Multiple sequence alignment - TraesCS5A01G350600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G350600 chr5A 100.000 2798 0 0 1 2798 553419891 553422688 0.000000e+00 5168
1 TraesCS5A01G350600 chr5D 92.315 2199 98 31 323 2480 438359290 438361458 0.000000e+00 3059
2 TraesCS5A01G350600 chr5B 93.448 2030 87 22 474 2480 532876126 532878132 0.000000e+00 2970
3 TraesCS5A01G350600 chr5B 90.226 133 12 1 2667 2798 325972925 325973057 3.710000e-39 172
4 TraesCS5A01G350600 chr1A 93.103 812 53 2 992 1800 566564169 566564980 0.000000e+00 1186
5 TraesCS5A01G350600 chr1D 93.176 806 52 2 998 1800 472560918 472561723 0.000000e+00 1181
6 TraesCS5A01G350600 chr1D 86.900 229 23 5 77 303 435163920 435163697 1.660000e-62 250
7 TraesCS5A01G350600 chr1B 92.365 812 59 2 992 1800 657272061 657272872 0.000000e+00 1153
8 TraesCS5A01G350600 chr1B 89.073 723 79 0 1076 1798 542579897 542579175 0.000000e+00 898
9 TraesCS5A01G350600 chr1B 88.889 720 80 0 1079 1798 542432437 542431718 0.000000e+00 887
10 TraesCS5A01G350600 chr7D 88.520 784 75 10 1013 1796 264752817 264753585 0.000000e+00 935
11 TraesCS5A01G350600 chr7D 86.047 172 17 3 133 304 227408862 227409026 7.960000e-41 178
12 TraesCS5A01G350600 chr7D 87.500 144 13 2 1 143 227408702 227408841 8.020000e-36 161
13 TraesCS5A01G350600 chr7A 90.139 720 65 3 1077 1796 288928689 288929402 0.000000e+00 931
14 TraesCS5A01G350600 chr6D 91.083 314 25 3 1 313 465032814 465032503 3.330000e-114 422
15 TraesCS5A01G350600 chr2A 88.199 322 30 6 1 321 694856265 694855951 7.320000e-101 377
16 TraesCS5A01G350600 chr4B 86.429 280 28 7 25 303 631549682 631549952 5.860000e-77 298
17 TraesCS5A01G350600 chr4B 89.474 133 13 1 2667 2798 312931497 312931629 1.720000e-37 167
18 TraesCS5A01G350600 chr7B 90.226 133 12 1 2667 2798 53901584 53901452 3.710000e-39 172
19 TraesCS5A01G350600 chr7B 89.474 133 13 1 2667 2798 330407457 330407589 1.720000e-37 167
20 TraesCS5A01G350600 chr7B 89.474 133 13 1 2667 2798 519940377 519940245 1.720000e-37 167
21 TraesCS5A01G350600 chr6A 89.474 133 13 1 2667 2798 583861419 583861551 1.720000e-37 167
22 TraesCS5A01G350600 chr3B 89.474 133 13 1 2667 2798 709016167 709016299 1.720000e-37 167
23 TraesCS5A01G350600 chr2B 89.474 133 13 1 2667 2798 617444925 617445057 1.720000e-37 167
24 TraesCS5A01G350600 chr4A 89.394 132 13 1 2668 2798 710483452 710483321 6.200000e-37 165


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G350600 chr5A 553419891 553422688 2797 False 5168 5168 100.000 1 2798 1 chr5A.!!$F1 2797
1 TraesCS5A01G350600 chr5D 438359290 438361458 2168 False 3059 3059 92.315 323 2480 1 chr5D.!!$F1 2157
2 TraesCS5A01G350600 chr5B 532876126 532878132 2006 False 2970 2970 93.448 474 2480 1 chr5B.!!$F2 2006
3 TraesCS5A01G350600 chr1A 566564169 566564980 811 False 1186 1186 93.103 992 1800 1 chr1A.!!$F1 808
4 TraesCS5A01G350600 chr1D 472560918 472561723 805 False 1181 1181 93.176 998 1800 1 chr1D.!!$F1 802
5 TraesCS5A01G350600 chr1B 657272061 657272872 811 False 1153 1153 92.365 992 1800 1 chr1B.!!$F1 808
6 TraesCS5A01G350600 chr1B 542579175 542579897 722 True 898 898 89.073 1076 1798 1 chr1B.!!$R2 722
7 TraesCS5A01G350600 chr1B 542431718 542432437 719 True 887 887 88.889 1079 1798 1 chr1B.!!$R1 719
8 TraesCS5A01G350600 chr7D 264752817 264753585 768 False 935 935 88.520 1013 1796 1 chr7D.!!$F1 783
9 TraesCS5A01G350600 chr7A 288928689 288929402 713 False 931 931 90.139 1077 1796 1 chr7A.!!$F1 719

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
771 790 0.041684 AAAATCCCAAGCTCCCCCAG 59.958 55.0 0.0 0.0 0.0 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2652 2697 0.171455 CTGACCCTGTCTGACGTAGC 59.829 60.0 2.98 0.0 34.21 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.669164 AAAGGCAAACTAAAAGACAACCA 57.331 34.783 0.00 0.00 0.00 3.67
25 26 5.869649 AAGGCAAACTAAAAGACAACCAT 57.130 34.783 0.00 0.00 0.00 3.55
26 27 5.869649 AGGCAAACTAAAAGACAACCATT 57.130 34.783 0.00 0.00 0.00 3.16
27 28 6.233905 AGGCAAACTAAAAGACAACCATTT 57.766 33.333 0.00 0.00 0.00 2.32
28 29 6.048509 AGGCAAACTAAAAGACAACCATTTG 58.951 36.000 0.00 0.00 38.83 2.32
29 30 5.277297 GGCAAACTAAAAGACAACCATTTGC 60.277 40.000 9.30 9.30 46.18 3.68
30 31 5.523552 GCAAACTAAAAGACAACCATTTGCT 59.476 36.000 10.28 0.00 44.46 3.91
31 32 6.699642 GCAAACTAAAAGACAACCATTTGCTA 59.300 34.615 10.28 0.00 44.46 3.49
32 33 7.223777 GCAAACTAAAAGACAACCATTTGCTAA 59.776 33.333 10.28 0.00 44.46 3.09
33 34 9.260002 CAAACTAAAAGACAACCATTTGCTAAT 57.740 29.630 0.00 0.00 36.00 1.73
35 36 9.908152 AACTAAAAGACAACCATTTGCTAATAC 57.092 29.630 0.00 0.00 36.00 1.89
36 37 9.073475 ACTAAAAGACAACCATTTGCTAATACA 57.927 29.630 0.00 0.00 36.00 2.29
37 38 9.906660 CTAAAAGACAACCATTTGCTAATACAA 57.093 29.630 0.00 0.00 36.00 2.41
38 39 8.816640 AAAAGACAACCATTTGCTAATACAAG 57.183 30.769 0.00 0.00 36.00 3.16
39 40 7.759489 AAGACAACCATTTGCTAATACAAGA 57.241 32.000 0.00 0.00 36.00 3.02
40 41 7.944729 AGACAACCATTTGCTAATACAAGAT 57.055 32.000 0.00 0.00 36.00 2.40
41 42 8.353423 AGACAACCATTTGCTAATACAAGATT 57.647 30.769 0.00 0.00 36.00 2.40
42 43 9.461312 AGACAACCATTTGCTAATACAAGATTA 57.539 29.630 0.00 0.00 36.00 1.75
60 61 9.339850 ACAAGATTATTCTAGCTAGTTCGTAGA 57.660 33.333 20.10 0.00 0.00 2.59
63 64 9.953565 AGATTATTCTAGCTAGTTCGTAGATCT 57.046 33.333 20.10 15.63 40.09 2.75
65 66 9.727859 ATTATTCTAGCTAGTTCGTAGATCTCA 57.272 33.333 20.10 0.00 37.74 3.27
66 67 9.557061 TTATTCTAGCTAGTTCGTAGATCTCAA 57.443 33.333 20.10 3.14 37.74 3.02
67 68 7.860918 TTCTAGCTAGTTCGTAGATCTCAAA 57.139 36.000 20.10 0.00 37.74 2.69
68 69 8.453238 TTCTAGCTAGTTCGTAGATCTCAAAT 57.547 34.615 20.10 0.00 37.74 2.32
69 70 8.453238 TCTAGCTAGTTCGTAGATCTCAAATT 57.547 34.615 20.10 0.00 37.74 1.82
70 71 8.904834 TCTAGCTAGTTCGTAGATCTCAAATTT 58.095 33.333 20.10 0.00 37.74 1.82
71 72 9.522804 CTAGCTAGTTCGTAGATCTCAAATTTT 57.477 33.333 12.92 0.00 37.74 1.82
72 73 8.413899 AGCTAGTTCGTAGATCTCAAATTTTC 57.586 34.615 0.00 0.00 37.74 2.29
73 74 8.035394 AGCTAGTTCGTAGATCTCAAATTTTCA 58.965 33.333 0.00 0.00 37.74 2.69
74 75 8.821894 GCTAGTTCGTAGATCTCAAATTTTCAT 58.178 33.333 0.00 0.00 37.74 2.57
77 78 8.877779 AGTTCGTAGATCTCAAATTTTCATCTG 58.122 33.333 0.00 0.58 35.04 2.90
78 79 8.873830 GTTCGTAGATCTCAAATTTTCATCTGA 58.126 33.333 0.00 0.00 35.04 3.27
79 80 8.412608 TCGTAGATCTCAAATTTTCATCTGAC 57.587 34.615 0.00 6.79 0.00 3.51
80 81 8.034804 TCGTAGATCTCAAATTTTCATCTGACA 58.965 33.333 0.00 0.00 0.00 3.58
81 82 8.659491 CGTAGATCTCAAATTTTCATCTGACAA 58.341 33.333 0.00 0.00 0.00 3.18
97 98 8.843262 TCATCTGACAATATTTTCTAGCATTGG 58.157 33.333 3.41 0.00 33.61 3.16
98 99 7.031226 TCTGACAATATTTTCTAGCATTGGC 57.969 36.000 3.41 0.00 37.01 4.52
99 100 6.602803 TCTGACAATATTTTCTAGCATTGGCA 59.397 34.615 3.41 2.05 42.61 4.92
100 101 7.286087 TCTGACAATATTTTCTAGCATTGGCAT 59.714 33.333 2.40 0.00 43.53 4.40
101 102 7.784037 TGACAATATTTTCTAGCATTGGCATT 58.216 30.769 3.41 0.00 40.57 3.56
102 103 8.259411 TGACAATATTTTCTAGCATTGGCATTT 58.741 29.630 3.41 0.00 40.57 2.32
103 104 8.652810 ACAATATTTTCTAGCATTGGCATTTC 57.347 30.769 0.00 0.00 44.61 2.17
104 105 8.259411 ACAATATTTTCTAGCATTGGCATTTCA 58.741 29.630 0.00 0.00 44.61 2.69
105 106 9.268268 CAATATTTTCTAGCATTGGCATTTCAT 57.732 29.630 0.00 0.00 44.61 2.57
109 110 5.868043 TCTAGCATTGGCATTTCATATCG 57.132 39.130 0.00 0.00 44.61 2.92
110 111 5.308014 TCTAGCATTGGCATTTCATATCGT 58.692 37.500 0.00 0.00 44.61 3.73
111 112 6.463360 TCTAGCATTGGCATTTCATATCGTA 58.537 36.000 0.00 0.00 44.61 3.43
112 113 7.105588 TCTAGCATTGGCATTTCATATCGTAT 58.894 34.615 0.00 0.00 44.61 3.06
113 114 6.579666 AGCATTGGCATTTCATATCGTATT 57.420 33.333 0.00 0.00 44.61 1.89
114 115 6.985117 AGCATTGGCATTTCATATCGTATTT 58.015 32.000 0.00 0.00 44.61 1.40
115 116 7.086376 AGCATTGGCATTTCATATCGTATTTC 58.914 34.615 0.00 0.00 44.61 2.17
116 117 6.862608 GCATTGGCATTTCATATCGTATTTCA 59.137 34.615 0.00 0.00 40.72 2.69
117 118 7.381948 GCATTGGCATTTCATATCGTATTTCAA 59.618 33.333 0.00 0.00 40.72 2.69
118 119 9.247126 CATTGGCATTTCATATCGTATTTCAAA 57.753 29.630 0.00 0.00 0.00 2.69
119 120 9.985730 ATTGGCATTTCATATCGTATTTCAAAT 57.014 25.926 0.00 0.00 0.00 2.32
120 121 9.814899 TTGGCATTTCATATCGTATTTCAAATT 57.185 25.926 0.00 0.00 0.00 1.82
121 122 9.247126 TGGCATTTCATATCGTATTTCAAATTG 57.753 29.630 0.00 0.00 0.00 2.32
122 123 9.248291 GGCATTTCATATCGTATTTCAAATTGT 57.752 29.630 0.00 0.00 0.00 2.71
139 140 8.918961 TCAAATTGTTTGATTGTTAACTTCGT 57.081 26.923 7.22 0.00 44.21 3.85
140 141 9.015577 TCAAATTGTTTGATTGTTAACTTCGTC 57.984 29.630 7.22 0.85 44.21 4.20
141 142 9.019764 CAAATTGTTTGATTGTTAACTTCGTCT 57.980 29.630 7.22 0.00 43.26 4.18
142 143 9.581099 AAATTGTTTGATTGTTAACTTCGTCTT 57.419 25.926 7.22 0.00 0.00 3.01
143 144 8.782533 ATTGTTTGATTGTTAACTTCGTCTTC 57.217 30.769 7.22 0.00 0.00 2.87
144 145 7.548196 TGTTTGATTGTTAACTTCGTCTTCT 57.452 32.000 7.22 0.00 0.00 2.85
145 146 7.981142 TGTTTGATTGTTAACTTCGTCTTCTT 58.019 30.769 7.22 0.00 0.00 2.52
146 147 7.908082 TGTTTGATTGTTAACTTCGTCTTCTTG 59.092 33.333 7.22 0.00 0.00 3.02
147 148 6.539649 TGATTGTTAACTTCGTCTTCTTGG 57.460 37.500 7.22 0.00 0.00 3.61
148 149 4.806342 TTGTTAACTTCGTCTTCTTGGC 57.194 40.909 7.22 0.00 0.00 4.52
149 150 2.798283 TGTTAACTTCGTCTTCTTGGCG 59.202 45.455 7.22 0.00 46.47 5.69
150 151 2.798847 GTTAACTTCGTCTTCTTGGCGT 59.201 45.455 0.00 0.00 45.15 5.68
151 152 1.217882 AACTTCGTCTTCTTGGCGTG 58.782 50.000 0.00 0.00 45.15 5.34
152 153 0.104304 ACTTCGTCTTCTTGGCGTGT 59.896 50.000 0.00 0.00 45.15 4.49
153 154 1.338973 ACTTCGTCTTCTTGGCGTGTA 59.661 47.619 0.00 0.00 45.15 2.90
154 155 2.029290 ACTTCGTCTTCTTGGCGTGTAT 60.029 45.455 0.00 0.00 45.15 2.29
155 156 1.990799 TCGTCTTCTTGGCGTGTATG 58.009 50.000 0.00 0.00 45.15 2.39
156 157 1.271379 TCGTCTTCTTGGCGTGTATGT 59.729 47.619 0.00 0.00 45.15 2.29
157 158 1.390123 CGTCTTCTTGGCGTGTATGTG 59.610 52.381 0.00 0.00 39.21 3.21
158 159 1.732259 GTCTTCTTGGCGTGTATGTGG 59.268 52.381 0.00 0.00 0.00 4.17
159 160 1.621317 TCTTCTTGGCGTGTATGTGGA 59.379 47.619 0.00 0.00 0.00 4.02
160 161 2.037902 TCTTCTTGGCGTGTATGTGGAA 59.962 45.455 0.00 0.00 0.00 3.53
161 162 2.779755 TCTTGGCGTGTATGTGGAAT 57.220 45.000 0.00 0.00 0.00 3.01
162 163 3.066291 TCTTGGCGTGTATGTGGAATT 57.934 42.857 0.00 0.00 0.00 2.17
163 164 2.746904 TCTTGGCGTGTATGTGGAATTG 59.253 45.455 0.00 0.00 0.00 2.32
164 165 2.192664 TGGCGTGTATGTGGAATTGT 57.807 45.000 0.00 0.00 0.00 2.71
165 166 2.509569 TGGCGTGTATGTGGAATTGTT 58.490 42.857 0.00 0.00 0.00 2.83
166 167 2.227626 TGGCGTGTATGTGGAATTGTTG 59.772 45.455 0.00 0.00 0.00 3.33
167 168 2.486203 GGCGTGTATGTGGAATTGTTGA 59.514 45.455 0.00 0.00 0.00 3.18
168 169 3.488489 GCGTGTATGTGGAATTGTTGAC 58.512 45.455 0.00 0.00 0.00 3.18
169 170 3.669557 GCGTGTATGTGGAATTGTTGACC 60.670 47.826 0.00 0.00 0.00 4.02
170 171 3.500299 CGTGTATGTGGAATTGTTGACCA 59.500 43.478 0.00 0.00 0.00 4.02
171 172 4.023622 CGTGTATGTGGAATTGTTGACCAA 60.024 41.667 0.00 0.00 35.40 3.67
172 173 5.335583 CGTGTATGTGGAATTGTTGACCAAT 60.336 40.000 0.00 0.00 45.81 3.16
173 174 5.863397 GTGTATGTGGAATTGTTGACCAATG 59.137 40.000 0.00 0.00 43.04 2.82
174 175 5.538053 TGTATGTGGAATTGTTGACCAATGT 59.462 36.000 0.00 0.00 43.04 2.71
175 176 5.549742 ATGTGGAATTGTTGACCAATGTT 57.450 34.783 0.00 0.00 43.04 2.71
176 177 6.662865 ATGTGGAATTGTTGACCAATGTTA 57.337 33.333 0.00 0.00 43.04 2.41
177 178 6.083098 TGTGGAATTGTTGACCAATGTTAG 57.917 37.500 0.00 0.00 43.04 2.34
178 179 4.923281 GTGGAATTGTTGACCAATGTTAGC 59.077 41.667 0.00 0.00 43.04 3.09
179 180 4.021544 TGGAATTGTTGACCAATGTTAGCC 60.022 41.667 0.00 0.00 43.04 3.93
180 181 4.021544 GGAATTGTTGACCAATGTTAGCCA 60.022 41.667 0.00 0.00 43.04 4.75
181 182 5.337491 GGAATTGTTGACCAATGTTAGCCAT 60.337 40.000 0.00 0.00 43.04 4.40
182 183 4.517952 TTGTTGACCAATGTTAGCCATG 57.482 40.909 0.00 0.00 32.82 3.66
183 184 2.230992 TGTTGACCAATGTTAGCCATGC 59.769 45.455 0.00 0.00 32.82 4.06
184 185 2.493278 GTTGACCAATGTTAGCCATGCT 59.507 45.455 0.00 0.00 43.41 3.79
185 186 2.093890 TGACCAATGTTAGCCATGCTG 58.906 47.619 0.00 0.00 40.10 4.41
186 187 0.819582 ACCAATGTTAGCCATGCTGC 59.180 50.000 0.00 0.00 40.10 5.25
187 188 0.818938 CCAATGTTAGCCATGCTGCA 59.181 50.000 4.13 4.13 40.10 4.41
188 189 1.202371 CCAATGTTAGCCATGCTGCAG 60.202 52.381 10.11 10.11 40.10 4.41
189 190 0.458669 AATGTTAGCCATGCTGCAGC 59.541 50.000 31.89 31.89 40.10 5.25
190 191 0.395311 ATGTTAGCCATGCTGCAGCT 60.395 50.000 36.61 20.43 40.10 4.24
191 192 1.310216 TGTTAGCCATGCTGCAGCTG 61.310 55.000 36.61 29.03 40.10 4.24
192 193 2.412323 TTAGCCATGCTGCAGCTGC 61.412 57.895 36.61 32.25 40.10 5.25
225 226 3.708563 TTTTGTGTGTCTAGGCAAAGC 57.291 42.857 0.00 0.00 33.25 3.51
226 227 2.638480 TTGTGTGTCTAGGCAAAGCT 57.362 45.000 0.00 0.00 0.00 3.74
227 228 3.762407 TTGTGTGTCTAGGCAAAGCTA 57.238 42.857 0.00 0.00 0.00 3.32
228 229 3.762407 TGTGTGTCTAGGCAAAGCTAA 57.238 42.857 0.00 0.00 0.00 3.09
229 230 4.079980 TGTGTGTCTAGGCAAAGCTAAA 57.920 40.909 0.00 0.00 0.00 1.85
230 231 4.651778 TGTGTGTCTAGGCAAAGCTAAAT 58.348 39.130 0.00 0.00 0.00 1.40
231 232 4.455533 TGTGTGTCTAGGCAAAGCTAAATG 59.544 41.667 0.00 0.00 0.00 2.32
232 233 3.440173 TGTGTCTAGGCAAAGCTAAATGC 59.560 43.478 0.00 9.84 41.82 3.56
275 276 7.670605 AAACTATAAGGTAGTATGTGAGGCA 57.329 36.000 0.00 0.00 0.00 4.75
276 277 6.651975 ACTATAAGGTAGTATGTGAGGCAC 57.348 41.667 0.00 0.00 34.56 5.01
299 300 2.927553 AAACATTCTGGCTTCATCGC 57.072 45.000 0.00 0.00 0.00 4.58
307 308 2.974698 GCTTCATCGCCATCCCCG 60.975 66.667 0.00 0.00 0.00 5.73
308 309 2.974698 CTTCATCGCCATCCCCGC 60.975 66.667 0.00 0.00 0.00 6.13
309 310 4.562425 TTCATCGCCATCCCCGCC 62.562 66.667 0.00 0.00 0.00 6.13
318 319 4.892291 ATCCCCGCCCCCGTGTAT 62.892 66.667 0.00 0.00 0.00 2.29
322 323 3.542676 CCGCCCCCGTGTATGCTA 61.543 66.667 0.00 0.00 0.00 3.49
323 324 2.029073 CGCCCCCGTGTATGCTAG 59.971 66.667 0.00 0.00 0.00 3.42
324 325 2.280865 GCCCCCGTGTATGCTAGC 60.281 66.667 8.10 8.10 0.00 3.42
325 326 3.101796 GCCCCCGTGTATGCTAGCA 62.102 63.158 21.85 21.85 0.00 3.49
326 327 1.069765 CCCCCGTGTATGCTAGCAG 59.930 63.158 23.89 8.76 0.00 4.24
327 328 1.399744 CCCCCGTGTATGCTAGCAGA 61.400 60.000 23.89 16.74 0.00 4.26
397 398 9.698309 TGTTAATTTTACCATGTATTTGTGTGG 57.302 29.630 0.00 0.00 37.74 4.17
436 438 8.248117 AGATGCAAGAAATCAGTTTATTTTGC 57.752 30.769 0.00 0.00 38.43 3.68
437 439 6.450845 TGCAAGAAATCAGTTTATTTTGCG 57.549 33.333 0.00 0.00 39.51 4.85
438 440 6.212235 TGCAAGAAATCAGTTTATTTTGCGA 58.788 32.000 0.00 0.00 39.51 5.10
439 441 6.363088 TGCAAGAAATCAGTTTATTTTGCGAG 59.637 34.615 0.00 0.00 39.51 5.03
440 442 6.363357 GCAAGAAATCAGTTTATTTTGCGAGT 59.637 34.615 0.00 0.00 33.55 4.18
441 443 7.409767 GCAAGAAATCAGTTTATTTTGCGAGTC 60.410 37.037 0.00 0.00 33.55 3.36
442 444 6.307155 AGAAATCAGTTTATTTTGCGAGTCG 58.693 36.000 8.54 8.54 0.00 4.18
457 459 2.778659 GAGTCGCTCACATTTTCATGC 58.221 47.619 2.53 0.00 33.05 4.06
458 460 2.153645 AGTCGCTCACATTTTCATGCA 58.846 42.857 0.00 0.00 33.05 3.96
459 461 2.751259 AGTCGCTCACATTTTCATGCAT 59.249 40.909 0.00 0.00 33.05 3.96
460 462 3.940852 AGTCGCTCACATTTTCATGCATA 59.059 39.130 0.00 0.00 33.05 3.14
461 463 4.577693 AGTCGCTCACATTTTCATGCATAT 59.422 37.500 0.00 0.00 33.05 1.78
462 464 5.066893 AGTCGCTCACATTTTCATGCATATT 59.933 36.000 0.00 0.00 33.05 1.28
463 465 5.745294 GTCGCTCACATTTTCATGCATATTT 59.255 36.000 0.00 0.00 33.05 1.40
464 466 6.912051 GTCGCTCACATTTTCATGCATATTTA 59.088 34.615 0.00 0.00 33.05 1.40
465 467 7.431960 GTCGCTCACATTTTCATGCATATTTAA 59.568 33.333 0.00 0.00 33.05 1.52
466 468 8.136800 TCGCTCACATTTTCATGCATATTTAAT 58.863 29.630 0.00 0.00 33.05 1.40
467 469 8.757789 CGCTCACATTTTCATGCATATTTAATT 58.242 29.630 0.00 0.00 33.05 1.40
746 765 2.030401 CGCGAAATCCACCCGAACA 61.030 57.895 0.00 0.00 0.00 3.18
765 784 2.036346 ACACTGCAAAAATCCCAAGCTC 59.964 45.455 0.00 0.00 0.00 4.09
767 786 0.975887 TGCAAAAATCCCAAGCTCCC 59.024 50.000 0.00 0.00 0.00 4.30
771 790 0.041684 AAAATCCCAAGCTCCCCCAG 59.958 55.000 0.00 0.00 0.00 4.45
896 915 2.041206 GCGCCCTCCCCCTACTTAAG 62.041 65.000 0.00 0.00 0.00 1.85
904 923 2.103538 CCTACTTAAGCGCCGCGA 59.896 61.111 18.91 0.00 0.00 5.87
980 1007 2.982744 GCTCACCCGAAGCAAAGCC 61.983 63.158 0.00 0.00 0.00 4.35
984 1011 2.674380 CCCGAAGCAAAGCCAGCT 60.674 61.111 0.00 0.00 45.97 4.24
987 1014 1.427020 CGAAGCAAAGCCAGCTAGC 59.573 57.895 6.62 6.62 42.53 3.42
1296 1326 3.003763 AACCGGGAGCTGGAGGTC 61.004 66.667 6.32 0.00 41.50 3.85
2030 2060 3.008330 CAAGGCATCTCTGTTCTTCTGG 58.992 50.000 0.00 0.00 0.00 3.86
2037 2067 6.398918 GCATCTCTGTTCTTCTGGTTAACTA 58.601 40.000 5.42 0.00 0.00 2.24
2042 2072 7.069578 TCTCTGTTCTTCTGGTTAACTACTTGT 59.930 37.037 5.42 0.00 0.00 3.16
2043 2073 7.208080 TCTGTTCTTCTGGTTAACTACTTGTC 58.792 38.462 5.42 0.00 0.00 3.18
2057 2088 5.007682 ACTACTTGTCTCTCTGAACCTCTC 58.992 45.833 0.00 0.00 0.00 3.20
2067 2098 5.300752 TCTCTGAACCTCTCAATGTCAAAC 58.699 41.667 0.00 0.00 32.17 2.93
2070 2101 4.780815 TGAACCTCTCAATGTCAAACACT 58.219 39.130 0.00 0.00 0.00 3.55
2077 2108 6.122850 TCTCAATGTCAAACACTGAAGTTG 57.877 37.500 0.00 0.00 33.69 3.16
2086 2117 7.335673 TGTCAAACACTGAAGTTGTCTGAATAA 59.664 33.333 0.00 0.00 35.22 1.40
2101 2132 8.924511 TGTCTGAATAATTTTCTGAAAGTCCT 57.075 30.769 2.75 0.00 33.76 3.85
2125 2156 8.341173 CCTAGCAGCTAAAGTATTCAAATTCAG 58.659 37.037 3.09 0.00 0.00 3.02
2148 2179 8.493607 TCAGAAAGACATTTCATACCATCCATA 58.506 33.333 3.78 0.00 46.10 2.74
2177 2209 5.991328 TTCAAGACTGATCAACTCAACAC 57.009 39.130 0.00 0.00 32.14 3.32
2192 2224 7.225931 TCAACTCAACACTCCTGTAAATACAAC 59.774 37.037 0.00 0.00 35.50 3.32
2241 2273 2.041620 TCTCCAAATCTGGGGTTTCCTG 59.958 50.000 0.00 0.00 44.60 3.86
2320 2357 8.792831 TGAAGAAGAAAGTTACTGTTACTACG 57.207 34.615 0.00 0.00 0.00 3.51
2346 2383 1.003839 CTACCGGCCTTGCAGAACA 60.004 57.895 0.00 0.00 0.00 3.18
2354 2391 1.171308 CCTTGCAGAACAGTCATGGG 58.829 55.000 0.00 0.00 0.00 4.00
2374 2411 1.197721 GAATGGTGTTCCTGCTGTTCG 59.802 52.381 0.00 0.00 34.23 3.95
2375 2412 0.108585 ATGGTGTTCCTGCTGTTCGT 59.891 50.000 0.00 0.00 34.23 3.85
2405 2450 4.202305 GGATCTTCTCTTCCATCATTCCGT 60.202 45.833 0.00 0.00 31.99 4.69
2416 2461 0.545787 TCATTCCGTGGTACCCTGGT 60.546 55.000 10.07 0.00 0.00 4.00
2422 2467 0.686224 CGTGGTACCCTGGTTGGTTA 59.314 55.000 10.07 0.00 39.91 2.85
2476 2521 1.726853 CGCTTCCGTTCTCCAAGATT 58.273 50.000 0.00 0.00 0.00 2.40
2480 2525 2.363788 TCCGTTCTCCAAGATTGACG 57.636 50.000 0.00 0.00 0.00 4.35
2481 2526 0.721718 CCGTTCTCCAAGATTGACGC 59.278 55.000 0.00 0.00 0.00 5.19
2482 2527 0.366871 CGTTCTCCAAGATTGACGCG 59.633 55.000 3.53 3.53 0.00 6.01
2483 2528 0.721718 GTTCTCCAAGATTGACGCGG 59.278 55.000 12.47 0.00 0.00 6.46
2484 2529 0.320374 TTCTCCAAGATTGACGCGGT 59.680 50.000 12.47 0.00 0.00 5.68
2485 2530 0.389817 TCTCCAAGATTGACGCGGTG 60.390 55.000 12.47 0.00 0.00 4.94
2486 2531 1.361668 CTCCAAGATTGACGCGGTGG 61.362 60.000 12.47 6.08 0.00 4.61
2487 2532 2.398554 CCAAGATTGACGCGGTGGG 61.399 63.158 12.47 0.00 0.00 4.61
2488 2533 1.671054 CAAGATTGACGCGGTGGGT 60.671 57.895 12.47 0.00 0.00 4.51
2489 2534 1.375523 AAGATTGACGCGGTGGGTC 60.376 57.895 12.47 7.02 44.15 4.46
2490 2535 1.827399 AAGATTGACGCGGTGGGTCT 61.827 55.000 12.47 4.17 44.20 3.85
2491 2536 1.375523 GATTGACGCGGTGGGTCTT 60.376 57.895 12.47 3.37 44.20 3.01
2492 2537 0.953960 GATTGACGCGGTGGGTCTTT 60.954 55.000 12.47 3.07 44.20 2.52
2493 2538 0.536460 ATTGACGCGGTGGGTCTTTT 60.536 50.000 12.47 0.00 44.20 2.27
2494 2539 0.748729 TTGACGCGGTGGGTCTTTTT 60.749 50.000 12.47 0.00 44.20 1.94
2495 2540 1.281656 GACGCGGTGGGTCTTTTTG 59.718 57.895 12.47 0.00 41.34 2.44
2496 2541 1.153127 ACGCGGTGGGTCTTTTTGA 60.153 52.632 12.47 0.00 0.00 2.69
2497 2542 0.536460 ACGCGGTGGGTCTTTTTGAT 60.536 50.000 12.47 0.00 0.00 2.57
2498 2543 1.270947 ACGCGGTGGGTCTTTTTGATA 60.271 47.619 12.47 0.00 0.00 2.15
2499 2544 1.129811 CGCGGTGGGTCTTTTTGATAC 59.870 52.381 0.00 0.00 0.00 2.24
2500 2545 1.471287 GCGGTGGGTCTTTTTGATACC 59.529 52.381 0.00 0.00 0.00 2.73
2509 2554 6.650427 GGTCTTTTTGATACCCAAACTCTT 57.350 37.500 0.00 0.00 43.82 2.85
2510 2555 6.678878 GGTCTTTTTGATACCCAAACTCTTC 58.321 40.000 0.00 0.00 43.82 2.87
2511 2556 6.490381 GGTCTTTTTGATACCCAAACTCTTCT 59.510 38.462 0.00 0.00 43.82 2.85
2512 2557 7.014326 GGTCTTTTTGATACCCAAACTCTTCTT 59.986 37.037 0.00 0.00 43.82 2.52
2513 2558 8.414003 GTCTTTTTGATACCCAAACTCTTCTTT 58.586 33.333 0.00 0.00 43.82 2.52
2514 2559 8.413229 TCTTTTTGATACCCAAACTCTTCTTTG 58.587 33.333 0.00 0.00 43.82 2.77
2515 2560 6.648879 TTTGATACCCAAACTCTTCTTTGG 57.351 37.500 4.03 4.03 46.89 3.28
2516 2561 4.079253 TGATACCCAAACTCTTCTTTGGC 58.921 43.478 5.33 0.00 46.24 4.52
2517 2562 1.318576 ACCCAAACTCTTCTTTGGCG 58.681 50.000 5.33 2.55 46.24 5.69
2518 2563 0.039165 CCCAAACTCTTCTTTGGCGC 60.039 55.000 0.00 0.00 46.24 6.53
2519 2564 0.039165 CCAAACTCTTCTTTGGCGCC 60.039 55.000 22.73 22.73 42.89 6.53
2520 2565 0.385974 CAAACTCTTCTTTGGCGCCG 60.386 55.000 23.90 7.87 0.00 6.46
2521 2566 1.515521 AAACTCTTCTTTGGCGCCGG 61.516 55.000 23.90 14.68 0.00 6.13
2522 2567 3.804193 CTCTTCTTTGGCGCCGGC 61.804 66.667 23.90 19.07 38.90 6.13
2541 2586 2.671619 CCGGCGTGTGGGTGATTT 60.672 61.111 6.01 0.00 0.00 2.17
2542 2587 2.265182 CCGGCGTGTGGGTGATTTT 61.265 57.895 6.01 0.00 0.00 1.82
2543 2588 1.209127 CGGCGTGTGGGTGATTTTC 59.791 57.895 0.00 0.00 0.00 2.29
2544 2589 1.209127 GGCGTGTGGGTGATTTTCG 59.791 57.895 0.00 0.00 0.00 3.46
2545 2590 1.209127 GCGTGTGGGTGATTTTCGG 59.791 57.895 0.00 0.00 0.00 4.30
2546 2591 1.209127 CGTGTGGGTGATTTTCGGC 59.791 57.895 0.00 0.00 0.00 5.54
2547 2592 1.209127 GTGTGGGTGATTTTCGGCG 59.791 57.895 0.00 0.00 0.00 6.46
2548 2593 2.178273 GTGGGTGATTTTCGGCGC 59.822 61.111 0.00 0.00 0.00 6.53
2549 2594 2.033448 TGGGTGATTTTCGGCGCT 59.967 55.556 7.64 0.00 0.00 5.92
2550 2595 2.331893 TGGGTGATTTTCGGCGCTG 61.332 57.895 10.86 10.86 0.00 5.18
2551 2596 2.038269 GGGTGATTTTCGGCGCTGA 61.038 57.895 16.69 16.69 0.00 4.26
2552 2597 1.582610 GGGTGATTTTCGGCGCTGAA 61.583 55.000 27.37 27.37 0.00 3.02
2553 2598 0.239879 GGTGATTTTCGGCGCTGAAA 59.760 50.000 34.61 34.61 36.12 2.69
2556 2601 4.626225 TTTTCGGCGCTGAAAAGC 57.374 50.000 39.85 10.07 41.54 3.51
2563 2608 4.766088 CGCTGAAAAGCCTGCGCC 62.766 66.667 4.18 0.00 44.74 6.53
2564 2609 4.766088 GCTGAAAAGCCTGCGCCG 62.766 66.667 4.18 0.00 34.57 6.46
2565 2610 4.107051 CTGAAAAGCCTGCGCCGG 62.107 66.667 14.29 14.29 34.57 6.13
2566 2611 4.947147 TGAAAAGCCTGCGCCGGT 62.947 61.111 19.63 5.00 34.57 5.28
2567 2612 4.103103 GAAAAGCCTGCGCCGGTC 62.103 66.667 19.63 11.48 34.57 4.79
2583 2628 3.911698 TCGGTCATCGATGGGGCG 61.912 66.667 24.61 11.48 43.74 6.13
2584 2629 3.911698 CGGTCATCGATGGGGCGA 61.912 66.667 24.61 2.39 45.22 5.54
2585 2630 2.029666 GGTCATCGATGGGGCGAG 59.970 66.667 24.61 0.00 44.26 5.03
2586 2631 2.029666 GTCATCGATGGGGCGAGG 59.970 66.667 24.61 0.00 44.26 4.63
2587 2632 3.233980 TCATCGATGGGGCGAGGG 61.234 66.667 24.61 0.00 44.26 4.30
2588 2633 3.233980 CATCGATGGGGCGAGGGA 61.234 66.667 17.96 0.00 44.26 4.20
2589 2634 2.445845 ATCGATGGGGCGAGGGAA 60.446 61.111 0.00 0.00 44.26 3.97
2590 2635 2.511452 ATCGATGGGGCGAGGGAAG 61.511 63.158 0.00 0.00 44.26 3.46
2591 2636 4.241555 CGATGGGGCGAGGGAAGG 62.242 72.222 0.00 0.00 0.00 3.46
2592 2637 3.878667 GATGGGGCGAGGGAAGGG 61.879 72.222 0.00 0.00 0.00 3.95
2605 2650 4.492303 AAGGGGCCGGGCTAGCTA 62.492 66.667 28.80 0.00 0.00 3.32
2606 2651 3.794149 AAGGGGCCGGGCTAGCTAT 62.794 63.158 28.80 5.73 0.00 2.97
2607 2652 3.249961 GGGGCCGGGCTAGCTATT 61.250 66.667 28.80 0.00 0.00 1.73
2608 2653 2.347866 GGGCCGGGCTAGCTATTC 59.652 66.667 28.80 4.21 0.00 1.75
2609 2654 2.347866 GGCCGGGCTAGCTATTCC 59.652 66.667 22.87 6.16 0.00 3.01
2610 2655 2.048127 GCCGGGCTAGCTATTCCG 60.048 66.667 19.58 19.58 41.90 4.30
2612 2657 2.048127 CGGGCTAGCTATTCCGGC 60.048 66.667 18.97 10.41 38.93 6.13
2613 2658 2.347866 GGGCTAGCTATTCCGGCC 59.652 66.667 15.72 11.57 41.80 6.13
2614 2659 2.048127 GGCTAGCTATTCCGGCCG 60.048 66.667 21.04 21.04 33.30 6.13
2615 2660 2.048127 GCTAGCTATTCCGGCCGG 60.048 66.667 39.13 39.13 0.00 6.13
2616 2661 2.048127 CTAGCTATTCCGGCCGGC 60.048 66.667 39.89 26.57 34.68 6.13
2617 2662 3.591254 CTAGCTATTCCGGCCGGCC 62.591 68.421 39.89 36.69 34.68 6.13
2629 2674 4.873129 CCGGCCGGTCAGTCATCG 62.873 72.222 36.64 6.12 0.00 3.84
2630 2675 4.873129 CGGCCGGTCAGTCATCGG 62.873 72.222 20.10 0.00 45.84 4.18
2631 2676 3.771160 GGCCGGTCAGTCATCGGT 61.771 66.667 0.00 0.00 44.97 4.69
2632 2677 2.509336 GCCGGTCAGTCATCGGTG 60.509 66.667 1.90 0.00 44.97 4.94
2633 2678 3.001902 GCCGGTCAGTCATCGGTGA 62.002 63.158 1.90 0.00 44.97 4.02
2665 2710 2.202623 GGCGGCTACGTCAGACAG 60.203 66.667 0.00 0.00 45.76 3.51
2666 2711 2.202623 GCGGCTACGTCAGACAGG 60.203 66.667 0.41 0.00 43.45 4.00
2667 2712 2.490217 CGGCTACGTCAGACAGGG 59.510 66.667 0.41 0.00 34.81 4.45
2668 2713 2.341101 CGGCTACGTCAGACAGGGT 61.341 63.158 0.41 0.00 34.81 4.34
2669 2714 1.511768 GGCTACGTCAGACAGGGTC 59.488 63.158 0.41 0.00 29.64 4.46
2670 2715 1.248785 GGCTACGTCAGACAGGGTCA 61.249 60.000 0.41 0.00 34.60 4.02
2671 2716 0.171455 GCTACGTCAGACAGGGTCAG 59.829 60.000 0.41 0.00 34.60 3.51
2672 2717 1.535833 CTACGTCAGACAGGGTCAGT 58.464 55.000 0.41 0.00 34.60 3.41
2673 2718 1.887198 CTACGTCAGACAGGGTCAGTT 59.113 52.381 0.41 0.00 34.60 3.16
2674 2719 1.120530 ACGTCAGACAGGGTCAGTTT 58.879 50.000 0.41 0.00 34.60 2.66
2675 2720 1.202533 ACGTCAGACAGGGTCAGTTTG 60.203 52.381 0.41 0.00 34.60 2.93
2676 2721 1.068588 CGTCAGACAGGGTCAGTTTGA 59.931 52.381 0.41 0.00 34.60 2.69
2677 2722 2.289072 CGTCAGACAGGGTCAGTTTGAT 60.289 50.000 0.41 0.00 33.47 2.57
2678 2723 3.744660 GTCAGACAGGGTCAGTTTGATT 58.255 45.455 0.00 0.00 33.47 2.57
2679 2724 3.748568 GTCAGACAGGGTCAGTTTGATTC 59.251 47.826 0.00 0.00 33.47 2.52
2680 2725 2.738846 CAGACAGGGTCAGTTTGATTCG 59.261 50.000 0.00 0.00 34.60 3.34
2681 2726 2.368875 AGACAGGGTCAGTTTGATTCGT 59.631 45.455 0.00 0.00 34.60 3.85
2682 2727 2.480419 GACAGGGTCAGTTTGATTCGTG 59.520 50.000 0.00 0.00 32.09 4.35
2683 2728 2.104111 ACAGGGTCAGTTTGATTCGTGA 59.896 45.455 10.00 0.00 0.00 4.35
2684 2729 2.480419 CAGGGTCAGTTTGATTCGTGAC 59.520 50.000 0.00 0.00 38.89 3.67
2687 2732 3.795561 GTCAGTTTGATTCGTGACCTG 57.204 47.619 0.00 0.00 34.45 4.00
2688 2733 3.390135 GTCAGTTTGATTCGTGACCTGA 58.610 45.455 0.00 0.00 34.45 3.86
2689 2734 3.184581 GTCAGTTTGATTCGTGACCTGAC 59.815 47.826 0.00 0.00 34.45 3.51
2690 2735 2.480419 CAGTTTGATTCGTGACCTGACC 59.520 50.000 0.00 0.00 0.00 4.02
2691 2736 1.804748 GTTTGATTCGTGACCTGACCC 59.195 52.381 0.00 0.00 0.00 4.46
2692 2737 1.348064 TTGATTCGTGACCTGACCCT 58.652 50.000 0.00 0.00 0.00 4.34
2693 2738 0.895530 TGATTCGTGACCTGACCCTC 59.104 55.000 0.00 0.00 0.00 4.30
2694 2739 0.895530 GATTCGTGACCTGACCCTCA 59.104 55.000 0.00 0.00 0.00 3.86
2695 2740 1.482593 GATTCGTGACCTGACCCTCAT 59.517 52.381 0.00 0.00 0.00 2.90
2696 2741 0.608130 TTCGTGACCTGACCCTCATG 59.392 55.000 0.00 0.00 0.00 3.07
2697 2742 0.541998 TCGTGACCTGACCCTCATGT 60.542 55.000 0.00 0.00 0.00 3.21
2698 2743 0.321671 CGTGACCTGACCCTCATGTT 59.678 55.000 0.00 0.00 0.00 2.71
2699 2744 1.270839 CGTGACCTGACCCTCATGTTT 60.271 52.381 0.00 0.00 0.00 2.83
2700 2745 2.154462 GTGACCTGACCCTCATGTTTG 58.846 52.381 0.00 0.00 0.00 2.93
2701 2746 1.073763 TGACCTGACCCTCATGTTTGG 59.926 52.381 0.00 0.00 0.00 3.28
2702 2747 1.351017 GACCTGACCCTCATGTTTGGA 59.649 52.381 5.19 0.00 0.00 3.53
2703 2748 1.995542 ACCTGACCCTCATGTTTGGAT 59.004 47.619 5.19 0.00 0.00 3.41
2704 2749 2.291153 ACCTGACCCTCATGTTTGGATG 60.291 50.000 5.19 0.00 0.00 3.51
2705 2750 2.372264 CTGACCCTCATGTTTGGATGG 58.628 52.381 5.19 0.00 0.00 3.51
2706 2751 1.106285 GACCCTCATGTTTGGATGGC 58.894 55.000 5.19 0.00 0.00 4.40
2707 2752 0.324645 ACCCTCATGTTTGGATGGCC 60.325 55.000 0.00 0.00 0.00 5.36
2708 2753 0.324552 CCCTCATGTTTGGATGGCCA 60.325 55.000 8.56 8.56 44.17 5.36
2709 2754 1.108776 CCTCATGTTTGGATGGCCAG 58.891 55.000 13.05 0.00 46.91 4.85
2710 2755 1.617804 CCTCATGTTTGGATGGCCAGT 60.618 52.381 13.05 0.00 46.91 4.00
2711 2756 2.357050 CCTCATGTTTGGATGGCCAGTA 60.357 50.000 13.05 0.00 46.91 2.74
2712 2757 3.559069 CTCATGTTTGGATGGCCAGTAT 58.441 45.455 13.05 0.00 46.91 2.12
2713 2758 3.956199 CTCATGTTTGGATGGCCAGTATT 59.044 43.478 13.05 0.00 46.91 1.89
2714 2759 3.700539 TCATGTTTGGATGGCCAGTATTG 59.299 43.478 13.05 0.79 46.91 1.90
2715 2760 3.168035 TGTTTGGATGGCCAGTATTGT 57.832 42.857 13.05 0.00 46.91 2.71
2716 2761 3.505386 TGTTTGGATGGCCAGTATTGTT 58.495 40.909 13.05 0.00 46.91 2.83
2717 2762 3.900601 TGTTTGGATGGCCAGTATTGTTT 59.099 39.130 13.05 0.00 46.91 2.83
2718 2763 4.244862 GTTTGGATGGCCAGTATTGTTTG 58.755 43.478 13.05 0.00 46.91 2.93
2719 2764 2.455557 TGGATGGCCAGTATTGTTTGG 58.544 47.619 13.05 0.00 39.92 3.28
2720 2765 2.225242 TGGATGGCCAGTATTGTTTGGT 60.225 45.455 13.05 0.00 39.92 3.67
2721 2766 2.166254 GGATGGCCAGTATTGTTTGGTG 59.834 50.000 13.05 0.00 36.81 4.17
2722 2767 2.373335 TGGCCAGTATTGTTTGGTGT 57.627 45.000 0.00 0.00 36.81 4.16
2723 2768 1.959985 TGGCCAGTATTGTTTGGTGTG 59.040 47.619 0.00 0.00 36.81 3.82
2724 2769 1.272212 GGCCAGTATTGTTTGGTGTGG 59.728 52.381 0.00 0.00 36.81 4.17
2725 2770 2.235016 GCCAGTATTGTTTGGTGTGGA 58.765 47.619 0.00 0.00 36.81 4.02
2726 2771 2.825532 GCCAGTATTGTTTGGTGTGGAT 59.174 45.455 0.00 0.00 36.81 3.41
2727 2772 3.367292 GCCAGTATTGTTTGGTGTGGATG 60.367 47.826 0.00 0.00 36.81 3.51
2728 2773 3.826157 CCAGTATTGTTTGGTGTGGATGT 59.174 43.478 0.00 0.00 0.00 3.06
2729 2774 4.321156 CCAGTATTGTTTGGTGTGGATGTG 60.321 45.833 0.00 0.00 0.00 3.21
2730 2775 4.518590 CAGTATTGTTTGGTGTGGATGTGA 59.481 41.667 0.00 0.00 0.00 3.58
2731 2776 5.009510 CAGTATTGTTTGGTGTGGATGTGAA 59.990 40.000 0.00 0.00 0.00 3.18
2732 2777 5.596361 AGTATTGTTTGGTGTGGATGTGAAA 59.404 36.000 0.00 0.00 0.00 2.69
2733 2778 5.549742 ATTGTTTGGTGTGGATGTGAAAT 57.450 34.783 0.00 0.00 0.00 2.17
2734 2779 4.319139 TGTTTGGTGTGGATGTGAAATG 57.681 40.909 0.00 0.00 0.00 2.32
2735 2780 3.703556 TGTTTGGTGTGGATGTGAAATGT 59.296 39.130 0.00 0.00 0.00 2.71
2736 2781 4.889995 TGTTTGGTGTGGATGTGAAATGTA 59.110 37.500 0.00 0.00 0.00 2.29
2737 2782 5.360999 TGTTTGGTGTGGATGTGAAATGTAA 59.639 36.000 0.00 0.00 0.00 2.41
2738 2783 6.127338 TGTTTGGTGTGGATGTGAAATGTAAA 60.127 34.615 0.00 0.00 0.00 2.01
2739 2784 6.471233 TTGGTGTGGATGTGAAATGTAAAA 57.529 33.333 0.00 0.00 0.00 1.52
2740 2785 6.662865 TGGTGTGGATGTGAAATGTAAAAT 57.337 33.333 0.00 0.00 0.00 1.82
2741 2786 7.767250 TGGTGTGGATGTGAAATGTAAAATA 57.233 32.000 0.00 0.00 0.00 1.40
2742 2787 8.359875 TGGTGTGGATGTGAAATGTAAAATAT 57.640 30.769 0.00 0.00 0.00 1.28
2743 2788 8.811017 TGGTGTGGATGTGAAATGTAAAATATT 58.189 29.630 0.00 0.00 0.00 1.28
2744 2789 9.651913 GGTGTGGATGTGAAATGTAAAATATTT 57.348 29.630 0.00 0.00 0.00 1.40
2748 2793 9.585099 TGGATGTGAAATGTAAAATATTTCTGC 57.415 29.630 0.10 0.00 42.31 4.26
2749 2794 9.034544 GGATGTGAAATGTAAAATATTTCTGCC 57.965 33.333 0.10 4.78 42.31 4.85
2750 2795 9.807649 GATGTGAAATGTAAAATATTTCTGCCT 57.192 29.630 0.10 0.00 42.31 4.75
2751 2796 8.984891 TGTGAAATGTAAAATATTTCTGCCTG 57.015 30.769 0.10 0.00 42.31 4.85
2752 2797 8.034215 TGTGAAATGTAAAATATTTCTGCCTGG 58.966 33.333 0.10 0.00 42.31 4.45
2753 2798 7.010460 GTGAAATGTAAAATATTTCTGCCTGGC 59.990 37.037 12.87 12.87 42.31 4.85
2754 2799 6.796785 AATGTAAAATATTTCTGCCTGGCT 57.203 33.333 21.03 0.83 0.00 4.75
2755 2800 7.896383 AATGTAAAATATTTCTGCCTGGCTA 57.104 32.000 21.03 5.14 0.00 3.93
2756 2801 6.942532 TGTAAAATATTTCTGCCTGGCTAG 57.057 37.500 21.03 15.05 0.00 3.42
2765 2810 4.308526 CCTGGCTAGGCTTGTGTG 57.691 61.111 18.18 1.15 37.25 3.82
2766 2811 1.679311 CCTGGCTAGGCTTGTGTGA 59.321 57.895 18.18 0.00 37.25 3.58
2767 2812 0.254178 CCTGGCTAGGCTTGTGTGAT 59.746 55.000 18.18 0.00 37.25 3.06
2768 2813 1.661341 CTGGCTAGGCTTGTGTGATC 58.339 55.000 18.18 0.00 0.00 2.92
2769 2814 1.209019 CTGGCTAGGCTTGTGTGATCT 59.791 52.381 18.18 0.00 0.00 2.75
2770 2815 1.065926 TGGCTAGGCTTGTGTGATCTG 60.066 52.381 18.18 0.00 0.00 2.90
2771 2816 1.208052 GGCTAGGCTTGTGTGATCTGA 59.792 52.381 9.46 0.00 0.00 3.27
2772 2817 2.355108 GGCTAGGCTTGTGTGATCTGAA 60.355 50.000 9.46 0.00 0.00 3.02
2773 2818 3.539604 GCTAGGCTTGTGTGATCTGAAT 58.460 45.455 0.00 0.00 0.00 2.57
2774 2819 3.559242 GCTAGGCTTGTGTGATCTGAATC 59.441 47.826 0.00 0.00 0.00 2.52
2775 2820 2.625737 AGGCTTGTGTGATCTGAATCG 58.374 47.619 0.00 0.00 34.39 3.34
2776 2821 2.027745 AGGCTTGTGTGATCTGAATCGT 60.028 45.455 0.00 0.00 34.39 3.73
2777 2822 2.744202 GGCTTGTGTGATCTGAATCGTT 59.256 45.455 0.00 0.00 34.39 3.85
2778 2823 3.189287 GGCTTGTGTGATCTGAATCGTTT 59.811 43.478 0.00 0.00 34.39 3.60
2779 2824 4.153986 GCTTGTGTGATCTGAATCGTTTG 58.846 43.478 0.00 0.00 34.39 2.93
2780 2825 4.715896 CTTGTGTGATCTGAATCGTTTGG 58.284 43.478 0.00 0.00 34.39 3.28
2781 2826 3.738982 TGTGTGATCTGAATCGTTTGGT 58.261 40.909 0.00 0.00 34.39 3.67
2782 2827 4.133820 TGTGTGATCTGAATCGTTTGGTT 58.866 39.130 0.00 0.00 34.39 3.67
2783 2828 4.213270 TGTGTGATCTGAATCGTTTGGTTC 59.787 41.667 0.00 0.00 34.39 3.62
2784 2829 4.213270 GTGTGATCTGAATCGTTTGGTTCA 59.787 41.667 0.00 0.00 34.39 3.18
2785 2830 5.003160 TGTGATCTGAATCGTTTGGTTCAT 58.997 37.500 0.00 0.00 34.18 2.57
2786 2831 5.106594 TGTGATCTGAATCGTTTGGTTCATG 60.107 40.000 0.00 0.00 34.18 3.07
2787 2832 3.829886 TCTGAATCGTTTGGTTCATGC 57.170 42.857 0.00 0.00 34.18 4.06
2788 2833 2.487762 TCTGAATCGTTTGGTTCATGCC 59.512 45.455 0.00 0.00 34.18 4.40
2789 2834 2.489329 CTGAATCGTTTGGTTCATGCCT 59.511 45.455 0.00 0.00 34.18 4.75
2790 2835 2.228582 TGAATCGTTTGGTTCATGCCTG 59.771 45.455 0.00 0.00 29.93 4.85
2791 2836 1.176527 ATCGTTTGGTTCATGCCTGG 58.823 50.000 0.00 0.00 0.00 4.45
2792 2837 0.109532 TCGTTTGGTTCATGCCTGGA 59.890 50.000 0.00 0.00 0.00 3.86
2793 2838 0.240945 CGTTTGGTTCATGCCTGGAC 59.759 55.000 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.777213 TGGTTGTCTTTTAGTTTGCCTTTA 57.223 33.333 0.00 0.00 0.00 1.85
2 3 5.669164 TGGTTGTCTTTTAGTTTGCCTTT 57.331 34.783 0.00 0.00 0.00 3.11
4 5 5.869649 AATGGTTGTCTTTTAGTTTGCCT 57.130 34.783 0.00 0.00 0.00 4.75
5 6 5.277297 GCAAATGGTTGTCTTTTAGTTTGCC 60.277 40.000 7.94 0.00 42.39 4.52
6 7 5.523552 AGCAAATGGTTGTCTTTTAGTTTGC 59.476 36.000 10.49 10.49 46.17 3.68
7 8 8.641499 TTAGCAAATGGTTGTCTTTTAGTTTG 57.359 30.769 0.00 0.00 37.06 2.93
9 10 9.908152 GTATTAGCAAATGGTTGTCTTTTAGTT 57.092 29.630 0.00 0.00 37.06 2.24
10 11 9.073475 TGTATTAGCAAATGGTTGTCTTTTAGT 57.927 29.630 0.00 0.00 37.06 2.24
11 12 9.906660 TTGTATTAGCAAATGGTTGTCTTTTAG 57.093 29.630 0.00 0.00 37.06 1.85
12 13 9.906660 CTTGTATTAGCAAATGGTTGTCTTTTA 57.093 29.630 0.00 0.00 37.06 1.52
13 14 8.637986 TCTTGTATTAGCAAATGGTTGTCTTTT 58.362 29.630 0.00 0.00 37.06 2.27
14 15 8.177119 TCTTGTATTAGCAAATGGTTGTCTTT 57.823 30.769 0.00 0.00 37.06 2.52
15 16 7.759489 TCTTGTATTAGCAAATGGTTGTCTT 57.241 32.000 0.00 0.00 37.06 3.01
16 17 7.944729 ATCTTGTATTAGCAAATGGTTGTCT 57.055 32.000 0.00 0.00 37.06 3.41
34 35 9.339850 TCTACGAACTAGCTAGAATAATCTTGT 57.660 33.333 27.45 12.87 37.10 3.16
37 38 9.953565 AGATCTACGAACTAGCTAGAATAATCT 57.046 33.333 27.45 18.69 39.82 2.40
39 40 9.727859 TGAGATCTACGAACTAGCTAGAATAAT 57.272 33.333 27.45 10.49 0.00 1.28
40 41 9.557061 TTGAGATCTACGAACTAGCTAGAATAA 57.443 33.333 27.45 7.45 0.00 1.40
41 42 9.557061 TTTGAGATCTACGAACTAGCTAGAATA 57.443 33.333 27.45 11.66 0.00 1.75
42 43 8.453238 TTTGAGATCTACGAACTAGCTAGAAT 57.547 34.615 27.45 14.95 0.00 2.40
43 44 7.860918 TTTGAGATCTACGAACTAGCTAGAA 57.139 36.000 27.45 3.26 0.00 2.10
44 45 8.453238 AATTTGAGATCTACGAACTAGCTAGA 57.547 34.615 27.45 5.05 0.00 2.43
45 46 9.522804 AAAATTTGAGATCTACGAACTAGCTAG 57.477 33.333 19.44 19.44 0.00 3.42
46 47 9.517609 GAAAATTTGAGATCTACGAACTAGCTA 57.482 33.333 0.00 0.00 0.00 3.32
47 48 8.035394 TGAAAATTTGAGATCTACGAACTAGCT 58.965 33.333 0.00 0.00 0.00 3.32
48 49 8.186178 TGAAAATTTGAGATCTACGAACTAGC 57.814 34.615 0.00 0.00 0.00 3.42
51 52 8.877779 CAGATGAAAATTTGAGATCTACGAACT 58.122 33.333 0.00 0.00 0.00 3.01
52 53 8.873830 TCAGATGAAAATTTGAGATCTACGAAC 58.126 33.333 0.00 0.00 0.00 3.95
53 54 8.873830 GTCAGATGAAAATTTGAGATCTACGAA 58.126 33.333 0.00 0.00 0.00 3.85
54 55 8.034804 TGTCAGATGAAAATTTGAGATCTACGA 58.965 33.333 0.00 0.00 0.00 3.43
55 56 8.189709 TGTCAGATGAAAATTTGAGATCTACG 57.810 34.615 0.00 0.00 0.00 3.51
71 72 8.843262 CCAATGCTAGAAAATATTGTCAGATGA 58.157 33.333 8.36 0.00 0.00 2.92
72 73 7.594015 GCCAATGCTAGAAAATATTGTCAGATG 59.406 37.037 8.36 4.60 33.53 2.90
73 74 7.286087 TGCCAATGCTAGAAAATATTGTCAGAT 59.714 33.333 8.36 0.00 38.71 2.90
74 75 6.602803 TGCCAATGCTAGAAAATATTGTCAGA 59.397 34.615 8.36 0.00 38.71 3.27
75 76 6.798482 TGCCAATGCTAGAAAATATTGTCAG 58.202 36.000 8.36 4.92 38.71 3.51
76 77 6.772360 TGCCAATGCTAGAAAATATTGTCA 57.228 33.333 8.36 0.00 38.71 3.58
77 78 8.652810 AAATGCCAATGCTAGAAAATATTGTC 57.347 30.769 0.00 0.00 38.71 3.18
78 79 8.259411 TGAAATGCCAATGCTAGAAAATATTGT 58.741 29.630 0.00 0.00 38.71 2.71
79 80 8.651391 TGAAATGCCAATGCTAGAAAATATTG 57.349 30.769 0.00 0.00 38.71 1.90
83 84 7.811236 CGATATGAAATGCCAATGCTAGAAAAT 59.189 33.333 0.00 0.00 38.71 1.82
84 85 7.140705 CGATATGAAATGCCAATGCTAGAAAA 58.859 34.615 0.00 0.00 38.71 2.29
85 86 6.262944 ACGATATGAAATGCCAATGCTAGAAA 59.737 34.615 0.00 0.00 38.71 2.52
86 87 5.764686 ACGATATGAAATGCCAATGCTAGAA 59.235 36.000 0.00 0.00 38.71 2.10
87 88 5.308014 ACGATATGAAATGCCAATGCTAGA 58.692 37.500 0.00 0.00 38.71 2.43
88 89 5.618056 ACGATATGAAATGCCAATGCTAG 57.382 39.130 0.00 0.00 38.71 3.42
89 90 7.686438 AATACGATATGAAATGCCAATGCTA 57.314 32.000 0.00 0.00 38.71 3.49
90 91 6.579666 AATACGATATGAAATGCCAATGCT 57.420 33.333 0.00 0.00 38.71 3.79
91 92 6.862608 TGAAATACGATATGAAATGCCAATGC 59.137 34.615 0.00 0.00 38.26 3.56
92 93 8.800231 TTGAAATACGATATGAAATGCCAATG 57.200 30.769 0.00 0.00 0.00 2.82
93 94 9.985730 ATTTGAAATACGATATGAAATGCCAAT 57.014 25.926 0.00 0.00 0.00 3.16
94 95 9.814899 AATTTGAAATACGATATGAAATGCCAA 57.185 25.926 0.00 0.00 0.00 4.52
95 96 9.247126 CAATTTGAAATACGATATGAAATGCCA 57.753 29.630 0.00 0.00 0.00 4.92
96 97 9.248291 ACAATTTGAAATACGATATGAAATGCC 57.752 29.630 2.79 0.00 0.00 4.40
113 114 9.360093 ACGAAGTTAACAATCAAACAATTTGAA 57.640 25.926 8.61 0.00 46.93 2.69
134 135 2.060326 TACACGCCAAGAAGACGAAG 57.940 50.000 0.00 0.00 0.00 3.79
135 136 2.288579 ACATACACGCCAAGAAGACGAA 60.289 45.455 0.00 0.00 0.00 3.85
136 137 1.271379 ACATACACGCCAAGAAGACGA 59.729 47.619 0.00 0.00 0.00 4.20
137 138 1.390123 CACATACACGCCAAGAAGACG 59.610 52.381 0.00 0.00 0.00 4.18
138 139 1.732259 CCACATACACGCCAAGAAGAC 59.268 52.381 0.00 0.00 0.00 3.01
139 140 1.621317 TCCACATACACGCCAAGAAGA 59.379 47.619 0.00 0.00 0.00 2.87
140 141 2.093306 TCCACATACACGCCAAGAAG 57.907 50.000 0.00 0.00 0.00 2.85
141 142 2.552599 TTCCACATACACGCCAAGAA 57.447 45.000 0.00 0.00 0.00 2.52
142 143 2.746904 CAATTCCACATACACGCCAAGA 59.253 45.455 0.00 0.00 0.00 3.02
143 144 2.487762 ACAATTCCACATACACGCCAAG 59.512 45.455 0.00 0.00 0.00 3.61
144 145 2.509569 ACAATTCCACATACACGCCAA 58.490 42.857 0.00 0.00 0.00 4.52
145 146 2.192664 ACAATTCCACATACACGCCA 57.807 45.000 0.00 0.00 0.00 5.69
146 147 2.486203 TCAACAATTCCACATACACGCC 59.514 45.455 0.00 0.00 0.00 5.68
147 148 3.488489 GTCAACAATTCCACATACACGC 58.512 45.455 0.00 0.00 0.00 5.34
148 149 3.500299 TGGTCAACAATTCCACATACACG 59.500 43.478 0.00 0.00 0.00 4.49
149 150 5.446143 TTGGTCAACAATTCCACATACAC 57.554 39.130 0.00 0.00 33.18 2.90
158 159 9.872362 AGCATGGCTAACATTGGTCAACAATTC 62.872 40.741 0.00 0.00 41.42 2.17
159 160 8.202543 AGCATGGCTAACATTGGTCAACAATT 62.203 38.462 0.00 0.00 41.42 2.32
160 161 6.796646 AGCATGGCTAACATTGGTCAACAAT 61.797 40.000 0.00 0.00 43.53 2.71
161 162 3.305950 GCATGGCTAACATTGGTCAACAA 60.306 43.478 0.00 0.00 44.54 2.83
162 163 2.230992 GCATGGCTAACATTGGTCAACA 59.769 45.455 0.00 0.00 37.84 3.33
163 164 2.493278 AGCATGGCTAACATTGGTCAAC 59.507 45.455 0.00 0.00 37.84 3.18
164 165 2.492881 CAGCATGGCTAACATTGGTCAA 59.507 45.455 0.00 0.00 37.84 3.18
165 166 2.093890 CAGCATGGCTAACATTGGTCA 58.906 47.619 0.00 0.00 37.84 4.02
166 167 1.202336 GCAGCATGGCTAACATTGGTC 60.202 52.381 0.00 0.00 37.84 4.02
167 168 0.819582 GCAGCATGGCTAACATTGGT 59.180 50.000 0.00 0.00 37.84 3.67
168 169 0.818938 TGCAGCATGGCTAACATTGG 59.181 50.000 0.00 0.00 37.84 3.16
169 170 1.801395 GCTGCAGCATGGCTAACATTG 60.801 52.381 33.36 0.00 37.84 2.82
170 171 0.458669 GCTGCAGCATGGCTAACATT 59.541 50.000 33.36 0.00 37.84 2.71
171 172 0.395311 AGCTGCAGCATGGCTAACAT 60.395 50.000 38.24 12.75 45.16 2.71
172 173 1.001764 AGCTGCAGCATGGCTAACA 60.002 52.632 38.24 0.00 45.16 2.41
173 174 1.432251 CAGCTGCAGCATGGCTAAC 59.568 57.895 38.24 7.79 45.16 2.34
174 175 2.412323 GCAGCTGCAGCATGGCTAA 61.412 57.895 38.24 0.00 45.16 3.09
175 176 2.827190 GCAGCTGCAGCATGGCTA 60.827 61.111 38.24 0.00 45.16 3.93
204 205 3.699038 AGCTTTGCCTAGACACACAAAAA 59.301 39.130 0.00 0.00 32.09 1.94
205 206 3.287222 AGCTTTGCCTAGACACACAAAA 58.713 40.909 0.00 0.00 32.09 2.44
206 207 2.930950 AGCTTTGCCTAGACACACAAA 58.069 42.857 0.00 0.00 0.00 2.83
207 208 2.638480 AGCTTTGCCTAGACACACAA 57.362 45.000 0.00 0.00 0.00 3.33
208 209 3.762407 TTAGCTTTGCCTAGACACACA 57.238 42.857 0.00 0.00 0.00 3.72
209 210 4.672801 GCATTTAGCTTTGCCTAGACACAC 60.673 45.833 0.00 0.00 41.15 3.82
210 211 3.440173 GCATTTAGCTTTGCCTAGACACA 59.560 43.478 0.00 0.00 41.15 3.72
211 212 3.485877 CGCATTTAGCTTTGCCTAGACAC 60.486 47.826 0.00 0.00 42.61 3.67
212 213 2.677836 CGCATTTAGCTTTGCCTAGACA 59.322 45.455 0.00 0.00 42.61 3.41
213 214 2.936498 TCGCATTTAGCTTTGCCTAGAC 59.064 45.455 0.00 0.00 42.61 2.59
214 215 3.260475 TCGCATTTAGCTTTGCCTAGA 57.740 42.857 0.00 0.00 42.61 2.43
215 216 4.035558 TCATTCGCATTTAGCTTTGCCTAG 59.964 41.667 0.00 0.00 42.61 3.02
216 217 3.944650 TCATTCGCATTTAGCTTTGCCTA 59.055 39.130 0.00 0.00 42.61 3.93
217 218 2.754552 TCATTCGCATTTAGCTTTGCCT 59.245 40.909 0.00 0.00 42.61 4.75
218 219 3.149436 TCATTCGCATTTAGCTTTGCC 57.851 42.857 0.00 0.00 42.61 4.52
219 220 5.514279 AGTATCATTCGCATTTAGCTTTGC 58.486 37.500 0.00 0.00 42.61 3.68
220 221 7.188834 TGAAGTATCATTCGCATTTAGCTTTG 58.811 34.615 0.00 0.00 42.61 2.77
221 222 7.320443 TGAAGTATCATTCGCATTTAGCTTT 57.680 32.000 0.00 0.00 42.61 3.51
222 223 6.925610 TGAAGTATCATTCGCATTTAGCTT 57.074 33.333 0.00 0.00 42.61 3.74
223 224 6.925610 TTGAAGTATCATTCGCATTTAGCT 57.074 33.333 0.00 0.00 36.84 3.32
249 250 9.204337 TGCCTCACATACTACCTTATAGTTTTA 57.796 33.333 0.00 0.00 0.00 1.52
250 251 7.985752 GTGCCTCACATACTACCTTATAGTTTT 59.014 37.037 0.00 0.00 34.08 2.43
251 252 7.125204 TGTGCCTCACATACTACCTTATAGTTT 59.875 37.037 0.00 0.00 39.62 2.66
252 253 6.610020 TGTGCCTCACATACTACCTTATAGTT 59.390 38.462 0.00 0.00 39.62 2.24
253 254 6.134055 TGTGCCTCACATACTACCTTATAGT 58.866 40.000 0.00 0.00 39.62 2.12
254 255 6.650427 TGTGCCTCACATACTACCTTATAG 57.350 41.667 0.00 0.00 39.62 1.31
255 256 7.426606 TTTGTGCCTCACATACTACCTTATA 57.573 36.000 0.11 0.00 44.16 0.98
256 257 5.950544 TTGTGCCTCACATACTACCTTAT 57.049 39.130 0.11 0.00 44.16 1.73
257 258 5.748670 TTTGTGCCTCACATACTACCTTA 57.251 39.130 0.11 0.00 44.16 2.69
258 259 4.634012 TTTGTGCCTCACATACTACCTT 57.366 40.909 0.11 0.00 44.16 3.50
259 260 4.634012 TTTTGTGCCTCACATACTACCT 57.366 40.909 0.11 0.00 44.16 3.08
278 279 3.578688 GCGATGAAGCCAGAATGTTTTT 58.421 40.909 0.00 0.00 0.00 1.94
279 280 3.221964 GCGATGAAGCCAGAATGTTTT 57.778 42.857 0.00 0.00 0.00 2.43
280 281 2.927553 GCGATGAAGCCAGAATGTTT 57.072 45.000 0.00 0.00 0.00 2.83
290 291 2.974698 CGGGGATGGCGATGAAGC 60.975 66.667 0.00 0.00 0.00 3.86
291 292 2.974698 GCGGGGATGGCGATGAAG 60.975 66.667 0.00 0.00 0.00 3.02
292 293 4.562425 GGCGGGGATGGCGATGAA 62.562 66.667 0.00 0.00 0.00 2.57
301 302 4.892291 ATACACGGGGGCGGGGAT 62.892 66.667 0.00 0.00 0.00 3.85
305 306 3.515316 CTAGCATACACGGGGGCGG 62.515 68.421 0.00 0.00 0.00 6.13
306 307 2.029073 CTAGCATACACGGGGGCG 59.971 66.667 0.00 0.00 0.00 6.13
307 308 2.280865 GCTAGCATACACGGGGGC 60.281 66.667 10.63 0.00 0.00 5.80
308 309 1.069765 CTGCTAGCATACACGGGGG 59.930 63.158 19.72 0.00 0.00 5.40
309 310 0.464036 TTCTGCTAGCATACACGGGG 59.536 55.000 19.72 3.75 0.00 5.73
310 311 1.409064 TCTTCTGCTAGCATACACGGG 59.591 52.381 19.72 4.57 0.00 5.28
311 312 2.871182 TCTTCTGCTAGCATACACGG 57.129 50.000 19.72 5.38 0.00 4.94
312 313 4.230657 GGTATCTTCTGCTAGCATACACG 58.769 47.826 19.72 6.19 0.00 4.49
313 314 4.985409 GTGGTATCTTCTGCTAGCATACAC 59.015 45.833 19.72 10.30 0.00 2.90
314 315 4.039245 GGTGGTATCTTCTGCTAGCATACA 59.961 45.833 19.72 2.13 0.00 2.29
315 316 4.039245 TGGTGGTATCTTCTGCTAGCATAC 59.961 45.833 19.72 16.50 0.00 2.39
316 317 4.223144 TGGTGGTATCTTCTGCTAGCATA 58.777 43.478 19.72 8.56 0.00 3.14
317 318 3.041211 TGGTGGTATCTTCTGCTAGCAT 58.959 45.455 19.72 5.32 0.00 3.79
318 319 2.432146 CTGGTGGTATCTTCTGCTAGCA 59.568 50.000 18.22 18.22 0.00 3.49
319 320 2.432510 ACTGGTGGTATCTTCTGCTAGC 59.567 50.000 8.10 8.10 0.00 3.42
320 321 4.261825 GCTACTGGTGGTATCTTCTGCTAG 60.262 50.000 0.00 0.00 0.00 3.42
321 322 3.637229 GCTACTGGTGGTATCTTCTGCTA 59.363 47.826 0.00 0.00 0.00 3.49
322 323 2.432510 GCTACTGGTGGTATCTTCTGCT 59.567 50.000 0.00 0.00 0.00 4.24
323 324 2.168521 TGCTACTGGTGGTATCTTCTGC 59.831 50.000 0.00 0.00 0.00 4.26
324 325 4.471904 TTGCTACTGGTGGTATCTTCTG 57.528 45.455 0.00 0.00 0.00 3.02
325 326 5.431765 CAATTGCTACTGGTGGTATCTTCT 58.568 41.667 0.00 0.00 0.00 2.85
326 327 4.576463 CCAATTGCTACTGGTGGTATCTTC 59.424 45.833 0.00 0.00 0.00 2.87
327 328 4.526970 CCAATTGCTACTGGTGGTATCTT 58.473 43.478 0.00 0.00 0.00 2.40
436 438 2.785681 GCATGAAAATGTGAGCGACTCG 60.786 50.000 0.00 0.00 32.35 4.18
437 439 2.160219 TGCATGAAAATGTGAGCGACTC 59.840 45.455 0.00 0.00 0.00 3.36
438 440 2.153645 TGCATGAAAATGTGAGCGACT 58.846 42.857 0.00 0.00 0.00 4.18
439 441 2.617250 TGCATGAAAATGTGAGCGAC 57.383 45.000 0.00 0.00 0.00 5.19
440 442 5.503662 AATATGCATGAAAATGTGAGCGA 57.496 34.783 10.16 0.00 0.00 4.93
441 443 7.682593 TTAAATATGCATGAAAATGTGAGCG 57.317 32.000 10.16 0.00 0.00 5.03
460 462 9.755064 CGACATCTACTCGTTTGAAAATTAAAT 57.245 29.630 0.00 0.00 0.00 1.40
461 463 8.225107 CCGACATCTACTCGTTTGAAAATTAAA 58.775 33.333 0.00 0.00 0.00 1.52
462 464 7.622672 GCCGACATCTACTCGTTTGAAAATTAA 60.623 37.037 0.00 0.00 0.00 1.40
463 465 6.183360 GCCGACATCTACTCGTTTGAAAATTA 60.183 38.462 0.00 0.00 0.00 1.40
464 466 5.390567 GCCGACATCTACTCGTTTGAAAATT 60.391 40.000 0.00 0.00 0.00 1.82
465 467 4.092968 GCCGACATCTACTCGTTTGAAAAT 59.907 41.667 0.00 0.00 0.00 1.82
466 468 3.430895 GCCGACATCTACTCGTTTGAAAA 59.569 43.478 0.00 0.00 0.00 2.29
467 469 2.991190 GCCGACATCTACTCGTTTGAAA 59.009 45.455 0.00 0.00 0.00 2.69
468 470 2.602878 GCCGACATCTACTCGTTTGAA 58.397 47.619 0.00 0.00 0.00 2.69
469 471 1.135199 GGCCGACATCTACTCGTTTGA 60.135 52.381 0.00 0.00 0.00 2.69
470 472 1.278238 GGCCGACATCTACTCGTTTG 58.722 55.000 0.00 0.00 0.00 2.93
471 473 0.892755 TGGCCGACATCTACTCGTTT 59.107 50.000 0.00 0.00 0.00 3.60
472 474 0.172803 GTGGCCGACATCTACTCGTT 59.827 55.000 0.00 0.00 0.00 3.85
746 765 1.620323 GGAGCTTGGGATTTTTGCAGT 59.380 47.619 0.00 0.00 0.00 4.40
886 905 2.960129 CGCGGCGCTTAAGTAGGG 60.960 66.667 30.54 6.78 39.69 3.53
1813 1843 0.246635 TGAAGTTGTCGGCCTAGAGC 59.753 55.000 0.00 0.00 42.60 4.09
2030 2060 6.983984 AGGTTCAGAGAGACAAGTAGTTAAC 58.016 40.000 0.00 0.00 0.00 2.01
2037 2067 3.838565 TGAGAGGTTCAGAGAGACAAGT 58.161 45.455 0.00 0.00 0.00 3.16
2042 2072 4.411013 TGACATTGAGAGGTTCAGAGAGA 58.589 43.478 0.00 0.00 37.07 3.10
2043 2073 4.797800 TGACATTGAGAGGTTCAGAGAG 57.202 45.455 0.00 0.00 37.07 3.20
2057 2088 5.740569 CAGACAACTTCAGTGTTTGACATTG 59.259 40.000 8.31 0.00 37.20 2.82
2067 2098 9.390795 CAGAAAATTATTCAGACAACTTCAGTG 57.609 33.333 0.00 0.00 0.00 3.66
2086 2117 4.916183 AGCTGCTAGGACTTTCAGAAAAT 58.084 39.130 0.00 0.00 0.00 1.82
2101 2132 9.448438 TTCTGAATTTGAATACTTTAGCTGCTA 57.552 29.630 5.02 5.02 0.00 3.49
2133 2164 9.431690 TTGAAATGGATTATGGATGGTATGAAA 57.568 29.630 0.00 0.00 0.00 2.69
2148 2179 6.944290 TGAGTTGATCAGTCTTGAAATGGATT 59.056 34.615 0.00 0.00 36.78 3.01
2223 2255 0.897621 GCAGGAAACCCCAGATTTGG 59.102 55.000 0.00 0.00 44.60 3.28
2254 2291 7.661968 AGTCCTAGCTTTCCATTTTTCTTTTC 58.338 34.615 0.00 0.00 0.00 2.29
2259 2296 6.403746 GCACTAGTCCTAGCTTTCCATTTTTC 60.404 42.308 0.00 0.00 36.66 2.29
2260 2297 5.416013 GCACTAGTCCTAGCTTTCCATTTTT 59.584 40.000 0.00 0.00 36.66 1.94
2261 2298 4.944317 GCACTAGTCCTAGCTTTCCATTTT 59.056 41.667 0.00 0.00 36.66 1.82
2262 2299 4.019321 TGCACTAGTCCTAGCTTTCCATTT 60.019 41.667 0.00 0.00 36.66 2.32
2263 2300 3.519510 TGCACTAGTCCTAGCTTTCCATT 59.480 43.478 0.00 0.00 36.66 3.16
2264 2301 3.107601 TGCACTAGTCCTAGCTTTCCAT 58.892 45.455 0.00 0.00 36.66 3.41
2313 2350 5.024133 GCCGGTAGCACAGTACGTAGTAA 62.024 52.174 1.90 0.00 43.67 2.24
2314 2351 2.279741 CCGGTAGCACAGTACGTAGTA 58.720 52.381 1.81 0.00 45.11 1.82
2315 2352 2.876097 GCCGGTAGCACAGTACGTAGT 61.876 57.143 1.90 0.00 43.93 2.73
2316 2353 0.248377 GCCGGTAGCACAGTACGTAG 60.248 60.000 1.90 0.00 42.97 3.51
2320 2357 0.739813 CAAGGCCGGTAGCACAGTAC 60.740 60.000 1.90 0.00 46.50 2.73
2346 2383 1.995542 AGGAACACCATTCCCATGACT 59.004 47.619 0.00 0.00 39.39 3.41
2354 2391 1.197721 CGAACAGCAGGAACACCATTC 59.802 52.381 0.00 0.00 0.00 2.67
2374 2411 5.413309 TGGAAGAGAAGATCCAGAGAAAC 57.587 43.478 0.00 0.00 40.74 2.78
2416 2461 4.090588 CTCCCGGCGCCTAACCAA 62.091 66.667 26.68 2.67 0.00 3.67
2476 2521 1.153127 AAAAAGACCCACCGCGTCA 60.153 52.632 4.92 0.00 32.41 4.35
2480 2525 1.471287 GGTATCAAAAAGACCCACCGC 59.529 52.381 0.00 0.00 0.00 5.68
2486 2531 6.490381 AGAAGAGTTTGGGTATCAAAAAGACC 59.510 38.462 0.00 0.00 45.74 3.85
2487 2532 7.511959 AGAAGAGTTTGGGTATCAAAAAGAC 57.488 36.000 0.00 0.00 45.74 3.01
2488 2533 8.413229 CAAAGAAGAGTTTGGGTATCAAAAAGA 58.587 33.333 0.00 0.00 45.74 2.52
2489 2534 8.579682 CAAAGAAGAGTTTGGGTATCAAAAAG 57.420 34.615 0.00 0.00 45.74 2.27
2501 2546 0.385974 CGGCGCCAAAGAAGAGTTTG 60.386 55.000 28.98 0.12 37.20 2.93
2502 2547 1.515521 CCGGCGCCAAAGAAGAGTTT 61.516 55.000 28.98 0.00 0.00 2.66
2503 2548 1.966451 CCGGCGCCAAAGAAGAGTT 60.966 57.895 28.98 0.00 0.00 3.01
2504 2549 2.358737 CCGGCGCCAAAGAAGAGT 60.359 61.111 28.98 0.00 0.00 3.24
2505 2550 3.804193 GCCGGCGCCAAAGAAGAG 61.804 66.667 28.98 7.02 0.00 2.85
2524 2569 2.195123 GAAAATCACCCACACGCCGG 62.195 60.000 0.00 0.00 0.00 6.13
2525 2570 1.209127 GAAAATCACCCACACGCCG 59.791 57.895 0.00 0.00 0.00 6.46
2526 2571 1.209127 CGAAAATCACCCACACGCC 59.791 57.895 0.00 0.00 0.00 5.68
2527 2572 1.209127 CCGAAAATCACCCACACGC 59.791 57.895 0.00 0.00 0.00 5.34
2528 2573 1.209127 GCCGAAAATCACCCACACG 59.791 57.895 0.00 0.00 0.00 4.49
2529 2574 1.209127 CGCCGAAAATCACCCACAC 59.791 57.895 0.00 0.00 0.00 3.82
2530 2575 2.622011 GCGCCGAAAATCACCCACA 61.622 57.895 0.00 0.00 0.00 4.17
2531 2576 2.178273 GCGCCGAAAATCACCCAC 59.822 61.111 0.00 0.00 0.00 4.61
2532 2577 2.033448 AGCGCCGAAAATCACCCA 59.967 55.556 2.29 0.00 0.00 4.51
2533 2578 1.582610 TTCAGCGCCGAAAATCACCC 61.583 55.000 2.29 0.00 0.00 4.61
2534 2579 0.239879 TTTCAGCGCCGAAAATCACC 59.760 50.000 16.15 0.00 32.05 4.02
2535 2580 1.978782 CTTTTCAGCGCCGAAAATCAC 59.021 47.619 26.80 0.00 42.39 3.06
2536 2581 1.665735 GCTTTTCAGCGCCGAAAATCA 60.666 47.619 26.80 9.83 42.39 2.57
2537 2582 0.984829 GCTTTTCAGCGCCGAAAATC 59.015 50.000 26.80 20.71 42.39 2.17
2538 2583 3.107017 GCTTTTCAGCGCCGAAAAT 57.893 47.368 26.80 0.00 42.39 1.82
2539 2584 4.626225 GCTTTTCAGCGCCGAAAA 57.374 50.000 25.45 25.45 41.40 2.29
2567 2612 3.848347 CTCGCCCCATCGATGACCG 62.848 68.421 26.86 22.32 37.87 4.79
2568 2613 2.029666 CTCGCCCCATCGATGACC 59.970 66.667 26.86 12.52 37.87 4.02
2569 2614 2.029666 CCTCGCCCCATCGATGAC 59.970 66.667 26.86 13.98 37.87 3.06
2570 2615 3.233980 CCCTCGCCCCATCGATGA 61.234 66.667 26.86 5.24 37.87 2.92
2571 2616 2.721971 CTTCCCTCGCCCCATCGATG 62.722 65.000 18.76 18.76 37.87 3.84
2572 2617 2.445845 TTCCCTCGCCCCATCGAT 60.446 61.111 0.00 0.00 37.87 3.59
2573 2618 3.154473 CTTCCCTCGCCCCATCGA 61.154 66.667 0.00 0.00 36.94 3.59
2574 2619 4.241555 CCTTCCCTCGCCCCATCG 62.242 72.222 0.00 0.00 0.00 3.84
2575 2620 3.878667 CCCTTCCCTCGCCCCATC 61.879 72.222 0.00 0.00 0.00 3.51
2588 2633 3.794149 ATAGCTAGCCCGGCCCCTT 62.794 63.158 12.13 0.00 0.00 3.95
2589 2634 3.794149 AATAGCTAGCCCGGCCCCT 62.794 63.158 12.13 2.47 0.00 4.79
2590 2635 3.249961 AATAGCTAGCCCGGCCCC 61.250 66.667 12.13 0.00 0.00 5.80
2591 2636 2.347866 GAATAGCTAGCCCGGCCC 59.652 66.667 12.13 0.00 0.00 5.80
2592 2637 2.347866 GGAATAGCTAGCCCGGCC 59.652 66.667 12.13 4.76 0.00 6.13
2593 2638 2.048127 CGGAATAGCTAGCCCGGC 60.048 66.667 22.06 0.00 38.42 6.13
2595 2640 2.048127 GCCGGAATAGCTAGCCCG 60.048 66.667 22.57 22.57 41.47 6.13
2596 2641 2.347866 GGCCGGAATAGCTAGCCC 59.652 66.667 12.13 4.21 37.66 5.19
2597 2642 2.048127 CGGCCGGAATAGCTAGCC 60.048 66.667 20.10 10.24 40.33 3.93
2598 2643 2.048127 CCGGCCGGAATAGCTAGC 60.048 66.667 41.82 6.62 37.50 3.42
2612 2657 4.873129 CGATGACTGACCGGCCGG 62.873 72.222 42.17 42.17 42.03 6.13
2613 2658 4.873129 CCGATGACTGACCGGCCG 62.873 72.222 21.04 21.04 36.62 6.13
2614 2659 3.771160 ACCGATGACTGACCGGCC 61.771 66.667 0.00 0.00 46.54 6.13
2615 2660 2.509336 CACCGATGACTGACCGGC 60.509 66.667 0.00 0.00 46.54 6.13
2645 2690 4.111016 TCTGACGTAGCCGCCACG 62.111 66.667 9.89 9.89 44.80 4.94
2646 2691 2.506438 GTCTGACGTAGCCGCCAC 60.506 66.667 0.00 0.00 37.70 5.01
2647 2692 2.986979 TGTCTGACGTAGCCGCCA 60.987 61.111 2.98 0.00 37.70 5.69
2648 2693 2.202623 CTGTCTGACGTAGCCGCC 60.203 66.667 2.98 0.00 37.70 6.13
2649 2694 2.202623 CCTGTCTGACGTAGCCGC 60.203 66.667 2.98 0.00 37.70 6.53
2650 2695 2.267681 GACCCTGTCTGACGTAGCCG 62.268 65.000 2.98 0.00 40.83 5.52
2651 2696 1.248785 TGACCCTGTCTGACGTAGCC 61.249 60.000 2.98 0.00 33.15 3.93
2652 2697 0.171455 CTGACCCTGTCTGACGTAGC 59.829 60.000 2.98 0.00 34.21 3.58
2653 2698 1.535833 ACTGACCCTGTCTGACGTAG 58.464 55.000 2.98 0.00 35.84 3.51
2654 2699 1.991121 AACTGACCCTGTCTGACGTA 58.009 50.000 2.98 0.00 35.84 3.57
2655 2700 1.120530 AAACTGACCCTGTCTGACGT 58.879 50.000 2.98 0.00 35.84 4.34
2656 2701 1.068588 TCAAACTGACCCTGTCTGACG 59.931 52.381 2.98 0.00 35.84 4.35
2657 2702 2.910688 TCAAACTGACCCTGTCTGAC 57.089 50.000 0.00 0.00 35.84 3.51
2658 2703 3.554960 CGAATCAAACTGACCCTGTCTGA 60.555 47.826 7.93 0.00 35.84 3.27
2659 2704 2.738846 CGAATCAAACTGACCCTGTCTG 59.261 50.000 0.30 0.30 37.49 3.51
2660 2705 2.368875 ACGAATCAAACTGACCCTGTCT 59.631 45.455 0.00 0.00 33.15 3.41
2661 2706 2.480419 CACGAATCAAACTGACCCTGTC 59.520 50.000 0.00 0.00 0.00 3.51
2662 2707 2.104111 TCACGAATCAAACTGACCCTGT 59.896 45.455 0.00 0.00 0.00 4.00
2663 2708 2.480419 GTCACGAATCAAACTGACCCTG 59.520 50.000 0.00 0.00 0.00 4.45
2664 2709 2.550208 GGTCACGAATCAAACTGACCCT 60.550 50.000 6.35 0.00 44.81 4.34
2665 2710 1.804748 GGTCACGAATCAAACTGACCC 59.195 52.381 6.35 0.00 44.81 4.46
2667 2712 3.184581 GTCAGGTCACGAATCAAACTGAC 59.815 47.826 8.90 8.90 44.12 3.51
2668 2713 3.390135 GTCAGGTCACGAATCAAACTGA 58.610 45.455 0.00 0.00 0.00 3.41
2669 2714 2.480419 GGTCAGGTCACGAATCAAACTG 59.520 50.000 0.00 0.00 0.00 3.16
2670 2715 2.550208 GGGTCAGGTCACGAATCAAACT 60.550 50.000 0.00 0.00 0.00 2.66
2671 2716 1.804748 GGGTCAGGTCACGAATCAAAC 59.195 52.381 0.00 0.00 0.00 2.93
2672 2717 1.697432 AGGGTCAGGTCACGAATCAAA 59.303 47.619 0.00 0.00 0.00 2.69
2673 2718 1.275291 GAGGGTCAGGTCACGAATCAA 59.725 52.381 0.00 0.00 0.00 2.57
2674 2719 0.895530 GAGGGTCAGGTCACGAATCA 59.104 55.000 0.00 0.00 0.00 2.57
2675 2720 0.895530 TGAGGGTCAGGTCACGAATC 59.104 55.000 0.00 0.00 0.00 2.52
2676 2721 1.208052 CATGAGGGTCAGGTCACGAAT 59.792 52.381 0.00 0.00 0.00 3.34
2677 2722 0.608130 CATGAGGGTCAGGTCACGAA 59.392 55.000 0.00 0.00 0.00 3.85
2678 2723 0.541998 ACATGAGGGTCAGGTCACGA 60.542 55.000 0.00 0.00 36.60 4.35
2679 2724 0.321671 AACATGAGGGTCAGGTCACG 59.678 55.000 0.00 0.00 40.86 4.35
2680 2725 2.154462 CAAACATGAGGGTCAGGTCAC 58.846 52.381 0.00 0.00 40.86 3.67
2681 2726 1.073763 CCAAACATGAGGGTCAGGTCA 59.926 52.381 0.00 0.00 40.86 4.02
2682 2727 1.351017 TCCAAACATGAGGGTCAGGTC 59.649 52.381 0.00 0.00 40.86 3.85
2683 2728 1.444933 TCCAAACATGAGGGTCAGGT 58.555 50.000 0.00 0.00 43.89 4.00
2684 2729 2.372264 CATCCAAACATGAGGGTCAGG 58.628 52.381 0.00 0.00 33.86 3.86
2685 2730 2.372264 CCATCCAAACATGAGGGTCAG 58.628 52.381 0.00 0.00 0.00 3.51
2686 2731 1.616725 GCCATCCAAACATGAGGGTCA 60.617 52.381 0.00 0.00 36.10 4.02
2687 2732 1.106285 GCCATCCAAACATGAGGGTC 58.894 55.000 0.00 0.00 36.10 4.46
2688 2733 0.324645 GGCCATCCAAACATGAGGGT 60.325 55.000 0.00 0.00 36.10 4.34
2689 2734 0.324552 TGGCCATCCAAACATGAGGG 60.325 55.000 0.00 0.00 39.99 4.30
2690 2735 1.108776 CTGGCCATCCAAACATGAGG 58.891 55.000 5.51 0.00 42.91 3.86
2691 2736 1.843368 ACTGGCCATCCAAACATGAG 58.157 50.000 5.51 0.00 42.91 2.90
2692 2737 3.668141 ATACTGGCCATCCAAACATGA 57.332 42.857 5.51 0.00 42.91 3.07
2693 2738 3.448301 ACAATACTGGCCATCCAAACATG 59.552 43.478 5.51 0.27 42.91 3.21
2694 2739 3.711863 ACAATACTGGCCATCCAAACAT 58.288 40.909 5.51 0.00 42.91 2.71
2695 2740 3.168035 ACAATACTGGCCATCCAAACA 57.832 42.857 5.51 0.00 42.91 2.83
2696 2741 4.244862 CAAACAATACTGGCCATCCAAAC 58.755 43.478 5.51 0.00 42.91 2.93
2697 2742 3.260380 CCAAACAATACTGGCCATCCAAA 59.740 43.478 5.51 0.00 42.91 3.28
2698 2743 2.830923 CCAAACAATACTGGCCATCCAA 59.169 45.455 5.51 0.00 42.91 3.53
2699 2744 2.225242 ACCAAACAATACTGGCCATCCA 60.225 45.455 5.51 0.00 40.85 3.41
2700 2745 2.166254 CACCAAACAATACTGGCCATCC 59.834 50.000 5.51 0.00 36.03 3.51
2701 2746 2.825532 ACACCAAACAATACTGGCCATC 59.174 45.455 5.51 0.00 36.03 3.51
2702 2747 2.562298 CACACCAAACAATACTGGCCAT 59.438 45.455 5.51 0.00 36.03 4.40
2703 2748 1.959985 CACACCAAACAATACTGGCCA 59.040 47.619 4.71 4.71 36.03 5.36
2704 2749 1.272212 CCACACCAAACAATACTGGCC 59.728 52.381 0.00 0.00 36.03 5.36
2705 2750 2.235016 TCCACACCAAACAATACTGGC 58.765 47.619 0.00 0.00 36.03 4.85
2706 2751 3.826157 ACATCCACACCAAACAATACTGG 59.174 43.478 0.00 0.00 38.77 4.00
2707 2752 4.518590 TCACATCCACACCAAACAATACTG 59.481 41.667 0.00 0.00 0.00 2.74
2708 2753 4.724399 TCACATCCACACCAAACAATACT 58.276 39.130 0.00 0.00 0.00 2.12
2709 2754 5.446143 TTCACATCCACACCAAACAATAC 57.554 39.130 0.00 0.00 0.00 1.89
2710 2755 6.041409 ACATTTCACATCCACACCAAACAATA 59.959 34.615 0.00 0.00 0.00 1.90
2711 2756 5.163322 ACATTTCACATCCACACCAAACAAT 60.163 36.000 0.00 0.00 0.00 2.71
2712 2757 4.161189 ACATTTCACATCCACACCAAACAA 59.839 37.500 0.00 0.00 0.00 2.83
2713 2758 3.703556 ACATTTCACATCCACACCAAACA 59.296 39.130 0.00 0.00 0.00 2.83
2714 2759 4.320608 ACATTTCACATCCACACCAAAC 57.679 40.909 0.00 0.00 0.00 2.93
2715 2760 6.471233 TTTACATTTCACATCCACACCAAA 57.529 33.333 0.00 0.00 0.00 3.28
2716 2761 6.471233 TTTTACATTTCACATCCACACCAA 57.529 33.333 0.00 0.00 0.00 3.67
2717 2762 6.662865 ATTTTACATTTCACATCCACACCA 57.337 33.333 0.00 0.00 0.00 4.17
2718 2763 9.651913 AAATATTTTACATTTCACATCCACACC 57.348 29.630 0.00 0.00 0.00 4.16
2722 2767 9.585099 GCAGAAATATTTTACATTTCACATCCA 57.415 29.630 1.43 0.00 42.37 3.41
2723 2768 9.034544 GGCAGAAATATTTTACATTTCACATCC 57.965 33.333 1.43 2.87 42.37 3.51
2724 2769 9.807649 AGGCAGAAATATTTTACATTTCACATC 57.192 29.630 1.43 0.00 42.37 3.06
2725 2770 9.590451 CAGGCAGAAATATTTTACATTTCACAT 57.410 29.630 1.43 0.00 42.37 3.21
2726 2771 8.034215 CCAGGCAGAAATATTTTACATTTCACA 58.966 33.333 1.43 0.00 42.37 3.58
2727 2772 7.010460 GCCAGGCAGAAATATTTTACATTTCAC 59.990 37.037 6.55 2.77 42.37 3.18
2728 2773 7.041107 GCCAGGCAGAAATATTTTACATTTCA 58.959 34.615 6.55 0.00 42.37 2.69
2729 2774 7.267857 AGCCAGGCAGAAATATTTTACATTTC 58.732 34.615 15.80 0.00 40.94 2.17
2730 2775 7.186570 AGCCAGGCAGAAATATTTTACATTT 57.813 32.000 15.80 0.00 0.00 2.32
2731 2776 6.796785 AGCCAGGCAGAAATATTTTACATT 57.203 33.333 15.80 0.00 0.00 2.71
2732 2777 6.491403 CCTAGCCAGGCAGAAATATTTTACAT 59.509 38.462 15.80 0.00 34.35 2.29
2733 2778 5.827797 CCTAGCCAGGCAGAAATATTTTACA 59.172 40.000 15.80 0.00 34.35 2.41
2734 2779 6.319141 CCTAGCCAGGCAGAAATATTTTAC 57.681 41.667 15.80 0.00 34.35 2.01
2748 2793 0.254178 ATCACACAAGCCTAGCCAGG 59.746 55.000 0.00 0.00 45.77 4.45
2749 2794 1.209019 AGATCACACAAGCCTAGCCAG 59.791 52.381 0.00 0.00 0.00 4.85
2750 2795 1.065926 CAGATCACACAAGCCTAGCCA 60.066 52.381 0.00 0.00 0.00 4.75
2751 2796 1.208052 TCAGATCACACAAGCCTAGCC 59.792 52.381 0.00 0.00 0.00 3.93
2752 2797 2.680312 TCAGATCACACAAGCCTAGC 57.320 50.000 0.00 0.00 0.00 3.42
2753 2798 3.801050 CGATTCAGATCACACAAGCCTAG 59.199 47.826 0.00 0.00 32.33 3.02
2754 2799 3.195610 ACGATTCAGATCACACAAGCCTA 59.804 43.478 0.00 0.00 32.33 3.93
2755 2800 2.027745 ACGATTCAGATCACACAAGCCT 60.028 45.455 0.00 0.00 32.33 4.58
2756 2801 2.350522 ACGATTCAGATCACACAAGCC 58.649 47.619 0.00 0.00 32.33 4.35
2757 2802 4.153986 CAAACGATTCAGATCACACAAGC 58.846 43.478 0.00 0.00 32.33 4.01
2758 2803 4.214119 ACCAAACGATTCAGATCACACAAG 59.786 41.667 0.00 0.00 32.33 3.16
2759 2804 4.133820 ACCAAACGATTCAGATCACACAA 58.866 39.130 0.00 0.00 32.33 3.33
2760 2805 3.738982 ACCAAACGATTCAGATCACACA 58.261 40.909 0.00 0.00 32.33 3.72
2761 2806 4.213270 TGAACCAAACGATTCAGATCACAC 59.787 41.667 0.00 0.00 31.29 3.82
2762 2807 4.384940 TGAACCAAACGATTCAGATCACA 58.615 39.130 0.00 0.00 31.29 3.58
2763 2808 5.327091 CATGAACCAAACGATTCAGATCAC 58.673 41.667 0.00 0.00 38.19 3.06
2764 2809 4.142622 GCATGAACCAAACGATTCAGATCA 60.143 41.667 0.00 0.00 38.19 2.92
2765 2810 4.346129 GCATGAACCAAACGATTCAGATC 58.654 43.478 0.00 0.00 38.19 2.75
2766 2811 3.129287 GGCATGAACCAAACGATTCAGAT 59.871 43.478 0.00 0.00 38.19 2.90
2767 2812 2.487762 GGCATGAACCAAACGATTCAGA 59.512 45.455 0.00 0.00 38.19 3.27
2768 2813 2.489329 AGGCATGAACCAAACGATTCAG 59.511 45.455 0.00 0.00 38.19 3.02
2769 2814 2.228582 CAGGCATGAACCAAACGATTCA 59.771 45.455 0.00 0.00 39.09 2.57
2770 2815 2.415893 CCAGGCATGAACCAAACGATTC 60.416 50.000 0.00 0.00 0.00 2.52
2771 2816 1.545582 CCAGGCATGAACCAAACGATT 59.454 47.619 0.00 0.00 0.00 3.34
2772 2817 1.176527 CCAGGCATGAACCAAACGAT 58.823 50.000 0.00 0.00 0.00 3.73
2773 2818 0.109532 TCCAGGCATGAACCAAACGA 59.890 50.000 0.00 0.00 0.00 3.85
2774 2819 0.240945 GTCCAGGCATGAACCAAACG 59.759 55.000 0.00 0.00 0.00 3.60
2775 2820 0.603065 GGTCCAGGCATGAACCAAAC 59.397 55.000 0.32 0.00 0.00 2.93
2776 2821 0.187117 TGGTCCAGGCATGAACCAAA 59.813 50.000 7.12 0.00 38.80 3.28
2777 2822 0.251297 CTGGTCCAGGCATGAACCAA 60.251 55.000 11.57 0.00 41.07 3.67
2778 2823 1.379916 CTGGTCCAGGCATGAACCA 59.620 57.895 9.73 9.73 39.42 3.67
2779 2824 1.379044 CCTGGTCCAGGCATGAACC 60.379 63.158 25.31 0.00 45.13 3.62
2780 2825 4.326255 CCTGGTCCAGGCATGAAC 57.674 61.111 25.31 0.00 45.13 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.