Multiple sequence alignment - TraesCS5A01G351700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G351700 | chr5A | 100.000 | 3290 | 0 | 0 | 1 | 3290 | 554204773 | 554201484 | 0.000000e+00 | 6076.0 |
1 | TraesCS5A01G351700 | chr5A | 79.908 | 1309 | 224 | 22 | 981 | 2282 | 554221266 | 554219990 | 0.000000e+00 | 924.0 |
2 | TraesCS5A01G351700 | chr5A | 78.566 | 1423 | 260 | 28 | 972 | 2378 | 554238490 | 554237097 | 0.000000e+00 | 896.0 |
3 | TraesCS5A01G351700 | chr5A | 82.840 | 169 | 29 | 0 | 2618 | 2786 | 554219338 | 554219170 | 5.690000e-33 | 152.0 |
4 | TraesCS5A01G351700 | chr5A | 81.657 | 169 | 31 | 0 | 2618 | 2786 | 554236831 | 554236663 | 1.230000e-29 | 141.0 |
5 | TraesCS5A01G351700 | chr5A | 90.625 | 64 | 6 | 0 | 512 | 575 | 554186988 | 554186925 | 5.850000e-13 | 86.1 |
6 | TraesCS5A01G351700 | chr5D | 94.120 | 2228 | 85 | 12 | 626 | 2823 | 438592386 | 438590175 | 0.000000e+00 | 3347.0 |
7 | TraesCS5A01G351700 | chr5D | 93.760 | 625 | 31 | 2 | 1202 | 1818 | 438688950 | 438688326 | 0.000000e+00 | 931.0 |
8 | TraesCS5A01G351700 | chr5D | 78.786 | 1433 | 257 | 30 | 964 | 2378 | 438660799 | 438659396 | 0.000000e+00 | 918.0 |
9 | TraesCS5A01G351700 | chr5D | 78.531 | 1430 | 264 | 26 | 964 | 2378 | 438724711 | 438723310 | 0.000000e+00 | 900.0 |
10 | TraesCS5A01G351700 | chr5D | 90.495 | 505 | 18 | 4 | 2214 | 2694 | 438666019 | 438665521 | 9.950000e-180 | 640.0 |
11 | TraesCS5A01G351700 | chr5D | 92.664 | 259 | 12 | 2 | 1958 | 2216 | 438684149 | 438683898 | 1.870000e-97 | 366.0 |
12 | TraesCS5A01G351700 | chr5D | 84.267 | 375 | 46 | 6 | 2919 | 3290 | 438590175 | 438589811 | 1.450000e-93 | 353.0 |
13 | TraesCS5A01G351700 | chr5D | 93.103 | 203 | 10 | 4 | 435 | 634 | 438592626 | 438592425 | 8.930000e-76 | 294.0 |
14 | TraesCS5A01G351700 | chr5D | 90.000 | 190 | 14 | 5 | 264 | 450 | 438592986 | 438592799 | 1.180000e-59 | 241.0 |
15 | TraesCS5A01G351700 | chr5D | 87.586 | 145 | 11 | 2 | 1811 | 1955 | 438685040 | 438684903 | 9.450000e-36 | 161.0 |
16 | TraesCS5A01G351700 | chr5D | 95.050 | 101 | 5 | 0 | 264 | 364 | 438689093 | 438688993 | 3.400000e-35 | 159.0 |
17 | TraesCS5A01G351700 | chr5D | 88.136 | 118 | 12 | 2 | 512 | 628 | 438572003 | 438571887 | 4.430000e-29 | 139.0 |
18 | TraesCS5A01G351700 | chr5D | 81.988 | 161 | 29 | 0 | 2626 | 2786 | 438659137 | 438658977 | 1.590000e-28 | 137.0 |
19 | TraesCS5A01G351700 | chr5D | 81.366 | 161 | 30 | 0 | 2626 | 2786 | 438723026 | 438722866 | 7.410000e-27 | 132.0 |
20 | TraesCS5A01G351700 | chr5B | 92.960 | 2230 | 89 | 14 | 626 | 2823 | 533496958 | 533494765 | 0.000000e+00 | 3186.0 |
21 | TraesCS5A01G351700 | chr5B | 79.176 | 1359 | 240 | 26 | 1038 | 2378 | 533575323 | 533573990 | 0.000000e+00 | 902.0 |
22 | TraesCS5A01G351700 | chr5B | 77.444 | 1565 | 279 | 42 | 826 | 2352 | 533568060 | 533566532 | 0.000000e+00 | 867.0 |
23 | TraesCS5A01G351700 | chr5B | 83.733 | 375 | 48 | 6 | 2919 | 3290 | 533494765 | 533494401 | 3.140000e-90 | 342.0 |
24 | TraesCS5A01G351700 | chr5B | 94.186 | 172 | 9 | 1 | 260 | 430 | 533498317 | 533498146 | 9.060000e-66 | 261.0 |
25 | TraesCS5A01G351700 | chr5B | 84.892 | 139 | 21 | 0 | 2619 | 2757 | 533523684 | 533523546 | 1.230000e-29 | 141.0 |
26 | TraesCS5A01G351700 | chr5B | 81.657 | 169 | 31 | 0 | 2618 | 2786 | 533573725 | 533573557 | 1.230000e-29 | 141.0 |
27 | TraesCS5A01G351700 | chr4B | 99.623 | 265 | 0 | 1 | 1 | 265 | 481232146 | 481232409 | 1.780000e-132 | 483.0 |
28 | TraesCS5A01G351700 | chr4A | 99.251 | 267 | 2 | 0 | 1 | 267 | 740217665 | 740217931 | 1.780000e-132 | 483.0 |
29 | TraesCS5A01G351700 | chr4A | 100.000 | 260 | 0 | 0 | 1 | 260 | 729294461 | 729294202 | 6.380000e-132 | 481.0 |
30 | TraesCS5A01G351700 | chr7A | 100.000 | 260 | 0 | 0 | 1 | 260 | 732908085 | 732908344 | 6.380000e-132 | 481.0 |
31 | TraesCS5A01G351700 | chr2B | 100.000 | 260 | 0 | 0 | 1 | 260 | 77770583 | 77770842 | 6.380000e-132 | 481.0 |
32 | TraesCS5A01G351700 | chr6B | 100.000 | 259 | 0 | 0 | 1 | 259 | 179705157 | 179704899 | 2.300000e-131 | 479.0 |
33 | TraesCS5A01G351700 | chr6B | 95.000 | 40 | 2 | 0 | 2569 | 2608 | 11029364 | 11029325 | 2.740000e-06 | 63.9 |
34 | TraesCS5A01G351700 | chr3A | 99.617 | 261 | 1 | 0 | 1 | 261 | 120322 | 120582 | 8.260000e-131 | 477.0 |
35 | TraesCS5A01G351700 | chr3A | 99.609 | 256 | 1 | 0 | 1 | 256 | 738616106 | 738616361 | 4.970000e-128 | 468.0 |
36 | TraesCS5A01G351700 | chrUn | 99.609 | 256 | 1 | 0 | 1 | 256 | 340645949 | 340646204 | 4.970000e-128 | 468.0 |
37 | TraesCS5A01G351700 | chr6A | 93.038 | 158 | 10 | 1 | 260 | 416 | 100742082 | 100742239 | 2.550000e-56 | 230.0 |
38 | TraesCS5A01G351700 | chr1D | 93.333 | 45 | 2 | 1 | 2568 | 2612 | 13354791 | 13354834 | 7.620000e-07 | 65.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G351700 | chr5A | 554201484 | 554204773 | 3289 | True | 6076.00 | 6076 | 100.0000 | 1 | 3290 | 1 | chr5A.!!$R2 | 3289 |
1 | TraesCS5A01G351700 | chr5A | 554219170 | 554221266 | 2096 | True | 538.00 | 924 | 81.3740 | 981 | 2786 | 2 | chr5A.!!$R3 | 1805 |
2 | TraesCS5A01G351700 | chr5A | 554236663 | 554238490 | 1827 | True | 518.50 | 896 | 80.1115 | 972 | 2786 | 2 | chr5A.!!$R4 | 1814 |
3 | TraesCS5A01G351700 | chr5D | 438589811 | 438592986 | 3175 | True | 1058.75 | 3347 | 90.3725 | 264 | 3290 | 4 | chr5D.!!$R3 | 3026 |
4 | TraesCS5A01G351700 | chr5D | 438658977 | 438660799 | 1822 | True | 527.50 | 918 | 80.3870 | 964 | 2786 | 2 | chr5D.!!$R4 | 1822 |
5 | TraesCS5A01G351700 | chr5D | 438722866 | 438724711 | 1845 | True | 516.00 | 900 | 79.9485 | 964 | 2786 | 2 | chr5D.!!$R6 | 1822 |
6 | TraesCS5A01G351700 | chr5D | 438683898 | 438689093 | 5195 | True | 404.25 | 931 | 92.2650 | 264 | 2216 | 4 | chr5D.!!$R5 | 1952 |
7 | TraesCS5A01G351700 | chr5B | 533494401 | 533498317 | 3916 | True | 1263.00 | 3186 | 90.2930 | 260 | 3290 | 3 | chr5B.!!$R3 | 3030 |
8 | TraesCS5A01G351700 | chr5B | 533566532 | 533568060 | 1528 | True | 867.00 | 867 | 77.4440 | 826 | 2352 | 1 | chr5B.!!$R2 | 1526 |
9 | TraesCS5A01G351700 | chr5B | 533573557 | 533575323 | 1766 | True | 521.50 | 902 | 80.4165 | 1038 | 2786 | 2 | chr5B.!!$R4 | 1748 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
26 | 27 | 0.035036 | TTTGGATGGCGGTCGTGTAA | 59.965 | 50.0 | 0.00 | 0.00 | 0.00 | 2.41 | F |
217 | 218 | 0.169672 | GATGGCCGTATGCATCATGC | 59.830 | 55.0 | 0.19 | 1.35 | 45.29 | 4.06 | F |
786 | 1784 | 0.246086 | CTCAGAGGTGGACAGCTGAC | 59.754 | 60.0 | 23.35 | 15.15 | 39.57 | 3.51 | F |
2170 | 7250 | 0.240145 | TACGTTCGAGGAGTGCACAG | 59.760 | 55.0 | 21.04 | 4.83 | 0.00 | 3.66 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1195 | 2220 | 0.472044 | ATGCCGGTGTACCATATGCA | 59.528 | 50.000 | 1.9 | 0.0 | 35.14 | 3.96 | R |
2147 | 7227 | 0.520404 | GCACTCCTCGAACGTACTCA | 59.480 | 55.000 | 0.0 | 0.0 | 0.00 | 3.41 | R |
2257 | 7340 | 1.475280 | CCATTCCACACCAAGCATCTG | 59.525 | 52.381 | 0.0 | 0.0 | 0.00 | 2.90 | R |
3172 | 8637 | 0.026674 | CCATTCTGTGTGTATGCGCG | 59.973 | 55.000 | 0.0 | 0.0 | 0.00 | 6.86 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
20 | 21 | 3.131478 | CCGGTTTGGATGGCGGTC | 61.131 | 66.667 | 0.00 | 0.00 | 42.00 | 4.79 |
21 | 22 | 3.496131 | CGGTTTGGATGGCGGTCG | 61.496 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
22 | 23 | 2.359478 | GGTTTGGATGGCGGTCGT | 60.359 | 61.111 | 0.00 | 0.00 | 0.00 | 4.34 |
23 | 24 | 2.686816 | GGTTTGGATGGCGGTCGTG | 61.687 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
24 | 25 | 1.964373 | GTTTGGATGGCGGTCGTGT | 60.964 | 57.895 | 0.00 | 0.00 | 0.00 | 4.49 |
25 | 26 | 0.671163 | GTTTGGATGGCGGTCGTGTA | 60.671 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
26 | 27 | 0.035036 | TTTGGATGGCGGTCGTGTAA | 59.965 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
27 | 28 | 0.671163 | TTGGATGGCGGTCGTGTAAC | 60.671 | 55.000 | 0.00 | 0.00 | 0.00 | 2.50 |
28 | 29 | 1.079681 | GGATGGCGGTCGTGTAACA | 60.080 | 57.895 | 0.00 | 0.00 | 35.74 | 2.41 |
29 | 30 | 1.082117 | GGATGGCGGTCGTGTAACAG | 61.082 | 60.000 | 0.00 | 0.00 | 35.74 | 3.16 |
30 | 31 | 1.079405 | ATGGCGGTCGTGTAACAGG | 60.079 | 57.895 | 0.00 | 0.00 | 35.74 | 4.00 |
31 | 32 | 1.537814 | ATGGCGGTCGTGTAACAGGA | 61.538 | 55.000 | 0.00 | 0.00 | 35.74 | 3.86 |
32 | 33 | 1.217244 | GGCGGTCGTGTAACAGGAT | 59.783 | 57.895 | 0.00 | 0.00 | 35.74 | 3.24 |
33 | 34 | 0.457035 | GGCGGTCGTGTAACAGGATA | 59.543 | 55.000 | 0.00 | 0.00 | 35.74 | 2.59 |
34 | 35 | 1.535437 | GGCGGTCGTGTAACAGGATAG | 60.535 | 57.143 | 0.00 | 0.00 | 35.74 | 2.08 |
35 | 36 | 1.535437 | GCGGTCGTGTAACAGGATAGG | 60.535 | 57.143 | 0.00 | 0.00 | 35.74 | 2.57 |
36 | 37 | 1.535437 | CGGTCGTGTAACAGGATAGGC | 60.535 | 57.143 | 0.00 | 0.00 | 35.74 | 3.93 |
37 | 38 | 1.479323 | GGTCGTGTAACAGGATAGGCA | 59.521 | 52.381 | 0.00 | 0.00 | 35.74 | 4.75 |
38 | 39 | 2.093869 | GGTCGTGTAACAGGATAGGCAA | 60.094 | 50.000 | 0.00 | 0.00 | 35.74 | 4.52 |
39 | 40 | 3.431766 | GGTCGTGTAACAGGATAGGCAAT | 60.432 | 47.826 | 0.00 | 0.00 | 35.74 | 3.56 |
40 | 41 | 4.189231 | GTCGTGTAACAGGATAGGCAATT | 58.811 | 43.478 | 0.00 | 0.00 | 35.74 | 2.32 |
41 | 42 | 5.353938 | GTCGTGTAACAGGATAGGCAATTA | 58.646 | 41.667 | 0.00 | 0.00 | 35.74 | 1.40 |
42 | 43 | 5.462398 | GTCGTGTAACAGGATAGGCAATTAG | 59.538 | 44.000 | 0.00 | 0.00 | 35.74 | 1.73 |
43 | 44 | 5.128171 | TCGTGTAACAGGATAGGCAATTAGT | 59.872 | 40.000 | 0.00 | 0.00 | 35.74 | 2.24 |
44 | 45 | 5.815740 | CGTGTAACAGGATAGGCAATTAGTT | 59.184 | 40.000 | 0.00 | 0.00 | 35.74 | 2.24 |
45 | 46 | 6.315393 | CGTGTAACAGGATAGGCAATTAGTTT | 59.685 | 38.462 | 0.00 | 0.00 | 35.74 | 2.66 |
46 | 47 | 7.493320 | CGTGTAACAGGATAGGCAATTAGTTTA | 59.507 | 37.037 | 0.00 | 0.00 | 35.74 | 2.01 |
47 | 48 | 8.610035 | GTGTAACAGGATAGGCAATTAGTTTAC | 58.390 | 37.037 | 0.00 | 0.00 | 36.32 | 2.01 |
48 | 49 | 7.771826 | TGTAACAGGATAGGCAATTAGTTTACC | 59.228 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
49 | 50 | 6.576778 | ACAGGATAGGCAATTAGTTTACCT | 57.423 | 37.500 | 0.00 | 0.00 | 34.42 | 3.08 |
50 | 51 | 6.357367 | ACAGGATAGGCAATTAGTTTACCTG | 58.643 | 40.000 | 0.00 | 0.00 | 44.25 | 4.00 |
51 | 52 | 6.069615 | ACAGGATAGGCAATTAGTTTACCTGT | 60.070 | 38.462 | 0.00 | 0.00 | 45.88 | 4.00 |
52 | 53 | 6.483640 | CAGGATAGGCAATTAGTTTACCTGTC | 59.516 | 42.308 | 0.00 | 0.00 | 37.77 | 3.51 |
53 | 54 | 6.387220 | AGGATAGGCAATTAGTTTACCTGTCT | 59.613 | 38.462 | 11.02 | 0.00 | 38.35 | 3.41 |
54 | 55 | 7.567622 | AGGATAGGCAATTAGTTTACCTGTCTA | 59.432 | 37.037 | 11.02 | 0.00 | 38.35 | 2.59 |
55 | 56 | 8.376270 | GGATAGGCAATTAGTTTACCTGTCTAT | 58.624 | 37.037 | 11.02 | 0.00 | 37.57 | 1.98 |
56 | 57 | 9.780186 | GATAGGCAATTAGTTTACCTGTCTATT | 57.220 | 33.333 | 0.00 | 0.00 | 35.59 | 1.73 |
58 | 59 | 8.879427 | AGGCAATTAGTTTACCTGTCTATTTT | 57.121 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
59 | 60 | 8.739972 | AGGCAATTAGTTTACCTGTCTATTTTG | 58.260 | 33.333 | 0.00 | 0.00 | 0.00 | 2.44 |
60 | 61 | 7.973944 | GGCAATTAGTTTACCTGTCTATTTTGG | 59.026 | 37.037 | 0.00 | 0.00 | 0.00 | 3.28 |
61 | 62 | 8.736244 | GCAATTAGTTTACCTGTCTATTTTGGA | 58.264 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
63 | 64 | 7.916914 | TTAGTTTACCTGTCTATTTTGGAGC | 57.083 | 36.000 | 0.00 | 0.00 | 0.00 | 4.70 |
64 | 65 | 5.254115 | AGTTTACCTGTCTATTTTGGAGCC | 58.746 | 41.667 | 0.00 | 0.00 | 0.00 | 4.70 |
65 | 66 | 4.919774 | TTACCTGTCTATTTTGGAGCCA | 57.080 | 40.909 | 0.00 | 0.00 | 0.00 | 4.75 |
66 | 67 | 3.806949 | ACCTGTCTATTTTGGAGCCAA | 57.193 | 42.857 | 0.00 | 0.00 | 0.00 | 4.52 |
67 | 68 | 4.112634 | ACCTGTCTATTTTGGAGCCAAA | 57.887 | 40.909 | 10.49 | 10.49 | 43.23 | 3.28 |
68 | 69 | 3.826729 | ACCTGTCTATTTTGGAGCCAAAC | 59.173 | 43.478 | 13.90 | 4.37 | 44.39 | 2.93 |
69 | 70 | 3.119849 | CCTGTCTATTTTGGAGCCAAACG | 60.120 | 47.826 | 13.90 | 6.51 | 44.39 | 3.60 |
70 | 71 | 2.817258 | TGTCTATTTTGGAGCCAAACGG | 59.183 | 45.455 | 13.90 | 7.67 | 44.39 | 4.44 |
79 | 80 | 3.354678 | GCCAAACGGCTGTGATGT | 58.645 | 55.556 | 0.00 | 0.00 | 46.85 | 3.06 |
80 | 81 | 2.550487 | GCCAAACGGCTGTGATGTA | 58.450 | 52.632 | 0.00 | 0.00 | 46.85 | 2.29 |
81 | 82 | 1.094785 | GCCAAACGGCTGTGATGTAT | 58.905 | 50.000 | 0.00 | 0.00 | 46.85 | 2.29 |
82 | 83 | 2.285083 | GCCAAACGGCTGTGATGTATA | 58.715 | 47.619 | 0.00 | 0.00 | 46.85 | 1.47 |
83 | 84 | 2.680841 | GCCAAACGGCTGTGATGTATAA | 59.319 | 45.455 | 0.00 | 0.00 | 46.85 | 0.98 |
84 | 85 | 3.242739 | GCCAAACGGCTGTGATGTATAAG | 60.243 | 47.826 | 0.00 | 0.00 | 46.85 | 1.73 |
85 | 86 | 3.938963 | CCAAACGGCTGTGATGTATAAGT | 59.061 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
86 | 87 | 4.201812 | CCAAACGGCTGTGATGTATAAGTG | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
87 | 88 | 2.550978 | ACGGCTGTGATGTATAAGTGC | 58.449 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
88 | 89 | 2.168521 | ACGGCTGTGATGTATAAGTGCT | 59.831 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
89 | 90 | 3.198068 | CGGCTGTGATGTATAAGTGCTT | 58.802 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
90 | 91 | 3.623060 | CGGCTGTGATGTATAAGTGCTTT | 59.377 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
91 | 92 | 4.494690 | CGGCTGTGATGTATAAGTGCTTTG | 60.495 | 45.833 | 0.00 | 0.00 | 0.00 | 2.77 |
92 | 93 | 4.201950 | GGCTGTGATGTATAAGTGCTTTGG | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.28 |
93 | 94 | 4.731773 | GCTGTGATGTATAAGTGCTTTGGC | 60.732 | 45.833 | 0.00 | 0.00 | 39.26 | 4.52 |
94 | 95 | 4.588899 | TGTGATGTATAAGTGCTTTGGCT | 58.411 | 39.130 | 0.00 | 0.00 | 39.59 | 4.75 |
95 | 96 | 5.739959 | TGTGATGTATAAGTGCTTTGGCTA | 58.260 | 37.500 | 0.00 | 0.00 | 39.59 | 3.93 |
96 | 97 | 5.817296 | TGTGATGTATAAGTGCTTTGGCTAG | 59.183 | 40.000 | 0.00 | 0.00 | 39.59 | 3.42 |
97 | 98 | 4.816385 | TGATGTATAAGTGCTTTGGCTAGC | 59.184 | 41.667 | 6.04 | 6.04 | 41.59 | 3.42 |
98 | 99 | 4.487714 | TGTATAAGTGCTTTGGCTAGCT | 57.512 | 40.909 | 15.72 | 0.00 | 41.76 | 3.32 |
99 | 100 | 4.843728 | TGTATAAGTGCTTTGGCTAGCTT | 58.156 | 39.130 | 15.72 | 0.47 | 41.76 | 3.74 |
100 | 101 | 4.635765 | TGTATAAGTGCTTTGGCTAGCTTG | 59.364 | 41.667 | 15.72 | 3.73 | 41.76 | 4.01 |
101 | 102 | 1.986882 | AAGTGCTTTGGCTAGCTTGT | 58.013 | 45.000 | 15.72 | 0.00 | 41.76 | 3.16 |
102 | 103 | 1.242076 | AGTGCTTTGGCTAGCTTGTG | 58.758 | 50.000 | 15.72 | 4.44 | 41.76 | 3.33 |
103 | 104 | 0.954452 | GTGCTTTGGCTAGCTTGTGT | 59.046 | 50.000 | 15.72 | 0.00 | 41.76 | 3.72 |
104 | 105 | 2.151202 | GTGCTTTGGCTAGCTTGTGTA | 58.849 | 47.619 | 15.72 | 0.04 | 41.76 | 2.90 |
105 | 106 | 2.749621 | GTGCTTTGGCTAGCTTGTGTAT | 59.250 | 45.455 | 15.72 | 0.00 | 41.76 | 2.29 |
106 | 107 | 3.009723 | TGCTTTGGCTAGCTTGTGTATC | 58.990 | 45.455 | 15.72 | 0.00 | 41.76 | 2.24 |
107 | 108 | 3.274288 | GCTTTGGCTAGCTTGTGTATCT | 58.726 | 45.455 | 15.72 | 0.00 | 38.15 | 1.98 |
108 | 109 | 4.081142 | TGCTTTGGCTAGCTTGTGTATCTA | 60.081 | 41.667 | 15.72 | 0.00 | 41.76 | 1.98 |
109 | 110 | 4.509600 | GCTTTGGCTAGCTTGTGTATCTAG | 59.490 | 45.833 | 15.72 | 0.00 | 38.15 | 2.43 |
113 | 114 | 4.329462 | GCTAGCTTGTGTATCTAGCCTT | 57.671 | 45.455 | 7.70 | 0.00 | 45.70 | 4.35 |
114 | 115 | 4.303282 | GCTAGCTTGTGTATCTAGCCTTC | 58.697 | 47.826 | 7.70 | 0.00 | 45.70 | 3.46 |
115 | 116 | 3.444703 | AGCTTGTGTATCTAGCCTTCG | 57.555 | 47.619 | 0.00 | 0.00 | 43.81 | 3.79 |
116 | 117 | 2.101582 | AGCTTGTGTATCTAGCCTTCGG | 59.898 | 50.000 | 0.00 | 0.00 | 43.81 | 4.30 |
117 | 118 | 2.803492 | GCTTGTGTATCTAGCCTTCGGG | 60.803 | 54.545 | 0.00 | 0.00 | 38.58 | 5.14 |
127 | 128 | 3.059982 | CCTTCGGGCTCTGTGTGA | 58.940 | 61.111 | 0.00 | 0.00 | 0.00 | 3.58 |
128 | 129 | 1.079543 | CCTTCGGGCTCTGTGTGAG | 60.080 | 63.158 | 0.00 | 0.00 | 45.33 | 3.51 |
139 | 140 | 4.999751 | CTCTGTGTGAGCCTTTTCTTAC | 57.000 | 45.455 | 0.00 | 0.00 | 35.84 | 2.34 |
140 | 141 | 4.636249 | CTCTGTGTGAGCCTTTTCTTACT | 58.364 | 43.478 | 0.00 | 0.00 | 35.84 | 2.24 |
141 | 142 | 5.036117 | TCTGTGTGAGCCTTTTCTTACTT | 57.964 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
142 | 143 | 5.437060 | TCTGTGTGAGCCTTTTCTTACTTT | 58.563 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
143 | 144 | 5.885912 | TCTGTGTGAGCCTTTTCTTACTTTT | 59.114 | 36.000 | 0.00 | 0.00 | 0.00 | 2.27 |
144 | 145 | 6.038271 | TCTGTGTGAGCCTTTTCTTACTTTTC | 59.962 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
145 | 146 | 5.885912 | TGTGTGAGCCTTTTCTTACTTTTCT | 59.114 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
146 | 147 | 6.377146 | TGTGTGAGCCTTTTCTTACTTTTCTT | 59.623 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
147 | 148 | 6.693113 | GTGTGAGCCTTTTCTTACTTTTCTTG | 59.307 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
148 | 149 | 6.377146 | TGTGAGCCTTTTCTTACTTTTCTTGT | 59.623 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
149 | 150 | 7.093945 | TGTGAGCCTTTTCTTACTTTTCTTGTT | 60.094 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
150 | 151 | 7.220875 | GTGAGCCTTTTCTTACTTTTCTTGTTG | 59.779 | 37.037 | 0.00 | 0.00 | 0.00 | 3.33 |
151 | 152 | 7.122055 | TGAGCCTTTTCTTACTTTTCTTGTTGA | 59.878 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
152 | 153 | 7.258441 | AGCCTTTTCTTACTTTTCTTGTTGAC | 58.742 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
153 | 154 | 7.033185 | GCCTTTTCTTACTTTTCTTGTTGACA | 58.967 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
154 | 155 | 7.544217 | GCCTTTTCTTACTTTTCTTGTTGACAA | 59.456 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
155 | 156 | 8.860128 | CCTTTTCTTACTTTTCTTGTTGACAAC | 58.140 | 33.333 | 11.54 | 11.54 | 0.00 | 3.32 |
156 | 157 | 8.751302 | TTTTCTTACTTTTCTTGTTGACAACC | 57.249 | 30.769 | 15.59 | 0.00 | 0.00 | 3.77 |
157 | 158 | 7.696992 | TTCTTACTTTTCTTGTTGACAACCT | 57.303 | 32.000 | 15.59 | 0.00 | 0.00 | 3.50 |
158 | 159 | 7.696992 | TCTTACTTTTCTTGTTGACAACCTT | 57.303 | 32.000 | 15.59 | 0.00 | 0.00 | 3.50 |
159 | 160 | 7.535139 | TCTTACTTTTCTTGTTGACAACCTTG | 58.465 | 34.615 | 15.59 | 6.01 | 0.00 | 3.61 |
160 | 161 | 5.975693 | ACTTTTCTTGTTGACAACCTTGA | 57.024 | 34.783 | 15.59 | 8.12 | 0.00 | 3.02 |
161 | 162 | 5.954335 | ACTTTTCTTGTTGACAACCTTGAG | 58.046 | 37.500 | 15.59 | 8.41 | 0.00 | 3.02 |
162 | 163 | 5.710099 | ACTTTTCTTGTTGACAACCTTGAGA | 59.290 | 36.000 | 15.59 | 10.37 | 0.00 | 3.27 |
163 | 164 | 5.560966 | TTTCTTGTTGACAACCTTGAGAC | 57.439 | 39.130 | 15.59 | 0.00 | 0.00 | 3.36 |
164 | 165 | 4.487714 | TCTTGTTGACAACCTTGAGACT | 57.512 | 40.909 | 15.59 | 0.00 | 0.00 | 3.24 |
165 | 166 | 4.843728 | TCTTGTTGACAACCTTGAGACTT | 58.156 | 39.130 | 15.59 | 0.00 | 0.00 | 3.01 |
166 | 167 | 4.635765 | TCTTGTTGACAACCTTGAGACTTG | 59.364 | 41.667 | 15.59 | 0.00 | 0.00 | 3.16 |
167 | 168 | 3.278574 | TGTTGACAACCTTGAGACTTGG | 58.721 | 45.455 | 15.59 | 0.00 | 0.00 | 3.61 |
168 | 169 | 3.054728 | TGTTGACAACCTTGAGACTTGGA | 60.055 | 43.478 | 15.59 | 0.00 | 0.00 | 3.53 |
169 | 170 | 3.475566 | TGACAACCTTGAGACTTGGAG | 57.524 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
170 | 171 | 3.038280 | TGACAACCTTGAGACTTGGAGA | 58.962 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
171 | 172 | 3.181465 | TGACAACCTTGAGACTTGGAGAC | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
172 | 173 | 3.041946 | ACAACCTTGAGACTTGGAGACT | 58.958 | 45.455 | 0.00 | 0.00 | 0.00 | 3.24 |
173 | 174 | 3.456277 | ACAACCTTGAGACTTGGAGACTT | 59.544 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
174 | 175 | 4.080299 | ACAACCTTGAGACTTGGAGACTTT | 60.080 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
175 | 176 | 4.078639 | ACCTTGAGACTTGGAGACTTTG | 57.921 | 45.455 | 0.00 | 0.00 | 0.00 | 2.77 |
176 | 177 | 3.456277 | ACCTTGAGACTTGGAGACTTTGT | 59.544 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
177 | 178 | 3.812053 | CCTTGAGACTTGGAGACTTTGTG | 59.188 | 47.826 | 0.00 | 0.00 | 0.00 | 3.33 |
178 | 179 | 3.475566 | TGAGACTTGGAGACTTTGTGG | 57.524 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
179 | 180 | 3.038280 | TGAGACTTGGAGACTTTGTGGA | 58.962 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
180 | 181 | 3.181465 | TGAGACTTGGAGACTTTGTGGAC | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
181 | 182 | 3.041946 | AGACTTGGAGACTTTGTGGACT | 58.958 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
182 | 183 | 4.223953 | AGACTTGGAGACTTTGTGGACTA | 58.776 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
183 | 184 | 4.841246 | AGACTTGGAGACTTTGTGGACTAT | 59.159 | 41.667 | 0.00 | 0.00 | 0.00 | 2.12 |
184 | 185 | 5.308237 | AGACTTGGAGACTTTGTGGACTATT | 59.692 | 40.000 | 0.00 | 0.00 | 0.00 | 1.73 |
185 | 186 | 5.941788 | ACTTGGAGACTTTGTGGACTATTT | 58.058 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
186 | 187 | 6.365520 | ACTTGGAGACTTTGTGGACTATTTT | 58.634 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
187 | 188 | 7.514721 | ACTTGGAGACTTTGTGGACTATTTTA | 58.485 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
188 | 189 | 8.164070 | ACTTGGAGACTTTGTGGACTATTTTAT | 58.836 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
189 | 190 | 7.921786 | TGGAGACTTTGTGGACTATTTTATG | 57.078 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
190 | 191 | 6.374333 | TGGAGACTTTGTGGACTATTTTATGC | 59.626 | 38.462 | 0.00 | 0.00 | 0.00 | 3.14 |
191 | 192 | 6.599638 | GGAGACTTTGTGGACTATTTTATGCT | 59.400 | 38.462 | 0.00 | 0.00 | 0.00 | 3.79 |
192 | 193 | 7.121315 | GGAGACTTTGTGGACTATTTTATGCTT | 59.879 | 37.037 | 0.00 | 0.00 | 0.00 | 3.91 |
193 | 194 | 9.162764 | GAGACTTTGTGGACTATTTTATGCTTA | 57.837 | 33.333 | 0.00 | 0.00 | 0.00 | 3.09 |
194 | 195 | 9.515226 | AGACTTTGTGGACTATTTTATGCTTAA | 57.485 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
205 | 206 | 8.730680 | ACTATTTTATGCTTAATAAGATGGCCG | 58.269 | 33.333 | 3.88 | 0.00 | 30.98 | 6.13 |
206 | 207 | 6.952773 | TTTTATGCTTAATAAGATGGCCGT | 57.047 | 33.333 | 0.00 | 0.00 | 32.30 | 5.68 |
207 | 208 | 8.630054 | ATTTTATGCTTAATAAGATGGCCGTA | 57.370 | 30.769 | 3.88 | 0.00 | 32.30 | 4.02 |
208 | 209 | 8.630054 | TTTTATGCTTAATAAGATGGCCGTAT | 57.370 | 30.769 | 3.88 | 0.00 | 32.30 | 3.06 |
209 | 210 | 7.609760 | TTATGCTTAATAAGATGGCCGTATG | 57.390 | 36.000 | 3.88 | 0.00 | 0.00 | 2.39 |
210 | 211 | 3.751175 | TGCTTAATAAGATGGCCGTATGC | 59.249 | 43.478 | 3.88 | 0.00 | 40.16 | 3.14 |
211 | 212 | 3.751175 | GCTTAATAAGATGGCCGTATGCA | 59.249 | 43.478 | 3.88 | 0.00 | 43.89 | 3.96 |
212 | 213 | 4.396166 | GCTTAATAAGATGGCCGTATGCAT | 59.604 | 41.667 | 3.79 | 3.79 | 43.89 | 3.96 |
213 | 214 | 5.447818 | GCTTAATAAGATGGCCGTATGCATC | 60.448 | 44.000 | 0.19 | 0.00 | 43.89 | 3.91 |
214 | 215 | 3.701205 | ATAAGATGGCCGTATGCATCA | 57.299 | 42.857 | 0.19 | 0.00 | 43.89 | 3.07 |
215 | 216 | 2.574006 | AAGATGGCCGTATGCATCAT | 57.426 | 45.000 | 0.19 | 0.00 | 43.89 | 2.45 |
216 | 217 | 1.817357 | AGATGGCCGTATGCATCATG | 58.183 | 50.000 | 0.19 | 0.00 | 43.89 | 3.07 |
217 | 218 | 0.169672 | GATGGCCGTATGCATCATGC | 59.830 | 55.000 | 0.19 | 1.35 | 45.29 | 4.06 |
218 | 219 | 0.251033 | ATGGCCGTATGCATCATGCT | 60.251 | 50.000 | 11.84 | 0.00 | 45.31 | 3.79 |
219 | 220 | 1.167781 | TGGCCGTATGCATCATGCTG | 61.168 | 55.000 | 11.84 | 0.00 | 45.31 | 4.41 |
220 | 221 | 0.886043 | GGCCGTATGCATCATGCTGA | 60.886 | 55.000 | 11.84 | 0.00 | 45.31 | 4.26 |
221 | 222 | 1.162698 | GCCGTATGCATCATGCTGAT | 58.837 | 50.000 | 11.84 | 0.00 | 45.31 | 2.90 |
232 | 233 | 4.478371 | TGCTGATGCAGAGGCCGG | 62.478 | 66.667 | 0.00 | 0.00 | 45.31 | 6.13 |
234 | 235 | 4.559063 | CTGATGCAGAGGCCGGGG | 62.559 | 72.222 | 2.18 | 0.00 | 40.13 | 5.73 |
236 | 237 | 3.797353 | GATGCAGAGGCCGGGGAA | 61.797 | 66.667 | 2.18 | 0.00 | 40.13 | 3.97 |
237 | 238 | 3.764160 | GATGCAGAGGCCGGGGAAG | 62.764 | 68.421 | 2.18 | 0.00 | 40.13 | 3.46 |
404 | 406 | 1.392407 | ACCCAGATTTGAATCCCCCA | 58.608 | 50.000 | 0.27 | 0.00 | 36.04 | 4.96 |
455 | 1393 | 2.173356 | TGGAAGAGGAATGAATGCGGAT | 59.827 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
511 | 1449 | 3.186702 | TCAGACATTCCACAACGTTCA | 57.813 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
545 | 1483 | 4.527509 | ATGTTTCACGACTGATCTCACT | 57.472 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
558 | 1496 | 6.571605 | ACTGATCTCACTGTGATAACATCTG | 58.428 | 40.000 | 11.45 | 14.58 | 0.00 | 2.90 |
675 | 1673 | 3.309954 | GTGAAGGTGACTGTTGAAGTGTC | 59.690 | 47.826 | 0.00 | 0.00 | 42.68 | 3.67 |
681 | 1679 | 3.361053 | GTGACTGTTGAAGTGTCGATACG | 59.639 | 47.826 | 6.66 | 0.00 | 40.07 | 3.06 |
786 | 1784 | 0.246086 | CTCAGAGGTGGACAGCTGAC | 59.754 | 60.000 | 23.35 | 15.15 | 39.57 | 3.51 |
812 | 1810 | 4.594970 | TCAACTCTTGACCACTTGGAAAA | 58.405 | 39.130 | 1.14 | 0.00 | 38.94 | 2.29 |
849 | 1847 | 2.095567 | CCAGAATTCCAAGAACACTGCG | 60.096 | 50.000 | 0.65 | 0.00 | 0.00 | 5.18 |
853 | 1851 | 4.452455 | AGAATTCCAAGAACACTGCGTTAG | 59.548 | 41.667 | 0.65 | 0.00 | 38.19 | 2.34 |
855 | 1853 | 3.462483 | TCCAAGAACACTGCGTTAGAA | 57.538 | 42.857 | 0.00 | 0.00 | 38.19 | 2.10 |
865 | 1863 | 5.237815 | ACACTGCGTTAGAAAATCATCTGA | 58.762 | 37.500 | 0.00 | 0.00 | 0.00 | 3.27 |
886 | 1884 | 0.996462 | TCCGCGATCAAACATTCGTC | 59.004 | 50.000 | 8.23 | 0.00 | 37.66 | 4.20 |
1020 | 2042 | 2.586792 | GATTGGCCGGCTCTCACT | 59.413 | 61.111 | 28.56 | 10.28 | 0.00 | 3.41 |
1021 | 2043 | 1.522580 | GATTGGCCGGCTCTCACTC | 60.523 | 63.158 | 28.56 | 15.54 | 0.00 | 3.51 |
1022 | 2044 | 1.965754 | GATTGGCCGGCTCTCACTCT | 61.966 | 60.000 | 28.56 | 3.12 | 0.00 | 3.24 |
1023 | 2045 | 1.965754 | ATTGGCCGGCTCTCACTCTC | 61.966 | 60.000 | 28.56 | 6.48 | 0.00 | 3.20 |
1024 | 2046 | 3.071206 | GGCCGGCTCTCACTCTCA | 61.071 | 66.667 | 28.56 | 0.00 | 0.00 | 3.27 |
1025 | 2047 | 2.183046 | GCCGGCTCTCACTCTCAC | 59.817 | 66.667 | 22.15 | 0.00 | 0.00 | 3.51 |
1068 | 2093 | 4.607239 | TCCTTATCTTCCTACCGTTGAGT | 58.393 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
1195 | 2220 | 0.260816 | TCCGACCAGCCTGTACCTAT | 59.739 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1288 | 2313 | 0.393077 | CACTTCCTCTCCACCAACGT | 59.607 | 55.000 | 0.00 | 0.00 | 0.00 | 3.99 |
1322 | 2347 | 6.183361 | ACCAACAACTCTAATCTGGTTCTCTT | 60.183 | 38.462 | 0.00 | 0.00 | 33.37 | 2.85 |
1342 | 2367 | 1.152963 | GATGGTAATGGTGGCCGCT | 60.153 | 57.895 | 17.49 | 0.00 | 0.00 | 5.52 |
1469 | 2494 | 0.957395 | ATGTTGTGGCAGAGCTTCGG | 60.957 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1515 | 2540 | 3.876914 | CTGGCATGAAGCTACGGATAAAA | 59.123 | 43.478 | 0.00 | 0.00 | 44.79 | 1.52 |
1617 | 2647 | 1.006758 | AGTGACCCGAACAGATCCCTA | 59.993 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
2044 | 7121 | 1.028868 | GTGGACTGCAGGCAGATTCC | 61.029 | 60.000 | 26.63 | 22.24 | 46.30 | 3.01 |
2088 | 7168 | 4.794439 | CCGCGATGCAGTGACGGA | 62.794 | 66.667 | 8.23 | 0.00 | 46.71 | 4.69 |
2170 | 7250 | 0.240145 | TACGTTCGAGGAGTGCACAG | 59.760 | 55.000 | 21.04 | 4.83 | 0.00 | 3.66 |
2171 | 7251 | 2.375766 | CGTTCGAGGAGTGCACAGC | 61.376 | 63.158 | 21.04 | 10.48 | 0.00 | 4.40 |
2172 | 7252 | 1.300931 | GTTCGAGGAGTGCACAGCA | 60.301 | 57.895 | 21.04 | 0.00 | 35.60 | 4.41 |
2173 | 7253 | 1.005748 | TTCGAGGAGTGCACAGCAG | 60.006 | 57.895 | 21.04 | 6.32 | 40.08 | 4.24 |
2174 | 7254 | 1.463553 | TTCGAGGAGTGCACAGCAGA | 61.464 | 55.000 | 21.04 | 8.70 | 40.08 | 4.26 |
2175 | 7255 | 1.445754 | CGAGGAGTGCACAGCAGAG | 60.446 | 63.158 | 21.04 | 1.61 | 40.08 | 3.35 |
2176 | 7256 | 1.670590 | GAGGAGTGCACAGCAGAGT | 59.329 | 57.895 | 21.04 | 0.00 | 40.08 | 3.24 |
2257 | 7340 | 1.884444 | GTCTGGAGGAGACGTGACC | 59.116 | 63.158 | 0.00 | 0.00 | 41.91 | 4.02 |
2458 | 7901 | 5.694231 | TCATCCATTTTTGTGACAGTCAG | 57.306 | 39.130 | 2.53 | 0.00 | 0.00 | 3.51 |
2459 | 7902 | 5.132502 | TCATCCATTTTTGTGACAGTCAGT | 58.867 | 37.500 | 2.53 | 0.00 | 0.00 | 3.41 |
2460 | 7903 | 5.593909 | TCATCCATTTTTGTGACAGTCAGTT | 59.406 | 36.000 | 2.53 | 0.00 | 0.00 | 3.16 |
2461 | 7904 | 6.770303 | TCATCCATTTTTGTGACAGTCAGTTA | 59.230 | 34.615 | 2.53 | 0.00 | 0.00 | 2.24 |
2532 | 7980 | 9.793259 | AGTTCCACAATCTGATCTTTAAGTTAA | 57.207 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
2585 | 8044 | 4.178545 | TGCTCTCAAAATAGGCTTTTGC | 57.821 | 40.909 | 6.76 | 0.00 | 46.64 | 3.68 |
2681 | 8140 | 7.556275 | ACAAAGAGAAAAACAGTGAGGATTGTA | 59.444 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
2688 | 8147 | 4.032960 | ACAGTGAGGATTGTATTGCCAA | 57.967 | 40.909 | 0.00 | 0.00 | 0.00 | 4.52 |
2721 | 8180 | 2.094494 | AGTGTTCTGGTACTCATCTGCG | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 5.18 |
2777 | 8236 | 4.281898 | TCCTTGACCCTGCTAAGTAAAC | 57.718 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
2818 | 8280 | 6.469915 | GCGGGGAAAGTAAAACGTTATATTTG | 59.530 | 38.462 | 0.00 | 0.00 | 0.00 | 2.32 |
2823 | 8285 | 9.333497 | GGAAAGTAAAACGTTATATTTGACCAC | 57.667 | 33.333 | 0.00 | 0.00 | 0.00 | 4.16 |
2824 | 8286 | 9.333497 | GAAAGTAAAACGTTATATTTGACCACC | 57.667 | 33.333 | 0.00 | 0.00 | 0.00 | 4.61 |
2825 | 8287 | 8.625786 | AAGTAAAACGTTATATTTGACCACCT | 57.374 | 30.769 | 0.00 | 0.00 | 0.00 | 4.00 |
2826 | 8288 | 8.625786 | AGTAAAACGTTATATTTGACCACCTT | 57.374 | 30.769 | 0.00 | 0.00 | 0.00 | 3.50 |
2827 | 8289 | 9.723601 | AGTAAAACGTTATATTTGACCACCTTA | 57.276 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
2841 | 8303 | 4.138487 | CCACCTTATGGGAGTGTAAGTC | 57.862 | 50.000 | 0.00 | 0.00 | 45.95 | 3.01 |
2842 | 8304 | 3.775316 | CCACCTTATGGGAGTGTAAGTCT | 59.225 | 47.826 | 0.00 | 0.00 | 45.95 | 3.24 |
2843 | 8305 | 4.141914 | CCACCTTATGGGAGTGTAAGTCTC | 60.142 | 50.000 | 0.00 | 0.00 | 45.95 | 3.36 |
2847 | 8309 | 2.391926 | TGGGAGTGTAAGTCTCACCA | 57.608 | 50.000 | 0.00 | 0.00 | 43.19 | 4.17 |
2848 | 8310 | 1.968493 | TGGGAGTGTAAGTCTCACCAC | 59.032 | 52.381 | 0.00 | 0.00 | 43.19 | 4.16 |
2849 | 8311 | 1.275573 | GGGAGTGTAAGTCTCACCACC | 59.724 | 57.143 | 0.00 | 0.00 | 36.53 | 4.61 |
2850 | 8312 | 1.968493 | GGAGTGTAAGTCTCACCACCA | 59.032 | 52.381 | 0.00 | 0.00 | 36.25 | 4.17 |
2851 | 8313 | 2.367567 | GGAGTGTAAGTCTCACCACCAA | 59.632 | 50.000 | 0.00 | 0.00 | 36.25 | 3.67 |
2852 | 8314 | 3.181458 | GGAGTGTAAGTCTCACCACCAAA | 60.181 | 47.826 | 0.00 | 0.00 | 36.25 | 3.28 |
2853 | 8315 | 4.448210 | GAGTGTAAGTCTCACCACCAAAA | 58.552 | 43.478 | 0.00 | 0.00 | 36.58 | 2.44 |
2854 | 8316 | 4.196971 | AGTGTAAGTCTCACCACCAAAAC | 58.803 | 43.478 | 0.00 | 0.00 | 36.58 | 2.43 |
2855 | 8317 | 4.080526 | AGTGTAAGTCTCACCACCAAAACT | 60.081 | 41.667 | 0.00 | 0.00 | 36.58 | 2.66 |
2856 | 8318 | 4.638865 | GTGTAAGTCTCACCACCAAAACTT | 59.361 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
2857 | 8319 | 4.638421 | TGTAAGTCTCACCACCAAAACTTG | 59.362 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
2870 | 8332 | 4.247267 | CAAAACTTGGACTGCATCATGT | 57.753 | 40.909 | 0.00 | 0.00 | 0.00 | 3.21 |
2871 | 8333 | 5.375417 | CAAAACTTGGACTGCATCATGTA | 57.625 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
2872 | 8334 | 5.156355 | CAAAACTTGGACTGCATCATGTAC | 58.844 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
2873 | 8335 | 3.988976 | ACTTGGACTGCATCATGTACT | 57.011 | 42.857 | 0.00 | 0.00 | 0.00 | 2.73 |
2874 | 8336 | 5.420725 | AACTTGGACTGCATCATGTACTA | 57.579 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
2875 | 8337 | 4.759782 | ACTTGGACTGCATCATGTACTAC | 58.240 | 43.478 | 0.00 | 0.00 | 0.00 | 2.73 |
2876 | 8338 | 3.819564 | TGGACTGCATCATGTACTACC | 57.180 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
2877 | 8339 | 3.103742 | TGGACTGCATCATGTACTACCA | 58.896 | 45.455 | 0.00 | 0.00 | 0.00 | 3.25 |
2878 | 8340 | 3.711190 | TGGACTGCATCATGTACTACCAT | 59.289 | 43.478 | 0.00 | 0.00 | 0.00 | 3.55 |
2879 | 8341 | 4.898861 | TGGACTGCATCATGTACTACCATA | 59.101 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
2880 | 8342 | 5.365314 | TGGACTGCATCATGTACTACCATAA | 59.635 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
2881 | 8343 | 6.043127 | TGGACTGCATCATGTACTACCATAAT | 59.957 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
2882 | 8344 | 7.234577 | TGGACTGCATCATGTACTACCATAATA | 59.765 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
2883 | 8345 | 8.094548 | GGACTGCATCATGTACTACCATAATAA | 58.905 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
2884 | 8346 | 9.658799 | GACTGCATCATGTACTACCATAATAAT | 57.341 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
2900 | 8362 | 8.720537 | ACCATAATAATAATATACCCTTCCCCG | 58.279 | 37.037 | 0.00 | 0.00 | 0.00 | 5.73 |
2901 | 8363 | 7.664318 | CCATAATAATAATATACCCTTCCCCGC | 59.336 | 40.741 | 0.00 | 0.00 | 0.00 | 6.13 |
2902 | 8364 | 6.645884 | AATAATAATATACCCTTCCCCGCA | 57.354 | 37.500 | 0.00 | 0.00 | 0.00 | 5.69 |
2903 | 8365 | 6.645884 | ATAATAATATACCCTTCCCCGCAA | 57.354 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
2904 | 8366 | 5.327737 | AATAATATACCCTTCCCCGCAAA | 57.672 | 39.130 | 0.00 | 0.00 | 0.00 | 3.68 |
2905 | 8367 | 3.673543 | AATATACCCTTCCCCGCAAAA | 57.326 | 42.857 | 0.00 | 0.00 | 0.00 | 2.44 |
2906 | 8368 | 3.673543 | ATATACCCTTCCCCGCAAAAA | 57.326 | 42.857 | 0.00 | 0.00 | 0.00 | 1.94 |
2907 | 8369 | 2.543037 | ATACCCTTCCCCGCAAAAAT | 57.457 | 45.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2908 | 8370 | 3.673543 | ATACCCTTCCCCGCAAAAATA | 57.326 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
2909 | 8371 | 2.312424 | ACCCTTCCCCGCAAAAATAA | 57.688 | 45.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2910 | 8372 | 2.827755 | ACCCTTCCCCGCAAAAATAAT | 58.172 | 42.857 | 0.00 | 0.00 | 0.00 | 1.28 |
2911 | 8373 | 3.983821 | ACCCTTCCCCGCAAAAATAATA | 58.016 | 40.909 | 0.00 | 0.00 | 0.00 | 0.98 |
2912 | 8374 | 4.354662 | ACCCTTCCCCGCAAAAATAATAA | 58.645 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
2913 | 8375 | 4.966168 | ACCCTTCCCCGCAAAAATAATAAT | 59.034 | 37.500 | 0.00 | 0.00 | 0.00 | 1.28 |
2914 | 8376 | 6.137559 | ACCCTTCCCCGCAAAAATAATAATA | 58.862 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2915 | 8377 | 6.612049 | ACCCTTCCCCGCAAAAATAATAATAA | 59.388 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
2916 | 8378 | 7.291416 | ACCCTTCCCCGCAAAAATAATAATAAT | 59.709 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
2917 | 8379 | 8.808092 | CCCTTCCCCGCAAAAATAATAATAATA | 58.192 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
2960 | 8422 | 7.698163 | ACAGAATCTTATAAATCCCCTGAGT | 57.302 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2961 | 8423 | 8.798975 | ACAGAATCTTATAAATCCCCTGAGTA | 57.201 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
2962 | 8424 | 9.398921 | ACAGAATCTTATAAATCCCCTGAGTAT | 57.601 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
2974 | 8436 | 7.850935 | ATCCCCTGAGTATATAAAACGAGAA | 57.149 | 36.000 | 0.00 | 0.00 | 0.00 | 2.87 |
2978 | 8440 | 7.767198 | CCCCTGAGTATATAAAACGAGAACAAA | 59.233 | 37.037 | 0.00 | 0.00 | 0.00 | 2.83 |
2994 | 8456 | 7.064728 | ACGAGAACAAATAACTTCTTAGATGGC | 59.935 | 37.037 | 0.00 | 0.00 | 0.00 | 4.40 |
3015 | 8477 | 9.930693 | GATGGCTTATAGCATAGTTTAACTACT | 57.069 | 33.333 | 7.00 | 3.99 | 44.75 | 2.57 |
3034 | 8496 | 3.538634 | CTCTGAGGAGTGATGCAATGA | 57.461 | 47.619 | 0.00 | 0.00 | 35.03 | 2.57 |
3036 | 8498 | 5.211174 | CTCTGAGGAGTGATGCAATGATA | 57.789 | 43.478 | 0.00 | 0.00 | 35.03 | 2.15 |
3043 | 8505 | 4.085055 | GGAGTGATGCAATGATAACGTACG | 60.085 | 45.833 | 15.01 | 15.01 | 0.00 | 3.67 |
3049 | 8514 | 6.801862 | TGATGCAATGATAACGTACGATCTAG | 59.198 | 38.462 | 24.41 | 10.09 | 0.00 | 2.43 |
3070 | 8535 | 7.363031 | TCTAGTACCAAATAAGATGGAGTCCT | 58.637 | 38.462 | 11.33 | 0.00 | 40.56 | 3.85 |
3079 | 8544 | 7.921041 | AATAAGATGGAGTCCTCATGTTAGA | 57.079 | 36.000 | 11.33 | 0.00 | 35.05 | 2.10 |
3091 | 8556 | 6.535508 | GTCCTCATGTTAGAGAAACCACATAC | 59.464 | 42.308 | 0.00 | 0.00 | 37.87 | 2.39 |
3094 | 8559 | 7.278868 | CCTCATGTTAGAGAAACCACATACTTC | 59.721 | 40.741 | 0.00 | 0.00 | 37.87 | 3.01 |
3103 | 8568 | 1.115467 | CCACATACTTCTCTCGCCCT | 58.885 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
3107 | 8572 | 4.302455 | CACATACTTCTCTCGCCCTATTG | 58.698 | 47.826 | 0.00 | 0.00 | 0.00 | 1.90 |
3114 | 8579 | 0.750249 | TCTCGCCCTATTGCAATCGA | 59.250 | 50.000 | 16.86 | 16.92 | 0.00 | 3.59 |
3127 | 8592 | 1.254570 | GCAATCGATCGTTCGTACACC | 59.745 | 52.381 | 15.94 | 0.00 | 45.65 | 4.16 |
3135 | 8600 | 1.680105 | CGTTCGTACACCATGTCCGC | 61.680 | 60.000 | 0.00 | 0.00 | 29.48 | 5.54 |
3140 | 8605 | 0.460284 | GTACACCATGTCCGCCAGAG | 60.460 | 60.000 | 0.00 | 0.00 | 0.00 | 3.35 |
3150 | 8615 | 4.711949 | CGCCAGAGCCCTTGCACT | 62.712 | 66.667 | 0.00 | 0.00 | 39.12 | 4.40 |
3151 | 8616 | 2.282745 | GCCAGAGCCCTTGCACTT | 60.283 | 61.111 | 0.00 | 0.00 | 36.17 | 3.16 |
3152 | 8617 | 1.905354 | GCCAGAGCCCTTGCACTTT | 60.905 | 57.895 | 0.00 | 0.00 | 36.17 | 2.66 |
3153 | 8618 | 1.962144 | CCAGAGCCCTTGCACTTTG | 59.038 | 57.895 | 0.00 | 0.00 | 36.17 | 2.77 |
3154 | 8619 | 0.825010 | CCAGAGCCCTTGCACTTTGT | 60.825 | 55.000 | 0.00 | 0.00 | 36.17 | 2.83 |
3156 | 8621 | 0.106519 | AGAGCCCTTGCACTTTGTGT | 60.107 | 50.000 | 0.00 | 0.00 | 41.13 | 3.72 |
3166 | 8631 | 2.987413 | CACTTTGTGTGTGTGTGTGT | 57.013 | 45.000 | 0.00 | 0.00 | 41.53 | 3.72 |
3167 | 8632 | 2.583739 | CACTTTGTGTGTGTGTGTGTG | 58.416 | 47.619 | 0.00 | 0.00 | 41.53 | 3.82 |
3168 | 8633 | 1.068610 | ACTTTGTGTGTGTGTGTGTGC | 60.069 | 47.619 | 0.00 | 0.00 | 0.00 | 4.57 |
3169 | 8634 | 0.110010 | TTTGTGTGTGTGTGTGTGCG | 60.110 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
3170 | 8635 | 2.277247 | GTGTGTGTGTGTGTGCGC | 60.277 | 61.111 | 0.00 | 0.00 | 0.00 | 6.09 |
3171 | 8636 | 3.858989 | TGTGTGTGTGTGTGCGCG | 61.859 | 61.111 | 0.00 | 0.00 | 0.00 | 6.86 |
3222 | 8687 | 1.985159 | TCATAGGGGTTGCTGTCTTGT | 59.015 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
3224 | 8689 | 3.157087 | CATAGGGGTTGCTGTCTTGTTT | 58.843 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
3239 | 8704 | 7.487189 | GCTGTCTTGTTTCTTTCCATATCATTG | 59.513 | 37.037 | 0.00 | 0.00 | 0.00 | 2.82 |
3261 | 8726 | 1.323412 | ATCGCTGCTCGGAGATACTT | 58.677 | 50.000 | 9.69 | 0.00 | 39.05 | 2.24 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 3.814268 | CGCCATCCAAACCGGCTG | 61.814 | 66.667 | 0.00 | 0.00 | 43.95 | 4.85 |
3 | 4 | 3.131478 | GACCGCCATCCAAACCGG | 61.131 | 66.667 | 0.00 | 0.00 | 45.80 | 5.28 |
4 | 5 | 3.496131 | CGACCGCCATCCAAACCG | 61.496 | 66.667 | 0.00 | 0.00 | 0.00 | 4.44 |
5 | 6 | 2.359478 | ACGACCGCCATCCAAACC | 60.359 | 61.111 | 0.00 | 0.00 | 0.00 | 3.27 |
6 | 7 | 0.671163 | TACACGACCGCCATCCAAAC | 60.671 | 55.000 | 0.00 | 0.00 | 0.00 | 2.93 |
7 | 8 | 0.035036 | TTACACGACCGCCATCCAAA | 59.965 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
8 | 9 | 0.671163 | GTTACACGACCGCCATCCAA | 60.671 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
9 | 10 | 1.079681 | GTTACACGACCGCCATCCA | 60.080 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
10 | 11 | 1.079681 | TGTTACACGACCGCCATCC | 60.080 | 57.895 | 0.00 | 0.00 | 0.00 | 3.51 |
11 | 12 | 1.082117 | CCTGTTACACGACCGCCATC | 61.082 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
12 | 13 | 1.079405 | CCTGTTACACGACCGCCAT | 60.079 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
13 | 14 | 1.537814 | ATCCTGTTACACGACCGCCA | 61.538 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
14 | 15 | 0.457035 | TATCCTGTTACACGACCGCC | 59.543 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
15 | 16 | 1.535437 | CCTATCCTGTTACACGACCGC | 60.535 | 57.143 | 0.00 | 0.00 | 0.00 | 5.68 |
16 | 17 | 1.535437 | GCCTATCCTGTTACACGACCG | 60.535 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
17 | 18 | 1.479323 | TGCCTATCCTGTTACACGACC | 59.521 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
18 | 19 | 2.953466 | TGCCTATCCTGTTACACGAC | 57.047 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
19 | 20 | 4.481368 | AATTGCCTATCCTGTTACACGA | 57.519 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
20 | 21 | 5.357257 | ACTAATTGCCTATCCTGTTACACG | 58.643 | 41.667 | 0.00 | 0.00 | 0.00 | 4.49 |
21 | 22 | 7.625828 | AAACTAATTGCCTATCCTGTTACAC | 57.374 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
22 | 23 | 7.771826 | GGTAAACTAATTGCCTATCCTGTTACA | 59.228 | 37.037 | 0.00 | 0.00 | 40.38 | 2.41 |
23 | 24 | 8.151141 | GGTAAACTAATTGCCTATCCTGTTAC | 57.849 | 38.462 | 0.00 | 0.00 | 40.38 | 2.50 |
34 | 35 | 7.973944 | CCAAAATAGACAGGTAAACTAATTGCC | 59.026 | 37.037 | 0.00 | 0.00 | 43.60 | 4.52 |
35 | 36 | 8.736244 | TCCAAAATAGACAGGTAAACTAATTGC | 58.264 | 33.333 | 0.00 | 0.00 | 0.00 | 3.56 |
37 | 38 | 8.957466 | GCTCCAAAATAGACAGGTAAACTAATT | 58.043 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
38 | 39 | 7.556635 | GGCTCCAAAATAGACAGGTAAACTAAT | 59.443 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
39 | 40 | 6.882678 | GGCTCCAAAATAGACAGGTAAACTAA | 59.117 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
40 | 41 | 6.013206 | TGGCTCCAAAATAGACAGGTAAACTA | 60.013 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
41 | 42 | 5.222048 | TGGCTCCAAAATAGACAGGTAAACT | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 2.66 |
42 | 43 | 5.007682 | TGGCTCCAAAATAGACAGGTAAAC | 58.992 | 41.667 | 0.00 | 0.00 | 0.00 | 2.01 |
43 | 44 | 5.249780 | TGGCTCCAAAATAGACAGGTAAA | 57.750 | 39.130 | 0.00 | 0.00 | 0.00 | 2.01 |
44 | 45 | 4.919774 | TGGCTCCAAAATAGACAGGTAA | 57.080 | 40.909 | 0.00 | 0.00 | 0.00 | 2.85 |
45 | 46 | 4.919774 | TTGGCTCCAAAATAGACAGGTA | 57.080 | 40.909 | 0.00 | 0.00 | 32.36 | 3.08 |
46 | 47 | 3.806949 | TTGGCTCCAAAATAGACAGGT | 57.193 | 42.857 | 0.00 | 0.00 | 32.36 | 4.00 |
47 | 48 | 3.119849 | CGTTTGGCTCCAAAATAGACAGG | 60.120 | 47.826 | 14.97 | 0.00 | 45.86 | 4.00 |
48 | 49 | 3.119849 | CCGTTTGGCTCCAAAATAGACAG | 60.120 | 47.826 | 14.97 | 1.92 | 45.86 | 3.51 |
49 | 50 | 2.817258 | CCGTTTGGCTCCAAAATAGACA | 59.183 | 45.455 | 14.97 | 0.00 | 45.86 | 3.41 |
50 | 51 | 3.487563 | CCGTTTGGCTCCAAAATAGAC | 57.512 | 47.619 | 14.97 | 3.42 | 45.86 | 2.59 |
63 | 64 | 3.938963 | ACTTATACATCACAGCCGTTTGG | 59.061 | 43.478 | 0.00 | 0.00 | 38.77 | 3.28 |
64 | 65 | 4.727734 | GCACTTATACATCACAGCCGTTTG | 60.728 | 45.833 | 0.00 | 0.00 | 0.00 | 2.93 |
65 | 66 | 3.374058 | GCACTTATACATCACAGCCGTTT | 59.626 | 43.478 | 0.00 | 0.00 | 0.00 | 3.60 |
66 | 67 | 2.936498 | GCACTTATACATCACAGCCGTT | 59.064 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
67 | 68 | 2.168521 | AGCACTTATACATCACAGCCGT | 59.831 | 45.455 | 0.00 | 0.00 | 0.00 | 5.68 |
68 | 69 | 2.826428 | AGCACTTATACATCACAGCCG | 58.174 | 47.619 | 0.00 | 0.00 | 0.00 | 5.52 |
69 | 70 | 4.201950 | CCAAAGCACTTATACATCACAGCC | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 4.85 |
70 | 71 | 4.731773 | GCCAAAGCACTTATACATCACAGC | 60.732 | 45.833 | 0.00 | 0.00 | 39.53 | 4.40 |
71 | 72 | 4.637534 | AGCCAAAGCACTTATACATCACAG | 59.362 | 41.667 | 0.00 | 0.00 | 43.56 | 3.66 |
72 | 73 | 4.588899 | AGCCAAAGCACTTATACATCACA | 58.411 | 39.130 | 0.00 | 0.00 | 43.56 | 3.58 |
73 | 74 | 5.277538 | GCTAGCCAAAGCACTTATACATCAC | 60.278 | 44.000 | 2.29 | 0.00 | 43.56 | 3.06 |
74 | 75 | 4.816385 | GCTAGCCAAAGCACTTATACATCA | 59.184 | 41.667 | 2.29 | 0.00 | 43.56 | 3.07 |
75 | 76 | 5.059833 | AGCTAGCCAAAGCACTTATACATC | 58.940 | 41.667 | 12.13 | 0.00 | 45.30 | 3.06 |
76 | 77 | 5.041191 | AGCTAGCCAAAGCACTTATACAT | 57.959 | 39.130 | 12.13 | 0.00 | 45.30 | 2.29 |
77 | 78 | 4.487714 | AGCTAGCCAAAGCACTTATACA | 57.512 | 40.909 | 12.13 | 0.00 | 45.30 | 2.29 |
78 | 79 | 4.636206 | ACAAGCTAGCCAAAGCACTTATAC | 59.364 | 41.667 | 12.13 | 0.00 | 45.30 | 1.47 |
79 | 80 | 4.635765 | CACAAGCTAGCCAAAGCACTTATA | 59.364 | 41.667 | 12.13 | 0.00 | 45.30 | 0.98 |
80 | 81 | 3.441572 | CACAAGCTAGCCAAAGCACTTAT | 59.558 | 43.478 | 12.13 | 0.00 | 45.30 | 1.73 |
81 | 82 | 2.813754 | CACAAGCTAGCCAAAGCACTTA | 59.186 | 45.455 | 12.13 | 0.00 | 45.30 | 2.24 |
82 | 83 | 1.610522 | CACAAGCTAGCCAAAGCACTT | 59.389 | 47.619 | 12.13 | 0.00 | 45.30 | 3.16 |
83 | 84 | 1.242076 | CACAAGCTAGCCAAAGCACT | 58.758 | 50.000 | 12.13 | 0.00 | 45.30 | 4.40 |
84 | 85 | 0.954452 | ACACAAGCTAGCCAAAGCAC | 59.046 | 50.000 | 12.13 | 0.00 | 45.30 | 4.40 |
85 | 86 | 2.559698 | TACACAAGCTAGCCAAAGCA | 57.440 | 45.000 | 12.13 | 0.00 | 45.30 | 3.91 |
86 | 87 | 3.274288 | AGATACACAAGCTAGCCAAAGC | 58.726 | 45.455 | 12.13 | 0.00 | 43.11 | 3.51 |
93 | 94 | 4.541779 | CGAAGGCTAGATACACAAGCTAG | 58.458 | 47.826 | 0.00 | 0.00 | 36.48 | 3.42 |
94 | 95 | 3.318275 | CCGAAGGCTAGATACACAAGCTA | 59.682 | 47.826 | 0.00 | 0.00 | 46.14 | 3.32 |
95 | 96 | 2.101582 | CCGAAGGCTAGATACACAAGCT | 59.898 | 50.000 | 0.00 | 0.00 | 46.14 | 3.74 |
96 | 97 | 2.474816 | CCGAAGGCTAGATACACAAGC | 58.525 | 52.381 | 0.00 | 0.00 | 46.14 | 4.01 |
110 | 111 | 1.079543 | CTCACACAGAGCCCGAAGG | 60.080 | 63.158 | 0.00 | 0.00 | 41.40 | 3.46 |
111 | 112 | 4.586618 | CTCACACAGAGCCCGAAG | 57.413 | 61.111 | 0.00 | 0.00 | 37.59 | 3.79 |
119 | 120 | 4.689612 | AGTAAGAAAAGGCTCACACAGA | 57.310 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
120 | 121 | 5.757850 | AAAGTAAGAAAAGGCTCACACAG | 57.242 | 39.130 | 0.00 | 0.00 | 0.00 | 3.66 |
121 | 122 | 5.885912 | AGAAAAGTAAGAAAAGGCTCACACA | 59.114 | 36.000 | 0.00 | 0.00 | 0.00 | 3.72 |
122 | 123 | 6.378710 | AGAAAAGTAAGAAAAGGCTCACAC | 57.621 | 37.500 | 0.00 | 0.00 | 0.00 | 3.82 |
123 | 124 | 6.377146 | ACAAGAAAAGTAAGAAAAGGCTCACA | 59.623 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
124 | 125 | 6.796426 | ACAAGAAAAGTAAGAAAAGGCTCAC | 58.204 | 36.000 | 0.00 | 0.00 | 0.00 | 3.51 |
125 | 126 | 7.122055 | TCAACAAGAAAAGTAAGAAAAGGCTCA | 59.878 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
126 | 127 | 7.432545 | GTCAACAAGAAAAGTAAGAAAAGGCTC | 59.567 | 37.037 | 0.00 | 0.00 | 0.00 | 4.70 |
127 | 128 | 7.093945 | TGTCAACAAGAAAAGTAAGAAAAGGCT | 60.094 | 33.333 | 0.00 | 0.00 | 0.00 | 4.58 |
128 | 129 | 7.033185 | TGTCAACAAGAAAAGTAAGAAAAGGC | 58.967 | 34.615 | 0.00 | 0.00 | 0.00 | 4.35 |
129 | 130 | 8.860128 | GTTGTCAACAAGAAAAGTAAGAAAAGG | 58.140 | 33.333 | 10.93 | 0.00 | 36.39 | 3.11 |
130 | 131 | 8.860128 | GGTTGTCAACAAGAAAAGTAAGAAAAG | 58.140 | 33.333 | 17.29 | 0.00 | 36.39 | 2.27 |
131 | 132 | 8.581578 | AGGTTGTCAACAAGAAAAGTAAGAAAA | 58.418 | 29.630 | 17.29 | 0.00 | 36.39 | 2.29 |
132 | 133 | 8.117813 | AGGTTGTCAACAAGAAAAGTAAGAAA | 57.882 | 30.769 | 17.29 | 0.00 | 36.39 | 2.52 |
133 | 134 | 7.696992 | AGGTTGTCAACAAGAAAAGTAAGAA | 57.303 | 32.000 | 17.29 | 0.00 | 36.39 | 2.52 |
134 | 135 | 7.392113 | TCAAGGTTGTCAACAAGAAAAGTAAGA | 59.608 | 33.333 | 17.29 | 0.00 | 36.39 | 2.10 |
135 | 136 | 7.535139 | TCAAGGTTGTCAACAAGAAAAGTAAG | 58.465 | 34.615 | 17.29 | 0.00 | 36.39 | 2.34 |
136 | 137 | 7.392113 | TCTCAAGGTTGTCAACAAGAAAAGTAA | 59.608 | 33.333 | 17.29 | 0.00 | 36.39 | 2.24 |
137 | 138 | 6.882140 | TCTCAAGGTTGTCAACAAGAAAAGTA | 59.118 | 34.615 | 17.29 | 0.00 | 36.39 | 2.24 |
138 | 139 | 5.710099 | TCTCAAGGTTGTCAACAAGAAAAGT | 59.290 | 36.000 | 17.29 | 0.00 | 36.39 | 2.66 |
139 | 140 | 6.030228 | GTCTCAAGGTTGTCAACAAGAAAAG | 58.970 | 40.000 | 17.29 | 6.83 | 36.39 | 2.27 |
140 | 141 | 5.710099 | AGTCTCAAGGTTGTCAACAAGAAAA | 59.290 | 36.000 | 17.29 | 1.38 | 36.39 | 2.29 |
141 | 142 | 5.253330 | AGTCTCAAGGTTGTCAACAAGAAA | 58.747 | 37.500 | 17.29 | 0.00 | 36.39 | 2.52 |
142 | 143 | 4.843728 | AGTCTCAAGGTTGTCAACAAGAA | 58.156 | 39.130 | 17.29 | 0.00 | 36.39 | 2.52 |
143 | 144 | 4.487714 | AGTCTCAAGGTTGTCAACAAGA | 57.512 | 40.909 | 17.29 | 10.62 | 36.39 | 3.02 |
144 | 145 | 4.201950 | CCAAGTCTCAAGGTTGTCAACAAG | 60.202 | 45.833 | 17.29 | 8.69 | 36.39 | 3.16 |
145 | 146 | 3.694072 | CCAAGTCTCAAGGTTGTCAACAA | 59.306 | 43.478 | 17.29 | 0.00 | 0.00 | 2.83 |
146 | 147 | 3.054728 | TCCAAGTCTCAAGGTTGTCAACA | 60.055 | 43.478 | 17.29 | 0.00 | 0.00 | 3.33 |
147 | 148 | 3.541632 | TCCAAGTCTCAAGGTTGTCAAC | 58.458 | 45.455 | 7.20 | 7.20 | 0.00 | 3.18 |
148 | 149 | 3.454447 | TCTCCAAGTCTCAAGGTTGTCAA | 59.546 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
149 | 150 | 3.038280 | TCTCCAAGTCTCAAGGTTGTCA | 58.962 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
150 | 151 | 3.070302 | AGTCTCCAAGTCTCAAGGTTGTC | 59.930 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
151 | 152 | 3.041946 | AGTCTCCAAGTCTCAAGGTTGT | 58.958 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
152 | 153 | 3.760580 | AGTCTCCAAGTCTCAAGGTTG | 57.239 | 47.619 | 0.00 | 0.00 | 0.00 | 3.77 |
153 | 154 | 4.080299 | ACAAAGTCTCCAAGTCTCAAGGTT | 60.080 | 41.667 | 0.00 | 0.00 | 0.00 | 3.50 |
154 | 155 | 3.456277 | ACAAAGTCTCCAAGTCTCAAGGT | 59.544 | 43.478 | 0.00 | 0.00 | 0.00 | 3.50 |
155 | 156 | 3.812053 | CACAAAGTCTCCAAGTCTCAAGG | 59.188 | 47.826 | 0.00 | 0.00 | 0.00 | 3.61 |
156 | 157 | 3.812053 | CCACAAAGTCTCCAAGTCTCAAG | 59.188 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
157 | 158 | 3.454447 | TCCACAAAGTCTCCAAGTCTCAA | 59.546 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
158 | 159 | 3.038280 | TCCACAAAGTCTCCAAGTCTCA | 58.962 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
159 | 160 | 3.070302 | AGTCCACAAAGTCTCCAAGTCTC | 59.930 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
160 | 161 | 3.041946 | AGTCCACAAAGTCTCCAAGTCT | 58.958 | 45.455 | 0.00 | 0.00 | 0.00 | 3.24 |
161 | 162 | 3.477210 | AGTCCACAAAGTCTCCAAGTC | 57.523 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
162 | 163 | 5.568620 | AATAGTCCACAAAGTCTCCAAGT | 57.431 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
163 | 164 | 6.884280 | AAAATAGTCCACAAAGTCTCCAAG | 57.116 | 37.500 | 0.00 | 0.00 | 0.00 | 3.61 |
164 | 165 | 7.094377 | GCATAAAATAGTCCACAAAGTCTCCAA | 60.094 | 37.037 | 0.00 | 0.00 | 0.00 | 3.53 |
165 | 166 | 6.374333 | GCATAAAATAGTCCACAAAGTCTCCA | 59.626 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
166 | 167 | 6.599638 | AGCATAAAATAGTCCACAAAGTCTCC | 59.400 | 38.462 | 0.00 | 0.00 | 0.00 | 3.71 |
167 | 168 | 7.617041 | AGCATAAAATAGTCCACAAAGTCTC | 57.383 | 36.000 | 0.00 | 0.00 | 0.00 | 3.36 |
168 | 169 | 9.515226 | TTAAGCATAAAATAGTCCACAAAGTCT | 57.485 | 29.630 | 0.00 | 0.00 | 0.00 | 3.24 |
179 | 180 | 8.730680 | CGGCCATCTTATTAAGCATAAAATAGT | 58.269 | 33.333 | 2.24 | 0.00 | 0.00 | 2.12 |
180 | 181 | 8.730680 | ACGGCCATCTTATTAAGCATAAAATAG | 58.269 | 33.333 | 2.24 | 0.00 | 0.00 | 1.73 |
181 | 182 | 8.630054 | ACGGCCATCTTATTAAGCATAAAATA | 57.370 | 30.769 | 2.24 | 0.00 | 0.00 | 1.40 |
182 | 183 | 7.524717 | ACGGCCATCTTATTAAGCATAAAAT | 57.475 | 32.000 | 2.24 | 0.00 | 0.00 | 1.82 |
183 | 184 | 6.952773 | ACGGCCATCTTATTAAGCATAAAA | 57.047 | 33.333 | 2.24 | 0.00 | 0.00 | 1.52 |
184 | 185 | 7.361713 | GCATACGGCCATCTTATTAAGCATAAA | 60.362 | 37.037 | 2.24 | 0.00 | 36.11 | 1.40 |
185 | 186 | 6.093495 | GCATACGGCCATCTTATTAAGCATAA | 59.907 | 38.462 | 2.24 | 0.00 | 36.11 | 1.90 |
186 | 187 | 5.584649 | GCATACGGCCATCTTATTAAGCATA | 59.415 | 40.000 | 2.24 | 0.00 | 36.11 | 3.14 |
187 | 188 | 4.396166 | GCATACGGCCATCTTATTAAGCAT | 59.604 | 41.667 | 2.24 | 0.00 | 36.11 | 3.79 |
188 | 189 | 3.751175 | GCATACGGCCATCTTATTAAGCA | 59.249 | 43.478 | 2.24 | 0.00 | 36.11 | 3.91 |
189 | 190 | 3.751175 | TGCATACGGCCATCTTATTAAGC | 59.249 | 43.478 | 2.24 | 0.00 | 43.89 | 3.09 |
190 | 191 | 5.643348 | TGATGCATACGGCCATCTTATTAAG | 59.357 | 40.000 | 2.24 | 0.00 | 43.89 | 1.85 |
191 | 192 | 5.555966 | TGATGCATACGGCCATCTTATTAA | 58.444 | 37.500 | 2.24 | 0.00 | 43.89 | 1.40 |
192 | 193 | 5.159273 | TGATGCATACGGCCATCTTATTA | 57.841 | 39.130 | 2.24 | 0.00 | 43.89 | 0.98 |
193 | 194 | 4.019792 | TGATGCATACGGCCATCTTATT | 57.980 | 40.909 | 2.24 | 0.00 | 43.89 | 1.40 |
194 | 195 | 3.701205 | TGATGCATACGGCCATCTTAT | 57.299 | 42.857 | 2.24 | 0.00 | 43.89 | 1.73 |
195 | 196 | 3.337358 | CATGATGCATACGGCCATCTTA | 58.663 | 45.455 | 2.24 | 0.00 | 43.89 | 2.10 |
196 | 197 | 2.156917 | CATGATGCATACGGCCATCTT | 58.843 | 47.619 | 2.24 | 0.00 | 43.89 | 2.40 |
197 | 198 | 1.817357 | CATGATGCATACGGCCATCT | 58.183 | 50.000 | 2.24 | 0.00 | 43.89 | 2.90 |
198 | 199 | 0.169672 | GCATGATGCATACGGCCATC | 59.830 | 55.000 | 13.36 | 0.00 | 44.26 | 3.51 |
199 | 200 | 2.260247 | GCATGATGCATACGGCCAT | 58.740 | 52.632 | 13.36 | 0.00 | 44.26 | 4.40 |
200 | 201 | 3.748623 | GCATGATGCATACGGCCA | 58.251 | 55.556 | 13.36 | 0.00 | 44.26 | 5.36 |
217 | 218 | 4.559063 | CCCCGGCCTCTGCATCAG | 62.559 | 72.222 | 0.00 | 0.00 | 40.13 | 2.90 |
219 | 220 | 3.764160 | CTTCCCCGGCCTCTGCATC | 62.764 | 68.421 | 0.00 | 0.00 | 40.13 | 3.91 |
220 | 221 | 3.801997 | CTTCCCCGGCCTCTGCAT | 61.802 | 66.667 | 0.00 | 0.00 | 40.13 | 3.96 |
279 | 280 | 7.884877 | ACACATTTCTCCTCTTGTTGATTGATA | 59.115 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
404 | 406 | 1.267806 | CCGTCAATGTGCTTTCAGCTT | 59.732 | 47.619 | 0.00 | 0.00 | 42.97 | 3.74 |
419 | 421 | 0.896479 | TTCCACATCGTCTCCCGTCA | 60.896 | 55.000 | 0.00 | 0.00 | 37.94 | 4.35 |
430 | 432 | 3.003068 | CGCATTCATTCCTCTTCCACATC | 59.997 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
431 | 433 | 2.947652 | CGCATTCATTCCTCTTCCACAT | 59.052 | 45.455 | 0.00 | 0.00 | 0.00 | 3.21 |
432 | 434 | 2.358957 | CGCATTCATTCCTCTTCCACA | 58.641 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
511 | 1449 | 7.165154 | CAGTCGTGAAACATTACAAAAACGAAT | 59.835 | 33.333 | 0.00 | 0.00 | 40.10 | 3.34 |
527 | 1465 | 3.317993 | TCACAGTGAGATCAGTCGTGAAA | 59.682 | 43.478 | 0.00 | 1.84 | 35.96 | 2.69 |
545 | 1483 | 4.406648 | AATCCTCGCAGATGTTATCACA | 57.593 | 40.909 | 0.00 | 0.00 | 37.31 | 3.58 |
558 | 1496 | 6.152379 | ACAATCTCTTTTGAAAAATCCTCGC | 58.848 | 36.000 | 0.00 | 0.00 | 0.00 | 5.03 |
592 | 1544 | 1.361668 | CTGTACTGCGTCATGCCACC | 61.362 | 60.000 | 0.00 | 0.00 | 45.60 | 4.61 |
594 | 1546 | 1.079197 | CCTGTACTGCGTCATGCCA | 60.079 | 57.895 | 0.00 | 0.00 | 45.60 | 4.92 |
609 | 1561 | 1.291877 | GCAGGTAACGTGTCAGCCTG | 61.292 | 60.000 | 15.34 | 15.34 | 46.82 | 4.85 |
675 | 1673 | 3.099362 | GACGGATAGCTATTGCGTATCG | 58.901 | 50.000 | 17.62 | 11.37 | 41.35 | 2.92 |
681 | 1679 | 2.150397 | AACGGACGGATAGCTATTGC | 57.850 | 50.000 | 7.87 | 0.00 | 40.05 | 3.56 |
751 | 1749 | 0.036388 | TGAGTTGGGATGCGACCTTC | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
849 | 1847 | 5.234329 | TCGCGGAATCAGATGATTTTCTAAC | 59.766 | 40.000 | 6.13 | 0.00 | 44.14 | 2.34 |
853 | 1851 | 4.212004 | TGATCGCGGAATCAGATGATTTTC | 59.788 | 41.667 | 6.13 | 5.06 | 44.14 | 2.29 |
855 | 1853 | 3.732212 | TGATCGCGGAATCAGATGATTT | 58.268 | 40.909 | 6.13 | 0.00 | 44.14 | 2.17 |
865 | 1863 | 2.006888 | ACGAATGTTTGATCGCGGAAT | 58.993 | 42.857 | 6.13 | 0.00 | 42.61 | 3.01 |
1020 | 2042 | 2.343758 | GCCGTGAAGCTGGTGAGA | 59.656 | 61.111 | 0.00 | 0.00 | 0.00 | 3.27 |
1021 | 2043 | 3.114616 | CGCCGTGAAGCTGGTGAG | 61.115 | 66.667 | 0.00 | 0.00 | 38.00 | 3.51 |
1022 | 2044 | 4.680237 | CCGCCGTGAAGCTGGTGA | 62.680 | 66.667 | 3.03 | 0.00 | 38.00 | 4.02 |
1023 | 2045 | 4.988598 | ACCGCCGTGAAGCTGGTG | 62.989 | 66.667 | 0.00 | 0.00 | 37.94 | 4.17 |
1024 | 2046 | 4.681978 | GACCGCCGTGAAGCTGGT | 62.682 | 66.667 | 0.00 | 0.00 | 40.63 | 4.00 |
1025 | 2047 | 4.680237 | TGACCGCCGTGAAGCTGG | 62.680 | 66.667 | 0.00 | 0.00 | 34.13 | 4.85 |
1195 | 2220 | 0.472044 | ATGCCGGTGTACCATATGCA | 59.528 | 50.000 | 1.90 | 0.00 | 35.14 | 3.96 |
1288 | 2313 | 2.408565 | AGAGTTGTTGGTGAGGGAGAA | 58.591 | 47.619 | 0.00 | 0.00 | 0.00 | 2.87 |
1322 | 2347 | 1.145156 | CGGCCACCATTACCATCGA | 59.855 | 57.895 | 2.24 | 0.00 | 0.00 | 3.59 |
1469 | 2494 | 0.593128 | GAATGTGTCAGTGTGGTGGC | 59.407 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
1515 | 2540 | 0.810648 | CGGTGCCATGTGTGCTATTT | 59.189 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
1617 | 2647 | 2.704065 | CCCGTCCCATAGGAATACTTGT | 59.296 | 50.000 | 0.00 | 0.00 | 46.38 | 3.16 |
1827 | 6153 | 3.366476 | GCTGATACTCGCCATAGTAGGTG | 60.366 | 52.174 | 0.00 | 0.00 | 40.55 | 4.00 |
2088 | 7168 | 1.227383 | CCCCGGCAAGGCTAAGAAT | 59.773 | 57.895 | 0.00 | 0.00 | 39.21 | 2.40 |
2147 | 7227 | 0.520404 | GCACTCCTCGAACGTACTCA | 59.480 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2257 | 7340 | 1.475280 | CCATTCCACACCAAGCATCTG | 59.525 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
2354 | 7737 | 4.599047 | AGCTAGATCTGATACCAGTTGC | 57.401 | 45.455 | 5.18 | 0.00 | 41.16 | 4.17 |
2531 | 7979 | 8.918202 | TTTCTAAGTCATGTAACAACCATCTT | 57.082 | 30.769 | 0.00 | 0.00 | 0.00 | 2.40 |
2681 | 8140 | 6.840780 | ACACTAGAGCTTAAAATTGGCAAT | 57.159 | 33.333 | 6.96 | 6.96 | 0.00 | 3.56 |
2688 | 8147 | 7.908453 | AGTACCAGAACACTAGAGCTTAAAAT | 58.092 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
2721 | 8180 | 6.454795 | TGAATTTTAACCATGCAAGGAAGAC | 58.545 | 36.000 | 16.33 | 0.00 | 0.00 | 3.01 |
2798 | 8260 | 9.333497 | GGTGGTCAAATATAACGTTTTACTTTC | 57.667 | 33.333 | 5.91 | 0.00 | 0.00 | 2.62 |
2823 | 8285 | 4.141914 | GGTGAGACTTACACTCCCATAAGG | 60.142 | 50.000 | 0.00 | 0.00 | 38.20 | 2.69 |
2824 | 8286 | 4.466370 | TGGTGAGACTTACACTCCCATAAG | 59.534 | 45.833 | 0.00 | 0.00 | 38.20 | 1.73 |
2825 | 8287 | 4.222145 | GTGGTGAGACTTACACTCCCATAA | 59.778 | 45.833 | 0.00 | 0.00 | 37.21 | 1.90 |
2826 | 8288 | 3.767673 | GTGGTGAGACTTACACTCCCATA | 59.232 | 47.826 | 0.00 | 0.00 | 37.21 | 2.74 |
2827 | 8289 | 2.567615 | GTGGTGAGACTTACACTCCCAT | 59.432 | 50.000 | 0.00 | 0.00 | 37.21 | 4.00 |
2828 | 8290 | 1.968493 | GTGGTGAGACTTACACTCCCA | 59.032 | 52.381 | 0.00 | 0.00 | 38.20 | 4.37 |
2829 | 8291 | 1.275573 | GGTGGTGAGACTTACACTCCC | 59.724 | 57.143 | 0.00 | 0.00 | 38.20 | 4.30 |
2830 | 8292 | 1.968493 | TGGTGGTGAGACTTACACTCC | 59.032 | 52.381 | 0.00 | 0.00 | 38.20 | 3.85 |
2831 | 8293 | 3.746045 | TTGGTGGTGAGACTTACACTC | 57.254 | 47.619 | 0.00 | 0.00 | 38.20 | 3.51 |
2832 | 8294 | 4.080526 | AGTTTTGGTGGTGAGACTTACACT | 60.081 | 41.667 | 0.00 | 0.00 | 38.20 | 3.55 |
2833 | 8295 | 4.196971 | AGTTTTGGTGGTGAGACTTACAC | 58.803 | 43.478 | 0.00 | 0.00 | 37.51 | 2.90 |
2834 | 8296 | 4.497291 | AGTTTTGGTGGTGAGACTTACA | 57.503 | 40.909 | 0.00 | 0.00 | 0.00 | 2.41 |
2835 | 8297 | 4.036380 | CCAAGTTTTGGTGGTGAGACTTAC | 59.964 | 45.833 | 0.00 | 0.00 | 45.93 | 2.34 |
2836 | 8298 | 4.204012 | CCAAGTTTTGGTGGTGAGACTTA | 58.796 | 43.478 | 0.00 | 0.00 | 45.93 | 2.24 |
2837 | 8299 | 3.023832 | CCAAGTTTTGGTGGTGAGACTT | 58.976 | 45.455 | 0.00 | 0.00 | 45.93 | 3.01 |
2838 | 8300 | 2.654863 | CCAAGTTTTGGTGGTGAGACT | 58.345 | 47.619 | 0.00 | 0.00 | 45.93 | 3.24 |
2849 | 8311 | 4.247267 | ACATGATGCAGTCCAAGTTTTG | 57.753 | 40.909 | 0.00 | 0.00 | 0.00 | 2.44 |
2850 | 8312 | 5.072741 | AGTACATGATGCAGTCCAAGTTTT | 58.927 | 37.500 | 0.00 | 0.00 | 0.00 | 2.43 |
2851 | 8313 | 4.655963 | AGTACATGATGCAGTCCAAGTTT | 58.344 | 39.130 | 0.00 | 0.00 | 0.00 | 2.66 |
2852 | 8314 | 4.292186 | AGTACATGATGCAGTCCAAGTT | 57.708 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
2853 | 8315 | 3.988976 | AGTACATGATGCAGTCCAAGT | 57.011 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
2854 | 8316 | 4.122776 | GGTAGTACATGATGCAGTCCAAG | 58.877 | 47.826 | 0.00 | 0.00 | 0.00 | 3.61 |
2855 | 8317 | 3.517500 | TGGTAGTACATGATGCAGTCCAA | 59.482 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
2856 | 8318 | 3.103742 | TGGTAGTACATGATGCAGTCCA | 58.896 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
2857 | 8319 | 3.819564 | TGGTAGTACATGATGCAGTCC | 57.180 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
2858 | 8320 | 9.658799 | ATTATTATGGTAGTACATGATGCAGTC | 57.341 | 33.333 | 0.00 | 0.00 | 30.78 | 3.51 |
2874 | 8336 | 8.720537 | CGGGGAAGGGTATATTATTATTATGGT | 58.279 | 37.037 | 0.00 | 0.00 | 0.00 | 3.55 |
2875 | 8337 | 7.664318 | GCGGGGAAGGGTATATTATTATTATGG | 59.336 | 40.741 | 0.00 | 0.00 | 0.00 | 2.74 |
2876 | 8338 | 8.215050 | TGCGGGGAAGGGTATATTATTATTATG | 58.785 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
2877 | 8339 | 8.339720 | TGCGGGGAAGGGTATATTATTATTAT | 57.660 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
2878 | 8340 | 7.752518 | TGCGGGGAAGGGTATATTATTATTA | 57.247 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2879 | 8341 | 6.645884 | TGCGGGGAAGGGTATATTATTATT | 57.354 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
2880 | 8342 | 6.645884 | TTGCGGGGAAGGGTATATTATTAT | 57.354 | 37.500 | 0.00 | 0.00 | 0.00 | 1.28 |
2881 | 8343 | 6.451292 | TTTGCGGGGAAGGGTATATTATTA | 57.549 | 37.500 | 0.00 | 0.00 | 0.00 | 0.98 |
2882 | 8344 | 5.327737 | TTTGCGGGGAAGGGTATATTATT | 57.672 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
2883 | 8345 | 5.327737 | TTTTGCGGGGAAGGGTATATTAT | 57.672 | 39.130 | 0.00 | 0.00 | 0.00 | 1.28 |
2884 | 8346 | 4.792513 | TTTTGCGGGGAAGGGTATATTA | 57.207 | 40.909 | 0.00 | 0.00 | 0.00 | 0.98 |
2885 | 8347 | 3.673543 | TTTTGCGGGGAAGGGTATATT | 57.326 | 42.857 | 0.00 | 0.00 | 0.00 | 1.28 |
2886 | 8348 | 3.673543 | TTTTTGCGGGGAAGGGTATAT | 57.326 | 42.857 | 0.00 | 0.00 | 0.00 | 0.86 |
2887 | 8349 | 3.673543 | ATTTTTGCGGGGAAGGGTATA | 57.326 | 42.857 | 0.00 | 0.00 | 0.00 | 1.47 |
2888 | 8350 | 2.543037 | ATTTTTGCGGGGAAGGGTAT | 57.457 | 45.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2889 | 8351 | 3.453059 | TTATTTTTGCGGGGAAGGGTA | 57.547 | 42.857 | 0.00 | 0.00 | 0.00 | 3.69 |
2890 | 8352 | 2.312424 | TTATTTTTGCGGGGAAGGGT | 57.688 | 45.000 | 0.00 | 0.00 | 0.00 | 4.34 |
2891 | 8353 | 5.545063 | ATTATTATTTTTGCGGGGAAGGG | 57.455 | 39.130 | 0.00 | 0.00 | 0.00 | 3.95 |
2951 | 8413 | 6.608405 | TGTTCTCGTTTTATATACTCAGGGGA | 59.392 | 38.462 | 0.00 | 0.00 | 0.00 | 4.81 |
2968 | 8430 | 7.064728 | GCCATCTAAGAAGTTATTTGTTCTCGT | 59.935 | 37.037 | 0.00 | 0.00 | 31.61 | 4.18 |
2999 | 8461 | 7.341445 | CTCCTCAGAGTAGTTAAACTATGCT | 57.659 | 40.000 | 0.00 | 0.00 | 38.34 | 3.79 |
3015 | 8477 | 5.363101 | GTTATCATTGCATCACTCCTCAGA | 58.637 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
3019 | 8481 | 4.142609 | ACGTTATCATTGCATCACTCCT | 57.857 | 40.909 | 0.00 | 0.00 | 0.00 | 3.69 |
3028 | 8490 | 6.522510 | GGTACTAGATCGTACGTTATCATTGC | 59.477 | 42.308 | 16.05 | 4.14 | 40.44 | 3.56 |
3030 | 8492 | 7.734924 | TGGTACTAGATCGTACGTTATCATT | 57.265 | 36.000 | 16.05 | 3.26 | 40.44 | 2.57 |
3031 | 8493 | 7.734924 | TTGGTACTAGATCGTACGTTATCAT | 57.265 | 36.000 | 16.05 | 0.00 | 40.44 | 2.45 |
3036 | 8498 | 8.213518 | TCTTATTTGGTACTAGATCGTACGTT | 57.786 | 34.615 | 16.05 | 6.89 | 40.44 | 3.99 |
3043 | 8505 | 8.308207 | GGACTCCATCTTATTTGGTACTAGATC | 58.692 | 40.741 | 0.00 | 0.00 | 35.64 | 2.75 |
3049 | 8514 | 6.235231 | TGAGGACTCCATCTTATTTGGTAC | 57.765 | 41.667 | 0.00 | 0.00 | 35.64 | 3.34 |
3070 | 8535 | 7.907389 | AGAAGTATGTGGTTTCTCTAACATGA | 58.093 | 34.615 | 0.00 | 0.00 | 38.55 | 3.07 |
3079 | 8544 | 3.368531 | GGCGAGAGAAGTATGTGGTTTCT | 60.369 | 47.826 | 0.00 | 0.00 | 34.06 | 2.52 |
3091 | 8556 | 2.315925 | TTGCAATAGGGCGAGAGAAG | 57.684 | 50.000 | 0.00 | 0.00 | 36.28 | 2.85 |
3094 | 8559 | 1.143305 | CGATTGCAATAGGGCGAGAG | 58.857 | 55.000 | 12.97 | 0.00 | 36.28 | 3.20 |
3099 | 8564 | 1.512926 | ACGATCGATTGCAATAGGGC | 58.487 | 50.000 | 24.34 | 7.14 | 0.00 | 5.19 |
3114 | 8579 | 2.288961 | GGACATGGTGTACGAACGAT | 57.711 | 50.000 | 0.00 | 0.00 | 0.00 | 3.73 |
3127 | 8592 | 3.335356 | AAGGGCTCTGGCGGACATG | 62.335 | 63.158 | 0.00 | 0.00 | 39.81 | 3.21 |
3135 | 8600 | 0.825010 | ACAAAGTGCAAGGGCTCTGG | 60.825 | 55.000 | 0.00 | 0.00 | 42.66 | 3.86 |
3140 | 8605 | 4.736165 | CACACAAAGTGCAAGGGC | 57.264 | 55.556 | 0.00 | 0.00 | 42.15 | 5.19 |
3150 | 8615 | 0.110010 | CGCACACACACACACACAAA | 60.110 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
3151 | 8616 | 1.499502 | CGCACACACACACACACAA | 59.500 | 52.632 | 0.00 | 0.00 | 0.00 | 3.33 |
3152 | 8617 | 3.033166 | GCGCACACACACACACACA | 62.033 | 57.895 | 0.30 | 0.00 | 0.00 | 3.72 |
3153 | 8618 | 2.277247 | GCGCACACACACACACAC | 60.277 | 61.111 | 0.30 | 0.00 | 0.00 | 3.82 |
3154 | 8619 | 3.858989 | CGCGCACACACACACACA | 61.859 | 61.111 | 8.75 | 0.00 | 0.00 | 3.72 |
3169 | 8634 | 4.851114 | CTGTGTGTATGCGCGCGC | 62.851 | 66.667 | 45.02 | 45.02 | 38.36 | 6.86 |
3170 | 8635 | 2.024226 | ATTCTGTGTGTATGCGCGCG | 62.024 | 55.000 | 28.44 | 28.44 | 38.36 | 6.86 |
3171 | 8636 | 0.587242 | CATTCTGTGTGTATGCGCGC | 60.587 | 55.000 | 27.26 | 27.26 | 36.27 | 6.86 |
3172 | 8637 | 0.026674 | CCATTCTGTGTGTATGCGCG | 59.973 | 55.000 | 0.00 | 0.00 | 0.00 | 6.86 |
3173 | 8638 | 0.378257 | CCCATTCTGTGTGTATGCGC | 59.622 | 55.000 | 0.00 | 0.00 | 0.00 | 6.09 |
3222 | 8687 | 5.978919 | GCGATTGCAATGATATGGAAAGAAA | 59.021 | 36.000 | 18.59 | 0.00 | 42.15 | 2.52 |
3224 | 8689 | 4.823442 | AGCGATTGCAATGATATGGAAAGA | 59.177 | 37.500 | 18.59 | 0.00 | 46.23 | 2.52 |
3261 | 8726 | 1.145571 | AGCTAACCCCTTCAACACCA | 58.854 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.