17896 1.302431 CGCTCACATCCACAACCCA 60.302 57.895 0.00 0.00 0.00 4.51
5443 17897 0.888736 CGCTCACATCCACAACCCAA 60.889 55.000 0.00 0.00 0.00 4.12
5444 17898 0.883833 GCTCACATCCACAACCCAAG 59.116 55.000 0.00 0.00 0.00 3.61
5445 17899 1.819305 GCTCACATCCACAACCCAAGT 60.819 52.381 0.00 0.00 0.00 3.16
5446 17900 2.586425 CTCACATCCACAACCCAAGTT 58.414 47.619 0.00 0.00 36.33 2.66
5447 17901 2.958355 CTCACATCCACAACCCAAGTTT 59.042 45.455 0.00 0.00 32.45 2.66
5448 17902 2.692557 TCACATCCACAACCCAAGTTTG 59.307 45.455 0.00 0.00 32.45 2.93
5449 17903 1.412343 ACATCCACAACCCAAGTTTGC 59.588 47.619 0.00 0.00 32.45 3.68
5450 17904 1.411977 CATCCACAACCCAAGTTTGCA 59.588 47.619 0.00 0.00 32.45 4.08
5451 17905 0.820871 TCCACAACCCAAGTTTGCAC 59.179 50.000 0.00 0.00 32.45 4.57
5452 17906 0.534412 CCACAACCCAAGTTTGCACA 59.466 50.000 0.00 0.00 32.45 4.57
5453 17907 1.066573 CCACAACCCAAGTTTGCACAA 60.067 47.619 0.00 0.00 32.45 3.33
5454 17908 2.613977 CCACAACCCAAGTTTGCACAAA 60.614 45.455 0.00 0.00 32.45 2.83
5455 17909 2.672381 CACAACCCAAGTTTGCACAAAG 59.328 45.455 0.00 0.00 32.45 2.77
5456 17910 2.301583 ACAACCCAAGTTTGCACAAAGT 59.698 40.909 0.00 0.00 35.61 2.66
5457 17911 2.929398 CAACCCAAGTTTGCACAAAGTC 59.071 45.455 4.03 0.00 33.15 3.01
5458 17912 2.456577 ACCCAAGTTTGCACAAAGTCT 58.543 42.857 4.03 0.00 33.15 3.24
5459 17913 2.166254 ACCCAAGTTTGCACAAAGTCTG 59.834 45.455 4.03 5.44 33.15 3.51
5460 17914 2.481795 CCCAAGTTTGCACAAAGTCTGG 60.482 50.000 16.79 16.79 33.15 3.86
5461 17915 2.426738 CCAAGTTTGCACAAAGTCTGGA 59.573 45.455 17.87 0.00 35.87 3.86
5462 17916 3.119173 CCAAGTTTGCACAAAGTCTGGAA 60.119 43.478 17.87 0.00 35.87 3.53
5463 17917 4.107622 CAAGTTTGCACAAAGTCTGGAAG 58.892 43.478 4.03 0.00 33.15 3.46
5464 17918 2.099756 AGTTTGCACAAAGTCTGGAAGC 59.900 45.455 0.00 0.00 28.36 3.86
5465 17919 2.057137 TTGCACAAAGTCTGGAAGCT 57.943 45.000 0.00 0.00 0.00 3.74
5466 17920 2.057137 TGCACAAAGTCTGGAAGCTT 57.943 45.000 0.00 0.00 32.93 3.74
5467 17921 3.207265 TGCACAAAGTCTGGAAGCTTA 57.793 42.857 0.00 0.00 31.67 3.09
5468 17922 3.550820 TGCACAAAGTCTGGAAGCTTAA 58.449 40.909 0.00 0.00 31.67 1.85
5469 17923 3.951037 TGCACAAAGTCTGGAAGCTTAAA 59.049 39.130 0.00 0.00 31.67 1.52
5470 17924 4.400884 TGCACAAAGTCTGGAAGCTTAAAA 59.599 37.500 0.00 0.00 31.67 1.52
5471 17925 4.740205 GCACAAAGTCTGGAAGCTTAAAAC 59.260 41.667 0.00 0.00 31.67 2.43
5472 17926 4.970003 CACAAAGTCTGGAAGCTTAAAACG 59.030 41.667 0.00 0.00 31.67 3.60
5473 17927 4.036380 ACAAAGTCTGGAAGCTTAAAACGG 59.964 41.667 0.00 0.00 31.67 4.44
5474 17928 3.764237 AGTCTGGAAGCTTAAAACGGA 57.236 42.857 0.00 0.00 0.00 4.69
5475 17929 4.287766 AGTCTGGAAGCTTAAAACGGAT 57.712 40.909 0.00 0.00 0.00 4.18
5476 17930 4.003648 AGTCTGGAAGCTTAAAACGGATG 58.996 43.478 0.00 0.00 0.00 3.51
5477 17931 3.127030 GTCTGGAAGCTTAAAACGGATGG 59.873 47.826 0.00 0.00 0.00 3.51
5478 17932 3.008594 TCTGGAAGCTTAAAACGGATGGA 59.991 43.478 0.00 0.00 0.00 3.41
5479 17933 3.756434 CTGGAAGCTTAAAACGGATGGAA 59.244 43.478 0.00 0.00 0.00 3.53
5480 17934 4.145807 TGGAAGCTTAAAACGGATGGAAA 58.854 39.130 0.00 0.00 0.00 3.13
5481 17935 4.217550 TGGAAGCTTAAAACGGATGGAAAG 59.782 41.667 0.00 0.00 0.00 2.62
5482 17936 4.380550 GGAAGCTTAAAACGGATGGAAAGG 60.381 45.833 0.00 0.00 0.00 3.11
5483 17937 3.763057 AGCTTAAAACGGATGGAAAGGT 58.237 40.909 0.00 0.00 0.00 3.50
5484 17938 4.149598 AGCTTAAAACGGATGGAAAGGTT 58.850 39.130 0.00 0.00 0.00 3.50
5485 17939 4.217767 AGCTTAAAACGGATGGAAAGGTTC 59.782 41.667 0.00 0.00 0.00 3.62
5486 17940 4.022676 GCTTAAAACGGATGGAAAGGTTCA 60.023 41.667 0.00 0.00 0.00 3.18
5487 17941 5.508320 GCTTAAAACGGATGGAAAGGTTCAA 60.508 40.000 0.00 0.00 0.00 2.69
5488 17942 6.658188 TTAAAACGGATGGAAAGGTTCAAT 57.342 33.333 0.00 0.00 0.00 2.57
5489 17943 5.545063 AAAACGGATGGAAAGGTTCAATT 57.455 34.783 0.00 0.00 0.00 2.32
5490 17944 4.783764 AACGGATGGAAAGGTTCAATTC 57.216 40.909 0.00 0.00 0.00 2.17
5491 17945 4.034285 ACGGATGGAAAGGTTCAATTCT 57.966 40.909 0.00 0.00 0.00 2.40
5492 17946 4.407365 ACGGATGGAAAGGTTCAATTCTT 58.593 39.130 0.00 0.00 0.00 2.52
5493 17947 4.459337 ACGGATGGAAAGGTTCAATTCTTC 59.541 41.667 0.00 0.00 0.00 2.87
5494 17948 4.458989 CGGATGGAAAGGTTCAATTCTTCA 59.541 41.667 0.00 0.00 0.00 3.02
5495 17949 5.126061 CGGATGGAAAGGTTCAATTCTTCAT 59.874 40.000 0.00 0.00 0.00 2.57
5496 17950 6.335777 GGATGGAAAGGTTCAATTCTTCATG 58.664 40.000 0.00 0.00 0.00 3.07
5497 17951 6.071165 GGATGGAAAGGTTCAATTCTTCATGT 60.071 38.462 0.00 0.00 0.00 3.21
5498 17952 6.088016 TGGAAAGGTTCAATTCTTCATGTG 57.912 37.500 0.00 0.00 0.00 3.21
5499 17953 5.010922 TGGAAAGGTTCAATTCTTCATGTGG 59.989 40.000 0.00 0.00 0.00 4.17
5500 17954 5.011023 GGAAAGGTTCAATTCTTCATGTGGT 59.989 40.000 0.00 0.00 0.00 4.16
5501 17955 6.462909 GGAAAGGTTCAATTCTTCATGTGGTT 60.463 38.462 0.00 0.00 0.00 3.67
5502 17956 5.458041 AGGTTCAATTCTTCATGTGGTTG 57.542 39.130 0.00 0.00 0.00 3.77
5503 17957 3.989817 GGTTCAATTCTTCATGTGGTTGC 59.010 43.478 0.00 0.00 0.00 4.17
5504 17958 4.262164 GGTTCAATTCTTCATGTGGTTGCT 60.262 41.667 0.00 0.00 0.00 3.91
5505 17959 4.771590 TCAATTCTTCATGTGGTTGCTC 57.228 40.909 0.00 0.00 0.00 4.26
5506 17960 3.189080 TCAATTCTTCATGTGGTTGCTCG 59.811 43.478 0.00 0.00 0.00 5.03
5507 17961 2.254546 TTCTTCATGTGGTTGCTCGT 57.745 45.000 0.00 0.00 0.00 4.18
5508 17962 1.795768 TCTTCATGTGGTTGCTCGTC 58.204 50.000 0.00 0.00 0.00 4.20
5509 17963 0.798776 CTTCATGTGGTTGCTCGTCC 59.201 55.000 0.00 0.00 0.00 4.79
5510 17964 0.107643 TTCATGTGGTTGCTCGTCCA 59.892 50.000 0.00 0.00 0.00 4.02
5511 17965 0.107643 TCATGTGGTTGCTCGTCCAA 59.892 50.000 0.00 0.00 35.38 3.53
5512 17966 0.950836 CATGTGGTTGCTCGTCCAAA 59.049 50.000 0.00 0.00 35.38 3.28
5513 17967 1.336440 CATGTGGTTGCTCGTCCAAAA 59.664 47.619 0.00 0.00 35.38 2.44
5514 17968 1.686355 TGTGGTTGCTCGTCCAAAAT 58.314 45.000 0.00 0.00 35.38 1.82
5515 17969 1.606668 TGTGGTTGCTCGTCCAAAATC 59.393 47.619 0.00 0.00 35.38 2.17
5516 17970 0.871722 TGGTTGCTCGTCCAAAATCG 59.128 50.000 0.00 0.00 0.00 3.34
5517 17971 0.168128 GGTTGCTCGTCCAAAATCGG 59.832 55.000 0.00 0.00 0.00 4.18
5518 17972 0.454452 GTTGCTCGTCCAAAATCGGC 60.454 55.000 0.00 0.00 0.00 5.54
5519 17973 0.605319 TTGCTCGTCCAAAATCGGCT 60.605 50.000 0.00 0.00 0.00 5.52
5520 17974 1.298157 TGCTCGTCCAAAATCGGCTG 61.298 55.000 0.00 0.00 0.00 4.85
5521 17975 1.298859 GCTCGTCCAAAATCGGCTGT 61.299 55.000 0.00 0.00 0.00 4.40
5522 17976 0.443869 CTCGTCCAAAATCGGCTGTG 59.556 55.000 0.00 0.00 0.00 3.66
5523 17977 0.953471 TCGTCCAAAATCGGCTGTGG 60.953 55.000 0.00 0.00 0.00 4.17
5524 17978 0.953471 CGTCCAAAATCGGCTGTGGA 60.953 55.000 0.00 0.00 37.83 4.02
5525 17979 2.941210 TCCAAAATCGGCTGTGGAC 58.059 52.632 0.00 0.00 35.22 4.02
5526 17980 0.608035 TCCAAAATCGGCTGTGGACC 60.608 55.000 0.00 0.00 35.22 4.46
5535 17989 3.680786 CTGTGGACCGCGGACAGA 61.681 66.667 31.33 25.22 39.64 3.41
5536 17990 3.916392 CTGTGGACCGCGGACAGAC 62.916 68.421 31.33 24.43 39.64 3.51
5537 17991 3.681835 GTGGACCGCGGACAGACT 61.682 66.667 35.90 8.10 0.00 3.24
5538 17992 3.371063 TGGACCGCGGACAGACTC 61.371 66.667 35.90 17.99 0.00 3.36
5539 17993 3.063084 GGACCGCGGACAGACTCT 61.063 66.667 35.90 6.14 0.00 3.24
5540 17994 2.179517 GACCGCGGACAGACTCTG 59.820 66.667 35.90 4.36 37.52 3.35
5542 17996 2.143594 GACCGCGGACAGACTCTGTT 62.144 60.000 35.90 3.54 45.44 3.16
5543 17997 1.444553 CCGCGGACAGACTCTGTTC 60.445 63.158 24.07 10.16 45.44 3.18
5546 18000 4.154613 GGACAGACTCTGTTCGCG 57.845 61.111 13.06 0.00 45.44 5.87
5547 18001 1.286260 GGACAGACTCTGTTCGCGT 59.714 57.895 13.06 0.00 45.44 6.01
5548 18002 1.004277 GGACAGACTCTGTTCGCGTG 61.004 60.000 13.06 0.00 45.44 5.34
5549 18003 1.004277 GACAGACTCTGTTCGCGTGG 61.004 60.000 13.06 0.00 45.44 4.94
5550 18004 1.285950 CAGACTCTGTTCGCGTGGA 59.714 57.895 5.77 0.00 0.00 4.02
5551 18005 0.109086 CAGACTCTGTTCGCGTGGAT 60.109 55.000 5.77 0.00 0.00 3.41
5552 18006 0.109086 AGACTCTGTTCGCGTGGATG 60.109 55.000 5.77 0.00 0.00 3.51
5553 18007 1.078759 GACTCTGTTCGCGTGGATGG 61.079 60.000 5.77 0.00 0.00 3.51
5554 18008 2.434185 TCTGTTCGCGTGGATGGC 60.434 61.111 5.77 0.00 0.00 4.40
5555 18009 3.499737 CTGTTCGCGTGGATGGCC 61.500 66.667 5.77 0.00 0.00 5.36
5562 18016 3.133464 CGTGGATGGCCGCACAAT 61.133 61.111 0.00 0.00 45.17 2.71
5563 18017 2.491152 GTGGATGGCCGCACAATG 59.509 61.111 0.00 0.00 44.29 2.82
5564 18018 3.451004 TGGATGGCCGCACAATGC 61.451 61.111 0.00 0.00 40.69 3.56
5565 18019 3.451004 GGATGGCCGCACAATGCA 61.451 61.111 0.00 0.00 45.36 3.96
5566 18020 2.572812 GATGGCCGCACAATGCAA 59.427 55.556 0.00 0.00 45.36 4.08
5567 18021 1.806758 GATGGCCGCACAATGCAAC 60.807 57.895 0.00 0.00 45.36 4.17
5568 18022 2.216750 GATGGCCGCACAATGCAACT 62.217 55.000 0.00 0.00 45.36 3.16
5569 18023 1.818959 ATGGCCGCACAATGCAACTT 61.819 50.000 0.00 0.00 45.36 2.66
5570 18024 2.023223 GGCCGCACAATGCAACTTG 61.023 57.895 0.00 0.00 45.36 3.16
5571 18025 1.300080 GCCGCACAATGCAACTTGT 60.300 52.632 0.00 0.00 45.36 3.16
5584 18038 3.532892 CAACTTGTGCACTCTGTGATC 57.467 47.619 19.41 0.00 35.23 2.92
5585 18039 2.874086 CAACTTGTGCACTCTGTGATCA 59.126 45.455 19.41 0.00 35.23 2.92
5586 18040 3.198409 ACTTGTGCACTCTGTGATCAA 57.802 42.857 19.41 0.00 35.23 2.57
5587 18041 3.748083 ACTTGTGCACTCTGTGATCAAT 58.252 40.909 19.41 0.00 35.23 2.57
5588 18042 3.750130 ACTTGTGCACTCTGTGATCAATC 59.250 43.478 19.41 0.00 35.23 2.67
5589 18043 2.703416 TGTGCACTCTGTGATCAATCC 58.297 47.619 19.41 0.00 35.23 3.01
5590 18044 2.038820 TGTGCACTCTGTGATCAATCCA 59.961 45.455 19.41 0.00 35.23 3.41
5591 18045 3.276857 GTGCACTCTGTGATCAATCCAT 58.723 45.455 10.32 0.00 35.23 3.41
5592 18046 3.064958 GTGCACTCTGTGATCAATCCATG 59.935 47.826 10.32 0.00 35.23 3.66
5593 18047 2.617308 GCACTCTGTGATCAATCCATGG 59.383 50.000 4.97 4.97 35.23 3.66
5594 18048 3.683564 GCACTCTGTGATCAATCCATGGA 60.684 47.826 18.88 18.88 35.23 3.41
5595 18049 4.520179 CACTCTGTGATCAATCCATGGAA 58.480 43.478 20.67 2.02 35.23 3.53
5596 18050 4.945543 CACTCTGTGATCAATCCATGGAAA 59.054 41.667 20.67 7.96 35.23 3.13
5597 18051 4.946157 ACTCTGTGATCAATCCATGGAAAC 59.054 41.667 20.67 10.74 0.00 2.78
5598 18052 7.520706 CACTCTGTGATCAATCCATGGAAACA 61.521 42.308 20.67 14.44 39.70 2.83
5599 18053 8.762834 CACTCTGTGATCAATCCATGGAAACAT 61.763 40.741 20.67 10.42 44.09 2.71
5613 18067 5.694231 TGGAAACATTGACACATCTTCTG 57.306 39.130 0.00 0.00 33.40 3.02
5614 18068 4.022935 TGGAAACATTGACACATCTTCTGC 60.023 41.667 0.00 0.00 33.40 4.26
5615 18069 4.217118 GGAAACATTGACACATCTTCTGCT 59.783 41.667 0.00 0.00 0.00 4.24
5616 18070 5.368256 AAACATTGACACATCTTCTGCTC 57.632 39.130 0.00 0.00 0.00 4.26
5617 18071 2.998670 ACATTGACACATCTTCTGCTCG 59.001 45.455 0.00 0.00 0.00 5.03
5618 18072 3.256558 CATTGACACATCTTCTGCTCGA 58.743 45.455 0.00 0.00 0.00 4.04
5619 18073 2.643933 TGACACATCTTCTGCTCGAG 57.356 50.000 8.45 8.45 0.00 4.04
5620 18074 1.889170 TGACACATCTTCTGCTCGAGT 59.111 47.619 15.13 0.00 0.00 4.18
5621 18075 2.257894 GACACATCTTCTGCTCGAGTG 58.742 52.381 15.13 7.74 0.00 3.51
5622 18076 0.997932 CACATCTTCTGCTCGAGTGC 59.002 55.000 15.13 1.33 0.00 4.40
5623 18077 0.108424 ACATCTTCTGCTCGAGTGCC 60.108 55.000 15.13 0.00 0.00 5.01
5624 18078 0.809241 CATCTTCTGCTCGAGTGCCC 60.809 60.000 15.13 0.00 0.00 5.36
5625 18079 1.260538 ATCTTCTGCTCGAGTGCCCA 61.261 55.000 15.13 2.11 0.00 5.36
5626 18080 1.220206 CTTCTGCTCGAGTGCCCAT 59.780 57.895 15.13 0.00 0.00 4.00
5627 18081 0.392193 CTTCTGCTCGAGTGCCCATT 60.392 55.000 15.13 0.00 0.00 3.16
5628 18082 0.391661 TTCTGCTCGAGTGCCCATTC 60.392 55.000 15.13 0.00 0.00 2.67
5629 18083 1.078918 CTGCTCGAGTGCCCATTCA 60.079 57.895 15.13 0.00 0.00 2.57
5630 18084 1.078918 TGCTCGAGTGCCCATTCAG 60.079 57.895 15.13 0.00 0.00 3.02
5631 18085 2.467826 GCTCGAGTGCCCATTCAGC 61.468 63.158 15.13 0.00 0.00 4.26
5632 18086 1.078918 CTCGAGTGCCCATTCAGCA 60.079 57.895 3.62 0.00 38.08 4.41
5633 18087 0.674581 CTCGAGTGCCCATTCAGCAA 60.675 55.000 3.62 0.00 43.02 3.91
5634 18088 0.674581 TCGAGTGCCCATTCAGCAAG 60.675 55.000 0.00 0.00 43.02 4.01
5635 18089 1.509923 GAGTGCCCATTCAGCAAGC 59.490 57.895 0.00 0.00 43.02 4.01
5636 18090 1.228644 AGTGCCCATTCAGCAAGCA 60.229 52.632 0.00 0.00 43.02 3.91
5637 18091 0.828762 AGTGCCCATTCAGCAAGCAA 60.829 50.000 0.00 0.00 43.02 3.91
5638 18092 0.389426 GTGCCCATTCAGCAAGCAAG 60.389 55.000 0.00 0.00 43.02 4.01
5639 18093 0.828762 TGCCCATTCAGCAAGCAAGT 60.829 50.000 0.00 0.00 37.28 3.16
5640 18094 1.176527 GCCCATTCAGCAAGCAAGTA 58.823 50.000 0.00 0.00 0.00 2.24
5641 18095 1.753073 GCCCATTCAGCAAGCAAGTAT 59.247 47.619 0.00 0.00 0.00 2.12
5642 18096 2.480759 GCCCATTCAGCAAGCAAGTATG 60.481 50.000 0.00 0.00 0.00 2.39
5643 18097 2.100252 CCCATTCAGCAAGCAAGTATGG 59.900 50.000 12.74 12.74 0.00 2.74
5644 18098 2.756760 CCATTCAGCAAGCAAGTATGGT 59.243 45.455 11.97 0.00 39.43 3.55
5646 18100 4.418392 CATTCAGCAAGCAAGTATGGTTC 58.582 43.478 0.00 0.00 45.07 3.62
5647 18101 2.076100 TCAGCAAGCAAGTATGGTTCG 58.924 47.619 0.00 0.00 45.07 3.95
5648 18102 0.804989 AGCAAGCAAGTATGGTTCGC 59.195 50.000 0.00 0.00 45.07 4.70
5649 18103 0.179163 GCAAGCAAGTATGGTTCGCC 60.179 55.000 0.00 0.00 45.07 5.54
5650 18104 1.453155 CAAGCAAGTATGGTTCGCCT 58.547 50.000 0.00 0.00 45.07 5.52
5651 18105 1.812571 CAAGCAAGTATGGTTCGCCTT 59.187 47.619 0.00 0.00 45.07 4.35
5652 18106 1.739067 AGCAAGTATGGTTCGCCTTC 58.261 50.000 0.00 0.00 38.36 3.46
5653 18107 1.003118 AGCAAGTATGGTTCGCCTTCA 59.997 47.619 0.00 0.00 38.36 3.02
5654 18108 1.398390 GCAAGTATGGTTCGCCTTCAG 59.602 52.381 0.00 0.00 38.36 3.02
5655 18109 1.398390 CAAGTATGGTTCGCCTTCAGC 59.602 52.381 0.00 0.00 38.36 4.26
5656 18110 0.905357 AGTATGGTTCGCCTTCAGCT 59.095 50.000 0.00 0.00 40.39 4.24
5657 18111 1.134670 AGTATGGTTCGCCTTCAGCTC 60.135 52.381 0.00 0.00 40.39 4.09
5658 18112 1.134670 GTATGGTTCGCCTTCAGCTCT 60.135 52.381 0.00 0.00 40.39 4.09
5659 18113 0.326264 ATGGTTCGCCTTCAGCTCTT 59.674 50.000 0.00 0.00 40.39 2.85
5660 18114 0.320771 TGGTTCGCCTTCAGCTCTTC 60.321 55.000 0.00 0.00 40.39 2.87
5661 18115 1.021920 GGTTCGCCTTCAGCTCTTCC 61.022 60.000 0.00 0.00 40.39 3.46
5662 18116 1.021920 GTTCGCCTTCAGCTCTTCCC 61.022 60.000 0.00 0.00 40.39 3.97
5663 18117 1.480212 TTCGCCTTCAGCTCTTCCCA 61.480 55.000 0.00 0.00 40.39 4.37
5664 18118 1.743252 CGCCTTCAGCTCTTCCCAC 60.743 63.158 0.00 0.00 40.39 4.61
5665 18119 1.377856 GCCTTCAGCTCTTCCCACC 60.378 63.158 0.00 0.00 38.99 4.61
5666 18120 1.301293 CCTTCAGCTCTTCCCACCC 59.699 63.158 0.00 0.00 0.00 4.61
5667 18121 1.492133 CCTTCAGCTCTTCCCACCCA 61.492 60.000 0.00 0.00 0.00 4.51
5668 18122 0.035630 CTTCAGCTCTTCCCACCCAG 60.036 60.000 0.00 0.00 0.00 4.45
5669 18123 1.492133 TTCAGCTCTTCCCACCCAGG 61.492 60.000 0.00 0.00 37.03 4.45
5698 18152 2.661537 CTGCTCGCACGACCACAA 60.662 61.111 0.00 0.00 0.00 3.33
5699 18153 2.943345 CTGCTCGCACGACCACAAC 61.943 63.158 0.00 0.00 0.00 3.32
5700 18154 2.661866 GCTCGCACGACCACAACT 60.662 61.111 0.00 0.00 0.00 3.16
5701 18155 2.943345 GCTCGCACGACCACAACTG 61.943 63.158 0.00 0.00 0.00 3.16
5702 18156 2.943345 CTCGCACGACCACAACTGC 61.943 63.158 0.00 0.00 0.00 4.40
5703 18157 4.012895 CGCACGACCACAACTGCC 62.013 66.667 0.00 0.00 0.00 4.85
5704 18158 3.660111 GCACGACCACAACTGCCC 61.660 66.667 0.00 0.00 0.00 5.36
5705 18159 2.111043 CACGACCACAACTGCCCT 59.889 61.111 0.00 0.00 0.00 5.19
5706 18160 1.525995 CACGACCACAACTGCCCTT 60.526 57.895 0.00 0.00 0.00 3.95
5707 18161 1.525995 ACGACCACAACTGCCCTTG 60.526 57.895 0.00 0.00 0.00 3.61
5708 18162 2.260869 CGACCACAACTGCCCTTGG 61.261 63.158 0.00 0.00 35.06 3.61
5709 18163 1.150536 GACCACAACTGCCCTTGGA 59.849 57.895 0.00 0.00 33.02 3.53
5710 18164 0.251341 GACCACAACTGCCCTTGGAT 60.251 55.000 0.00 0.00 33.02 3.41
5711 18165 0.540365 ACCACAACTGCCCTTGGATG 60.540 55.000 0.00 0.00 33.02 3.51
5712 18166 1.252904 CCACAACTGCCCTTGGATGG 61.253 60.000 0.00 0.00 0.00 3.51
5713 18167 0.540365 CACAACTGCCCTTGGATGGT 60.540 55.000 0.00 0.00 0.00 3.55
5714 18168 1.072266 ACAACTGCCCTTGGATGGTA 58.928 50.000 0.00 0.00 0.00 3.25
5715 18169 1.004745 ACAACTGCCCTTGGATGGTAG 59.995 52.381 0.00 0.00 40.96 3.18
5716 18170 1.281867 CAACTGCCCTTGGATGGTAGA 59.718 52.381 1.31 0.00 37.77 2.59
5717 18171 1.668826 ACTGCCCTTGGATGGTAGAA 58.331 50.000 1.31 0.00 37.77 2.10
5718 18172 1.561542 ACTGCCCTTGGATGGTAGAAG 59.438 52.381 1.31 0.00 37.77 2.85
5719 18173 1.839994 CTGCCCTTGGATGGTAGAAGA 59.160 52.381 0.00 0.00 37.77 2.87
5720 18174 2.239654 CTGCCCTTGGATGGTAGAAGAA 59.760 50.000 0.00 0.00 37.77 2.52
5721 18175 2.239654 TGCCCTTGGATGGTAGAAGAAG 59.760 50.000 0.00 0.00 0.00 2.85
5722 18176 2.505819 GCCCTTGGATGGTAGAAGAAGA 59.494 50.000 0.00 0.00 0.00 2.87
5723 18177 3.682999 GCCCTTGGATGGTAGAAGAAGAC 60.683 52.174 0.00 0.00 0.00 3.01
5724 18178 3.118223 CCCTTGGATGGTAGAAGAAGACC 60.118 52.174 0.00 0.00 36.17 3.85
5725 18179 3.777522 CCTTGGATGGTAGAAGAAGACCT 59.222 47.826 0.00 0.00 36.62 3.85
5726 18180 4.141824 CCTTGGATGGTAGAAGAAGACCTC 60.142 50.000 0.00 0.00 36.62 3.85
5727 18181 4.061131 TGGATGGTAGAAGAAGACCTCA 57.939 45.455 0.00 0.00 36.62 3.86
5728 18182 4.624913 TGGATGGTAGAAGAAGACCTCAT 58.375 43.478 0.00 0.00 36.62 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.731275 TCGTACATATCACTCAAAAATTGGAT 57.269 30.769 0.00 0.00 0.00 3.41
2 3 7.065803 ACCTCGTACATATCACTCAAAAATTGG 59.934 37.037 0.00 0.00 0.00 3.16
3 4 7.974675 ACCTCGTACATATCACTCAAAAATTG 58.025 34.615 0.00 0.00 0.00 2.32
7 8 5.872617 CCAACCTCGTACATATCACTCAAAA 59.127 40.000 0.00 0.00 0.00 2.44
8 9 5.416083 CCAACCTCGTACATATCACTCAAA 58.584 41.667 0.00 0.00 0.00 2.69
9 10 4.679639 GCCAACCTCGTACATATCACTCAA 60.680 45.833 0.00 0.00 0.00 3.02
10 11 3.181479 GCCAACCTCGTACATATCACTCA 60.181 47.826 0.00 0.00 0.00 3.41
11 12 3.181479 TGCCAACCTCGTACATATCACTC 60.181 47.826 0.00 0.00 0.00 3.51
12 13 2.764010 TGCCAACCTCGTACATATCACT 59.236 45.455 0.00 0.00 0.00 3.41
13 14 3.123804 CTGCCAACCTCGTACATATCAC 58.876 50.000 0.00 0.00 0.00 3.06
14 15 3.028130 TCTGCCAACCTCGTACATATCA 58.972 45.455 0.00 0.00 0.00 2.15
15 16 3.728076 TCTGCCAACCTCGTACATATC 57.272 47.619 0.00 0.00 0.00 1.63
16 17 5.047943 GTCTATCTGCCAACCTCGTACATAT 60.048 44.000 0.00 0.00 0.00 1.78
17 18 4.277672 GTCTATCTGCCAACCTCGTACATA 59.722 45.833 0.00 0.00 0.00 2.29
18 19 3.068307 GTCTATCTGCCAACCTCGTACAT 59.932 47.826 0.00 0.00 0.00 2.29
19 20 2.426024 GTCTATCTGCCAACCTCGTACA 59.574 50.000 0.00 0.00 0.00 2.90
20 21 2.688958 AGTCTATCTGCCAACCTCGTAC 59.311 50.000 0.00 0.00 0.00 3.67
21 22 2.950309 GAGTCTATCTGCCAACCTCGTA 59.050 50.000 0.00 0.00 0.00 3.43
22 23 1.751924 GAGTCTATCTGCCAACCTCGT 59.248 52.381 0.00 0.00 0.00 4.18
23 24 1.067821 GGAGTCTATCTGCCAACCTCG 59.932 57.143 0.00 0.00 0.00 4.63
24 25 1.067821 CGGAGTCTATCTGCCAACCTC 59.932 57.143 0.00 0.00 0.00 3.85
25 26 1.115467 CGGAGTCTATCTGCCAACCT 58.885 55.000 0.00 0.00 0.00 3.50
26 27 0.824759 ACGGAGTCTATCTGCCAACC 59.175 55.000 0.00 0.00 29.74 3.77
27 28 2.166664 AGAACGGAGTCTATCTGCCAAC 59.833 50.000 0.00 0.00 45.00 3.77
28 29 2.457598 AGAACGGAGTCTATCTGCCAA 58.542 47.619 0.00 0.00 45.00 4.52
29 30 2.145397 AGAACGGAGTCTATCTGCCA 57.855 50.000 0.00 0.00 45.00 4.92
30 31 3.119101 TGAAAGAACGGAGTCTATCTGCC 60.119 47.826 0.00 0.00 45.00 4.85
31 32 4.111375 TGAAAGAACGGAGTCTATCTGC 57.889 45.455 0.00 0.00 45.00 4.26
32 33 5.715070 ACTTGAAAGAACGGAGTCTATCTG 58.285 41.667 0.00 0.00 45.00 2.90
33 34 5.986501 ACTTGAAAGAACGGAGTCTATCT 57.013 39.130 0.00 0.00 45.00 1.98
34 35 6.618811 TGTACTTGAAAGAACGGAGTCTATC 58.381 40.000 0.00 0.00 45.00 2.08
35 36 6.208994 ACTGTACTTGAAAGAACGGAGTCTAT 59.791 38.462 0.00 0.00 45.00 1.98
36 37 5.533903 ACTGTACTTGAAAGAACGGAGTCTA 59.466 40.000 0.00 0.00 45.00 2.59
37 38 4.341520 ACTGTACTTGAAAGAACGGAGTCT 59.658 41.667 0.00 0.00 45.00 3.24
38 39 4.618965 ACTGTACTTGAAAGAACGGAGTC 58.381 43.478 0.00 0.00 45.00 3.36
40 41 5.047847 TGAACTGTACTTGAAAGAACGGAG 58.952 41.667 0.00 0.00 0.00 4.63
41 42 5.013568 TGAACTGTACTTGAAAGAACGGA 57.986 39.130 0.00 0.00 0.00 4.69
42 43 5.728351 TTGAACTGTACTTGAAAGAACGG 57.272 39.130 0.00 0.00 0.00 4.44
43 44 9.710979 TTATTTTGAACTGTACTTGAAAGAACG 57.289 29.630 0.00 0.00 0.00 3.95
96 97 4.571984 CAGCATGTGATCAATACGGAGAAA 59.428 41.667 0.00 0.00 0.00 2.52
118 119 2.920724 TCAAACCATGGACGAGAACA 57.079 45.000 21.47 0.00 0.00 3.18
152 154 9.573133 AACAGTGTCTTTTGAAACAAGATTTAG 57.427 29.630 0.00 0.00 39.13 1.85
157 159 6.015856 TCCAAACAGTGTCTTTTGAAACAAGA 60.016 34.615 7.59 0.00 39.13 3.02
224 286 7.331687 GTCCACATACGGTACTTAAAAGCTTAA 59.668 37.037 0.00 0.00 0.00 1.85
231 293 4.221262 AGCTGTCCACATACGGTACTTAAA 59.779 41.667 0.00 0.00 0.00 1.52
255 317 5.303971 AGAGAGTCTTGGAGTTGACATTTG 58.696 41.667 0.00 0.00 35.81 2.32
282 344 4.222114 CAAAGCTTGAATTCTGGTTCGAC 58.778 43.478 0.00 0.00 0.00 4.20
356 419 7.167302 CGTTAATTTCTTGACAAATTGCTGACA 59.833 33.333 0.00 0.00 36.75 3.58
399 462 5.632244 TGTTGACATGTGAATCCATCTTG 57.368 39.130 1.15 0.00 0.00 3.02
442 509 6.551385 AGATCAACTGTCAATCTGTTTGTC 57.449 37.500 0.00 0.00 36.35 3.18
504 579 7.041098 CGCCTAATTGTATAGCAATCTCCTTTT 60.041 37.037 0.00 0.00 46.29 2.27
508 583 4.093556 GCGCCTAATTGTATAGCAATCTCC 59.906 45.833 0.00 0.00 46.29 3.71
562 637 7.903431 ACAAAGTGATCTTCGCGATATTTTTAC 59.097 33.333 10.88 4.00 32.90 2.01
682 757 6.426646 ACTTGTCAGACTTAGGACTGAAAT 57.573 37.500 8.48 0.00 43.34 2.17
691 766 6.183360 CGTCATTGCTTACTTGTCAGACTTAG 60.183 42.308 1.31 2.14 0.00 2.18
693 768 4.449068 CGTCATTGCTTACTTGTCAGACTT 59.551 41.667 1.31 0.00 0.00 3.01
737 812 4.063689 AGACTTCACAAATCAGCTGTCAG 58.936 43.478 14.67 5.20 0.00 3.51
738 813 4.060900 GAGACTTCACAAATCAGCTGTCA 58.939 43.478 14.67 0.00 0.00 3.58
882 987 3.589735 TGGGAGCAATTAAGTACTTCCCA 59.410 43.478 20.64 20.64 41.99 4.37
930 1035 8.892530 TCAGGCCTAGATCTTAGTACTAGTTAT 58.107 37.037 3.98 0.00 33.85 1.89
976 1083 1.257743 GTGGTACAGCTGGTGAGAGA 58.742 55.000 19.93 0.00 41.80 3.10
990 1103 2.693591 GAGAAGGATCATGACCGTGGTA 59.306 50.000 0.00 0.00 0.00 3.25
1004 1117 0.972983 CGGCAGGAAGAGGAGAAGGA 60.973 60.000 0.00 0.00 0.00 3.36
1005 1118 1.261238 ACGGCAGGAAGAGGAGAAGG 61.261 60.000 0.00 0.00 0.00 3.46
1006 1119 0.610687 AACGGCAGGAAGAGGAGAAG 59.389 55.000 0.00 0.00 0.00 2.85
1507 1629 0.982704 CTGGGGCCTCTCCATGATAG 59.017 60.000 3.07 0.00 36.21 2.08
2084 2230 3.375299 CCTCCCTCGAGCAATAAACAAAG 59.625 47.826 6.99 0.00 34.49 2.77
2098 2244 3.150767 CCTCATACTTACTCCTCCCTCG 58.849 54.545 0.00 0.00 0.00 4.63
2206 2362 2.669569 CCACACCAAGCACCTCGG 60.670 66.667 0.00 0.00 0.00 4.63
2229 2387 7.418712 CCAACCTTTCCCGTATCTATTAACTCT 60.419 40.741 0.00 0.00 0.00 3.24
2261 2419 0.739561 ATAGAGTGTCTCGCCGGTTC 59.260 55.000 1.90 0.00 35.36 3.62
2262 2420 0.739561 GATAGAGTGTCTCGCCGGTT 59.260 55.000 1.90 0.00 35.36 4.44
2522 3030 4.226761 GGCGAACAACCATCAAACTTTAG 58.773 43.478 0.00 0.00 0.00 1.85
2978 3743 1.334556 GCATGAATATGAAGCGGCACA 59.665 47.619 1.45 2.23 36.36 4.57
3010 3778 3.005897 CCCCACGATAACCAGTATCTCAG 59.994 52.174 0.00 0.00 37.11 3.35
3306 7804 4.991776 TCAGAGATACTCATACCCTCCAG 58.008 47.826 0.00 0.00 32.06 3.86
3558 8068 2.844348 ACCACCTAACATTCCCTACAGG 59.156 50.000 0.00 0.00 0.00 4.00
3876 8396 5.349270 CCTTTGATTATACGAAACCGTGTCA 59.651 40.000 0.00 0.00 40.88 3.58
4047 8581 3.057174 GTGTTGGGTATTCGCATTTTCCA 60.057 43.478 0.00 0.00 36.44 3.53
4048 8582 3.507786 GTGTTGGGTATTCGCATTTTCC 58.492 45.455 0.00 0.00 36.44 3.13
4049 8583 3.192633 AGGTGTTGGGTATTCGCATTTTC 59.807 43.478 0.00 0.00 36.44 2.29
4050 8584 3.161866 AGGTGTTGGGTATTCGCATTTT 58.838 40.909 0.00 0.00 36.44 1.82
4051 8585 2.802719 AGGTGTTGGGTATTCGCATTT 58.197 42.857 0.00 0.00 36.44 2.32
4052 8586 2.491693 CAAGGTGTTGGGTATTCGCATT 59.508 45.455 0.00 0.00 36.44 3.56
4053 8587 2.091541 CAAGGTGTTGGGTATTCGCAT 58.908 47.619 0.00 0.00 36.44 4.73
4054 8588 1.202830 ACAAGGTGTTGGGTATTCGCA 60.203 47.619 0.00 0.00 38.07 5.10
4055 8589 1.530323 ACAAGGTGTTGGGTATTCGC 58.470 50.000 0.00 0.00 38.07 4.70
4070 8604 6.406370 TGGATACTCACTATGTTCCAACAAG 58.594 40.000 0.00 0.00 39.25 3.16
4201 8741 3.056465 CAGACTTGGTAGAGAAGACACCC 60.056 52.174 0.00 0.00 0.00 4.61
4394 16516 9.341899 GAAACAACCAAAACATCATATCAGTAC 57.658 33.333 0.00 0.00 0.00 2.73
4462 16593 8.158132 TGAAGTATCTAAGATAGATGAGTCCGT 58.842 37.037 9.58 0.00 44.81 4.69
4598 16735 0.107165 GGATGTAAGTGGGGTGCTCC 60.107 60.000 0.00 0.00 0.00 4.70
4599 16736 0.107165 GGGATGTAAGTGGGGTGCTC 60.107 60.000 0.00 0.00 0.00 4.26
4600 16737 1.571773 GGGGATGTAAGTGGGGTGCT 61.572 60.000 0.00 0.00 0.00 4.40
4659 16796 5.583854 CGGAATGTCAGTTCTGATCTGATTT 59.416 40.000 18.48 15.23 42.63 2.17
4682 16819 1.148310 AAAGCTGTTCACGGATGTCG 58.852 50.000 0.00 0.00 45.88 4.35
4698 16835 7.041644 CGTCCCTCTATCTCAGTAAGAGTAAAG 60.042 44.444 5.62 0.00 44.98 1.85
4801 16946 8.009974 GCTAACTATTGAGCCATACATTTAACG 58.990 37.037 0.00 0.00 32.25 3.18
4853 17005 3.548770 AGCAACACATGATACATCCCTG 58.451 45.455 0.00 0.00 0.00 4.45
4887 17168 8.648557 TGAATGGAGAACATACGAAAAGATAG 57.351 34.615 0.00 0.00 39.40 2.08
4888 17169 9.613428 ATTGAATGGAGAACATACGAAAAGATA 57.387 29.630 0.00 0.00 39.40 1.98
4889 17170 7.921786 TTGAATGGAGAACATACGAAAAGAT 57.078 32.000 0.00 0.00 39.40 2.40
4896 17177 8.915871 ATGAAAAATTGAATGGAGAACATACG 57.084 30.769 0.00 0.00 39.40 3.06
5004 17285 9.616156 CGTATATCCTAACATATAGTCCTCTGT 57.384 37.037 0.00 0.00 0.00 3.41
5075 17502 2.191400 TGTTAGCAGGAGGAAGCTCAT 58.809 47.619 0.00 0.00 42.05 2.90
5082 17509 2.356125 GCCAGAAATGTTAGCAGGAGGA 60.356 50.000 0.00 0.00 0.00 3.71
5083 17510 2.019984 GCCAGAAATGTTAGCAGGAGG 58.980 52.381 0.00 0.00 0.00 4.30
5127 17554 9.607285 GCAAAAGTAGATGAAAAATTAAGACGA 57.393 29.630 0.00 0.00 0.00 4.20
5176 17603 7.466746 TGAAAAAGGCTGCAGAAATATAACT 57.533 32.000 20.43 0.00 0.00 2.24
5192 17619 5.835113 TTTCTGTGGAGAGTTGAAAAAGG 57.165 39.130 0.00 0.00 0.00 3.11
5219 17646 3.368427 GGCACTAGCATAACTGTGACTGA 60.368 47.826 0.00 0.00 44.61 3.41
5220 17647 2.932614 GGCACTAGCATAACTGTGACTG 59.067 50.000 0.00 0.00 44.61 3.51
5251 17705 3.114065 GTGCAAGTACTATAGTCACGGC 58.886 50.000 9.12 10.17 0.00 5.68
5302 17756 7.798596 AGCCTGTATCATATTCAGAGTTTTG 57.201 36.000 0.00 0.00 30.18 2.44
5303 17757 8.928448 TCTAGCCTGTATCATATTCAGAGTTTT 58.072 33.333 0.00 0.00 30.18 2.43
5304 17758 8.484214 TCTAGCCTGTATCATATTCAGAGTTT 57.516 34.615 0.00 0.00 30.18 2.66
5325 17779 7.254387 GCATGTTCAGAGATGCTTTTACTCTAG 60.254 40.741 8.60 0.00 46.09 2.43
5351 17805 0.387367 CGTCCAGCGGATAGAATCGG 60.387 60.000 0.67 0.00 36.85 4.18
5352 17806 1.004277 GCGTCCAGCGGATAGAATCG 61.004 60.000 0.67 0.81 41.69 3.34
5353 17807 2.815722 GCGTCCAGCGGATAGAATC 58.184 57.895 0.67 0.00 41.69 2.52
5367 17821 6.755141 TGTAATTGTTAGAGGATGTAAGCGTC 59.245 38.462 0.00 0.00 37.40 5.19
5368 17822 6.534079 GTGTAATTGTTAGAGGATGTAAGCGT 59.466 38.462 0.00 0.00 0.00 5.07
5369 17823 6.018994 GGTGTAATTGTTAGAGGATGTAAGCG 60.019 42.308 0.00 0.00 0.00 4.68
5370 17824 6.018994 CGGTGTAATTGTTAGAGGATGTAAGC 60.019 42.308 0.00 0.00 0.00 3.09
5371 17825 6.018994 GCGGTGTAATTGTTAGAGGATGTAAG 60.019 42.308 0.00 0.00 0.00 2.34
5372 17826 5.813672 GCGGTGTAATTGTTAGAGGATGTAA 59.186 40.000 0.00 0.00 0.00 2.41
5373 17827 5.353938 GCGGTGTAATTGTTAGAGGATGTA 58.646 41.667 0.00 0.00 0.00 2.29
5374 17828 4.189231 GCGGTGTAATTGTTAGAGGATGT 58.811 43.478 0.00 0.00 0.00 3.06
5375 17829 3.245284 CGCGGTGTAATTGTTAGAGGATG 59.755 47.826 0.00 0.00 0.00 3.51
5376 17830 3.454375 CGCGGTGTAATTGTTAGAGGAT 58.546 45.455 0.00 0.00 0.00 3.24
5377 17831 2.417651 CCGCGGTGTAATTGTTAGAGGA 60.418 50.000 19.50 0.00 0.00 3.71
5378 17832 1.931172 CCGCGGTGTAATTGTTAGAGG 59.069 52.381 19.50 0.00 0.00 3.69
5379 17833 1.326548 GCCGCGGTGTAATTGTTAGAG 59.673 52.381 28.70 0.00 0.00 2.43
5380 17834 1.361793 GCCGCGGTGTAATTGTTAGA 58.638 50.000 28.70 0.00 0.00 2.10
5381 17835 0.375803 GGCCGCGGTGTAATTGTTAG 59.624 55.000 28.70 0.00 0.00 2.34
5382 17836 0.036199 AGGCCGCGGTGTAATTGTTA 60.036 50.000 28.70 0.00 0.00 2.41
5383 17837 1.302993 AGGCCGCGGTGTAATTGTT 60.303 52.632 28.70 0.00 0.00 2.83
5384 17838 1.743995 GAGGCCGCGGTGTAATTGT 60.744 57.895 28.70 2.01 0.00 2.71
5385 17839 1.449601 AGAGGCCGCGGTGTAATTG 60.450 57.895 28.70 0.00 0.00 2.32
5386 17840 1.449601 CAGAGGCCGCGGTGTAATT 60.450 57.895 28.70 5.94 0.00 1.40
5387 17841 2.186903 CAGAGGCCGCGGTGTAAT 59.813 61.111 28.70 8.28 0.00 1.89
5388 17842 4.752879 GCAGAGGCCGCGGTGTAA 62.753 66.667 28.70 0.00 0.00 2.41
5398 17852 0.250234 TGTGTGTCATAGGCAGAGGC 59.750 55.000 0.00 0.00 40.13 4.70
5399 17853 1.552337 AGTGTGTGTCATAGGCAGAGG 59.448 52.381 0.00 0.00 0.00 3.69
5400 17854 3.257393 GAAGTGTGTGTCATAGGCAGAG 58.743 50.000 0.00 0.00 0.00 3.35
5401 17855 2.632512 TGAAGTGTGTGTCATAGGCAGA 59.367 45.455 0.00 0.00 0.00 4.26
5402 17856 3.044235 TGAAGTGTGTGTCATAGGCAG 57.956 47.619 0.00 0.00 0.00 4.85
5403 17857 3.599343 GATGAAGTGTGTGTCATAGGCA 58.401 45.455 0.00 0.00 34.61 4.75
5404 17858 2.604914 CGATGAAGTGTGTGTCATAGGC 59.395 50.000 0.00 0.00 34.61 3.93
5405 17859 2.604914 GCGATGAAGTGTGTGTCATAGG 59.395 50.000 0.00 0.00 34.61 2.57
5406 17860 3.515630 AGCGATGAAGTGTGTGTCATAG 58.484 45.455 0.00 0.00 34.61 2.23
5407 17861 3.056891 TGAGCGATGAAGTGTGTGTCATA 60.057 43.478 0.00 0.00 34.61 2.15
5408 17862 2.289010 TGAGCGATGAAGTGTGTGTCAT 60.289 45.455 0.00 0.00 37.19 3.06
5409 17863 1.068434 TGAGCGATGAAGTGTGTGTCA 59.932 47.619 0.00 0.00 0.00 3.58
5410 17864 1.457303 GTGAGCGATGAAGTGTGTGTC 59.543 52.381 0.00 0.00 0.00 3.67
5411 17865 1.202521 TGTGAGCGATGAAGTGTGTGT 60.203 47.619 0.00 0.00 0.00 3.72
5412 17866 1.501169 TGTGAGCGATGAAGTGTGTG 58.499 50.000 0.00 0.00 0.00 3.82
5413 17867 2.341257 GATGTGAGCGATGAAGTGTGT 58.659 47.619 0.00 0.00 0.00 3.72
5414 17868 1.662629 GGATGTGAGCGATGAAGTGTG 59.337 52.381 0.00 0.00 0.00 3.82
5415 17869 1.276138 TGGATGTGAGCGATGAAGTGT 59.724 47.619 0.00 0.00 0.00 3.55
5416 17870 1.662629 GTGGATGTGAGCGATGAAGTG 59.337 52.381 0.00 0.00 0.00 3.16
5417 17871 1.276138 TGTGGATGTGAGCGATGAAGT 59.724 47.619 0.00 0.00 0.00 3.01
5418 17872 2.014335 TGTGGATGTGAGCGATGAAG 57.986 50.000 0.00 0.00 0.00 3.02
5419 17873 2.076100 GTTGTGGATGTGAGCGATGAA 58.924 47.619 0.00 0.00 0.00 2.57
5420 17874 1.675714 GGTTGTGGATGTGAGCGATGA 60.676 52.381 0.00 0.00 0.00 2.92
5421 17875 0.729116 GGTTGTGGATGTGAGCGATG 59.271 55.000 0.00 0.00 0.00 3.84
5422 17876 0.392998 GGGTTGTGGATGTGAGCGAT 60.393 55.000 0.00 0.00 0.00 4.58
5423 17877 1.003839 GGGTTGTGGATGTGAGCGA 60.004 57.895 0.00 0.00 0.00 4.93
5424 17878 0.888736 TTGGGTTGTGGATGTGAGCG 60.889 55.000 0.00 0.00 0.00 5.03
5425 17879 0.883833 CTTGGGTTGTGGATGTGAGC 59.116 55.000 0.00 0.00 0.00 4.26
5426 17880 2.276732 ACTTGGGTTGTGGATGTGAG 57.723 50.000 0.00 0.00 0.00 3.51
5427 17881 2.692557 CAAACTTGGGTTGTGGATGTGA 59.307 45.455 0.00 0.00 35.63 3.58
5428 17882 2.802774 GCAAACTTGGGTTGTGGATGTG 60.803 50.000 0.00 0.00 35.63 3.21
5429 17883 1.412343 GCAAACTTGGGTTGTGGATGT 59.588 47.619 0.00 0.00 35.63 3.06
5430 17884 1.411977 TGCAAACTTGGGTTGTGGATG 59.588 47.619 0.00 0.00 35.63 3.51
5431 17885 1.412343 GTGCAAACTTGGGTTGTGGAT 59.588 47.619 0.00 0.00 35.63 3.41
5432 17886 0.820871 GTGCAAACTTGGGTTGTGGA 59.179 50.000 0.00 0.00 35.63 4.02
5433 17887 0.534412 TGTGCAAACTTGGGTTGTGG 59.466 50.000 0.00 0.00 35.63 4.17
5434 17888 2.376808 TTGTGCAAACTTGGGTTGTG 57.623 45.000 0.00 0.00 35.63 3.33
5435 17889 2.301583 ACTTTGTGCAAACTTGGGTTGT 59.698 40.909 0.00 0.00 35.63 3.32
5436 17890 2.929398 GACTTTGTGCAAACTTGGGTTG 59.071 45.455 0.00 0.00 35.63 3.77
5437 17891 2.831526 AGACTTTGTGCAAACTTGGGTT 59.168 40.909 0.00 0.00 37.24 4.11
5438 17892 2.166254 CAGACTTTGTGCAAACTTGGGT 59.834 45.455 0.00 0.00 0.00 4.51
5439 17893 2.481795 CCAGACTTTGTGCAAACTTGGG 60.482 50.000 0.00 0.00 0.00 4.12
5440 17894 2.426738 TCCAGACTTTGTGCAAACTTGG 59.573 45.455 0.00 9.32 0.00 3.61
5441 17895 3.781079 TCCAGACTTTGTGCAAACTTG 57.219 42.857 0.00 0.00 0.00 3.16
5442 17896 3.429410 GCTTCCAGACTTTGTGCAAACTT 60.429 43.478 0.00 0.00 0.00 2.66
5443 17897 2.099756 GCTTCCAGACTTTGTGCAAACT 59.900 45.455 0.00 0.00 0.00 2.66
5444 17898 2.099756 AGCTTCCAGACTTTGTGCAAAC 59.900 45.455 0.00 0.00 0.00 2.93
5445 17899 2.378038 AGCTTCCAGACTTTGTGCAAA 58.622 42.857 0.00 0.00 0.00 3.68
5446 17900 2.057137 AGCTTCCAGACTTTGTGCAA 57.943 45.000 0.00 0.00 0.00 4.08
5447 17901 2.057137 AAGCTTCCAGACTTTGTGCA 57.943 45.000 0.00 0.00 0.00 4.57
5448 17902 4.568152 TTTAAGCTTCCAGACTTTGTGC 57.432 40.909 0.00 0.00 0.00 4.57
5449 17903 4.970003 CGTTTTAAGCTTCCAGACTTTGTG 59.030 41.667 0.00 0.00 0.00 3.33
5450 17904 4.036380 CCGTTTTAAGCTTCCAGACTTTGT 59.964 41.667 0.00 0.00 0.00 2.83
5451 17905 4.274950 TCCGTTTTAAGCTTCCAGACTTTG 59.725 41.667 0.00 0.00 0.00 2.77
5452 17906 4.457466 TCCGTTTTAAGCTTCCAGACTTT 58.543 39.130 0.00 0.00 0.00 2.66
5453 17907 4.081322 TCCGTTTTAAGCTTCCAGACTT 57.919 40.909 0.00 0.00 0.00 3.01
5454 17908 3.764237 TCCGTTTTAAGCTTCCAGACT 57.236 42.857 0.00 0.00 0.00 3.24
5455 17909 3.127030 CCATCCGTTTTAAGCTTCCAGAC 59.873 47.826 0.00 0.00 0.00 3.51
5456 17910 3.008594 TCCATCCGTTTTAAGCTTCCAGA 59.991 43.478 0.00 0.00 0.00 3.86
5457 17911 3.343617 TCCATCCGTTTTAAGCTTCCAG 58.656 45.455 0.00 0.00 0.00 3.86
5458 17912 3.426787 TCCATCCGTTTTAAGCTTCCA 57.573 42.857 0.00 0.00 0.00 3.53
5459 17913 4.380550 CCTTTCCATCCGTTTTAAGCTTCC 60.381 45.833 0.00 0.00 0.00 3.46
5460 17914 4.217767 ACCTTTCCATCCGTTTTAAGCTTC 59.782 41.667 0.00 0.00 0.00 3.86
5461 17915 4.149598 ACCTTTCCATCCGTTTTAAGCTT 58.850 39.130 3.48 3.48 0.00 3.74
5462 17916 3.763057 ACCTTTCCATCCGTTTTAAGCT 58.237 40.909 0.00 0.00 0.00 3.74
5463 17917 4.022676 TGAACCTTTCCATCCGTTTTAAGC 60.023 41.667 0.00 0.00 0.00 3.09
5464 17918 5.699097 TGAACCTTTCCATCCGTTTTAAG 57.301 39.130 0.00 0.00 0.00 1.85
5465 17919 6.658188 ATTGAACCTTTCCATCCGTTTTAA 57.342 33.333 0.00 0.00 0.00 1.52
5466 17920 6.492087 AGAATTGAACCTTTCCATCCGTTTTA 59.508 34.615 0.00 0.00 0.00 1.52
5467 17921 5.304357 AGAATTGAACCTTTCCATCCGTTTT 59.696 36.000 0.00 0.00 0.00 2.43
5468 17922 4.832823 AGAATTGAACCTTTCCATCCGTTT 59.167 37.500 0.00 0.00 0.00 3.60
5469 17923 4.407365 AGAATTGAACCTTTCCATCCGTT 58.593 39.130 0.00 0.00 0.00 4.44
5470 17924 4.034285 AGAATTGAACCTTTCCATCCGT 57.966 40.909 0.00 0.00 0.00 4.69
5471 17925 4.458989 TGAAGAATTGAACCTTTCCATCCG 59.541 41.667 0.00 0.00 0.00 4.18
5472 17926 5.982890 TGAAGAATTGAACCTTTCCATCC 57.017 39.130 0.00 0.00 0.00 3.51
5473 17927 6.810182 CACATGAAGAATTGAACCTTTCCATC 59.190 38.462 0.00 0.00 0.00 3.51
5474 17928 6.295462 CCACATGAAGAATTGAACCTTTCCAT 60.295 38.462 0.00 0.00 0.00 3.41
5475 17929 5.010922 CCACATGAAGAATTGAACCTTTCCA 59.989 40.000 0.00 0.00 0.00 3.53
5476 17930 5.011023 ACCACATGAAGAATTGAACCTTTCC 59.989 40.000 0.00 0.00 0.00 3.13
5477 17931 6.089249 ACCACATGAAGAATTGAACCTTTC 57.911 37.500 0.00 0.00 0.00 2.62
5478 17932 6.282930 CAACCACATGAAGAATTGAACCTTT 58.717 36.000 0.00 0.00 0.00 3.11
5479 17933 5.739935 GCAACCACATGAAGAATTGAACCTT 60.740 40.000 0.00 0.00 0.00 3.50
5480 17934 4.262164 GCAACCACATGAAGAATTGAACCT 60.262 41.667 0.00 0.00 0.00 3.50
5481 17935 3.989817 GCAACCACATGAAGAATTGAACC 59.010 43.478 0.00 0.00 0.00 3.62
5482 17936 4.874970 AGCAACCACATGAAGAATTGAAC 58.125 39.130 0.00 0.00 0.00 3.18
5483 17937 4.320421 CGAGCAACCACATGAAGAATTGAA 60.320 41.667 0.00 0.00 0.00 2.69
5484 17938 3.189080 CGAGCAACCACATGAAGAATTGA 59.811 43.478 0.00 0.00 0.00 2.57
5485 17939 3.058016 ACGAGCAACCACATGAAGAATTG 60.058 43.478 0.00 1.72 0.00 2.32
5486 17940 3.149196 ACGAGCAACCACATGAAGAATT 58.851 40.909 0.00 0.00 0.00 2.17
5487 17941 2.744202 GACGAGCAACCACATGAAGAAT 59.256 45.455 0.00 0.00 0.00 2.40
5488 17942 2.143122 GACGAGCAACCACATGAAGAA 58.857 47.619 0.00 0.00 0.00 2.52
5489 17943 1.608025 GGACGAGCAACCACATGAAGA 60.608 52.381 0.00 0.00 0.00 2.87
5490 17944 0.798776 GGACGAGCAACCACATGAAG 59.201 55.000 0.00 0.00 0.00 3.02
5491 17945 0.107643 TGGACGAGCAACCACATGAA 59.892 50.000 0.00 0.00 0.00 2.57
5492 17946 0.107643 TTGGACGAGCAACCACATGA 59.892 50.000 0.00 0.00 35.81 3.07
5493 17947 0.950836 TTTGGACGAGCAACCACATG 59.049 50.000 0.00 0.00 35.81 3.21
5494 17948 1.686355 TTTTGGACGAGCAACCACAT 58.314 45.000 0.00 0.00 35.81 3.21
5495 17949 1.606668 GATTTTGGACGAGCAACCACA 59.393 47.619 0.00 0.00 35.81 4.17
5496 17950 1.399727 CGATTTTGGACGAGCAACCAC 60.400 52.381 0.00 0.00 35.81 4.16
5497 17951 0.871722 CGATTTTGGACGAGCAACCA 59.128 50.000 0.00 0.00 0.00 3.67
5498 17952 0.168128 CCGATTTTGGACGAGCAACC 59.832 55.000 0.00 0.00 0.00 3.77
5499 17953 0.454452 GCCGATTTTGGACGAGCAAC 60.454 55.000 0.00 0.00 0.00 4.17
5500 17954 0.605319 AGCCGATTTTGGACGAGCAA 60.605 50.000 0.00 0.00 0.00 3.91
5501 17955 1.003839 AGCCGATTTTGGACGAGCA 60.004 52.632 0.00 0.00 0.00 4.26
5502 17956 1.298859 ACAGCCGATTTTGGACGAGC 61.299 55.000 0.00 0.00 0.00 5.03
5503 17957 0.443869 CACAGCCGATTTTGGACGAG 59.556 55.000 0.00 0.00 0.00 4.18
5504 17958 0.953471 CCACAGCCGATTTTGGACGA 60.953 55.000 0.00 0.00 0.00 4.20
5505 17959 0.953471 TCCACAGCCGATTTTGGACG 60.953 55.000 0.00 0.00 33.02 4.79
5506 17960 2.941210 TCCACAGCCGATTTTGGAC 58.059 52.632 0.00 0.00 33.02 4.02
5507 17961 0.608035 GGTCCACAGCCGATTTTGGA 60.608 55.000 0.00 0.00 35.71 3.53
5508 17962 1.883021 GGTCCACAGCCGATTTTGG 59.117 57.895 0.00 0.00 0.00 3.28
5518 17972 3.680786 TCTGTCCGCGGTCCACAG 61.681 66.667 29.92 29.92 39.18 3.66
5519 17973 3.986006 GTCTGTCCGCGGTCCACA 61.986 66.667 27.15 21.02 0.00 4.17
5520 17974 3.628280 GAGTCTGTCCGCGGTCCAC 62.628 68.421 27.15 17.12 0.00 4.02
5521 17975 3.371063 GAGTCTGTCCGCGGTCCA 61.371 66.667 27.15 21.20 0.00 4.02
5522 17976 3.063084 AGAGTCTGTCCGCGGTCC 61.063 66.667 27.15 17.53 0.00 4.46
5523 17977 2.143594 AACAGAGTCTGTCCGCGGTC 62.144 60.000 25.64 21.30 44.62 4.79
5524 17978 2.143594 GAACAGAGTCTGTCCGCGGT 62.144 60.000 25.64 9.42 44.62 5.68
5525 17979 1.444553 GAACAGAGTCTGTCCGCGG 60.445 63.158 25.64 22.12 44.62 6.46
5526 17980 1.797933 CGAACAGAGTCTGTCCGCG 60.798 63.158 25.64 22.85 44.62 6.46
5527 17981 4.154613 CGAACAGAGTCTGTCCGC 57.845 61.111 25.64 16.33 44.62 5.54
5528 17982 1.797933 CGCGAACAGAGTCTGTCCG 60.798 63.158 25.64 25.64 44.67 4.79
5529 17983 1.004277 CACGCGAACAGAGTCTGTCC 61.004 60.000 25.64 13.25 44.62 4.02
5530 17984 1.004277 CCACGCGAACAGAGTCTGTC 61.004 60.000 25.64 17.02 44.62 3.51
5532 17986 0.109086 ATCCACGCGAACAGAGTCTG 60.109 55.000 18.83 18.83 37.52 3.51
5533 17987 0.109086 CATCCACGCGAACAGAGTCT 60.109 55.000 15.93 0.00 0.00 3.24
5534 17988 1.078759 CCATCCACGCGAACAGAGTC 61.079 60.000 15.93 0.00 0.00 3.36
5535 17989 1.079819 CCATCCACGCGAACAGAGT 60.080 57.895 15.93 0.00 0.00 3.24
5536 17990 2.456119 GCCATCCACGCGAACAGAG 61.456 63.158 15.93 0.00 0.00 3.35
5537 17991 2.434185 GCCATCCACGCGAACAGA 60.434 61.111 15.93 3.55 0.00 3.41
5538 17992 3.499737 GGCCATCCACGCGAACAG 61.500 66.667 15.93 0.00 0.00 3.16
5545 17999 3.133464 ATTGTGCGGCCATCCACG 61.133 61.111 2.24 0.00 34.77 4.94
5546 18000 2.491152 CATTGTGCGGCCATCCAC 59.509 61.111 2.24 7.42 0.00 4.02
5547 18001 3.451004 GCATTGTGCGGCCATCCA 61.451 61.111 2.24 0.00 31.71 3.41
5564 18018 2.874086 TGATCACAGAGTGCACAAGTTG 59.126 45.455 21.04 13.23 32.98 3.16
5565 18019 3.198409 TGATCACAGAGTGCACAAGTT 57.802 42.857 21.04 0.00 32.98 2.66
5566 18020 2.916702 TGATCACAGAGTGCACAAGT 57.083 45.000 21.04 11.27 32.98 3.16
5567 18021 3.126514 GGATTGATCACAGAGTGCACAAG 59.873 47.826 21.04 10.58 34.37 3.16
5568 18022 3.076621 GGATTGATCACAGAGTGCACAA 58.923 45.455 21.04 0.88 34.91 3.33
5569 18023 2.038820 TGGATTGATCACAGAGTGCACA 59.961 45.455 21.04 0.00 32.98 4.57
5570 18024 2.703416 TGGATTGATCACAGAGTGCAC 58.297 47.619 9.40 9.40 32.98 4.57
5571 18025 3.275999 CATGGATTGATCACAGAGTGCA 58.724 45.455 0.00 0.00 32.98 4.57
5572 18026 2.617308 CCATGGATTGATCACAGAGTGC 59.383 50.000 5.56 0.00 32.98 4.40
5573 18027 4.146745 TCCATGGATTGATCACAGAGTG 57.853 45.455 11.44 0.00 34.45 3.51
5574 18028 4.849813 TTCCATGGATTGATCACAGAGT 57.150 40.909 17.06 0.00 0.00 3.24
5575 18029 4.945543 TGTTTCCATGGATTGATCACAGAG 59.054 41.667 17.06 0.00 0.00 3.35
5576 18030 4.920999 TGTTTCCATGGATTGATCACAGA 58.079 39.130 17.06 0.00 0.00 3.41
5577 18031 5.847111 ATGTTTCCATGGATTGATCACAG 57.153 39.130 17.06 0.00 0.00 3.66
5578 18032 5.715753 TCAATGTTTCCATGGATTGATCACA 59.284 36.000 19.93 14.11 0.00 3.58
5579 18033 6.038356 GTCAATGTTTCCATGGATTGATCAC 58.962 40.000 24.40 13.27 33.57 3.06
5580 18034 5.715753 TGTCAATGTTTCCATGGATTGATCA 59.284 36.000 24.40 20.61 33.57 2.92
5581 18035 6.038356 GTGTCAATGTTTCCATGGATTGATC 58.962 40.000 24.40 18.99 33.57 2.92
5582 18036 5.481122 TGTGTCAATGTTTCCATGGATTGAT 59.519 36.000 24.40 11.52 33.57 2.57
5583 18037 4.831710 TGTGTCAATGTTTCCATGGATTGA 59.168 37.500 19.93 19.93 33.57 2.57
5584 18038 5.136816 TGTGTCAATGTTTCCATGGATTG 57.863 39.130 17.06 16.75 33.57 2.67
5585 18039 5.718130 AGATGTGTCAATGTTTCCATGGATT 59.282 36.000 17.06 3.54 33.57 3.01
5586 18040 5.266788 AGATGTGTCAATGTTTCCATGGAT 58.733 37.500 17.06 0.00 33.57 3.41
5587 18041 4.665451 AGATGTGTCAATGTTTCCATGGA 58.335 39.130 11.44 11.44 0.00 3.41
5588 18042 5.184479 AGAAGATGTGTCAATGTTTCCATGG 59.816 40.000 4.97 4.97 0.00 3.66
5589 18043 6.090783 CAGAAGATGTGTCAATGTTTCCATG 58.909 40.000 0.00 0.00 0.00 3.66
5590 18044 5.336213 GCAGAAGATGTGTCAATGTTTCCAT 60.336 40.000 0.00 0.00 0.00 3.41
5591 18045 4.022935 GCAGAAGATGTGTCAATGTTTCCA 60.023 41.667 0.00 0.00 0.00 3.53
5592 18046 4.217118 AGCAGAAGATGTGTCAATGTTTCC 59.783 41.667 0.00 0.00 0.00 3.13
5593 18047 5.368256 AGCAGAAGATGTGTCAATGTTTC 57.632 39.130 0.00 0.00 0.00 2.78
5594 18048 4.083643 CGAGCAGAAGATGTGTCAATGTTT 60.084 41.667 0.00 0.00 0.00 2.83
5595 18049 3.434641 CGAGCAGAAGATGTGTCAATGTT 59.565 43.478 0.00 0.00 0.00 2.71
5596 18050 2.998670 CGAGCAGAAGATGTGTCAATGT 59.001 45.455 0.00 0.00 0.00 2.71
5597 18051 3.256558 TCGAGCAGAAGATGTGTCAATG 58.743 45.455 0.00 0.00 0.00 2.82
5598 18052 3.056250 ACTCGAGCAGAAGATGTGTCAAT 60.056 43.478 13.61 0.00 0.00 2.57
5599 18053 2.297315 ACTCGAGCAGAAGATGTGTCAA 59.703 45.455 13.61 0.00 0.00 3.18
5600 18054 1.889170 ACTCGAGCAGAAGATGTGTCA 59.111 47.619 13.61 0.00 0.00 3.58
5601 18055 2.257894 CACTCGAGCAGAAGATGTGTC 58.742 52.381 13.61 0.00 0.00 3.67
5602 18056 1.671261 GCACTCGAGCAGAAGATGTGT 60.671 52.381 13.61 0.00 0.00 3.72
5603 18057 0.997932 GCACTCGAGCAGAAGATGTG 59.002 55.000 13.61 1.51 0.00 3.21
5604 18058 0.108424 GGCACTCGAGCAGAAGATGT 60.108 55.000 13.61 0.00 35.83 3.06
5605 18059 0.809241 GGGCACTCGAGCAGAAGATG 60.809 60.000 13.61 2.14 35.83 2.90
5606 18060 1.260538 TGGGCACTCGAGCAGAAGAT 61.261 55.000 13.61 0.00 35.83 2.40
5607 18061 1.260538 ATGGGCACTCGAGCAGAAGA 61.261 55.000 13.61 0.00 35.83 2.87
5608 18062 0.392193 AATGGGCACTCGAGCAGAAG 60.392 55.000 13.61 0.00 35.83 2.85
5609 18063 0.391661 GAATGGGCACTCGAGCAGAA 60.392 55.000 13.61 0.00 35.83 3.02
5610 18064 1.219124 GAATGGGCACTCGAGCAGA 59.781 57.895 13.61 0.00 35.83 4.26
5611 18065 1.078918 TGAATGGGCACTCGAGCAG 60.079 57.895 13.61 6.73 35.83 4.24
5612 18066 1.078918 CTGAATGGGCACTCGAGCA 60.079 57.895 13.61 2.16 35.83 4.26
5613 18067 2.467826 GCTGAATGGGCACTCGAGC 61.468 63.158 13.61 0.00 0.00 5.03
5614 18068 0.674581 TTGCTGAATGGGCACTCGAG 60.675 55.000 11.84 11.84 39.55 4.04
5615 18069 0.674581 CTTGCTGAATGGGCACTCGA 60.675 55.000 0.00 0.00 39.55 4.04
5616 18070 1.798735 CTTGCTGAATGGGCACTCG 59.201 57.895 0.00 0.00 39.55 4.18
5617 18071 1.246056 TGCTTGCTGAATGGGCACTC 61.246 55.000 0.00 0.00 39.55 3.51
5618 18072 0.828762 TTGCTTGCTGAATGGGCACT 60.829 50.000 0.00 0.00 39.55 4.40
5619 18073 0.389426 CTTGCTTGCTGAATGGGCAC 60.389 55.000 0.00 0.00 39.55 5.01
5620 18074 0.828762 ACTTGCTTGCTGAATGGGCA 60.829 50.000 0.00 0.00 37.97 5.36
5621 18075 1.176527 TACTTGCTTGCTGAATGGGC 58.823 50.000 0.00 0.00 0.00 5.36
5622 18076 2.100252 CCATACTTGCTTGCTGAATGGG 59.900 50.000 0.00 0.00 30.90 4.00
5623 18077 2.756760 ACCATACTTGCTTGCTGAATGG 59.243 45.455 11.98 11.98 38.66 3.16
5624 18078 4.418392 GAACCATACTTGCTTGCTGAATG 58.582 43.478 0.00 0.00 0.00 2.67
5625 18079 3.127548 CGAACCATACTTGCTTGCTGAAT 59.872 43.478 0.00 0.00 0.00 2.57
5626 18080 2.483877 CGAACCATACTTGCTTGCTGAA 59.516 45.455 0.00 0.00 0.00 3.02
5627 18081 2.076100 CGAACCATACTTGCTTGCTGA 58.924 47.619 0.00 0.00 0.00 4.26
5628 18082 1.466360 GCGAACCATACTTGCTTGCTG 60.466 52.381 0.00 0.00 0.00 4.41
5629 18083 0.804989 GCGAACCATACTTGCTTGCT 59.195 50.000 0.00 0.00 0.00 3.91
5630 18084 0.179163 GGCGAACCATACTTGCTTGC 60.179 55.000 0.00 0.00 35.26 4.01
5631 18085 1.453155 AGGCGAACCATACTTGCTTG 58.547 50.000 0.00 0.00 39.06 4.01
5632 18086 2.084546 GAAGGCGAACCATACTTGCTT 58.915 47.619 0.00 0.00 39.06 3.91
5633 18087 1.003118 TGAAGGCGAACCATACTTGCT 59.997 47.619 0.00 0.00 39.06 3.91
5634 18088 1.398390 CTGAAGGCGAACCATACTTGC 59.602 52.381 0.00 0.00 39.06 4.01
5635 18089 1.398390 GCTGAAGGCGAACCATACTTG 59.602 52.381 0.00 0.00 39.06 3.16
5636 18090 1.739067 GCTGAAGGCGAACCATACTT 58.261 50.000 0.00 0.00 39.06 2.24
5637 18091 3.460648 GCTGAAGGCGAACCATACT 57.539 52.632 0.00 0.00 39.06 2.12
5647 18101 1.377856 GGTGGGAAGAGCTGAAGGC 60.378 63.158 0.00 0.00 42.19 4.35
5648 18102 1.301293 GGGTGGGAAGAGCTGAAGG 59.699 63.158 0.00 0.00 0.00 3.46
5649 18103 0.035630 CTGGGTGGGAAGAGCTGAAG 60.036 60.000 0.00 0.00 0.00 3.02
5650 18104 1.492133 CCTGGGTGGGAAGAGCTGAA 61.492 60.000 0.00 0.00 0.00 3.02
5651 18105 1.920325 CCTGGGTGGGAAGAGCTGA 60.920 63.158 0.00 0.00 0.00 4.26
5652 18106 2.673523 CCTGGGTGGGAAGAGCTG 59.326 66.667 0.00 0.00 0.00 4.24
5683 18137 2.661866 AGTTGTGGTCGTGCGAGC 60.662 61.111 15.64 15.64 42.37 5.03
5684 18138 2.943345 GCAGTTGTGGTCGTGCGAG 61.943 63.158 0.00 0.00 0.00 5.03
5685 18139 2.964925 GCAGTTGTGGTCGTGCGA 60.965 61.111 0.00 0.00 0.00 5.10
5686 18140 4.012895 GGCAGTTGTGGTCGTGCG 62.013 66.667 0.00 0.00 36.76 5.34
5687 18141 3.660111 GGGCAGTTGTGGTCGTGC 61.660 66.667 0.00 0.00 35.07 5.34
5688 18142 1.525995 AAGGGCAGTTGTGGTCGTG 60.526 57.895 0.00 0.00 0.00 4.35
5689 18143 1.525995 CAAGGGCAGTTGTGGTCGT 60.526 57.895 0.00 0.00 0.00 4.34
5690 18144 2.260869 CCAAGGGCAGTTGTGGTCG 61.261 63.158 0.00 0.00 0.00 4.79
5691 18145 0.251341 ATCCAAGGGCAGTTGTGGTC 60.251 55.000 0.00 0.00 32.68 4.02
5692 18146 0.540365 CATCCAAGGGCAGTTGTGGT 60.540 55.000 0.00 0.00 32.68 4.16
5693 18147 1.252904 CCATCCAAGGGCAGTTGTGG 61.253 60.000 0.00 0.00 0.00 4.17
5694 18148 0.540365 ACCATCCAAGGGCAGTTGTG 60.540 55.000 0.00 0.00 0.00 3.33
5695 18149 1.004745 CTACCATCCAAGGGCAGTTGT 59.995 52.381 0.00 0.00 0.00 3.32
5696 18150 1.281867 TCTACCATCCAAGGGCAGTTG 59.718 52.381 0.00 0.00 0.00 3.16
5697 18151 1.668826 TCTACCATCCAAGGGCAGTT 58.331 50.000 0.00 0.00 0.00 3.16
5698 18152 1.561542 CTTCTACCATCCAAGGGCAGT 59.438 52.381 0.00 0.00 0.00 4.40
5699 18153 1.839994 TCTTCTACCATCCAAGGGCAG 59.160 52.381 0.00 0.00 0.00 4.85
5700 18154 1.965414 TCTTCTACCATCCAAGGGCA 58.035 50.000 0.00 0.00 0.00 5.36
5701 18155 2.505819 TCTTCTTCTACCATCCAAGGGC 59.494 50.000 0.00 0.00 0.00 5.19
5702 18156 3.118223 GGTCTTCTTCTACCATCCAAGGG 60.118 52.174 0.00 0.00 35.73 3.95
5703 18157 3.777522 AGGTCTTCTTCTACCATCCAAGG 59.222 47.826 0.00 0.00 38.30 3.61
5704 18158 4.467795 TGAGGTCTTCTTCTACCATCCAAG 59.532 45.833 0.00 0.00 38.30 3.61
5705 18159 4.425772 TGAGGTCTTCTTCTACCATCCAA 58.574 43.478 0.00 0.00 38.30 3.53
5706 18160 4.061131 TGAGGTCTTCTTCTACCATCCA 57.939 45.455 0.00 0.00 38.30 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.