Multiple sequence alignment - TraesCS5A01G348600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G348600 chr5A 100.000 7298 0 0 1 7298 552156355 552163652 0.000000e+00 13477.0
1 TraesCS5A01G348600 chr5A 90.071 282 28 0 4853 5134 552161162 552161443 4.160000e-97 366.0
2 TraesCS5A01G348600 chr5A 90.071 282 28 0 4808 5089 552161207 552161488 4.160000e-97 366.0
3 TraesCS5A01G348600 chr5A 92.797 236 17 0 4899 5134 552161163 552161398 7.010000e-90 342.0
4 TraesCS5A01G348600 chr5A 92.797 236 17 0 4809 5044 552161253 552161488 7.010000e-90 342.0
5 TraesCS5A01G348600 chr4B 97.430 1673 11 3 1380 3025 540473172 540474839 0.000000e+00 2822.0
6 TraesCS5A01G348600 chr4B 90.580 138 13 0 6345 6482 106227546 106227409 4.500000e-42 183.0
7 TraesCS5A01G348600 chr7B 96.801 1688 24 12 1459 3119 750102791 750104475 0.000000e+00 2791.0
8 TraesCS5A01G348600 chr7B 80.593 742 125 16 5269 6000 716539286 716538554 8.270000e-154 555.0
9 TraesCS5A01G348600 chr7B 78.632 585 113 9 5268 5843 716594423 716593842 1.920000e-100 377.0
10 TraesCS5A01G348600 chr7B 76.730 159 33 3 4516 4672 716594874 716594718 1.300000e-12 86.1
11 TraesCS5A01G348600 chr7B 83.529 85 8 6 13 95 32338301 32338221 2.820000e-09 75.0
12 TraesCS5A01G348600 chr7B 78.641 103 16 6 6 106 719490061 719489963 6.110000e-06 63.9
13 TraesCS5A01G348600 chr2A 96.621 1598 26 2 1427 2996 479840229 479838632 0.000000e+00 2627.0
14 TraesCS5A01G348600 chr2A 89.928 139 14 0 6346 6484 141506334 141506472 5.820000e-41 180.0
15 TraesCS5A01G348600 chr5B 95.972 1589 21 4 1430 2991 669597248 669598820 0.000000e+00 2540.0
16 TraesCS5A01G348600 chr5B 91.915 1645 126 5 4850 6490 531152481 531154122 0.000000e+00 2294.0
17 TraesCS5A01G348600 chr5B 92.208 1309 92 8 3783 5089 531151465 531152765 0.000000e+00 1844.0
18 TraesCS5A01G348600 chr5B 86.277 940 92 20 2 923 531149470 531150390 0.000000e+00 987.0
19 TraesCS5A01G348600 chr5B 89.583 768 64 13 6534 7292 531154122 531154882 0.000000e+00 961.0
20 TraesCS5A01G348600 chr5B 90.575 435 26 4 933 1366 531150486 531150906 4.940000e-156 562.0
21 TraesCS5A01G348600 chr5B 91.185 363 26 5 3442 3800 531151088 531151448 8.510000e-134 488.0
22 TraesCS5A01G348600 chr5B 95.283 106 5 0 3118 3223 531150927 531151032 1.260000e-37 169.0
23 TraesCS5A01G348600 chr5B 81.633 196 31 4 1179 1373 364974126 364973935 2.730000e-34 158.0
24 TraesCS5A01G348600 chr5D 91.598 1821 137 6 4850 6655 436950642 436952461 0.000000e+00 2501.0
25 TraesCS5A01G348600 chr5D 93.191 1307 86 3 3783 5089 436949623 436950926 0.000000e+00 1917.0
26 TraesCS5A01G348600 chr5D 90.121 496 30 5 439 932 436947900 436948378 1.730000e-175 627.0
27 TraesCS5A01G348600 chr5D 84.808 520 61 16 6785 7293 436953176 436953688 2.350000e-139 507.0
28 TraesCS5A01G348600 chr5D 91.484 364 24 5 3442 3800 436949247 436949608 1.830000e-135 494.0
29 TraesCS5A01G348600 chr5D 92.373 236 18 0 4899 5134 436950646 436950881 3.260000e-88 337.0
30 TraesCS5A01G348600 chr5D 96.277 188 6 1 3223 3409 159884531 159884718 2.560000e-79 307.0
31 TraesCS5A01G348600 chr5D 89.855 207 17 4 230 434 436947655 436947859 5.620000e-66 263.0
32 TraesCS5A01G348600 chr5D 92.949 156 10 1 933 1087 436948418 436948573 7.370000e-55 226.0
33 TraesCS5A01G348600 chr5D 96.226 106 4 0 3118 3223 436949066 436949171 2.710000e-39 174.0
34 TraesCS5A01G348600 chr5D 98.851 87 1 0 1280 1366 436948959 436949045 9.800000e-34 156.0
35 TraesCS5A01G348600 chr5D 90.000 100 8 1 2 101 436947557 436947654 2.140000e-25 128.0
36 TraesCS5A01G348600 chr5D 97.368 38 1 0 375 412 436947852 436947889 1.700000e-06 65.8
37 TraesCS5A01G348600 chr3B 96.394 1248 16 3 1574 2794 144486952 144488197 0.000000e+00 2028.0
38 TraesCS5A01G348600 chr3B 97.541 244 4 1 2825 3068 144488198 144488439 4.070000e-112 416.0
39 TraesCS5A01G348600 chr3B 96.774 186 5 1 3223 3407 786911618 786911803 7.110000e-80 309.0
40 TraesCS5A01G348600 chr3B 88.514 148 15 2 6345 6491 528176327 528176181 2.090000e-40 178.0
41 TraesCS5A01G348600 chr4A 92.991 799 20 12 1940 2710 671930532 671929742 0.000000e+00 1133.0
42 TraesCS5A01G348600 chr4A 88.406 276 10 1 2744 2997 671929747 671929472 5.500000e-81 313.0
43 TraesCS5A01G348600 chr4A 92.623 122 7 1 1373 1492 722001266 722001145 2.710000e-39 174.0
44 TraesCS5A01G348600 chr4A 96.154 52 1 1 6 56 90432616 90432565 4.690000e-12 84.2
45 TraesCS5A01G348600 chr7D 81.021 764 123 16 5249 6000 619993595 619994348 8.160000e-164 588.0
46 TraesCS5A01G348600 chr7D 95.812 191 8 0 3219 3409 45145771 45145961 7.110000e-80 309.0
47 TraesCS5A01G348600 chr7D 95.767 189 8 0 3221 3409 433896377 433896565 9.200000e-79 305.0
48 TraesCS5A01G348600 chr2B 81.287 668 67 16 2485 3119 559915753 559915111 8.510000e-134 488.0
49 TraesCS5A01G348600 chr2B 96.875 192 5 1 3223 3414 458962290 458962480 3.290000e-83 320.0
50 TraesCS5A01G348600 chr2B 89.928 139 14 0 6346 6484 190022907 190023045 5.820000e-41 180.0
51 TraesCS5A01G348600 chr2B 81.633 196 31 5 1179 1373 120177926 120178117 2.730000e-34 158.0
52 TraesCS5A01G348600 chr2B 96.078 51 2 0 2 52 678559132 678559082 4.690000e-12 84.2
53 TraesCS5A01G348600 chrUn 78.980 647 121 13 5363 6000 404361642 404361002 1.880000e-115 427.0
54 TraesCS5A01G348600 chrUn 96.296 189 7 0 3221 3409 51492676 51492864 1.980000e-80 311.0
55 TraesCS5A01G348600 chrUn 96.296 189 7 0 3221 3409 348959346 348959158 1.980000e-80 311.0
56 TraesCS5A01G348600 chrUn 94.355 124 7 0 1373 1496 68023253 68023130 2.690000e-44 191.0
57 TraesCS5A01G348600 chrUn 86.061 165 17 6 6342 6501 50619851 50620014 9.730000e-39 172.0
58 TraesCS5A01G348600 chrUn 94.444 54 2 1 6 58 37902463 37902516 1.690000e-11 82.4
59 TraesCS5A01G348600 chr4D 79.968 619 76 15 2469 3060 207591420 207590823 5.270000e-111 412.0
60 TraesCS5A01G348600 chr4D 93.909 197 12 0 3221 3417 315271986 315271790 1.540000e-76 298.0
61 TraesCS5A01G348600 chr4D 81.529 314 35 8 2763 3060 207588934 207588628 3.400000e-58 237.0
62 TraesCS5A01G348600 chr6D 95.312 192 7 2 3219 3409 86728342 86728532 3.310000e-78 303.0
63 TraesCS5A01G348600 chr1B 94.958 119 4 2 1373 1490 458719538 458719421 1.250000e-42 185.0
64 TraesCS5A01G348600 chr1B 81.122 196 32 5 1179 1373 113650595 113650404 1.270000e-32 152.0
65 TraesCS5A01G348600 chr1B 94.545 55 1 2 4 56 653973904 653973850 4.690000e-12 84.2
66 TraesCS5A01G348600 chr1B 94.444 54 2 1 6 58 311677380 311677327 1.690000e-11 82.4
67 TraesCS5A01G348600 chr7A 94.915 118 4 2 1373 1489 680375161 680375045 4.500000e-42 183.0
68 TraesCS5A01G348600 chr6B 94.068 118 5 2 1373 1489 658720736 658720852 2.090000e-40 178.0
69 TraesCS5A01G348600 chr6B 93.333 120 4 3 1372 1489 83588627 83588510 2.710000e-39 174.0
70 TraesCS5A01G348600 chr6A 89.362 141 15 0 6345 6485 411770390 411770250 2.090000e-40 178.0
71 TraesCS5A01G348600 chr6A 87.943 141 17 0 6351 6491 430338887 430338747 4.530000e-37 167.0
72 TraesCS5A01G348600 chr2D 87.586 145 18 0 6341 6485 79056308 79056164 1.260000e-37 169.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G348600 chr5A 552156355 552163652 7297 False 2978.600000 13477 93.147200 1 7298 5 chr5A.!!$F1 7297
1 TraesCS5A01G348600 chr4B 540473172 540474839 1667 False 2822.000000 2822 97.430000 1380 3025 1 chr4B.!!$F1 1645
2 TraesCS5A01G348600 chr7B 750102791 750104475 1684 False 2791.000000 2791 96.801000 1459 3119 1 chr7B.!!$F1 1660
3 TraesCS5A01G348600 chr7B 716538554 716539286 732 True 555.000000 555 80.593000 5269 6000 1 chr7B.!!$R2 731
4 TraesCS5A01G348600 chr7B 716593842 716594874 1032 True 231.550000 377 77.681000 4516 5843 2 chr7B.!!$R4 1327
5 TraesCS5A01G348600 chr2A 479838632 479840229 1597 True 2627.000000 2627 96.621000 1427 2996 1 chr2A.!!$R1 1569
6 TraesCS5A01G348600 chr5B 669597248 669598820 1572 False 2540.000000 2540 95.972000 1430 2991 1 chr5B.!!$F1 1561
7 TraesCS5A01G348600 chr5B 531149470 531154882 5412 False 1043.571429 2294 91.003714 2 7292 7 chr5B.!!$F2 7290
8 TraesCS5A01G348600 chr5D 436947557 436953688 6131 False 616.316667 2501 92.402000 2 7293 12 chr5D.!!$F2 7291
9 TraesCS5A01G348600 chr3B 144486952 144488439 1487 False 1222.000000 2028 96.967500 1574 3068 2 chr3B.!!$F2 1494
10 TraesCS5A01G348600 chr4A 671929472 671930532 1060 True 723.000000 1133 90.698500 1940 2997 2 chr4A.!!$R3 1057
11 TraesCS5A01G348600 chr7D 619993595 619994348 753 False 588.000000 588 81.021000 5249 6000 1 chr7D.!!$F3 751
12 TraesCS5A01G348600 chr2B 559915111 559915753 642 True 488.000000 488 81.287000 2485 3119 1 chr2B.!!$R1 634
13 TraesCS5A01G348600 chrUn 404361002 404361642 640 True 427.000000 427 78.980000 5363 6000 1 chrUn.!!$R3 637
14 TraesCS5A01G348600 chr4D 207588628 207591420 2792 True 324.500000 412 80.748500 2469 3060 2 chr4D.!!$R2 591

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
645 692 0.252197 CTCCCTCCGGTCGGAAATTT 59.748 55.000 13.36 0.00 44.66 1.82 F
1305 1646 0.957888 GAGGCAGTGCTTCCTGGAAC 60.958 60.000 16.03 3.72 31.71 3.62 F
2811 3215 1.268625 GCCGTGTACCTTCCTTTTTGG 59.731 52.381 0.00 0.00 37.10 3.28 F
3240 5879 0.105709 AAGGGGGTGTTTGGTTCCAG 60.106 55.000 0.00 0.00 0.00 3.86 F
4779 7607 0.178975 TGGGTTGGACGAAGGCAAAT 60.179 50.000 0.00 0.00 0.00 2.32 F
5310 8142 0.244721 TCACCATGCTCACTCTCACG 59.755 55.000 0.00 0.00 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2368 2766 1.072806 TCTGTGCCATGCTCTTGAGTT 59.927 47.619 0.00 0.0 0.00 3.01 R
3226 5865 0.185175 AGTCCCTGGAACCAAACACC 59.815 55.000 0.00 0.0 0.00 4.16 R
3978 6670 1.126488 CTAAGGGCTGGATCTGAGCA 58.874 55.000 16.09 0.0 38.27 4.26 R
5146 7974 1.159285 ATGTGTCGCATGTCCTGTTG 58.841 50.000 0.00 0.0 36.26 3.33 R
6008 8843 0.322648 CATGTGTGTCTCCCTGCTCA 59.677 55.000 0.00 0.0 0.00 4.26 R
6958 10403 0.409092 ATGGCTGTTTCCCCACATCA 59.591 50.000 0.00 0.0 33.17 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 1.626321 TCGGCCAGGATTACAAGACAA 59.374 47.619 2.24 0.00 0.00 3.18
56 57 2.009774 CGGCCAGGATTACAAGACAAG 58.990 52.381 2.24 0.00 0.00 3.16
112 113 6.422776 AAAAGAGAAACTACATGTATGGCG 57.577 37.500 5.91 0.00 0.00 5.69
127 128 5.480205 TGTATGGCGTAATAAGTGTCACAA 58.520 37.500 5.62 0.00 0.00 3.33
135 136 7.540745 GGCGTAATAAGTGTCACAATTTTGAAT 59.459 33.333 5.62 0.00 0.00 2.57
168 169 3.872560 AAACTTAGTTCGAAAGTGCGG 57.127 42.857 0.00 0.00 37.26 5.69
181 182 0.887933 AGTGCGGCACTTATTTTGGG 59.112 50.000 28.90 0.00 42.59 4.12
199 200 1.555533 GGGTTGGAGGGAGTAGTTCAG 59.444 57.143 0.00 0.00 0.00 3.02
207 208 3.018149 AGGGAGTAGTTCAGTCGTGATC 58.982 50.000 0.00 0.00 30.85 2.92
237 238 0.870307 CACGTACGATAGGGTGCAGC 60.870 60.000 24.41 7.55 43.77 5.25
255 256 3.589988 CAGCGTGTTTCAGATCCTAACT 58.410 45.455 0.00 0.00 0.00 2.24
277 278 2.096248 GTCCGGGTTTGCAATATTCCA 58.904 47.619 0.00 0.00 0.00 3.53
279 280 3.886505 GTCCGGGTTTGCAATATTCCATA 59.113 43.478 0.00 0.00 0.00 2.74
316 321 1.398390 CTAAAGCGAGTTCCACATGGC 59.602 52.381 0.00 0.00 34.44 4.40
317 322 1.577328 AAAGCGAGTTCCACATGGCG 61.577 55.000 0.00 0.00 34.44 5.69
366 371 2.234300 AACAACGGGCGGTATAGATG 57.766 50.000 0.00 0.00 0.00 2.90
377 382 4.036262 GGCGGTATAGATGCACAATTGAAA 59.964 41.667 13.59 0.00 0.00 2.69
423 429 5.187687 ACACCGAAAAACCAGAGTTCTTTA 58.812 37.500 0.00 0.00 34.19 1.85
478 521 2.358322 ATCAGCATGCATGATGGACA 57.642 45.000 36.75 22.90 43.87 4.02
506 551 1.338200 ACTTCGCCTTGGTCATCACTC 60.338 52.381 0.00 0.00 0.00 3.51
507 552 0.684535 TTCGCCTTGGTCATCACTCA 59.315 50.000 0.00 0.00 0.00 3.41
508 553 0.904649 TCGCCTTGGTCATCACTCAT 59.095 50.000 0.00 0.00 0.00 2.90
509 554 2.107366 TCGCCTTGGTCATCACTCATA 58.893 47.619 0.00 0.00 0.00 2.15
510 555 2.700371 TCGCCTTGGTCATCACTCATAT 59.300 45.455 0.00 0.00 0.00 1.78
511 556 3.062763 CGCCTTGGTCATCACTCATATC 58.937 50.000 0.00 0.00 0.00 1.63
512 557 3.244009 CGCCTTGGTCATCACTCATATCT 60.244 47.826 0.00 0.00 0.00 1.98
556 603 5.535030 TGGCTAAAAGGAAGAAAAGAAGGAC 59.465 40.000 0.00 0.00 0.00 3.85
604 651 3.380320 TGCAGCTCATGAATCTTGGATTG 59.620 43.478 0.00 0.00 0.00 2.67
645 692 0.252197 CTCCCTCCGGTCGGAAATTT 59.748 55.000 13.36 0.00 44.66 1.82
667 714 8.800370 ATTTCAAGGTGTATTTTGTTTGGTTT 57.200 26.923 0.00 0.00 0.00 3.27
710 763 2.267961 GGACAGTTACTGCCCCCG 59.732 66.667 12.80 0.00 34.37 5.73
711 764 2.267961 GACAGTTACTGCCCCCGG 59.732 66.667 12.80 0.00 34.37 5.73
735 794 1.405821 ACGCCACACAGCTCTAGTATC 59.594 52.381 0.00 0.00 0.00 2.24
736 795 1.269309 CGCCACACAGCTCTAGTATCC 60.269 57.143 0.00 0.00 0.00 2.59
737 796 1.757118 GCCACACAGCTCTAGTATCCA 59.243 52.381 0.00 0.00 0.00 3.41
738 797 2.223923 GCCACACAGCTCTAGTATCCAG 60.224 54.545 0.00 0.00 0.00 3.86
739 798 3.027412 CCACACAGCTCTAGTATCCAGT 58.973 50.000 0.00 0.00 0.00 4.00
740 799 4.207955 CCACACAGCTCTAGTATCCAGTA 58.792 47.826 0.00 0.00 0.00 2.74
741 800 4.645136 CCACACAGCTCTAGTATCCAGTAA 59.355 45.833 0.00 0.00 0.00 2.24
742 801 5.127194 CCACACAGCTCTAGTATCCAGTAAA 59.873 44.000 0.00 0.00 0.00 2.01
763 822 9.503399 AGTAAATAAAGAAAGAAACACGAGGAT 57.497 29.630 0.00 0.00 0.00 3.24
902 963 7.144000 GCTCATGAATCTTGAATATTCAACCC 58.856 38.462 23.86 14.16 44.25 4.11
904 965 7.053498 TCATGAATCTTGAATATTCAACCCGA 58.947 34.615 23.86 19.79 44.25 5.14
907 968 6.093495 TGAATCTTGAATATTCAACCCGACAC 59.907 38.462 23.86 16.65 41.88 3.67
911 972 4.647611 TGAATATTCAACCCGACACTTGT 58.352 39.130 15.82 0.00 33.55 3.16
945 1092 7.251704 ACATGATTACTGTTATGCAACTAGC 57.748 36.000 0.00 0.00 45.96 3.42
950 1097 3.600388 ACTGTTATGCAACTAGCTCACC 58.400 45.455 0.00 0.00 45.94 4.02
971 1118 7.079700 TCACCCATCTGGACTATAAATAGGAA 58.920 38.462 0.00 0.00 37.39 3.36
975 1122 6.398918 CATCTGGACTATAAATAGGAACCCG 58.601 44.000 2.25 0.60 34.69 5.28
997 1145 4.610945 GTTCAACATGTTTTCTCCACCAG 58.389 43.478 8.77 0.00 0.00 4.00
1012 1160 2.299013 CCACCAGTACTCACTAGCAACA 59.701 50.000 0.00 0.00 32.21 3.33
1034 1182 2.868583 CAACATGGATCTACTTCTGCCG 59.131 50.000 0.00 0.00 0.00 5.69
1066 1214 6.035843 CGCTTTTATTGGTGAGTGCATAAAT 58.964 36.000 0.00 0.00 0.00 1.40
1100 1248 4.391523 TCATATATGTGTGTGTGTGTGTGC 59.608 41.667 12.42 0.00 0.00 4.57
1102 1250 2.277247 GTGTGTGTGTGTGTGCGC 60.277 61.111 0.00 0.00 0.00 6.09
1168 1316 5.163903 TGTGTGTGTGTTACGATCATTATGC 60.164 40.000 0.00 0.00 0.00 3.14
1233 1381 3.909258 TTGGGAGCTTCGTCGACGC 62.909 63.158 32.19 18.79 39.60 5.19
1305 1646 0.957888 GAGGCAGTGCTTCCTGGAAC 60.958 60.000 16.03 3.72 31.71 3.62
1366 1707 3.492337 ACAAAACGGTCTCTCTCTCTCT 58.508 45.455 0.00 0.00 0.00 3.10
1369 1710 2.981859 ACGGTCTCTCTCTCTCTCTC 57.018 55.000 0.00 0.00 0.00 3.20
1370 1711 2.467880 ACGGTCTCTCTCTCTCTCTCT 58.532 52.381 0.00 0.00 0.00 3.10
1372 1713 2.695666 CGGTCTCTCTCTCTCTCTCTCT 59.304 54.545 0.00 0.00 0.00 3.10
1373 1714 3.889538 CGGTCTCTCTCTCTCTCTCTCTA 59.110 52.174 0.00 0.00 0.00 2.43
1374 1715 4.524714 CGGTCTCTCTCTCTCTCTCTCTAT 59.475 50.000 0.00 0.00 0.00 1.98
1375 1716 5.710567 CGGTCTCTCTCTCTCTCTCTCTATA 59.289 48.000 0.00 0.00 0.00 1.31
1376 1717 6.378564 CGGTCTCTCTCTCTCTCTCTCTATAT 59.621 46.154 0.00 0.00 0.00 0.86
1377 1718 7.556635 CGGTCTCTCTCTCTCTCTCTCTATATA 59.443 44.444 0.00 0.00 0.00 0.86
1378 1719 9.427821 GGTCTCTCTCTCTCTCTCTCTATATAT 57.572 40.741 0.00 0.00 0.00 0.86
1649 1990 3.955650 ACACATAGAGCCAACGTACTT 57.044 42.857 0.00 0.00 0.00 2.24
2811 3215 1.268625 GCCGTGTACCTTCCTTTTTGG 59.731 52.381 0.00 0.00 37.10 3.28
3080 5719 4.589908 ACAAGCGATGGTAGAAAGGATTT 58.410 39.130 0.00 0.00 43.98 2.17
3081 5720 5.010282 ACAAGCGATGGTAGAAAGGATTTT 58.990 37.500 0.00 0.00 39.27 1.82
3082 5721 5.123979 ACAAGCGATGGTAGAAAGGATTTTC 59.876 40.000 0.00 0.00 39.27 2.29
3083 5722 4.200092 AGCGATGGTAGAAAGGATTTTCC 58.800 43.478 0.00 0.00 42.99 3.13
3084 5723 3.315470 GCGATGGTAGAAAGGATTTTCCC 59.685 47.826 0.00 0.00 42.99 3.97
3085 5724 4.781934 CGATGGTAGAAAGGATTTTCCCT 58.218 43.478 0.00 0.00 42.99 4.20
3086 5725 5.686650 GCGATGGTAGAAAGGATTTTCCCTA 60.687 44.000 0.00 0.00 42.99 3.53
3087 5726 6.534634 CGATGGTAGAAAGGATTTTCCCTAT 58.465 40.000 0.00 0.00 42.99 2.57
3088 5727 7.676947 CGATGGTAGAAAGGATTTTCCCTATA 58.323 38.462 0.00 0.00 42.99 1.31
3089 5728 8.322091 CGATGGTAGAAAGGATTTTCCCTATAT 58.678 37.037 0.00 0.00 42.99 0.86
3170 5809 1.971167 GTGGCGCACATTTCCCTCA 60.971 57.895 10.83 0.00 34.08 3.86
3190 5829 6.316390 CCCTCATTGATACCTACACACTTTTC 59.684 42.308 0.00 0.00 0.00 2.29
3211 5850 5.843673 TCATAACAACTCTTGGTTTGCAA 57.156 34.783 0.00 0.00 35.74 4.08
3223 5862 5.183713 TCTTGGTTTGCAATCCATCACTAAG 59.816 40.000 25.96 19.30 33.50 2.18
3224 5863 3.763360 TGGTTTGCAATCCATCACTAAGG 59.237 43.478 22.62 0.00 0.00 2.69
3225 5864 3.131046 GGTTTGCAATCCATCACTAAGGG 59.869 47.826 19.62 0.00 0.00 3.95
3226 5865 2.734755 TGCAATCCATCACTAAGGGG 57.265 50.000 0.00 0.00 0.00 4.79
3227 5866 1.215173 TGCAATCCATCACTAAGGGGG 59.785 52.381 0.00 0.00 0.00 5.40
3228 5867 1.215423 GCAATCCATCACTAAGGGGGT 59.785 52.381 0.00 0.00 0.00 4.95
3229 5868 2.936202 CAATCCATCACTAAGGGGGTG 58.064 52.381 0.00 0.00 36.17 4.61
3230 5869 2.242196 CAATCCATCACTAAGGGGGTGT 59.758 50.000 0.00 0.00 36.25 4.16
3232 5871 2.354328 TCCATCACTAAGGGGGTGTTT 58.646 47.619 0.00 0.00 36.25 2.83
3233 5872 2.041081 TCCATCACTAAGGGGGTGTTTG 59.959 50.000 0.00 0.00 36.25 2.93
3234 5873 2.446435 CATCACTAAGGGGGTGTTTGG 58.554 52.381 0.00 0.00 36.25 3.28
3236 5875 1.854280 TCACTAAGGGGGTGTTTGGTT 59.146 47.619 0.00 0.00 36.25 3.67
3237 5876 2.158579 TCACTAAGGGGGTGTTTGGTTC 60.159 50.000 0.00 0.00 36.25 3.62
3238 5877 1.146359 ACTAAGGGGGTGTTTGGTTCC 59.854 52.381 0.00 0.00 0.00 3.62
3240 5879 0.105709 AAGGGGGTGTTTGGTTCCAG 60.106 55.000 0.00 0.00 0.00 3.86
3241 5880 1.533033 GGGGGTGTTTGGTTCCAGG 60.533 63.158 0.00 0.00 0.00 4.45
3242 5881 1.533033 GGGGTGTTTGGTTCCAGGG 60.533 63.158 0.00 0.00 0.00 4.45
3243 5882 1.539665 GGGTGTTTGGTTCCAGGGA 59.460 57.895 0.00 0.00 0.00 4.20
3244 5883 0.826256 GGGTGTTTGGTTCCAGGGAC 60.826 60.000 0.00 0.00 0.00 4.46
3246 5885 1.411074 GGTGTTTGGTTCCAGGGACTT 60.411 52.381 0.00 0.00 34.60 3.01
3248 5887 2.764010 GTGTTTGGTTCCAGGGACTTTT 59.236 45.455 0.00 0.00 34.60 2.27
3270 5909 6.844097 TTTTGTGTTGGGACTAGAAAAAGT 57.156 33.333 0.00 0.00 0.00 2.66
3271 5910 6.445357 TTTGTGTTGGGACTAGAAAAAGTC 57.555 37.500 0.00 0.00 44.31 3.01
3282 5921 7.612668 GACTAGAAAAAGTCCCTATCAAACC 57.387 40.000 0.00 0.00 40.06 3.27
3283 5922 7.086685 ACTAGAAAAAGTCCCTATCAAACCA 57.913 36.000 0.00 0.00 0.00 3.67
3284 5923 7.523415 ACTAGAAAAAGTCCCTATCAAACCAA 58.477 34.615 0.00 0.00 0.00 3.67
3285 5924 8.002459 ACTAGAAAAAGTCCCTATCAAACCAAA 58.998 33.333 0.00 0.00 0.00 3.28
3286 5925 7.050970 AGAAAAAGTCCCTATCAAACCAAAC 57.949 36.000 0.00 0.00 0.00 2.93
3287 5926 6.609616 AGAAAAAGTCCCTATCAAACCAAACA 59.390 34.615 0.00 0.00 0.00 2.83
3288 5927 6.994421 AAAAGTCCCTATCAAACCAAACAT 57.006 33.333 0.00 0.00 0.00 2.71
3289 5928 5.982890 AAGTCCCTATCAAACCAAACATG 57.017 39.130 0.00 0.00 0.00 3.21
3290 5929 4.344104 AGTCCCTATCAAACCAAACATGG 58.656 43.478 0.00 0.00 0.00 3.66
3291 5930 4.086457 GTCCCTATCAAACCAAACATGGT 58.914 43.478 0.00 0.00 45.55 3.55
3292 5931 4.082245 GTCCCTATCAAACCAAACATGGTG 60.082 45.833 0.47 0.00 42.20 4.17
3293 5932 3.195396 CCCTATCAAACCAAACATGGTGG 59.805 47.826 14.45 14.45 42.20 4.61
3294 5933 3.195396 CCTATCAAACCAAACATGGTGGG 59.805 47.826 18.83 12.47 42.20 4.61
3295 5934 2.461300 TCAAACCAAACATGGTGGGA 57.539 45.000 12.48 1.30 42.20 4.37
3296 5935 2.035632 TCAAACCAAACATGGTGGGAC 58.964 47.619 12.48 0.00 42.20 4.46
3297 5936 2.038659 CAAACCAAACATGGTGGGACT 58.961 47.619 12.48 0.00 42.20 3.85
3298 5937 2.433970 CAAACCAAACATGGTGGGACTT 59.566 45.455 12.48 0.30 42.20 3.01
3299 5938 2.470057 ACCAAACATGGTGGGACTTT 57.530 45.000 12.48 0.00 41.33 2.66
3300 5939 2.758130 ACCAAACATGGTGGGACTTTT 58.242 42.857 12.48 0.00 41.33 2.27
3301 5940 3.111484 ACCAAACATGGTGGGACTTTTT 58.889 40.909 12.48 0.00 41.33 1.94
3331 5970 7.859613 CTTTTTGCTAAAAGTCCTTAGAAGC 57.140 36.000 20.79 0.00 43.34 3.86
3332 5971 6.952773 TTTTGCTAAAAGTCCTTAGAAGCA 57.047 33.333 6.73 6.73 31.59 3.91
3333 5972 5.941948 TTGCTAAAAGTCCTTAGAAGCAC 57.058 39.130 9.21 0.00 31.59 4.40
3334 5973 4.324267 TGCTAAAAGTCCTTAGAAGCACC 58.676 43.478 6.73 0.00 31.59 5.01
3335 5974 4.041691 TGCTAAAAGTCCTTAGAAGCACCT 59.958 41.667 6.73 0.00 31.59 4.00
3336 5975 4.632251 GCTAAAAGTCCTTAGAAGCACCTC 59.368 45.833 0.00 0.00 31.59 3.85
3337 5976 4.984146 AAAAGTCCTTAGAAGCACCTCT 57.016 40.909 0.00 0.00 0.00 3.69
3338 5977 4.984146 AAAGTCCTTAGAAGCACCTCTT 57.016 40.909 0.00 0.00 37.83 2.85
3339 5978 4.984146 AAGTCCTTAGAAGCACCTCTTT 57.016 40.909 0.00 0.00 34.56 2.52
3340 5979 4.278975 AGTCCTTAGAAGCACCTCTTTG 57.721 45.455 0.00 0.00 34.56 2.77
3341 5980 3.904339 AGTCCTTAGAAGCACCTCTTTGA 59.096 43.478 0.00 0.00 34.56 2.69
3342 5981 4.020662 AGTCCTTAGAAGCACCTCTTTGAG 60.021 45.833 0.00 0.00 34.56 3.02
3343 5982 4.021016 GTCCTTAGAAGCACCTCTTTGAGA 60.021 45.833 0.00 0.00 34.56 3.27
3344 5983 4.221703 TCCTTAGAAGCACCTCTTTGAGAG 59.778 45.833 0.00 0.00 41.96 3.20
3345 5984 4.020662 CCTTAGAAGCACCTCTTTGAGAGT 60.021 45.833 4.43 0.00 40.72 3.24
3346 5985 3.676291 AGAAGCACCTCTTTGAGAGTC 57.324 47.619 4.43 0.00 40.72 3.36
3347 5986 3.238597 AGAAGCACCTCTTTGAGAGTCT 58.761 45.455 0.00 0.00 40.72 3.24
3348 5987 3.645687 AGAAGCACCTCTTTGAGAGTCTT 59.354 43.478 0.00 4.72 40.72 3.01
3349 5988 4.102367 AGAAGCACCTCTTTGAGAGTCTTT 59.898 41.667 0.00 0.00 40.72 2.52
3350 5989 4.429854 AGCACCTCTTTGAGAGTCTTTT 57.570 40.909 0.00 0.00 40.72 2.27
3351 5990 4.786425 AGCACCTCTTTGAGAGTCTTTTT 58.214 39.130 0.00 0.00 40.72 1.94
3352 5991 4.819088 AGCACCTCTTTGAGAGTCTTTTTC 59.181 41.667 0.00 0.00 40.72 2.29
3353 5992 4.576463 GCACCTCTTTGAGAGTCTTTTTCA 59.424 41.667 0.00 0.00 40.72 2.69
3354 5993 5.066505 GCACCTCTTTGAGAGTCTTTTTCAA 59.933 40.000 0.00 0.00 40.72 2.69
3355 5994 6.404734 GCACCTCTTTGAGAGTCTTTTTCAAA 60.405 38.462 0.00 0.00 40.72 2.69
3356 5995 7.538575 CACCTCTTTGAGAGTCTTTTTCAAAA 58.461 34.615 0.00 0.00 40.72 2.44
3357 5996 8.028938 CACCTCTTTGAGAGTCTTTTTCAAAAA 58.971 33.333 0.00 0.00 40.72 1.94
3358 5997 8.246871 ACCTCTTTGAGAGTCTTTTTCAAAAAG 58.753 33.333 15.46 15.46 40.72 2.27
3359 5998 8.246871 CCTCTTTGAGAGTCTTTTTCAAAAAGT 58.753 33.333 19.82 4.20 40.72 2.66
3360 5999 9.283420 CTCTTTGAGAGTCTTTTTCAAAAAGTC 57.717 33.333 19.82 15.25 39.51 3.01
3361 6000 8.244113 TCTTTGAGAGTCTTTTTCAAAAAGTCC 58.756 33.333 19.82 12.77 39.51 3.85
3362 6001 7.703058 TTGAGAGTCTTTTTCAAAAAGTCCT 57.297 32.000 19.82 16.49 0.00 3.85
3363 6002 8.801882 TTGAGAGTCTTTTTCAAAAAGTCCTA 57.198 30.769 19.82 0.61 0.00 2.94
3364 6003 8.438676 TGAGAGTCTTTTTCAAAAAGTCCTAG 57.561 34.615 19.82 0.00 0.00 3.02
3365 6004 7.499232 TGAGAGTCTTTTTCAAAAAGTCCTAGG 59.501 37.037 19.82 0.82 0.00 3.02
3366 6005 6.773200 AGAGTCTTTTTCAAAAAGTCCTAGGG 59.227 38.462 19.82 0.00 0.00 3.53
3367 6006 6.669631 AGTCTTTTTCAAAAAGTCCTAGGGA 58.330 36.000 19.82 0.00 0.00 4.20
3399 6038 5.327616 GTCCTAGGACTAGAGAACCAAAC 57.672 47.826 31.12 3.26 41.57 2.93
3400 6039 4.771054 GTCCTAGGACTAGAGAACCAAACA 59.229 45.833 31.12 0.00 41.57 2.83
3401 6040 4.771054 TCCTAGGACTAGAGAACCAAACAC 59.229 45.833 7.62 0.00 35.21 3.32
3402 6041 4.081586 CCTAGGACTAGAGAACCAAACACC 60.082 50.000 1.05 0.00 35.21 4.16
3403 6042 3.314693 AGGACTAGAGAACCAAACACCA 58.685 45.455 0.00 0.00 0.00 4.17
3404 6043 3.071167 AGGACTAGAGAACCAAACACCAC 59.929 47.826 0.00 0.00 0.00 4.16
3405 6044 3.400255 GACTAGAGAACCAAACACCACC 58.600 50.000 0.00 0.00 0.00 4.61
3406 6045 3.046374 ACTAGAGAACCAAACACCACCT 58.954 45.455 0.00 0.00 0.00 4.00
3407 6046 4.228824 ACTAGAGAACCAAACACCACCTA 58.771 43.478 0.00 0.00 0.00 3.08
3408 6047 4.657039 ACTAGAGAACCAAACACCACCTAA 59.343 41.667 0.00 0.00 0.00 2.69
3409 6048 3.816994 AGAGAACCAAACACCACCTAAC 58.183 45.455 0.00 0.00 0.00 2.34
3410 6049 3.201266 AGAGAACCAAACACCACCTAACA 59.799 43.478 0.00 0.00 0.00 2.41
3411 6050 4.141251 AGAGAACCAAACACCACCTAACAT 60.141 41.667 0.00 0.00 0.00 2.71
3412 6051 4.542697 AGAACCAAACACCACCTAACATT 58.457 39.130 0.00 0.00 0.00 2.71
3413 6052 4.959839 AGAACCAAACACCACCTAACATTT 59.040 37.500 0.00 0.00 0.00 2.32
3414 6053 4.664150 ACCAAACACCACCTAACATTTG 57.336 40.909 0.00 0.00 0.00 2.32
3415 6054 4.027437 ACCAAACACCACCTAACATTTGT 58.973 39.130 0.00 0.00 0.00 2.83
3416 6055 5.202004 ACCAAACACCACCTAACATTTGTA 58.798 37.500 0.00 0.00 0.00 2.41
3417 6056 5.836358 ACCAAACACCACCTAACATTTGTAT 59.164 36.000 0.00 0.00 0.00 2.29
3418 6057 7.005296 ACCAAACACCACCTAACATTTGTATA 58.995 34.615 0.00 0.00 0.00 1.47
3419 6058 7.672239 ACCAAACACCACCTAACATTTGTATAT 59.328 33.333 0.00 0.00 0.00 0.86
3420 6059 9.179909 CCAAACACCACCTAACATTTGTATATA 57.820 33.333 0.00 0.00 0.00 0.86
3510 6162 9.958285 CATATGAACTATTGCATATACACGAAC 57.042 33.333 0.00 0.00 35.98 3.95
3618 6270 7.010183 CCCTTCTAAACTGTTACATGTCGTATG 59.990 40.741 0.00 1.78 0.00 2.39
3619 6271 7.010183 CCTTCTAAACTGTTACATGTCGTATGG 59.990 40.741 0.00 0.00 0.00 2.74
3621 6273 7.255569 TCTAAACTGTTACATGTCGTATGGAG 58.744 38.462 0.00 0.00 0.00 3.86
3624 6276 6.710597 ACTGTTACATGTCGTATGGAGTAT 57.289 37.500 0.00 0.00 0.00 2.12
3631 6283 9.524106 TTACATGTCGTATGGAGTATAAAAGTG 57.476 33.333 0.00 0.00 0.00 3.16
3632 6284 7.553334 ACATGTCGTATGGAGTATAAAAGTGT 58.447 34.615 0.00 0.00 0.00 3.55
3633 6285 8.689061 ACATGTCGTATGGAGTATAAAAGTGTA 58.311 33.333 0.00 0.00 0.00 2.90
3667 6319 3.308595 GCGTCATCAATCAAATGGTACGA 59.691 43.478 0.00 0.00 0.00 3.43
3669 6321 5.670097 CGTCATCAATCAAATGGTACGATC 58.330 41.667 0.00 0.00 0.00 3.69
3686 6339 4.981794 ACGATCGTTCAAAATTTCCATCC 58.018 39.130 16.60 0.00 0.00 3.51
3693 6346 6.209589 TCGTTCAAAATTTCCATCCCAATACA 59.790 34.615 0.00 0.00 0.00 2.29
3725 6379 8.528917 AAAAATTAATTACGTCAAAAGCTCCC 57.471 30.769 0.01 0.00 0.00 4.30
3760 6415 3.531397 ACCTTTGATTGATGGGGGTGATA 59.469 43.478 0.00 0.00 0.00 2.15
3860 6552 6.621316 TCAAAGCGGAGTGTGTAAATTAAA 57.379 33.333 0.00 0.00 0.00 1.52
3861 6553 7.209471 TCAAAGCGGAGTGTGTAAATTAAAT 57.791 32.000 0.00 0.00 0.00 1.40
3996 6688 1.811778 ATGCTCAGATCCAGCCCTTA 58.188 50.000 10.94 0.00 35.89 2.69
3998 6690 0.250252 GCTCAGATCCAGCCCTTAGC 60.250 60.000 3.27 0.00 44.25 3.09
4029 6721 8.702438 CATGGATATCAACAATTATTTTTCGCC 58.298 33.333 4.83 0.00 0.00 5.54
4031 6723 8.253810 TGGATATCAACAATTATTTTTCGCCAA 58.746 29.630 4.83 0.00 0.00 4.52
4032 6724 9.092876 GGATATCAACAATTATTTTTCGCCAAA 57.907 29.630 4.83 0.00 0.00 3.28
4044 6736 5.392767 TTTTCGCCAAATTAAGCCACATA 57.607 34.783 0.00 0.00 0.00 2.29
4055 6747 7.403312 AATTAAGCCACATATACTGCAAACA 57.597 32.000 0.00 0.00 0.00 2.83
4057 6749 4.906065 AGCCACATATACTGCAAACATG 57.094 40.909 0.00 0.00 0.00 3.21
4167 6860 7.724506 TCCTCACCACTATTAACCTACTGATAG 59.275 40.741 0.00 0.00 0.00 2.08
4205 6898 4.022155 TGTTTGTCATATGTGCATGCAGTT 60.022 37.500 23.41 14.09 0.00 3.16
4263 6956 1.494721 ACCTCAAGTCTGGCAAAGGAA 59.505 47.619 2.23 0.00 0.00 3.36
4277 6970 3.491792 GCAAAGGAACACGGAAAATTGGA 60.492 43.478 0.00 0.00 0.00 3.53
4278 6971 4.799255 GCAAAGGAACACGGAAAATTGGAT 60.799 41.667 0.00 0.00 0.00 3.41
4386 7079 8.494347 GCAAAATATTTGCAACACATAGAACAA 58.506 29.630 19.73 0.00 44.34 2.83
4393 7086 4.236935 GCAACACATAGAACAAACATGGG 58.763 43.478 0.00 0.00 0.00 4.00
4401 7094 8.739039 CACATAGAACAAACATGGGAGAAAATA 58.261 33.333 0.00 0.00 0.00 1.40
4439 7132 4.576463 GTGTCATATGGGTTAGAAGGCAAG 59.424 45.833 2.13 0.00 0.00 4.01
4447 7140 4.288626 TGGGTTAGAAGGCAAGACATACTT 59.711 41.667 0.00 0.00 39.70 2.24
4485 7178 7.069331 TCCCAAACTTAAAGAAGATCTTTGCAA 59.931 33.333 9.87 0.00 45.45 4.08
4508 7201 6.759497 ACATATAAGCCAAGGAAACAAGAC 57.241 37.500 0.00 0.00 0.00 3.01
4512 7205 8.902806 CATATAAGCCAAGGAAACAAGACAATA 58.097 33.333 0.00 0.00 0.00 1.90
4572 7310 5.180304 GGAAAGGATGAAACAGAAGTCTCAC 59.820 44.000 0.00 0.00 0.00 3.51
4647 7475 1.209747 GGGTAGAAGGCGAGGATGTTT 59.790 52.381 0.00 0.00 0.00 2.83
4672 7500 9.958180 TTTAAAGGAAATCTCTGTGTCATATGA 57.042 29.630 0.00 0.00 0.00 2.15
4681 7509 6.427441 TCTCTGTGTCATATGAGGTAGAAGT 58.573 40.000 5.42 0.00 0.00 3.01
4699 7527 4.775253 AGAAGTCAGGAAGAGTCTAAAGGG 59.225 45.833 0.00 0.00 0.00 3.95
4737 7565 4.867086 TGGGAAAGAACAAGAAGGAAAGT 58.133 39.130 0.00 0.00 0.00 2.66
4739 7567 5.127031 TGGGAAAGAACAAGAAGGAAAGTTG 59.873 40.000 0.00 0.00 0.00 3.16
4752 7580 5.324832 AGGAAAGTTGAAGGAAATCTCCA 57.675 39.130 0.00 0.00 45.24 3.86
4779 7607 0.178975 TGGGTTGGACGAAGGCAAAT 60.179 50.000 0.00 0.00 0.00 2.32
4784 7612 2.198827 TGGACGAAGGCAAATGTGAT 57.801 45.000 0.00 0.00 0.00 3.06
4785 7613 2.513753 TGGACGAAGGCAAATGTGATT 58.486 42.857 0.00 0.00 0.00 2.57
4804 7632 9.787532 ATGTGATTACAATAAATTCTTGAACCG 57.212 29.630 0.00 0.00 40.84 4.44
4844 7672 7.445096 CCACATAAAGCTACAATGTCATATGGA 59.555 37.037 2.13 0.00 31.60 3.41
4892 7720 6.791887 AAAGCTACAATGTCATATGGATCG 57.208 37.500 2.13 0.00 0.00 3.69
4897 7725 6.372659 GCTACAATGTCATATGGATCGGAAAT 59.627 38.462 2.13 0.00 0.00 2.17
4923 7751 5.543507 AGAGGATCCACATAAAGCTACAG 57.456 43.478 15.82 0.00 33.66 2.74
4949 7777 7.660617 GTGTCATATGGATCTGAACATGAAGAT 59.339 37.037 0.00 4.85 35.84 2.40
4978 7806 7.445096 TCCACATAAAGCTACAATGTCATATGG 59.555 37.037 2.13 4.97 31.60 2.74
4981 7809 9.224267 ACATAAAGCTACAATGTCATATGGATC 57.776 33.333 2.13 0.00 0.00 3.36
4983 7811 7.741027 AAAGCTACAATGTCATATGGATCAG 57.259 36.000 2.13 0.00 0.00 2.90
4984 7812 6.676990 AGCTACAATGTCATATGGATCAGA 57.323 37.500 2.13 0.00 0.00 3.27
4985 7813 7.071069 AGCTACAATGTCATATGGATCAGAA 57.929 36.000 2.13 0.00 0.00 3.02
4986 7814 7.512130 AGCTACAATGTCATATGGATCAGAAA 58.488 34.615 2.13 0.00 0.00 2.52
4987 7815 7.994911 AGCTACAATGTCATATGGATCAGAAAA 59.005 33.333 2.13 0.00 0.00 2.29
4988 7816 8.790718 GCTACAATGTCATATGGATCAGAAAAT 58.209 33.333 2.13 0.00 0.00 1.82
4990 7818 8.756486 ACAATGTCATATGGATCAGAAAATGA 57.244 30.769 2.13 0.00 43.70 2.57
4991 7819 9.192642 ACAATGTCATATGGATCAGAAAATGAA 57.807 29.630 2.13 0.00 42.53 2.57
4992 7820 9.678941 CAATGTCATATGGATCAGAAAATGAAG 57.321 33.333 2.13 0.00 42.53 3.02
4993 7821 9.636789 AATGTCATATGGATCAGAAAATGAAGA 57.363 29.630 2.13 0.00 42.53 2.87
4994 7822 8.672823 TGTCATATGGATCAGAAAATGAAGAG 57.327 34.615 2.13 0.00 42.53 2.85
4995 7823 7.718314 TGTCATATGGATCAGAAAATGAAGAGG 59.282 37.037 2.13 0.00 42.53 3.69
4996 7824 7.935755 GTCATATGGATCAGAAAATGAAGAGGA 59.064 37.037 2.13 0.00 42.53 3.71
4997 7825 8.666821 TCATATGGATCAGAAAATGAAGAGGAT 58.333 33.333 2.13 0.00 42.53 3.24
4998 7826 8.948145 CATATGGATCAGAAAATGAAGAGGATC 58.052 37.037 0.00 0.00 42.53 3.36
4999 7827 5.688807 TGGATCAGAAAATGAAGAGGATCC 58.311 41.667 2.48 2.48 45.97 3.36
5000 7828 5.688807 GGATCAGAAAATGAAGAGGATCCA 58.311 41.667 15.82 0.00 45.40 3.41
5001 7829 5.530543 GGATCAGAAAATGAAGAGGATCCAC 59.469 44.000 15.82 8.01 45.40 4.02
5002 7830 5.503634 TCAGAAAATGAAGAGGATCCACA 57.496 39.130 15.82 8.83 34.02 4.17
5003 7831 6.070951 TCAGAAAATGAAGAGGATCCACAT 57.929 37.500 15.82 10.74 34.02 3.21
5004 7832 7.199167 TCAGAAAATGAAGAGGATCCACATA 57.801 36.000 15.82 0.00 34.02 2.29
5005 7833 7.632861 TCAGAAAATGAAGAGGATCCACATAA 58.367 34.615 15.82 0.00 34.02 1.90
5006 7834 8.108999 TCAGAAAATGAAGAGGATCCACATAAA 58.891 33.333 15.82 0.00 34.02 1.40
5007 7835 8.404000 CAGAAAATGAAGAGGATCCACATAAAG 58.596 37.037 15.82 1.20 32.64 1.85
5008 7836 6.705863 AAATGAAGAGGATCCACATAAAGC 57.294 37.500 15.82 0.00 32.64 3.51
5009 7837 5.643421 ATGAAGAGGATCCACATAAAGCT 57.357 39.130 15.82 0.00 33.66 3.74
5010 7838 6.753913 ATGAAGAGGATCCACATAAAGCTA 57.246 37.500 15.82 0.00 33.66 3.32
5011 7839 5.918608 TGAAGAGGATCCACATAAAGCTAC 58.081 41.667 15.82 0.00 33.66 3.58
5012 7840 5.425217 TGAAGAGGATCCACATAAAGCTACA 59.575 40.000 15.82 0.00 33.66 2.74
5013 7841 5.543507 AGAGGATCCACATAAAGCTACAG 57.456 43.478 15.82 0.00 33.66 2.74
5014 7842 4.965532 AGAGGATCCACATAAAGCTACAGT 59.034 41.667 15.82 0.00 33.66 3.55
5015 7843 5.028549 AGGATCCACATAAAGCTACAGTG 57.971 43.478 15.82 0.00 0.00 3.66
5016 7844 4.471386 AGGATCCACATAAAGCTACAGTGT 59.529 41.667 15.82 0.00 0.00 3.55
5017 7845 4.811557 GGATCCACATAAAGCTACAGTGTC 59.188 45.833 6.95 0.00 0.00 3.67
5018 7846 4.882842 TCCACATAAAGCTACAGTGTCA 57.117 40.909 0.00 0.00 0.00 3.58
5019 7847 5.420725 TCCACATAAAGCTACAGTGTCAT 57.579 39.130 0.00 0.00 0.00 3.06
5020 7848 6.538945 TCCACATAAAGCTACAGTGTCATA 57.461 37.500 0.00 0.00 0.00 2.15
5021 7849 7.124573 TCCACATAAAGCTACAGTGTCATAT 57.875 36.000 0.00 0.00 0.00 1.78
5022 7850 6.986231 TCCACATAAAGCTACAGTGTCATATG 59.014 38.462 0.00 5.72 0.00 1.78
5023 7851 6.203530 CCACATAAAGCTACAGTGTCATATGG 59.796 42.308 0.00 0.00 0.00 2.74
5024 7852 6.986231 CACATAAAGCTACAGTGTCATATGGA 59.014 38.462 0.00 0.00 0.00 3.41
5025 7853 7.658982 CACATAAAGCTACAGTGTCATATGGAT 59.341 37.037 0.00 0.00 0.00 3.41
5026 7854 7.875041 ACATAAAGCTACAGTGTCATATGGATC 59.125 37.037 0.00 0.00 0.00 3.36
5027 7855 6.491714 AAAGCTACAGTGTCATATGGATCT 57.508 37.500 0.00 0.00 0.00 2.75
5039 7867 7.660617 GTGTCATATGGATCTGAACATGAAGAT 59.339 37.037 0.00 4.85 35.84 2.40
5091 7919 4.141528 GGTCAGAACATGAAGAGGATCCAT 60.142 45.833 15.82 0.00 40.43 3.41
5113 7941 6.095860 CCATATAAAGCCACCATGTCATATGG 59.904 42.308 2.13 0.00 44.54 2.74
5310 8142 0.244721 TCACCATGCTCACTCTCACG 59.755 55.000 0.00 0.00 0.00 4.35
5455 8287 2.620367 CCAAATCCATCCCGTTCTCCAA 60.620 50.000 0.00 0.00 0.00 3.53
5477 8309 1.953138 GCGCCTCTCCGACATCATG 60.953 63.158 0.00 0.00 0.00 3.07
5654 8486 4.719369 GTCCGTGCGTTCTCGGCT 62.719 66.667 0.00 0.00 45.91 5.52
5669 8501 3.512516 GCTGCCAATCTGCCCGTC 61.513 66.667 0.00 0.00 34.04 4.79
5717 8549 1.680105 GGATGTACAACGTGACGGCG 61.680 60.000 10.66 4.80 37.94 6.46
5811 8646 2.528378 ACACCGCCAACCCTACCT 60.528 61.111 0.00 0.00 0.00 3.08
5846 8681 1.817099 CCTTGAGAGCGTGGATGGC 60.817 63.158 0.00 0.00 0.00 4.40
5957 8792 2.190578 CTCAAGCCGGGGGATGTC 59.809 66.667 2.18 0.00 0.00 3.06
5969 8804 2.819595 GATGTCGCCGTGTGCCAT 60.820 61.111 0.00 0.00 36.24 4.40
5975 8810 2.625823 CGCCGTGTGCCATTTCCTT 61.626 57.895 0.00 0.00 36.24 3.36
6008 8843 3.249189 ATCTGGGTGCGTGGTGGT 61.249 61.111 0.00 0.00 0.00 4.16
6029 8864 2.393768 GCAGGGAGACACACATGCG 61.394 63.158 0.00 0.00 0.00 4.73
6033 8868 2.393768 GGAGACACACATGCGGCAG 61.394 63.158 9.25 3.35 0.00 4.85
6049 8884 0.466124 GCAGCCCGTTAGAAGAGGAT 59.534 55.000 0.00 0.00 0.00 3.24
6050 8885 1.687123 GCAGCCCGTTAGAAGAGGATA 59.313 52.381 0.00 0.00 0.00 2.59
6105 8940 3.729217 CGTGACACATACATCGGTACATC 59.271 47.826 6.37 0.00 30.94 3.06
6121 8956 5.997746 CGGTACATCATATGGGTGAATCTTT 59.002 40.000 13.64 0.00 33.60 2.52
6127 8962 8.686334 ACATCATATGGGTGAATCTTTGTAAAC 58.314 33.333 13.64 0.00 33.60 2.01
6131 8966 3.252215 TGGGTGAATCTTTGTAAACTGCG 59.748 43.478 0.00 0.00 0.00 5.18
6137 8972 5.468409 TGAATCTTTGTAAACTGCGTGATGA 59.532 36.000 0.00 0.00 0.00 2.92
6151 8986 7.633621 ACTGCGTGATGATGTTATGAAATAAG 58.366 34.615 0.00 0.00 39.94 1.73
6166 9003 5.197451 TGAAATAAGTGGTGTGTGGAAGTT 58.803 37.500 0.00 0.00 0.00 2.66
6239 9076 6.916360 ATTGTTGTAAGAACATCACCCATT 57.084 33.333 0.00 0.00 35.54 3.16
6397 9247 6.971726 TGGACTATATACGGACTGAAATGT 57.028 37.500 0.00 0.00 0.00 2.71
6424 9274 4.653868 ACGAACACCCCAAAACATGTATA 58.346 39.130 0.00 0.00 0.00 1.47
6493 9346 8.271458 TGAATGCAGGGAGTATATTCTAAACAA 58.729 33.333 0.00 0.00 0.00 2.83
6690 9968 9.416284 TCCAGTCTGTATATTGACTACACATTA 57.584 33.333 9.34 0.00 41.06 1.90
6700 9978 5.011090 TGACTACACATTATGAGTCCTGC 57.989 43.478 0.00 0.00 35.92 4.85
6701 9979 4.466015 TGACTACACATTATGAGTCCTGCA 59.534 41.667 0.00 0.00 35.92 4.41
6702 9980 5.129320 TGACTACACATTATGAGTCCTGCAT 59.871 40.000 0.00 0.00 35.92 3.96
6703 9981 5.363101 ACTACACATTATGAGTCCTGCATG 58.637 41.667 0.00 0.00 0.00 4.06
6704 9982 2.947652 ACACATTATGAGTCCTGCATGC 59.052 45.455 11.82 11.82 0.00 4.06
6705 9983 3.211865 CACATTATGAGTCCTGCATGCT 58.788 45.455 20.33 0.00 0.00 3.79
6783 10062 3.379372 TGCTTCTTGCCAGATCTATTTGC 59.621 43.478 0.00 0.00 42.00 3.68
6791 10235 6.321848 TGCCAGATCTATTTGCAATATGTG 57.678 37.500 0.00 1.23 0.00 3.21
6795 10239 7.168637 GCCAGATCTATTTGCAATATGTGTTTG 59.831 37.037 0.00 0.00 0.00 2.93
6820 10264 9.800433 TGTATTTGCCATCATGTTTATTAACTG 57.200 29.630 0.00 0.00 35.24 3.16
6878 10322 6.255453 ACAGTTTTTCCATGACAAATTTCACG 59.745 34.615 0.00 0.00 0.00 4.35
6941 10386 3.470567 CGTGCTCCTGTTCGTCGC 61.471 66.667 0.00 0.00 0.00 5.19
6945 10390 2.508891 GCTCCTGTTCGTCGCATCG 61.509 63.158 0.00 0.00 0.00 3.84
6954 10399 1.342555 TCGTCGCATCGAACGAAAAT 58.657 45.000 14.49 0.00 41.93 1.82
6958 10403 3.223157 GTCGCATCGAACGAAAATGTTT 58.777 40.909 14.49 0.00 41.93 2.83
6986 10431 0.874390 GAAACAGCCATCGCAACTCA 59.126 50.000 0.00 0.00 37.52 3.41
7023 10469 1.390123 CACTCATAGCGACCAAACACG 59.610 52.381 0.00 0.00 0.00 4.49
7040 10486 6.372103 CCAAACACGTACCCTACATTCATTAA 59.628 38.462 0.00 0.00 0.00 1.40
7045 10491 7.662669 ACACGTACCCTACATTCATTAAGTTTT 59.337 33.333 0.00 0.00 0.00 2.43
7046 10492 7.960738 CACGTACCCTACATTCATTAAGTTTTG 59.039 37.037 0.00 0.00 0.00 2.44
7109 10557 5.567138 ATTTCGATTTTGGACTCCATGAC 57.433 39.130 0.00 0.00 31.53 3.06
7133 10581 9.712305 GACATTCATAGTTGCATTACCTATAGT 57.288 33.333 0.00 0.00 0.00 2.12
7219 10669 7.795047 TCCATGCACTTGAGATTATCTAGAAA 58.205 34.615 0.00 0.00 35.11 2.52
7225 10675 7.984617 GCACTTGAGATTATCTAGAAACTTCCT 59.015 37.037 0.00 0.00 35.11 3.36
7231 10681 9.320352 GAGATTATCTAGAAACTTCCTTGAACC 57.680 37.037 0.00 0.00 0.00 3.62
7238 10688 6.208988 AGAAACTTCCTTGAACCAGTTTTC 57.791 37.500 0.00 0.00 30.87 2.29
7244 10718 6.095580 ACTTCCTTGAACCAGTTTTCTCTTTC 59.904 38.462 0.00 0.00 0.00 2.62
7245 10719 4.887655 TCCTTGAACCAGTTTTCTCTTTCC 59.112 41.667 0.00 0.00 0.00 3.13
7248 10722 6.451064 TTGAACCAGTTTTCTCTTTCCTTC 57.549 37.500 0.00 0.00 0.00 3.46
7256 10730 7.918033 CCAGTTTTCTCTTTCCTTCTTCTTTTC 59.082 37.037 0.00 0.00 0.00 2.29
7257 10731 7.641802 CAGTTTTCTCTTTCCTTCTTCTTTTCG 59.358 37.037 0.00 0.00 0.00 3.46
7258 10732 7.337184 AGTTTTCTCTTTCCTTCTTCTTTTCGT 59.663 33.333 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.849804 TGTTAATTCAAAGTCAGGCTAGATC 57.150 36.000 0.00 0.00 0.00 2.75
35 36 1.271856 TGTCTTGTAATCCTGGCCGA 58.728 50.000 0.00 0.00 0.00 5.54
55 56 6.963083 ACCTATTCTCTTTGTATACGCTCT 57.037 37.500 0.00 0.00 0.00 4.09
56 57 9.525409 TTTTACCTATTCTCTTTGTATACGCTC 57.475 33.333 0.00 0.00 0.00 5.03
108 109 5.950758 AAATTGTGACACTTATTACGCCA 57.049 34.783 7.20 0.00 0.00 5.69
149 150 1.529865 GCCGCACTTTCGAACTAAGTT 59.470 47.619 0.00 0.00 33.73 2.66
150 151 1.145803 GCCGCACTTTCGAACTAAGT 58.854 50.000 0.00 0.00 36.31 2.24
163 164 0.601057 ACCCAAAATAAGTGCCGCAC 59.399 50.000 16.04 16.04 34.10 5.34
168 169 2.233676 CCCTCCAACCCAAAATAAGTGC 59.766 50.000 0.00 0.00 0.00 4.40
180 181 2.234168 GACTGAACTACTCCCTCCAACC 59.766 54.545 0.00 0.00 0.00 3.77
181 182 2.094649 CGACTGAACTACTCCCTCCAAC 60.095 54.545 0.00 0.00 0.00 3.77
220 221 1.657487 CGCTGCACCCTATCGTACG 60.657 63.158 9.53 9.53 0.00 3.67
237 238 3.926616 ACCAGTTAGGATCTGAAACACG 58.073 45.455 0.00 0.00 41.22 4.49
255 256 2.096248 GAATATTGCAAACCCGGACCA 58.904 47.619 0.73 0.00 0.00 4.02
316 321 5.705813 TGTTAGTCTGTAAACAACACACG 57.294 39.130 0.00 0.00 32.69 4.49
317 322 8.605746 TGTAATGTTAGTCTGTAAACAACACAC 58.394 33.333 0.00 0.00 38.95 3.82
478 521 0.606401 CCAAGGCGAAGTGACACCAT 60.606 55.000 0.84 0.00 0.00 3.55
481 524 0.531974 TGACCAAGGCGAAGTGACAC 60.532 55.000 0.00 0.00 0.00 3.67
506 551 0.390340 CGACGCCCCCATGAGATATG 60.390 60.000 0.00 0.00 0.00 1.78
507 552 1.544825 CCGACGCCCCCATGAGATAT 61.545 60.000 0.00 0.00 0.00 1.63
508 553 2.207229 CCGACGCCCCCATGAGATA 61.207 63.158 0.00 0.00 0.00 1.98
509 554 3.550431 CCGACGCCCCCATGAGAT 61.550 66.667 0.00 0.00 0.00 2.75
529 575 6.925718 CCTTCTTTTCTTCCTTTTAGCCAAAG 59.074 38.462 0.00 0.00 41.64 2.77
535 581 9.302345 GTTTTGTCCTTCTTTTCTTCCTTTTAG 57.698 33.333 0.00 0.00 0.00 1.85
543 590 6.437477 AGAACTGGTTTTGTCCTTCTTTTCTT 59.563 34.615 0.00 0.00 0.00 2.52
544 591 5.952347 AGAACTGGTTTTGTCCTTCTTTTCT 59.048 36.000 0.00 0.00 0.00 2.52
545 592 6.208988 AGAACTGGTTTTGTCCTTCTTTTC 57.791 37.500 0.00 0.00 0.00 2.29
546 593 6.437477 AGAAGAACTGGTTTTGTCCTTCTTTT 59.563 34.615 0.00 0.00 36.46 2.27
547 594 5.952347 AGAAGAACTGGTTTTGTCCTTCTTT 59.048 36.000 0.00 0.00 36.46 2.52
556 603 6.076981 ACAAGCATAGAAGAACTGGTTTTG 57.923 37.500 0.00 0.00 0.00 2.44
604 651 3.370061 GTGTGTTACATTTCCGGTAGCTC 59.630 47.826 0.00 0.00 0.00 4.09
645 692 8.068892 ACTAAACCAAACAAAATACACCTTGA 57.931 30.769 0.00 0.00 0.00 3.02
667 714 4.973168 ACTGCTGGTGAAAATCTTGACTA 58.027 39.130 0.00 0.00 0.00 2.59
710 763 2.046892 AGCTGTGTGGCGTGATCC 60.047 61.111 0.00 0.00 37.29 3.36
711 764 0.173481 TAGAGCTGTGTGGCGTGATC 59.827 55.000 0.00 0.00 37.29 2.92
719 772 5.836821 TTACTGGATACTAGAGCTGTGTG 57.163 43.478 0.00 0.00 37.61 3.82
735 794 8.015658 CCTCGTGTTTCTTTCTTTATTTACTGG 58.984 37.037 0.00 0.00 0.00 4.00
736 795 8.770828 TCCTCGTGTTTCTTTCTTTATTTACTG 58.229 33.333 0.00 0.00 0.00 2.74
737 796 8.897872 TCCTCGTGTTTCTTTCTTTATTTACT 57.102 30.769 0.00 0.00 0.00 2.24
738 797 9.756461 GATCCTCGTGTTTCTTTCTTTATTTAC 57.244 33.333 0.00 0.00 0.00 2.01
739 798 8.653338 CGATCCTCGTGTTTCTTTCTTTATTTA 58.347 33.333 0.00 0.00 34.72 1.40
740 799 7.519002 CGATCCTCGTGTTTCTTTCTTTATTT 58.481 34.615 0.00 0.00 34.72 1.40
741 800 6.402226 GCGATCCTCGTGTTTCTTTCTTTATT 60.402 38.462 0.00 0.00 42.81 1.40
742 801 5.063564 GCGATCCTCGTGTTTCTTTCTTTAT 59.936 40.000 0.00 0.00 42.81 1.40
763 822 4.530710 AGTTAAGAAGTACACCATGCGA 57.469 40.909 0.00 0.00 0.00 5.10
904 965 6.701145 ATCATGTAGATACTCGACAAGTGT 57.299 37.500 0.00 0.00 39.11 3.55
907 968 8.346300 ACAGTAATCATGTAGATACTCGACAAG 58.654 37.037 0.00 0.00 35.71 3.16
924 985 6.535150 GTGAGCTAGTTGCATAACAGTAATCA 59.465 38.462 0.00 0.00 45.94 2.57
945 1092 6.726299 TCCTATTTATAGTCCAGATGGGTGAG 59.274 42.308 0.00 0.00 38.11 3.51
950 1097 6.574465 CGGGTTCCTATTTATAGTCCAGATGG 60.574 46.154 0.00 0.00 0.00 3.51
971 1118 2.621526 GGAGAAAACATGTTGAACGGGT 59.378 45.455 12.82 0.00 0.00 5.28
975 1122 4.097892 ACTGGTGGAGAAAACATGTTGAAC 59.902 41.667 12.82 6.82 0.00 3.18
997 1145 4.152402 CCATGTTGTGTTGCTAGTGAGTAC 59.848 45.833 0.00 0.00 0.00 2.73
1012 1160 3.679917 CGGCAGAAGTAGATCCATGTTGT 60.680 47.826 0.00 0.00 0.00 3.32
1034 1182 3.623060 TCACCAATAAAAGCGAGATGAGC 59.377 43.478 0.00 0.00 0.00 4.26
1066 1214 8.370182 ACACACACATATATGATTAGAGCATGA 58.630 33.333 19.63 0.00 0.00 3.07
1080 1228 2.734079 CGCACACACACACACACATATA 59.266 45.455 0.00 0.00 0.00 0.86
1083 1231 1.720894 CGCACACACACACACACAT 59.279 52.632 0.00 0.00 0.00 3.21
1134 1282 4.918060 CACACACACGCACGCACG 62.918 66.667 0.00 0.00 39.50 5.34
1138 1286 0.314738 GTAACACACACACACGCACG 60.315 55.000 0.00 0.00 0.00 5.34
1142 1290 2.121009 TGATCGTAACACACACACACG 58.879 47.619 0.00 0.00 0.00 4.49
1168 1316 1.131218 CGTGCATCACAACGAGCAG 59.869 57.895 0.00 0.00 37.72 4.24
1268 1416 4.201679 CCAGTACGCCGCCGATGA 62.202 66.667 0.00 0.00 38.29 2.92
1305 1646 1.419012 TGATAGCTGGAGGCATTGGAG 59.581 52.381 0.00 0.00 44.79 3.86
1649 1990 3.571571 CTGCACGTGTAGTACAAAGCTA 58.428 45.455 23.65 8.49 0.00 3.32
2195 2539 8.018537 TCCATACAACTATGCAGTACATACTT 57.981 34.615 0.00 0.00 40.38 2.24
2368 2766 1.072806 TCTGTGCCATGCTCTTGAGTT 59.927 47.619 0.00 0.00 0.00 3.01
2811 3215 3.525537 TGCGTGAGAAGAATTGGATCTC 58.474 45.455 0.00 5.27 39.98 2.75
3111 5750 9.656323 ACCACTTAAATGAGGTCACTATATCTA 57.344 33.333 0.00 0.00 0.00 1.98
3112 5751 8.554490 ACCACTTAAATGAGGTCACTATATCT 57.446 34.615 0.00 0.00 0.00 1.98
3113 5752 9.614792 AAACCACTTAAATGAGGTCACTATATC 57.385 33.333 0.00 0.00 32.05 1.63
3114 5753 9.975218 AAAACCACTTAAATGAGGTCACTATAT 57.025 29.630 0.00 0.00 32.05 0.86
3115 5754 9.226606 CAAAACCACTTAAATGAGGTCACTATA 57.773 33.333 0.00 0.00 32.05 1.31
3116 5755 7.942341 TCAAAACCACTTAAATGAGGTCACTAT 59.058 33.333 0.00 0.00 32.05 2.12
3170 5809 9.733556 TGTTATGAAAAGTGTGTAGGTATCAAT 57.266 29.630 0.00 0.00 0.00 2.57
3190 5829 5.634859 GGATTGCAAACCAAGAGTTGTTATG 59.365 40.000 20.02 0.00 39.19 1.90
3211 5850 2.286935 ACACCCCCTTAGTGATGGAT 57.713 50.000 0.00 0.00 38.63 3.41
3223 5862 1.533033 CCTGGAACCAAACACCCCC 60.533 63.158 0.00 0.00 0.00 5.40
3224 5863 1.533033 CCCTGGAACCAAACACCCC 60.533 63.158 0.00 0.00 0.00 4.95
3225 5864 0.826256 GTCCCTGGAACCAAACACCC 60.826 60.000 0.00 0.00 0.00 4.61
3226 5865 0.185175 AGTCCCTGGAACCAAACACC 59.815 55.000 0.00 0.00 0.00 4.16
3227 5866 2.067365 AAGTCCCTGGAACCAAACAC 57.933 50.000 0.00 0.00 0.00 3.32
3228 5867 2.838637 AAAGTCCCTGGAACCAAACA 57.161 45.000 0.00 0.00 0.00 2.83
3246 5885 7.234661 ACTTTTTCTAGTCCCAACACAAAAA 57.765 32.000 0.00 0.00 0.00 1.94
3248 5887 6.445357 GACTTTTTCTAGTCCCAACACAAA 57.555 37.500 0.00 0.00 38.88 2.83
3258 5897 7.166167 TGGTTTGATAGGGACTTTTTCTAGTC 58.834 38.462 0.00 0.00 43.05 2.59
3259 5898 7.086685 TGGTTTGATAGGGACTTTTTCTAGT 57.913 36.000 0.00 0.00 41.75 2.57
3261 5900 7.780745 TGTTTGGTTTGATAGGGACTTTTTCTA 59.219 33.333 0.00 0.00 41.75 2.10
3262 5901 6.609616 TGTTTGGTTTGATAGGGACTTTTTCT 59.390 34.615 0.00 0.00 41.75 2.52
3263 5902 6.811954 TGTTTGGTTTGATAGGGACTTTTTC 58.188 36.000 0.00 0.00 41.75 2.29
3264 5903 6.800072 TGTTTGGTTTGATAGGGACTTTTT 57.200 33.333 0.00 0.00 41.75 1.94
3265 5904 6.239572 CCATGTTTGGTTTGATAGGGACTTTT 60.240 38.462 0.00 0.00 37.90 2.27
3266 5905 5.245977 CCATGTTTGGTTTGATAGGGACTTT 59.754 40.000 0.00 0.00 37.90 2.66
3267 5906 4.772100 CCATGTTTGGTTTGATAGGGACTT 59.228 41.667 0.00 0.00 37.90 3.01
3268 5907 4.344104 CCATGTTTGGTTTGATAGGGACT 58.656 43.478 0.00 0.00 39.62 3.85
3269 5908 4.718940 CCATGTTTGGTTTGATAGGGAC 57.281 45.455 0.00 0.00 38.30 4.46
3308 5947 7.200455 GTGCTTCTAAGGACTTTTAGCAAAAA 58.800 34.615 7.07 0.00 43.15 1.94
3309 5948 6.238925 GGTGCTTCTAAGGACTTTTAGCAAAA 60.239 38.462 13.12 0.00 45.42 2.44
3310 5949 5.240844 GGTGCTTCTAAGGACTTTTAGCAAA 59.759 40.000 13.12 0.00 45.42 3.68
3311 5950 4.760204 GGTGCTTCTAAGGACTTTTAGCAA 59.240 41.667 13.12 1.75 45.42 3.91
3312 5951 4.041691 AGGTGCTTCTAAGGACTTTTAGCA 59.958 41.667 13.12 9.74 45.42 3.49
3313 5952 4.580868 AGGTGCTTCTAAGGACTTTTAGC 58.419 43.478 13.12 0.00 45.42 3.09
3314 5953 6.043854 AGAGGTGCTTCTAAGGACTTTTAG 57.956 41.667 13.12 0.00 45.42 1.85
3315 5954 6.435292 AAGAGGTGCTTCTAAGGACTTTTA 57.565 37.500 13.12 0.00 45.42 1.52
3316 5955 4.984146 AGAGGTGCTTCTAAGGACTTTT 57.016 40.909 13.12 0.00 45.42 2.27
3317 5956 4.984146 AAGAGGTGCTTCTAAGGACTTT 57.016 40.909 13.12 3.63 45.42 2.66
3318 5957 4.348168 TCAAAGAGGTGCTTCTAAGGACTT 59.652 41.667 13.12 6.52 45.42 3.01
3319 5958 3.904339 TCAAAGAGGTGCTTCTAAGGACT 59.096 43.478 13.12 1.24 45.42 3.85
3320 5959 4.021016 TCTCAAAGAGGTGCTTCTAAGGAC 60.021 45.833 5.86 5.86 45.39 3.85
3321 5960 4.160329 TCTCAAAGAGGTGCTTCTAAGGA 58.840 43.478 0.00 0.00 35.24 3.36
3322 5961 4.020662 ACTCTCAAAGAGGTGCTTCTAAGG 60.021 45.833 8.71 0.00 46.45 2.69
3323 5962 5.047377 AGACTCTCAAAGAGGTGCTTCTAAG 60.047 44.000 8.71 0.00 46.45 2.18
3324 5963 4.835615 AGACTCTCAAAGAGGTGCTTCTAA 59.164 41.667 8.71 0.00 46.45 2.10
3325 5964 4.411927 AGACTCTCAAAGAGGTGCTTCTA 58.588 43.478 8.71 0.00 46.45 2.10
3326 5965 3.238597 AGACTCTCAAAGAGGTGCTTCT 58.761 45.455 8.71 0.00 46.45 2.85
3327 5966 3.676291 AGACTCTCAAAGAGGTGCTTC 57.324 47.619 8.71 0.00 46.45 3.86
3328 5967 4.429854 AAAGACTCTCAAAGAGGTGCTT 57.570 40.909 8.71 6.18 46.45 3.91
3329 5968 4.429854 AAAAGACTCTCAAAGAGGTGCT 57.570 40.909 8.71 0.83 46.45 4.40
3330 5969 4.576463 TGAAAAAGACTCTCAAAGAGGTGC 59.424 41.667 8.71 0.00 46.45 5.01
3331 5970 6.683974 TTGAAAAAGACTCTCAAAGAGGTG 57.316 37.500 8.71 0.00 46.45 4.00
3332 5971 7.703058 TTTTGAAAAAGACTCTCAAAGAGGT 57.297 32.000 8.71 0.00 46.45 3.85
3333 5972 8.246871 ACTTTTTGAAAAAGACTCTCAAAGAGG 58.753 33.333 30.55 6.26 46.45 3.69
3335 5974 8.244113 GGACTTTTTGAAAAAGACTCTCAAAGA 58.756 33.333 30.55 0.00 39.51 2.52
3336 5975 8.246871 AGGACTTTTTGAAAAAGACTCTCAAAG 58.753 33.333 30.55 7.17 39.51 2.77
3337 5976 8.122472 AGGACTTTTTGAAAAAGACTCTCAAA 57.878 30.769 30.55 0.69 37.30 2.69
3338 5977 7.703058 AGGACTTTTTGAAAAAGACTCTCAA 57.297 32.000 30.55 0.00 0.00 3.02
3339 5978 7.499232 CCTAGGACTTTTTGAAAAAGACTCTCA 59.501 37.037 30.55 14.91 0.00 3.27
3340 5979 7.041030 CCCTAGGACTTTTTGAAAAAGACTCTC 60.041 40.741 30.55 19.27 0.00 3.20
3341 5980 6.773200 CCCTAGGACTTTTTGAAAAAGACTCT 59.227 38.462 30.55 23.56 0.00 3.24
3342 5981 6.771267 TCCCTAGGACTTTTTGAAAAAGACTC 59.229 38.462 30.55 20.15 0.00 3.36
3343 5982 6.669631 TCCCTAGGACTTTTTGAAAAAGACT 58.330 36.000 30.55 26.69 0.00 3.24
3344 5983 6.954487 TCCCTAGGACTTTTTGAAAAAGAC 57.046 37.500 30.55 24.86 0.00 3.01
3377 6016 4.771054 TGTTTGGTTCTCTAGTCCTAGGAC 59.229 45.833 31.29 31.29 44.86 3.85
3378 6017 4.771054 GTGTTTGGTTCTCTAGTCCTAGGA 59.229 45.833 7.62 7.62 34.06 2.94
3379 6018 4.081586 GGTGTTTGGTTCTCTAGTCCTAGG 60.082 50.000 0.82 0.82 34.06 3.02
3380 6019 4.527038 TGGTGTTTGGTTCTCTAGTCCTAG 59.473 45.833 0.00 0.00 34.56 3.02
3381 6020 4.282703 GTGGTGTTTGGTTCTCTAGTCCTA 59.717 45.833 0.00 0.00 0.00 2.94
3382 6021 3.071167 GTGGTGTTTGGTTCTCTAGTCCT 59.929 47.826 0.00 0.00 0.00 3.85
3383 6022 3.400255 GTGGTGTTTGGTTCTCTAGTCC 58.600 50.000 0.00 0.00 0.00 3.85
3384 6023 3.071167 AGGTGGTGTTTGGTTCTCTAGTC 59.929 47.826 0.00 0.00 0.00 2.59
3385 6024 3.046374 AGGTGGTGTTTGGTTCTCTAGT 58.954 45.455 0.00 0.00 0.00 2.57
3386 6025 3.771577 AGGTGGTGTTTGGTTCTCTAG 57.228 47.619 0.00 0.00 0.00 2.43
3387 6026 4.409574 TGTTAGGTGGTGTTTGGTTCTCTA 59.590 41.667 0.00 0.00 0.00 2.43
3388 6027 3.201266 TGTTAGGTGGTGTTTGGTTCTCT 59.799 43.478 0.00 0.00 0.00 3.10
3389 6028 3.547746 TGTTAGGTGGTGTTTGGTTCTC 58.452 45.455 0.00 0.00 0.00 2.87
3390 6029 3.655615 TGTTAGGTGGTGTTTGGTTCT 57.344 42.857 0.00 0.00 0.00 3.01
3391 6030 4.929819 AATGTTAGGTGGTGTTTGGTTC 57.070 40.909 0.00 0.00 0.00 3.62
3392 6031 4.468153 ACAAATGTTAGGTGGTGTTTGGTT 59.532 37.500 0.00 0.00 32.46 3.67
3393 6032 4.027437 ACAAATGTTAGGTGGTGTTTGGT 58.973 39.130 0.00 0.00 32.46 3.67
3394 6033 4.664150 ACAAATGTTAGGTGGTGTTTGG 57.336 40.909 0.00 0.00 32.46 3.28
3397 6036 9.914834 ACATATATACAAATGTTAGGTGGTGTT 57.085 29.630 0.00 0.00 32.43 3.32
3398 6037 9.337396 CACATATATACAAATGTTAGGTGGTGT 57.663 33.333 0.00 0.00 34.12 4.16
3399 6038 8.289618 GCACATATATACAAATGTTAGGTGGTG 58.710 37.037 9.31 0.00 34.12 4.17
3400 6039 8.217799 AGCACATATATACAAATGTTAGGTGGT 58.782 33.333 7.17 7.17 34.12 4.16
3401 6040 8.621532 AGCACATATATACAAATGTTAGGTGG 57.378 34.615 9.31 0.00 34.12 4.61
3483 6135 9.705290 TTCGTGTATATGCAATAGTTCATATGT 57.295 29.630 5.72 0.00 36.76 2.29
3603 6255 9.524106 CTTTTATACTCCATACGACATGTAACA 57.476 33.333 0.00 0.00 36.44 2.41
3637 6289 6.095860 CCATTTGATTGATGACGCCCATATAT 59.904 38.462 0.00 0.00 35.17 0.86
3646 6298 5.610338 CGATCGTACCATTTGATTGATGACG 60.610 44.000 7.03 0.00 0.00 4.35
3667 6319 5.736951 TTGGGATGGAAATTTTGAACGAT 57.263 34.783 0.00 0.00 0.00 3.73
3669 6321 6.310224 GTGTATTGGGATGGAAATTTTGAACG 59.690 38.462 0.00 0.00 0.00 3.95
3708 6361 2.073816 CGTGGGAGCTTTTGACGTAAT 58.926 47.619 0.00 0.00 0.00 1.89
3711 6364 1.597027 CCGTGGGAGCTTTTGACGT 60.597 57.895 0.00 0.00 0.00 4.34
3712 6365 2.966309 GCCGTGGGAGCTTTTGACG 61.966 63.158 0.00 0.00 0.00 4.35
3725 6379 1.950909 TCAAAGGTAAGTTTGGCCGTG 59.049 47.619 0.00 0.00 37.89 4.94
3788 6445 1.628846 GGTGCTCCCACTTTCCTCTTA 59.371 52.381 0.00 0.00 41.75 2.10
3839 6530 6.207810 TGGATTTAATTTACACACTCCGCTTT 59.792 34.615 0.00 0.00 0.00 3.51
3929 6621 6.991938 TCAACTAAGCATTGCCTTTAATTGT 58.008 32.000 4.70 0.00 0.00 2.71
3977 6669 1.698532 CTAAGGGCTGGATCTGAGCAT 59.301 52.381 16.09 6.98 38.27 3.79
3978 6670 1.126488 CTAAGGGCTGGATCTGAGCA 58.874 55.000 16.09 0.00 38.27 4.26
3996 6688 8.701908 ATAATTGTTGATATCCATGTCAAGCT 57.298 30.769 0.00 0.00 38.34 3.74
4025 6717 5.238432 CAGTATATGTGGCTTAATTTGGCGA 59.762 40.000 0.00 0.00 0.00 5.54
4026 6718 5.451908 CAGTATATGTGGCTTAATTTGGCG 58.548 41.667 0.00 0.00 0.00 5.69
4027 6719 5.221224 TGCAGTATATGTGGCTTAATTTGGC 60.221 40.000 0.00 0.00 0.00 4.52
4029 6721 7.758980 TGTTTGCAGTATATGTGGCTTAATTTG 59.241 33.333 0.00 0.00 0.00 2.32
4031 6723 7.403312 TGTTTGCAGTATATGTGGCTTAATT 57.597 32.000 0.00 0.00 0.00 1.40
4032 6724 7.285172 TCATGTTTGCAGTATATGTGGCTTAAT 59.715 33.333 0.00 0.00 0.00 1.40
4034 6726 6.118852 TCATGTTTGCAGTATATGTGGCTTA 58.881 36.000 0.00 0.00 0.00 3.09
4036 6728 4.525996 TCATGTTTGCAGTATATGTGGCT 58.474 39.130 0.00 0.00 0.00 4.75
4037 6729 4.336433 ACTCATGTTTGCAGTATATGTGGC 59.664 41.667 11.49 0.00 0.00 5.01
4044 6736 5.356190 CCTCATTCACTCATGTTTGCAGTAT 59.644 40.000 0.00 0.00 0.00 2.12
4055 6747 6.039047 GCATACATTGTTCCTCATTCACTCAT 59.961 38.462 0.00 0.00 0.00 2.90
4057 6749 5.355071 TGCATACATTGTTCCTCATTCACTC 59.645 40.000 0.00 0.00 0.00 3.51
4094 6787 9.882996 AGACAATCACAAAATATATTGTATGCG 57.117 29.630 0.00 0.00 41.44 4.73
4100 6793 8.539674 TCGACGAGACAATCACAAAATATATTG 58.460 33.333 0.00 0.00 35.83 1.90
4101 6794 8.642908 TCGACGAGACAATCACAAAATATATT 57.357 30.769 0.00 0.00 0.00 1.28
4108 6801 5.666969 AAAATCGACGAGACAATCACAAA 57.333 34.783 3.01 0.00 0.00 2.83
4205 6898 7.862274 AATAATATCATCTGGAGAGGTGTGA 57.138 36.000 0.00 0.00 31.51 3.58
4232 6925 5.125417 GCCAGACTTGAGGTTATTTGCATTA 59.875 40.000 0.00 0.00 0.00 1.90
4236 6929 2.819608 TGCCAGACTTGAGGTTATTTGC 59.180 45.455 0.00 0.00 0.00 3.68
4263 6956 7.279615 TCATAGTATGATCCAATTTTCCGTGT 58.720 34.615 8.84 0.00 33.59 4.49
4277 6970 9.739276 TCCAACTTGAGTTTTTCATAGTATGAT 57.261 29.630 13.58 0.00 36.16 2.45
4278 6971 9.567776 TTCCAACTTGAGTTTTTCATAGTATGA 57.432 29.630 8.84 8.84 35.83 2.15
4339 7032 3.549625 GCCTGCTTCTTCTTCAACTTGTG 60.550 47.826 0.00 0.00 0.00 3.33
4414 7107 4.966168 TGCCTTCTAACCCATATGACACTA 59.034 41.667 3.65 0.00 0.00 2.74
4439 7132 7.739498 TGGGAGAACTTTGTTTAAGTATGTC 57.261 36.000 0.00 0.00 46.34 3.06
4447 7140 9.245481 TCTTTAAGTTTGGGAGAACTTTGTTTA 57.755 29.630 8.13 0.00 45.05 2.01
4485 7178 6.245408 TGTCTTGTTTCCTTGGCTTATATGT 58.755 36.000 0.00 0.00 0.00 2.29
4493 7186 7.035612 CCTTTATATTGTCTTGTTTCCTTGGC 58.964 38.462 0.00 0.00 0.00 4.52
4572 7310 1.420138 ACCTTCTAACCCATATGCCCG 59.580 52.381 0.00 0.00 0.00 6.13
4647 7475 9.605275 CTCATATGACACAGAGATTTCCTTTAA 57.395 33.333 0.00 0.00 0.00 1.52
4672 7500 4.668138 AGACTCTTCCTGACTTCTACCT 57.332 45.455 0.00 0.00 0.00 3.08
4681 7509 3.100671 GCTCCCTTTAGACTCTTCCTGA 58.899 50.000 0.00 0.00 0.00 3.86
4699 7527 3.281727 TCCCATATGAAACAGGTGCTC 57.718 47.619 3.65 0.00 0.00 4.26
4737 7565 6.774170 CCATATGACATGGAGATTTCCTTCAA 59.226 38.462 3.65 0.00 44.36 2.69
4739 7567 5.709164 CCCATATGACATGGAGATTTCCTTC 59.291 44.000 3.65 0.00 44.36 3.46
4752 7580 3.433598 CCTTCGTCCAACCCATATGACAT 60.434 47.826 3.65 0.00 0.00 3.06
4779 7607 9.004717 TCGGTTCAAGAATTTATTGTAATCACA 57.995 29.630 3.87 0.00 0.00 3.58
4784 7612 8.181573 GCATCTCGGTTCAAGAATTTATTGTAA 58.818 33.333 3.87 0.00 0.00 2.41
4785 7613 7.335673 TGCATCTCGGTTCAAGAATTTATTGTA 59.664 33.333 3.87 0.00 0.00 2.41
4799 7627 1.270041 GGATCCTCTGCATCTCGGTTC 60.270 57.143 3.84 0.00 0.00 3.62
4804 7632 4.613925 TTATGTGGATCCTCTGCATCTC 57.386 45.455 14.23 0.00 0.00 2.75
4844 7672 4.472470 TGTGGATCCTCTTCATGTTCAGAT 59.528 41.667 14.23 0.00 0.00 2.90
4892 7720 7.645058 TTTATGTGGATCCTCTTCAATTTCC 57.355 36.000 14.23 0.00 0.00 3.13
4897 7725 5.441718 AGCTTTATGTGGATCCTCTTCAA 57.558 39.130 14.23 4.89 0.00 2.69
4923 7751 6.988580 TCTTCATGTTCAGATCCATATGACAC 59.011 38.462 3.65 0.00 0.00 3.67
4949 7777 6.413892 TGACATTGTAGCTTTATGTGGATCA 58.586 36.000 11.35 3.06 32.94 2.92
4978 7806 6.118170 TGTGGATCCTCTTCATTTTCTGATC 58.882 40.000 14.23 0.00 32.72 2.92
4981 7809 7.870509 TTATGTGGATCCTCTTCATTTTCTG 57.129 36.000 14.23 0.00 0.00 3.02
4983 7811 7.067981 AGCTTTATGTGGATCCTCTTCATTTTC 59.932 37.037 14.23 4.08 0.00 2.29
4984 7812 6.894103 AGCTTTATGTGGATCCTCTTCATTTT 59.106 34.615 14.23 0.00 0.00 1.82
4985 7813 6.430007 AGCTTTATGTGGATCCTCTTCATTT 58.570 36.000 14.23 0.00 0.00 2.32
4986 7814 6.011122 AGCTTTATGTGGATCCTCTTCATT 57.989 37.500 14.23 0.00 0.00 2.57
4987 7815 5.643421 AGCTTTATGTGGATCCTCTTCAT 57.357 39.130 14.23 13.76 0.00 2.57
4988 7816 5.425217 TGTAGCTTTATGTGGATCCTCTTCA 59.575 40.000 14.23 7.55 0.00 3.02
4989 7817 5.918608 TGTAGCTTTATGTGGATCCTCTTC 58.081 41.667 14.23 1.81 0.00 2.87
4990 7818 5.426833 ACTGTAGCTTTATGTGGATCCTCTT 59.573 40.000 14.23 10.25 0.00 2.85
4991 7819 4.965532 ACTGTAGCTTTATGTGGATCCTCT 59.034 41.667 14.23 2.42 0.00 3.69
4992 7820 5.053145 CACTGTAGCTTTATGTGGATCCTC 58.947 45.833 14.23 10.39 0.00 3.71
4993 7821 4.471386 ACACTGTAGCTTTATGTGGATCCT 59.529 41.667 14.23 0.00 33.44 3.24
4994 7822 4.770795 ACACTGTAGCTTTATGTGGATCC 58.229 43.478 4.20 4.20 33.44 3.36
4995 7823 5.419542 TGACACTGTAGCTTTATGTGGATC 58.580 41.667 0.00 0.00 33.44 3.36
4996 7824 5.420725 TGACACTGTAGCTTTATGTGGAT 57.579 39.130 0.00 0.00 33.44 3.41
4997 7825 4.882842 TGACACTGTAGCTTTATGTGGA 57.117 40.909 0.00 0.00 33.44 4.02
4998 7826 6.203530 CCATATGACACTGTAGCTTTATGTGG 59.796 42.308 3.65 0.00 33.44 4.17
4999 7827 6.986231 TCCATATGACACTGTAGCTTTATGTG 59.014 38.462 3.65 0.00 35.09 3.21
5000 7828 7.124573 TCCATATGACACTGTAGCTTTATGT 57.875 36.000 3.65 0.00 0.00 2.29
5001 7829 8.093307 AGATCCATATGACACTGTAGCTTTATG 58.907 37.037 3.65 0.00 0.00 1.90
5002 7830 8.093307 CAGATCCATATGACACTGTAGCTTTAT 58.907 37.037 3.65 0.00 0.00 1.40
5003 7831 7.287696 TCAGATCCATATGACACTGTAGCTTTA 59.712 37.037 3.65 0.00 34.43 1.85
5004 7832 6.098838 TCAGATCCATATGACACTGTAGCTTT 59.901 38.462 3.65 0.00 34.43 3.51
5005 7833 5.600069 TCAGATCCATATGACACTGTAGCTT 59.400 40.000 3.65 0.00 34.43 3.74
5006 7834 5.143369 TCAGATCCATATGACACTGTAGCT 58.857 41.667 3.65 0.00 34.43 3.32
5007 7835 5.459536 TCAGATCCATATGACACTGTAGC 57.540 43.478 3.65 0.00 34.43 3.58
5008 7836 6.809869 TGTTCAGATCCATATGACACTGTAG 58.190 40.000 3.65 0.00 34.43 2.74
5009 7837 6.790232 TGTTCAGATCCATATGACACTGTA 57.210 37.500 3.65 1.91 34.43 2.74
5010 7838 5.682234 TGTTCAGATCCATATGACACTGT 57.318 39.130 3.65 0.00 34.43 3.55
5011 7839 6.285990 TCATGTTCAGATCCATATGACACTG 58.714 40.000 3.65 9.91 34.22 3.66
5012 7840 6.490241 TCATGTTCAGATCCATATGACACT 57.510 37.500 3.65 0.00 0.00 3.55
5013 7841 6.988580 TCTTCATGTTCAGATCCATATGACAC 59.011 38.462 3.65 0.00 0.00 3.67
5014 7842 7.128234 TCTTCATGTTCAGATCCATATGACA 57.872 36.000 3.65 0.00 0.00 3.58
5015 7843 7.876582 TCATCTTCATGTTCAGATCCATATGAC 59.123 37.037 3.65 0.00 0.00 3.06
5016 7844 7.970102 TCATCTTCATGTTCAGATCCATATGA 58.030 34.615 3.65 0.00 0.00 2.15
5017 7845 8.794335 ATCATCTTCATGTTCAGATCCATATG 57.206 34.615 0.00 0.00 0.00 1.78
5018 7846 8.047911 GGATCATCTTCATGTTCAGATCCATAT 58.952 37.037 21.06 7.93 45.78 1.78
5019 7847 7.392418 GGATCATCTTCATGTTCAGATCCATA 58.608 38.462 21.06 4.94 45.78 2.74
5020 7848 6.239396 GGATCATCTTCATGTTCAGATCCAT 58.761 40.000 21.06 10.14 45.78 3.41
5021 7849 5.618236 GGATCATCTTCATGTTCAGATCCA 58.382 41.667 21.06 7.17 45.78 3.41
5022 7850 5.469421 GTGGATCATCTTCATGTTCAGATCC 59.531 44.000 20.06 20.06 46.36 3.36
5023 7851 6.053650 TGTGGATCATCTTCATGTTCAGATC 58.946 40.000 0.00 0.00 32.31 2.75
5024 7852 5.997843 TGTGGATCATCTTCATGTTCAGAT 58.002 37.500 0.00 0.00 32.31 2.90
5025 7853 5.425196 TGTGGATCATCTTCATGTTCAGA 57.575 39.130 0.00 0.00 32.31 3.27
5026 7854 7.797038 TTATGTGGATCATCTTCATGTTCAG 57.203 36.000 0.00 0.00 37.91 3.02
5027 7855 7.201758 GCTTTATGTGGATCATCTTCATGTTCA 60.202 37.037 0.00 0.00 37.91 3.18
5039 7867 6.413892 TGACATTGTAGCTTTATGTGGATCA 58.586 36.000 11.35 3.06 32.94 2.92
5091 7919 5.074377 ACCCATATGACATGGTGGCTTTATA 59.926 40.000 3.65 0.00 37.48 0.98
5113 7941 4.227864 AGATCCTTTTCATGTCCTGACC 57.772 45.455 0.00 0.00 32.17 4.02
5146 7974 1.159285 ATGTGTCGCATGTCCTGTTG 58.841 50.000 0.00 0.00 36.26 3.33
5274 8103 2.502130 GGTGACTCCCCTCTCCTTTTAG 59.498 54.545 0.00 0.00 0.00 1.85
5416 8248 2.700773 GCAATGCCGTGGGGAAGAC 61.701 63.158 0.00 0.00 34.06 3.01
5428 8260 0.249573 CGGGATGGATTTGGCAATGC 60.250 55.000 0.00 0.00 0.00 3.56
5477 8309 2.331451 GCCGGTGCAAATATCGCC 59.669 61.111 1.90 0.00 37.47 5.54
5553 8385 3.281359 CTTTTTGGCCGGGAAGCGG 62.281 63.158 2.18 0.00 0.00 5.52
5654 8486 3.030168 ATCGACGGGCAGATTGGCA 62.030 57.895 4.99 0.00 45.76 4.92
5691 8523 2.384309 CGTTGTACATCCCGCGCAA 61.384 57.895 8.75 0.00 0.00 4.85
5717 8549 1.516603 GTCGGAGAGCTTACGCACC 60.517 63.158 0.00 0.00 36.95 5.01
5723 8555 2.478989 CGGTGAGTCGGAGAGCTTA 58.521 57.895 0.00 0.00 36.95 3.09
5969 8804 5.420725 TGATGCTGAGCTTAGTAAGGAAA 57.579 39.130 11.84 0.00 0.00 3.13
5975 8810 3.323115 CCCAGATGATGCTGAGCTTAGTA 59.677 47.826 5.83 2.65 38.14 1.82
6008 8843 0.322648 CATGTGTGTCTCCCTGCTCA 59.677 55.000 0.00 0.00 0.00 4.26
6029 8864 1.153349 CCTCTTCTAACGGGCTGCC 60.153 63.158 11.05 11.05 0.00 4.85
6033 8868 2.543238 CGTGTATCCTCTTCTAACGGGC 60.543 54.545 0.00 0.00 0.00 6.13
6049 8884 1.227409 CCACACAGGTGCACGTGTA 60.227 57.895 36.55 10.46 44.34 2.90
6073 8908 4.118480 GTGTCACGGCTCACACAA 57.882 55.556 5.81 0.00 42.20 3.33
6091 8926 5.719563 TCACCCATATGATGTACCGATGTAT 59.280 40.000 3.65 0.00 0.00 2.29
6105 8940 6.974622 GCAGTTTACAAAGATTCACCCATATG 59.025 38.462 0.00 0.00 0.00 1.78
6121 8956 5.872070 TCATAACATCATCACGCAGTTTACA 59.128 36.000 0.00 0.00 41.61 2.41
6127 8962 7.585210 CACTTATTTCATAACATCATCACGCAG 59.415 37.037 0.00 0.00 0.00 5.18
6131 8966 8.677300 ACACCACTTATTTCATAACATCATCAC 58.323 33.333 0.00 0.00 0.00 3.06
6137 8972 6.945435 TCCACACACCACTTATTTCATAACAT 59.055 34.615 0.00 0.00 0.00 2.71
6151 8986 0.655733 CGACAACTTCCACACACCAC 59.344 55.000 0.00 0.00 0.00 4.16
6166 9003 9.463443 CTCACATATTATGAAGTTCATACGACA 57.537 33.333 22.44 10.55 38.92 4.35
6216 9053 6.916360 AATGGGTGATGTTCTTACAACAAT 57.084 33.333 0.00 0.00 38.56 2.71
6280 9117 6.092955 ACTGTACGGAAAGACACTTCATAA 57.907 37.500 9.17 0.00 0.00 1.90
6381 9231 4.860352 CGTTCACACATTTCAGTCCGTATA 59.140 41.667 0.00 0.00 0.00 1.47
6397 9247 1.473278 GTTTTGGGGTGTTCGTTCACA 59.527 47.619 12.72 0.00 39.76 3.58
6524 9377 8.533569 TCTGAACAGGGCGATATATTATATCA 57.466 34.615 19.07 2.52 0.00 2.15
6525 9378 9.250624 GTTCTGAACAGGGCGATATATTATATC 57.749 37.037 15.34 12.02 0.00 1.63
6526 9379 8.758829 TGTTCTGAACAGGGCGATATATTATAT 58.241 33.333 18.69 0.00 36.25 0.86
6527 9380 8.129496 TGTTCTGAACAGGGCGATATATTATA 57.871 34.615 18.69 0.00 36.25 0.98
6528 9381 7.004555 TGTTCTGAACAGGGCGATATATTAT 57.995 36.000 18.69 0.00 36.25 1.28
6690 9968 1.489649 AGCTAAGCATGCAGGACTCAT 59.510 47.619 21.98 0.00 0.00 2.90
6697 9975 4.054671 GTCCTAGTAAGCTAAGCATGCAG 58.945 47.826 21.98 10.76 0.00 4.41
6698 9976 3.490933 CGTCCTAGTAAGCTAAGCATGCA 60.491 47.826 21.98 0.00 0.00 3.96
6699 9977 3.053455 CGTCCTAGTAAGCTAAGCATGC 58.947 50.000 10.51 10.51 0.00 4.06
6700 9978 4.276183 TCTCGTCCTAGTAAGCTAAGCATG 59.724 45.833 0.00 0.00 0.00 4.06
6701 9979 4.462133 TCTCGTCCTAGTAAGCTAAGCAT 58.538 43.478 0.00 0.00 0.00 3.79
6702 9980 3.878103 CTCTCGTCCTAGTAAGCTAAGCA 59.122 47.826 0.00 0.00 0.00 3.91
6703 9981 3.878699 ACTCTCGTCCTAGTAAGCTAAGC 59.121 47.826 0.00 0.00 0.00 3.09
6704 9982 9.439500 AATATACTCTCGTCCTAGTAAGCTAAG 57.561 37.037 0.00 0.00 32.24 2.18
6705 9983 9.790344 AAATATACTCTCGTCCTAGTAAGCTAA 57.210 33.333 0.00 0.00 32.24 3.09
6783 10062 8.544597 CATGATGGCAAATACAAACACATATTG 58.455 33.333 0.00 0.00 0.00 1.90
6795 10239 8.755018 GCAGTTAATAAACATGATGGCAAATAC 58.245 33.333 0.00 0.00 38.12 1.89
6846 10290 9.965824 ATTTGTCATGGAAAAACTGTAGTAAAG 57.034 29.630 0.00 0.00 0.00 1.85
6856 10300 6.820470 TCGTGAAATTTGTCATGGAAAAAC 57.180 33.333 0.00 0.00 35.58 2.43
6893 10337 9.386010 ACCACGCTAACTCAATATAAATACAAA 57.614 29.630 0.00 0.00 0.00 2.83
6894 10338 8.822855 CACCACGCTAACTCAATATAAATACAA 58.177 33.333 0.00 0.00 0.00 2.41
6895 10339 7.439955 CCACCACGCTAACTCAATATAAATACA 59.560 37.037 0.00 0.00 0.00 2.29
6912 10356 4.235762 AGCACGAACCACCACGCT 62.236 61.111 0.00 0.00 0.00 5.07
6941 10386 5.059587 CCACATCAAACATTTTCGTTCGATG 59.940 40.000 3.78 3.78 43.10 3.84
6945 10390 3.987220 CCCCACATCAAACATTTTCGTTC 59.013 43.478 0.00 0.00 0.00 3.95
6954 10399 1.686052 GCTGTTTCCCCACATCAAACA 59.314 47.619 0.00 0.00 37.62 2.83
6958 10403 0.409092 ATGGCTGTTTCCCCACATCA 59.591 50.000 0.00 0.00 33.17 3.07
6986 10431 3.196901 TGAGTGACCTACGTGCCAAATAT 59.803 43.478 0.00 0.00 0.00 1.28
7040 10486 4.120946 TGGGTTGGCCTAATACAAAACT 57.879 40.909 3.32 0.00 34.45 2.66
7045 10491 3.201266 CCTACTTGGGTTGGCCTAATACA 59.799 47.826 3.32 0.00 34.63 2.29
7046 10492 3.816994 CCTACTTGGGTTGGCCTAATAC 58.183 50.000 3.32 0.00 34.63 1.89
7144 10592 7.812669 GGACAATTCCGAATTTGTTTTGTCTAT 59.187 33.333 20.62 0.00 40.60 1.98
7219 10669 5.117406 AGAGAAAACTGGTTCAAGGAAGT 57.883 39.130 0.00 0.00 0.00 3.01
7225 10675 6.187682 AGAAGGAAAGAGAAAACTGGTTCAA 58.812 36.000 0.00 0.00 0.00 2.69
7231 10681 7.641802 CGAAAAGAAGAAGGAAAGAGAAAACTG 59.358 37.037 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.