Multiple sequence alignment - TraesCS5A01G347500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G347500 chr5A 100.000 3766 0 0 1 3766 550248573 550252338 0.000000e+00 6955.0
1 TraesCS5A01G347500 chr5A 91.484 411 19 5 1814 2214 549953965 549954369 5.500000e-153 551.0
2 TraesCS5A01G347500 chr5A 85.659 516 36 13 986 1484 549953073 549953567 3.360000e-140 508.0
3 TraesCS5A01G347500 chr5A 79.019 591 81 21 147 731 522366852 522366299 7.690000e-97 364.0
4 TraesCS5A01G347500 chr5A 85.714 133 18 1 15 146 515939844 515939976 5.070000e-29 139.0
5 TraesCS5A01G347500 chr5A 80.303 132 22 3 2366 2495 99602120 99602249 3.100000e-16 97.1
6 TraesCS5A01G347500 chr5B 86.023 1574 105 51 881 2375 529987220 529988757 0.000000e+00 1581.0
7 TraesCS5A01G347500 chr5B 83.597 695 68 22 1528 2210 529687464 529688124 8.940000e-171 610.0
8 TraesCS5A01G347500 chr5B 93.888 409 14 3 1814 2214 529609294 529609699 1.160000e-169 606.0
9 TraesCS5A01G347500 chr5B 82.609 598 41 38 1115 1671 529608644 529609219 1.580000e-128 470.0
10 TraesCS5A01G347500 chr5B 84.551 479 34 22 1026 1484 529686917 529687375 4.470000e-119 438.0
11 TraesCS5A01G347500 chr5B 84.821 112 7 3 881 982 529686689 529686800 1.850000e-18 104.0
12 TraesCS5A01G347500 chr5B 89.189 74 8 0 881 954 529608334 529608407 4.010000e-15 93.5
13 TraesCS5A01G347500 chr5B 79.839 124 22 3 2370 2491 639236227 639236105 1.860000e-13 87.9
14 TraesCS5A01G347500 chr4D 86.207 754 96 4 2868 3615 502028131 502028882 0.000000e+00 809.0
15 TraesCS5A01G347500 chr4D 79.910 891 121 33 2869 3741 138763025 138762175 5.380000e-168 601.0
16 TraesCS5A01G347500 chr6D 85.118 719 99 4 2902 3615 10432553 10433268 0.000000e+00 728.0
17 TraesCS5A01G347500 chr6D 88.976 127 13 1 21 147 468879940 468879815 5.040000e-34 156.0
18 TraesCS5A01G347500 chr2B 83.943 766 96 15 2863 3615 13972801 13973552 0.000000e+00 708.0
19 TraesCS5A01G347500 chr2B 86.567 134 18 0 13 146 629502541 629502408 8.430000e-32 148.0
20 TraesCS5A01G347500 chr2B 88.462 104 12 0 43 146 56034511 56034408 3.950000e-25 126.0
21 TraesCS5A01G347500 chr3A 80.246 896 131 30 2869 3739 727311956 727312830 1.910000e-177 632.0
22 TraesCS5A01G347500 chr3D 82.307 763 102 16 147 883 436038814 436039569 6.860000e-177 630.0
23 TraesCS5A01G347500 chr3D 79.480 731 134 9 2894 3613 286854313 286853588 4.340000e-139 505.0
24 TraesCS5A01G347500 chr3D 82.143 140 25 0 1 140 20807919 20808058 1.840000e-23 121.0
25 TraesCS5A01G347500 chr5D 83.092 692 110 3 2926 3611 480970874 480971564 1.150000e-174 623.0
26 TraesCS5A01G347500 chr5D 83.172 725 62 41 1530 2215 435933757 435934460 3.220000e-170 608.0
27 TraesCS5A01G347500 chr5D 86.697 436 21 9 1067 1482 435933231 435933649 2.060000e-122 449.0
28 TraesCS5A01G347500 chr5D 83.333 96 8 8 1189 1280 565703009 565702918 8.670000e-12 82.4
29 TraesCS5A01G347500 chr3B 81.565 754 119 9 147 887 136812442 136811696 4.160000e-169 604.0
30 TraesCS5A01G347500 chr3B 78.723 94 15 4 793 881 642840338 642840245 1.460000e-04 58.4
31 TraesCS5A01G347500 chr4A 81.408 753 123 6 2869 3615 246716225 246716966 1.940000e-167 599.0
32 TraesCS5A01G347500 chr4A 83.054 596 86 9 147 736 519176206 519176792 9.270000e-146 527.0
33 TraesCS5A01G347500 chr4A 83.333 96 8 8 1189 1280 607261959 607261868 8.670000e-12 82.4
34 TraesCS5A01G347500 chr1B 82.244 704 91 20 147 820 520396280 520395581 9.070000e-161 577.0
35 TraesCS5A01G347500 chr1B 78.068 766 123 26 153 879 329746709 329745950 3.450000e-120 442.0
36 TraesCS5A01G347500 chr1B 86.301 146 19 1 1 146 362303325 362303469 1.400000e-34 158.0
37 TraesCS5A01G347500 chr1A 80.632 759 114 23 147 878 486895098 486895850 1.180000e-154 556.0
38 TraesCS5A01G347500 chr7B 79.740 770 121 19 147 883 451168935 451169702 3.330000e-145 525.0
39 TraesCS5A01G347500 chr7D 82.631 593 90 8 147 728 433780574 433781164 2.590000e-141 512.0
40 TraesCS5A01G347500 chr1D 81.967 610 97 7 147 744 38363094 38363702 4.340000e-139 505.0
41 TraesCS5A01G347500 chr2D 78.219 730 141 12 2894 3612 611929134 611928412 5.740000e-123 451.0
42 TraesCS5A01G347500 chr2D 97.368 38 1 0 783 820 20725811 20725774 8.730000e-07 65.8
43 TraesCS5A01G347500 chr6A 86.986 146 19 0 1 146 3558808 3558663 8.370000e-37 165.0
44 TraesCS5A01G347500 chr6B 85.211 142 21 0 6 147 143410355 143410496 3.030000e-31 147.0
45 TraesCS5A01G347500 chr7A 86.508 126 17 0 21 146 701155233 701155108 5.070000e-29 139.0
46 TraesCS5A01G347500 chrUn 78.448 116 21 3 2368 2481 86295616 86295729 5.220000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G347500 chr5A 550248573 550252338 3765 False 6955.000000 6955 100.0000 1 3766 1 chr5A.!!$F3 3765
1 TraesCS5A01G347500 chr5A 549953073 549954369 1296 False 529.500000 551 88.5715 986 2214 2 chr5A.!!$F4 1228
2 TraesCS5A01G347500 chr5A 522366299 522366852 553 True 364.000000 364 79.0190 147 731 1 chr5A.!!$R1 584
3 TraesCS5A01G347500 chr5B 529987220 529988757 1537 False 1581.000000 1581 86.0230 881 2375 1 chr5B.!!$F1 1494
4 TraesCS5A01G347500 chr5B 529608334 529609699 1365 False 389.833333 606 88.5620 881 2214 3 chr5B.!!$F2 1333
5 TraesCS5A01G347500 chr5B 529686689 529688124 1435 False 384.000000 610 84.3230 881 2210 3 chr5B.!!$F3 1329
6 TraesCS5A01G347500 chr4D 502028131 502028882 751 False 809.000000 809 86.2070 2868 3615 1 chr4D.!!$F1 747
7 TraesCS5A01G347500 chr4D 138762175 138763025 850 True 601.000000 601 79.9100 2869 3741 1 chr4D.!!$R1 872
8 TraesCS5A01G347500 chr6D 10432553 10433268 715 False 728.000000 728 85.1180 2902 3615 1 chr6D.!!$F1 713
9 TraesCS5A01G347500 chr2B 13972801 13973552 751 False 708.000000 708 83.9430 2863 3615 1 chr2B.!!$F1 752
10 TraesCS5A01G347500 chr3A 727311956 727312830 874 False 632.000000 632 80.2460 2869 3739 1 chr3A.!!$F1 870
11 TraesCS5A01G347500 chr3D 436038814 436039569 755 False 630.000000 630 82.3070 147 883 1 chr3D.!!$F2 736
12 TraesCS5A01G347500 chr3D 286853588 286854313 725 True 505.000000 505 79.4800 2894 3613 1 chr3D.!!$R1 719
13 TraesCS5A01G347500 chr5D 480970874 480971564 690 False 623.000000 623 83.0920 2926 3611 1 chr5D.!!$F1 685
14 TraesCS5A01G347500 chr5D 435933231 435934460 1229 False 528.500000 608 84.9345 1067 2215 2 chr5D.!!$F2 1148
15 TraesCS5A01G347500 chr3B 136811696 136812442 746 True 604.000000 604 81.5650 147 887 1 chr3B.!!$R1 740
16 TraesCS5A01G347500 chr4A 246716225 246716966 741 False 599.000000 599 81.4080 2869 3615 1 chr4A.!!$F1 746
17 TraesCS5A01G347500 chr4A 519176206 519176792 586 False 527.000000 527 83.0540 147 736 1 chr4A.!!$F2 589
18 TraesCS5A01G347500 chr1B 520395581 520396280 699 True 577.000000 577 82.2440 147 820 1 chr1B.!!$R2 673
19 TraesCS5A01G347500 chr1B 329745950 329746709 759 True 442.000000 442 78.0680 153 879 1 chr1B.!!$R1 726
20 TraesCS5A01G347500 chr1A 486895098 486895850 752 False 556.000000 556 80.6320 147 878 1 chr1A.!!$F1 731
21 TraesCS5A01G347500 chr7B 451168935 451169702 767 False 525.000000 525 79.7400 147 883 1 chr7B.!!$F1 736
22 TraesCS5A01G347500 chr7D 433780574 433781164 590 False 512.000000 512 82.6310 147 728 1 chr7D.!!$F1 581
23 TraesCS5A01G347500 chr1D 38363094 38363702 608 False 505.000000 505 81.9670 147 744 1 chr1D.!!$F1 597
24 TraesCS5A01G347500 chr2D 611928412 611929134 722 True 451.000000 451 78.2190 2894 3612 1 chr2D.!!$R2 718

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
37 38 0.037605 GACACCAACCGGGACTAGTG 60.038 60.0 6.32 8.59 41.15 2.74 F
836 908 0.108424 GCGAAGAGACCAGTCTGCAT 60.108 55.0 4.74 0.00 40.61 3.96 F
1702 2017 0.032615 ACACCCAACCACAACCACAT 60.033 50.0 0.00 0.00 0.00 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1543 1813 0.317479 CGGTCGGAGAAACCTCAGTT 59.683 55.0 0.00 0.0 39.69 3.16 R
2277 2693 0.106669 TAGCTAGCTCGCTGGGAAGA 60.107 55.0 23.26 0.0 41.12 2.87 R
3085 3528 0.032912 TAGAGCCCCGTATGACCACA 60.033 55.0 0.00 0.0 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.949842 AACCCGTACTAGAGGTTTGAC 57.050 47.619 0.00 0.00 41.07 3.18
21 22 2.880443 ACCCGTACTAGAGGTTTGACA 58.120 47.619 0.00 0.00 0.00 3.58
22 23 2.560105 ACCCGTACTAGAGGTTTGACAC 59.440 50.000 0.00 0.00 0.00 3.67
30 31 3.439008 GGTTTGACACCAACCGGG 58.561 61.111 6.32 0.00 46.42 5.73
31 32 1.152922 GGTTTGACACCAACCGGGA 60.153 57.895 6.32 0.00 46.42 5.14
32 33 1.449726 GGTTTGACACCAACCGGGAC 61.450 60.000 6.32 0.00 46.42 4.46
33 34 0.464916 GTTTGACACCAACCGGGACT 60.465 55.000 6.32 0.00 41.15 3.85
34 35 1.129917 TTTGACACCAACCGGGACTA 58.870 50.000 6.32 0.00 41.15 2.59
35 36 0.682852 TTGACACCAACCGGGACTAG 59.317 55.000 6.32 0.00 41.15 2.57
36 37 0.470456 TGACACCAACCGGGACTAGT 60.470 55.000 6.32 0.00 41.15 2.57
37 38 0.037605 GACACCAACCGGGACTAGTG 60.038 60.000 6.32 8.59 41.15 2.74
38 39 0.470456 ACACCAACCGGGACTAGTGA 60.470 55.000 6.32 0.00 41.15 3.41
39 40 0.246635 CACCAACCGGGACTAGTGAG 59.753 60.000 6.32 0.00 41.15 3.51
40 41 1.218316 CCAACCGGGACTAGTGAGC 59.782 63.158 6.32 0.00 40.01 4.26
41 42 1.153823 CAACCGGGACTAGTGAGCG 60.154 63.158 6.32 0.00 0.00 5.03
42 43 3.003113 AACCGGGACTAGTGAGCGC 62.003 63.158 6.32 0.00 0.00 5.92
43 44 4.208686 CCGGGACTAGTGAGCGCC 62.209 72.222 2.29 0.00 0.00 6.53
44 45 4.554363 CGGGACTAGTGAGCGCCG 62.554 72.222 2.29 0.00 0.00 6.46
45 46 4.874977 GGGACTAGTGAGCGCCGC 62.875 72.222 2.29 0.00 0.00 6.53
46 47 4.874977 GGACTAGTGAGCGCCGCC 62.875 72.222 4.98 0.00 0.00 6.13
47 48 4.874977 GACTAGTGAGCGCCGCCC 62.875 72.222 4.98 0.00 0.00 6.13
58 59 4.547367 GCCGCCCGCCTAGATGTT 62.547 66.667 0.00 0.00 0.00 2.71
59 60 2.588877 CCGCCCGCCTAGATGTTG 60.589 66.667 0.00 0.00 0.00 3.33
60 61 2.588877 CGCCCGCCTAGATGTTGG 60.589 66.667 0.00 0.00 0.00 3.77
61 62 2.908015 GCCCGCCTAGATGTTGGA 59.092 61.111 0.00 0.00 0.00 3.53
62 63 1.223487 GCCCGCCTAGATGTTGGAA 59.777 57.895 0.00 0.00 0.00 3.53
63 64 1.095807 GCCCGCCTAGATGTTGGAAC 61.096 60.000 0.00 0.00 0.00 3.62
64 65 0.463833 CCCGCCTAGATGTTGGAACC 60.464 60.000 0.00 0.00 0.00 3.62
65 66 0.810031 CCGCCTAGATGTTGGAACCG 60.810 60.000 0.00 0.00 0.00 4.44
66 67 0.810031 CGCCTAGATGTTGGAACCGG 60.810 60.000 0.00 0.00 0.00 5.28
67 68 1.095807 GCCTAGATGTTGGAACCGGC 61.096 60.000 0.00 0.00 0.00 6.13
68 69 0.251916 CCTAGATGTTGGAACCGGCA 59.748 55.000 0.00 0.00 0.00 5.69
69 70 1.369625 CTAGATGTTGGAACCGGCAC 58.630 55.000 0.00 0.00 0.00 5.01
70 71 0.981183 TAGATGTTGGAACCGGCACT 59.019 50.000 0.00 0.00 0.00 4.40
71 72 0.981183 AGATGTTGGAACCGGCACTA 59.019 50.000 0.00 0.00 0.00 2.74
72 73 1.349688 AGATGTTGGAACCGGCACTAA 59.650 47.619 0.00 0.00 0.00 2.24
73 74 2.026262 AGATGTTGGAACCGGCACTAAT 60.026 45.455 0.00 0.00 0.00 1.73
74 75 1.529226 TGTTGGAACCGGCACTAATG 58.471 50.000 0.00 0.00 0.00 1.90
75 76 1.072489 TGTTGGAACCGGCACTAATGA 59.928 47.619 0.00 0.00 0.00 2.57
76 77 2.290641 TGTTGGAACCGGCACTAATGAT 60.291 45.455 0.00 0.00 0.00 2.45
77 78 2.325583 TGGAACCGGCACTAATGATC 57.674 50.000 0.00 0.00 0.00 2.92
78 79 1.557371 TGGAACCGGCACTAATGATCA 59.443 47.619 0.00 0.00 0.00 2.92
79 80 2.172505 TGGAACCGGCACTAATGATCAT 59.827 45.455 0.00 1.18 0.00 2.45
80 81 3.389656 TGGAACCGGCACTAATGATCATA 59.610 43.478 9.04 0.00 0.00 2.15
81 82 4.041567 TGGAACCGGCACTAATGATCATAT 59.958 41.667 9.04 2.30 0.00 1.78
82 83 5.003804 GGAACCGGCACTAATGATCATATT 58.996 41.667 9.04 0.00 0.00 1.28
83 84 6.170506 GGAACCGGCACTAATGATCATATTA 58.829 40.000 9.04 0.00 0.00 0.98
84 85 6.313905 GGAACCGGCACTAATGATCATATTAG 59.686 42.308 9.04 11.20 43.21 1.73
86 87 7.476540 ACCGGCACTAATGATCATATTAGTA 57.523 36.000 17.36 3.34 46.67 1.82
87 88 7.321153 ACCGGCACTAATGATCATATTAGTAC 58.679 38.462 17.36 13.37 46.67 2.73
88 89 6.757010 CCGGCACTAATGATCATATTAGTACC 59.243 42.308 19.98 19.98 46.67 3.34
89 90 7.757097 GGCACTAATGATCATATTAGTACCG 57.243 40.000 17.15 9.93 46.67 4.02
90 91 6.757010 GGCACTAATGATCATATTAGTACCGG 59.243 42.308 17.15 0.00 46.67 5.28
91 92 7.321153 GCACTAATGATCATATTAGTACCGGT 58.679 38.462 13.98 13.98 46.67 5.28
92 93 7.817962 GCACTAATGATCATATTAGTACCGGTT 59.182 37.037 15.04 0.00 46.67 4.44
93 94 9.706691 CACTAATGATCATATTAGTACCGGTTT 57.293 33.333 15.04 4.12 46.67 3.27
117 118 8.611654 TTATTTATAAACCGGGACTAATGAGC 57.388 34.615 6.32 0.00 0.00 4.26
118 119 5.881923 TTATAAACCGGGACTAATGAGCT 57.118 39.130 6.32 0.00 0.00 4.09
119 120 2.403252 AAACCGGGACTAATGAGCTG 57.597 50.000 6.32 0.00 0.00 4.24
120 121 1.568504 AACCGGGACTAATGAGCTGA 58.431 50.000 6.32 0.00 0.00 4.26
121 122 1.568504 ACCGGGACTAATGAGCTGAA 58.431 50.000 6.32 0.00 0.00 3.02
122 123 1.207329 ACCGGGACTAATGAGCTGAAC 59.793 52.381 6.32 0.00 0.00 3.18
123 124 1.207089 CCGGGACTAATGAGCTGAACA 59.793 52.381 0.00 0.00 0.00 3.18
124 125 2.158900 CCGGGACTAATGAGCTGAACAT 60.159 50.000 0.00 0.00 0.00 2.71
125 126 3.126831 CGGGACTAATGAGCTGAACATC 58.873 50.000 0.00 0.00 0.00 3.06
126 127 3.430790 CGGGACTAATGAGCTGAACATCA 60.431 47.826 0.00 0.00 0.00 3.07
127 128 4.125703 GGGACTAATGAGCTGAACATCAG 58.874 47.826 0.00 3.00 46.90 2.90
128 129 4.125703 GGACTAATGAGCTGAACATCAGG 58.874 47.826 9.25 0.00 44.43 3.86
168 169 3.941657 GAAGCGAGAAGGTGCGGCT 62.942 63.158 0.00 0.00 35.87 5.52
185 186 0.604780 GCTGCCAAGCTGACAGAGAA 60.605 55.000 6.65 0.00 46.60 2.87
198 199 4.082845 TGACAGAGAAGTTCGAGGAGATT 58.917 43.478 0.00 0.00 0.00 2.40
202 203 5.011125 ACAGAGAAGTTCGAGGAGATTTTGA 59.989 40.000 0.00 0.00 0.00 2.69
267 268 1.219393 GAGGAAGGCGGAGAGGTTG 59.781 63.158 0.00 0.00 0.00 3.77
296 297 1.407258 GATGGAGGTGACGGAGAAGAG 59.593 57.143 0.00 0.00 0.00 2.85
328 329 0.267054 AGAGAGGAGGGCCATGATCA 59.733 55.000 6.18 0.00 36.29 2.92
360 380 2.355193 GGCACTCGAGGAGAAGGCT 61.355 63.158 18.41 0.00 33.83 4.58
366 386 0.179702 TCGAGGAGAAGGCTACGCTA 59.820 55.000 0.00 0.00 0.00 4.26
374 394 4.202172 GGAGAAGGCTACGCTAGAAGAAAT 60.202 45.833 0.00 0.00 0.00 2.17
387 407 6.705381 CGCTAGAAGAAATGAGGATGAAGATT 59.295 38.462 0.00 0.00 0.00 2.40
396 420 2.545946 GAGGATGAAGATTGCCGCTAAC 59.454 50.000 0.00 0.00 0.00 2.34
412 436 2.162338 TAACGCGGAGGACACCAAGG 62.162 60.000 12.47 0.00 0.00 3.61
480 505 0.323302 TGCAATCTGTCCGCTACCAA 59.677 50.000 0.00 0.00 0.00 3.67
506 531 1.285578 GAGCGGCAGAAAGATGAGTC 58.714 55.000 1.45 0.00 0.00 3.36
507 532 0.610174 AGCGGCAGAAAGATGAGTCA 59.390 50.000 1.45 0.00 0.00 3.41
508 533 1.002430 AGCGGCAGAAAGATGAGTCAA 59.998 47.619 1.45 0.00 0.00 3.18
511 536 3.005554 CGGCAGAAAGATGAGTCAACAT 58.994 45.455 0.00 0.00 0.00 2.71
534 559 2.668632 GAAGATGGGGACGTGGCA 59.331 61.111 0.00 0.00 0.00 4.92
564 601 2.413765 GCCGCGGAGACTTCCTAG 59.586 66.667 33.48 0.00 41.67 3.02
576 613 1.534476 TTCCTAGGTGGTGGCGACA 60.534 57.895 9.08 0.00 37.07 4.35
592 630 1.009829 GACAACACCTCCATGATCGC 58.990 55.000 0.00 0.00 0.00 4.58
621 663 0.681887 TGCTAGAATGTCCGGTCCGA 60.682 55.000 14.39 0.00 0.00 4.55
641 684 2.679837 GACATGACAGAAATGCACGGAT 59.320 45.455 0.00 0.00 0.00 4.18
667 710 5.107220 GCCGTACTGATATTATTTTGGGTCG 60.107 44.000 0.00 0.00 0.00 4.79
822 887 3.554692 GCATCCGTGTCCGCGAAG 61.555 66.667 8.23 0.00 0.00 3.79
823 888 2.180769 CATCCGTGTCCGCGAAGA 59.819 61.111 8.23 0.00 0.00 2.87
828 900 2.649034 GTGTCCGCGAAGAGACCA 59.351 61.111 8.23 0.00 31.76 4.02
836 908 0.108424 GCGAAGAGACCAGTCTGCAT 60.108 55.000 4.74 0.00 40.61 3.96
886 959 2.550978 CGTTGTAGATGCCCTAACTGG 58.449 52.381 0.00 0.00 0.00 4.00
1060 1217 3.432186 GCAGTCGGCAACCAAGTT 58.568 55.556 0.00 0.00 43.97 2.66
1061 1218 2.624169 GCAGTCGGCAACCAAGTTA 58.376 52.632 0.00 0.00 43.97 2.24
1062 1219 0.517316 GCAGTCGGCAACCAAGTTAG 59.483 55.000 0.00 0.00 43.97 2.34
1063 1220 0.517316 CAGTCGGCAACCAAGTTAGC 59.483 55.000 0.00 0.00 0.00 3.09
1064 1221 0.396811 AGTCGGCAACCAAGTTAGCT 59.603 50.000 0.00 0.00 0.00 3.32
1065 1222 1.621814 AGTCGGCAACCAAGTTAGCTA 59.378 47.619 0.00 0.00 0.00 3.32
1081 1238 0.948141 GCTAAGCTAGGAGGCATGCG 60.948 60.000 12.44 0.00 34.17 4.73
1083 1240 2.383245 TAAGCTAGGAGGCATGCGGC 62.383 60.000 12.44 5.70 43.74 6.53
1288 1479 2.822764 CAAGGAGCTGGTACGTAATCC 58.177 52.381 0.00 0.00 0.00 3.01
1409 1607 2.718073 GGATCTGGTGTACGGCGGT 61.718 63.158 13.24 1.39 0.00 5.68
1448 1646 1.985116 GGAGGTCTCAGAGGCCGTT 60.985 63.158 15.77 0.00 46.90 4.44
1514 1757 0.672401 TTGTCGATCGCCTGGTTTCC 60.672 55.000 11.09 0.00 0.00 3.13
1524 1794 2.551071 CGCCTGGTTTCCTTTCTCTCTT 60.551 50.000 0.00 0.00 0.00 2.85
1526 1796 3.891977 GCCTGGTTTCCTTTCTCTCTTTT 59.108 43.478 0.00 0.00 0.00 2.27
1543 1813 4.699637 TCTTTTGCTACCTTTCTGTCGAA 58.300 39.130 0.00 0.00 0.00 3.71
1549 1819 3.675698 GCTACCTTTCTGTCGAAACTGAG 59.324 47.826 0.00 0.00 35.41 3.35
1561 1831 2.545537 AAACTGAGGTTTCTCCGACC 57.454 50.000 0.00 0.00 41.23 4.79
1587 1857 5.705905 GCCTAATTAACAGTATCCATGTCCC 59.294 44.000 0.00 0.00 0.00 4.46
1589 1859 6.710744 CCTAATTAACAGTATCCATGTCCCAC 59.289 42.308 0.00 0.00 0.00 4.61
1649 1945 1.153168 GCAGCGTCATACCCACCAT 60.153 57.895 0.00 0.00 0.00 3.55
1689 2004 2.281002 TCGACGTCTCGACACCCA 60.281 61.111 14.70 0.00 44.14 4.51
1702 2017 0.032615 ACACCCAACCACAACCACAT 60.033 50.000 0.00 0.00 0.00 3.21
1707 2025 0.673437 CAACCACAACCACATGGGAC 59.327 55.000 0.00 0.00 40.59 4.46
1710 2028 0.322456 CCACAACCACATGGGACGAT 60.322 55.000 0.00 0.00 41.15 3.73
1711 2029 0.804364 CACAACCACATGGGACGATG 59.196 55.000 0.00 0.00 41.15 3.84
1739 2065 8.533965 CATGCATGTTAATTACATAGTTTGCAC 58.466 33.333 18.91 0.00 45.37 4.57
1776 2112 4.722361 GCAGTAGCTTGTAGGACTACTT 57.278 45.455 10.51 0.00 43.05 2.24
1777 2119 5.074584 GCAGTAGCTTGTAGGACTACTTT 57.925 43.478 10.51 0.00 43.05 2.66
1778 2120 6.205101 GCAGTAGCTTGTAGGACTACTTTA 57.795 41.667 10.51 0.00 43.05 1.85
1783 2125 8.105829 AGTAGCTTGTAGGACTACTTTAGTACA 58.894 37.037 10.51 0.00 43.05 2.90
1855 2223 4.699522 GAGGTGGTGGCGGTGTCC 62.700 72.222 0.00 0.00 0.00 4.02
1873 2241 2.435938 GGGATGCACGAGCGGAAA 60.436 61.111 0.00 0.00 46.23 3.13
1991 2359 1.269726 GCATCCACACCAAACCAGTTG 60.270 52.381 0.00 0.00 36.94 3.16
2003 2371 4.201851 CCAAACCAGTTGAGCTATTCATCG 60.202 45.833 0.00 0.00 39.87 3.84
2019 2387 2.100197 CATCGACTAACTGGTCCTGGA 58.900 52.381 0.00 0.00 33.07 3.86
2106 2507 1.192146 TACGACTTCCTGCTGGCCTT 61.192 55.000 3.32 0.00 0.00 4.35
2107 2508 1.743252 CGACTTCCTGCTGGCCTTC 60.743 63.158 3.32 0.00 0.00 3.46
2108 2509 1.376466 GACTTCCTGCTGGCCTTCA 59.624 57.895 3.32 0.07 0.00 3.02
2173 2574 2.456119 CCACATCTTCGTCAGCGCC 61.456 63.158 2.29 0.00 38.14 6.53
2215 2616 1.198408 CACAAGCTCGAGGTACGTACA 59.802 52.381 26.02 5.70 43.13 2.90
2221 2622 3.944015 AGCTCGAGGTACGTACAGTTAAT 59.056 43.478 26.02 5.41 43.13 1.40
2223 2624 4.034975 GCTCGAGGTACGTACAGTTAATCT 59.965 45.833 26.02 12.43 43.13 2.40
2248 2664 1.799403 CATGCATGACTAGCTAGCTGC 59.201 52.381 27.68 25.38 43.29 5.25
2258 2674 2.097038 GCTAGCTGCGTGGTGAGTG 61.097 63.158 7.70 0.00 0.00 3.51
2259 2675 2.048222 TAGCTGCGTGGTGAGTGC 60.048 61.111 0.00 0.00 0.00 4.40
2260 2676 2.770132 CTAGCTGCGTGGTGAGTGCA 62.770 60.000 0.00 0.00 37.07 4.57
2261 2677 2.376228 TAGCTGCGTGGTGAGTGCAA 62.376 55.000 0.00 0.00 38.30 4.08
2262 2678 2.633657 CTGCGTGGTGAGTGCAAC 59.366 61.111 0.00 0.00 38.30 4.17
2263 2679 3.227372 CTGCGTGGTGAGTGCAACG 62.227 63.158 2.06 2.06 45.86 4.10
2264 2680 4.012895 GCGTGGTGAGTGCAACGG 62.013 66.667 8.30 0.00 45.86 4.44
2275 2691 4.527157 GCAACGGCATCTGCGAGC 62.527 66.667 0.00 0.00 43.26 5.03
2277 2693 2.046892 AACGGCATCTGCGAGCTT 60.047 55.556 0.00 0.00 43.26 3.74
2278 2694 2.103042 AACGGCATCTGCGAGCTTC 61.103 57.895 0.00 0.00 43.26 3.86
2279 2695 2.202851 CGGCATCTGCGAGCTTCT 60.203 61.111 0.00 0.00 43.26 2.85
2280 2696 1.812922 CGGCATCTGCGAGCTTCTT 60.813 57.895 0.00 0.00 43.26 2.52
2281 2697 1.760268 CGGCATCTGCGAGCTTCTTC 61.760 60.000 0.00 0.00 43.26 2.87
2294 2715 0.529555 CTTCTTCCCAGCGAGCTAGC 60.530 60.000 11.29 11.29 37.41 3.42
2330 2758 7.319142 ACTCTTTGATTAGTAGTCGTCCTAC 57.681 40.000 6.84 6.84 45.47 3.18
2345 2773 0.953003 CCTACCTAGCTAGCGTGTCC 59.047 60.000 15.74 0.00 0.00 4.02
2375 2803 6.877611 AAAGTTTCCACGATTGTTCAGTAT 57.122 33.333 0.00 0.00 0.00 2.12
2376 2804 6.877611 AAGTTTCCACGATTGTTCAGTATT 57.122 33.333 0.00 0.00 0.00 1.89
2377 2805 6.481954 AGTTTCCACGATTGTTCAGTATTC 57.518 37.500 0.00 0.00 0.00 1.75
2378 2806 5.411669 AGTTTCCACGATTGTTCAGTATTCC 59.588 40.000 0.00 0.00 0.00 3.01
2379 2807 3.869065 TCCACGATTGTTCAGTATTCCC 58.131 45.455 0.00 0.00 0.00 3.97
2380 2808 3.517901 TCCACGATTGTTCAGTATTCCCT 59.482 43.478 0.00 0.00 0.00 4.20
2381 2809 3.871594 CCACGATTGTTCAGTATTCCCTC 59.128 47.826 0.00 0.00 0.00 4.30
2382 2810 3.871594 CACGATTGTTCAGTATTCCCTCC 59.128 47.826 0.00 0.00 0.00 4.30
2383 2811 3.123804 CGATTGTTCAGTATTCCCTCCG 58.876 50.000 0.00 0.00 0.00 4.63
2384 2812 3.430374 CGATTGTTCAGTATTCCCTCCGT 60.430 47.826 0.00 0.00 0.00 4.69
2385 2813 3.328382 TTGTTCAGTATTCCCTCCGTG 57.672 47.619 0.00 0.00 0.00 4.94
2386 2814 1.066430 TGTTCAGTATTCCCTCCGTGC 60.066 52.381 0.00 0.00 0.00 5.34
2387 2815 1.066430 GTTCAGTATTCCCTCCGTGCA 60.066 52.381 0.00 0.00 0.00 4.57
2388 2816 1.271856 TCAGTATTCCCTCCGTGCAA 58.728 50.000 0.00 0.00 0.00 4.08
2389 2817 1.626321 TCAGTATTCCCTCCGTGCAAA 59.374 47.619 0.00 0.00 0.00 3.68
2390 2818 2.039216 TCAGTATTCCCTCCGTGCAAAA 59.961 45.455 0.00 0.00 0.00 2.44
2391 2819 2.817258 CAGTATTCCCTCCGTGCAAAAA 59.183 45.455 0.00 0.00 0.00 1.94
2411 2839 5.372343 AAAAACTTCTCAAATTTGCCCCT 57.628 34.783 13.54 0.00 0.00 4.79
2412 2840 5.372343 AAAACTTCTCAAATTTGCCCCTT 57.628 34.783 13.54 0.00 0.00 3.95
2413 2841 6.493189 AAAACTTCTCAAATTTGCCCCTTA 57.507 33.333 13.54 0.00 0.00 2.69
2414 2842 6.493189 AAACTTCTCAAATTTGCCCCTTAA 57.507 33.333 13.54 1.03 0.00 1.85
2415 2843 6.493189 AACTTCTCAAATTTGCCCCTTAAA 57.507 33.333 13.54 0.00 0.00 1.52
2416 2844 6.686484 ACTTCTCAAATTTGCCCCTTAAAT 57.314 33.333 13.54 0.00 0.00 1.40
2417 2845 6.466812 ACTTCTCAAATTTGCCCCTTAAATG 58.533 36.000 13.54 0.00 0.00 2.32
2418 2846 6.269769 ACTTCTCAAATTTGCCCCTTAAATGA 59.730 34.615 13.54 0.00 0.00 2.57
2419 2847 6.678568 TCTCAAATTTGCCCCTTAAATGAA 57.321 33.333 13.54 0.00 0.00 2.57
2420 2848 7.256494 TCTCAAATTTGCCCCTTAAATGAAT 57.744 32.000 13.54 0.00 0.00 2.57
2421 2849 8.372877 TCTCAAATTTGCCCCTTAAATGAATA 57.627 30.769 13.54 0.00 0.00 1.75
2422 2850 8.991275 TCTCAAATTTGCCCCTTAAATGAATAT 58.009 29.630 13.54 0.00 0.00 1.28
2430 2858 8.948401 TGCCCCTTAAATGAATATATTTAGCA 57.052 30.769 0.00 0.00 34.87 3.49
2431 2859 8.802267 TGCCCCTTAAATGAATATATTTAGCAC 58.198 33.333 0.00 0.00 34.87 4.40
2432 2860 9.025041 GCCCCTTAAATGAATATATTTAGCACT 57.975 33.333 0.00 0.00 34.87 4.40
2476 2904 8.994429 TTCATTTAAGACACAAAGCTTTTTCA 57.006 26.923 9.53 0.00 0.00 2.69
2477 2905 8.633075 TCATTTAAGACACAAAGCTTTTTCAG 57.367 30.769 9.53 0.33 0.00 3.02
2478 2906 8.465999 TCATTTAAGACACAAAGCTTTTTCAGA 58.534 29.630 9.53 0.00 0.00 3.27
2479 2907 8.534778 CATTTAAGACACAAAGCTTTTTCAGAC 58.465 33.333 9.53 0.61 0.00 3.51
2480 2908 4.278678 AGACACAAAGCTTTTTCAGACG 57.721 40.909 9.53 0.00 0.00 4.18
2481 2909 3.938963 AGACACAAAGCTTTTTCAGACGA 59.061 39.130 9.53 0.00 0.00 4.20
2482 2910 4.394920 AGACACAAAGCTTTTTCAGACGAA 59.605 37.500 9.53 0.00 0.00 3.85
2483 2911 4.662145 ACACAAAGCTTTTTCAGACGAAG 58.338 39.130 9.53 0.00 31.28 3.79
2484 2912 4.394920 ACACAAAGCTTTTTCAGACGAAGA 59.605 37.500 9.53 0.00 31.28 2.87
2485 2913 5.106317 ACACAAAGCTTTTTCAGACGAAGAA 60.106 36.000 9.53 0.00 31.28 2.52
2486 2914 5.799936 CACAAAGCTTTTTCAGACGAAGAAA 59.200 36.000 9.53 0.00 33.48 2.52
2487 2915 6.021153 CACAAAGCTTTTTCAGACGAAGAAAG 60.021 38.462 9.53 0.00 36.45 2.62
2488 2916 5.819825 AAGCTTTTTCAGACGAAGAAAGT 57.180 34.783 0.00 0.00 36.45 2.66
2489 2917 6.920569 AAGCTTTTTCAGACGAAGAAAGTA 57.079 33.333 0.00 0.00 36.45 2.24
2490 2918 6.288426 AGCTTTTTCAGACGAAGAAAGTAC 57.712 37.500 0.00 0.00 36.45 2.73
2491 2919 5.050972 AGCTTTTTCAGACGAAGAAAGTACG 60.051 40.000 0.00 0.00 36.45 3.67
2492 2920 5.276726 GCTTTTTCAGACGAAGAAAGTACGT 60.277 40.000 0.00 0.00 42.84 3.57
2493 2921 6.074676 GCTTTTTCAGACGAAGAAAGTACGTA 60.075 38.462 0.00 0.00 40.29 3.57
2494 2922 7.515684 GCTTTTTCAGACGAAGAAAGTACGTAA 60.516 37.037 0.00 0.00 40.29 3.18
2495 2923 6.738352 TTTCAGACGAAGAAAGTACGTAAC 57.262 37.500 0.00 0.00 40.29 2.50
2496 2924 5.679734 TCAGACGAAGAAAGTACGTAACT 57.320 39.130 0.00 0.00 41.49 2.24
2497 2925 5.446709 TCAGACGAAGAAAGTACGTAACTG 58.553 41.667 0.00 0.00 38.88 3.16
2498 2926 5.008019 TCAGACGAAGAAAGTACGTAACTGT 59.992 40.000 0.00 0.00 38.88 3.55
2499 2927 5.684626 CAGACGAAGAAAGTACGTAACTGTT 59.315 40.000 0.00 0.00 38.88 3.16
2500 2928 5.684626 AGACGAAGAAAGTACGTAACTGTTG 59.315 40.000 2.69 0.00 38.88 3.33
2501 2929 5.581605 ACGAAGAAAGTACGTAACTGTTGA 58.418 37.500 2.69 0.00 38.88 3.18
2502 2930 6.211515 ACGAAGAAAGTACGTAACTGTTGAT 58.788 36.000 2.69 0.00 38.88 2.57
2503 2931 6.143438 ACGAAGAAAGTACGTAACTGTTGATG 59.857 38.462 2.69 0.00 38.88 3.07
2504 2932 6.143438 CGAAGAAAGTACGTAACTGTTGATGT 59.857 38.462 2.69 1.68 38.88 3.06
2505 2933 7.404139 AAGAAAGTACGTAACTGTTGATGTC 57.596 36.000 2.69 0.00 38.88 3.06
2506 2934 5.924825 AGAAAGTACGTAACTGTTGATGTCC 59.075 40.000 2.69 0.00 38.88 4.02
2507 2935 4.859304 AGTACGTAACTGTTGATGTCCA 57.141 40.909 2.69 0.00 36.93 4.02
2508 2936 5.401531 AGTACGTAACTGTTGATGTCCAT 57.598 39.130 2.69 0.00 36.93 3.41
2509 2937 5.790593 AGTACGTAACTGTTGATGTCCATT 58.209 37.500 2.69 0.00 36.93 3.16
2510 2938 6.228258 AGTACGTAACTGTTGATGTCCATTT 58.772 36.000 2.69 0.00 36.93 2.32
2511 2939 5.607119 ACGTAACTGTTGATGTCCATTTC 57.393 39.130 2.69 0.00 0.00 2.17
2512 2940 5.305585 ACGTAACTGTTGATGTCCATTTCT 58.694 37.500 2.69 0.00 0.00 2.52
2513 2941 5.763204 ACGTAACTGTTGATGTCCATTTCTT 59.237 36.000 2.69 0.00 0.00 2.52
2514 2942 6.262273 ACGTAACTGTTGATGTCCATTTCTTT 59.738 34.615 2.69 0.00 0.00 2.52
2515 2943 6.578545 CGTAACTGTTGATGTCCATTTCTTTG 59.421 38.462 2.69 0.00 0.00 2.77
2516 2944 5.458041 ACTGTTGATGTCCATTTCTTTGG 57.542 39.130 0.00 0.00 38.18 3.28
2517 2945 4.281688 ACTGTTGATGTCCATTTCTTTGGG 59.718 41.667 0.00 0.00 37.37 4.12
2518 2946 3.577848 TGTTGATGTCCATTTCTTTGGGG 59.422 43.478 0.00 0.00 37.37 4.96
2519 2947 2.178580 TGATGTCCATTTCTTTGGGGC 58.821 47.619 0.00 0.00 37.37 5.80
2520 2948 1.134946 GATGTCCATTTCTTTGGGGCG 59.865 52.381 0.00 0.00 37.37 6.13
2521 2949 1.215382 GTCCATTTCTTTGGGGCGC 59.785 57.895 0.00 0.00 37.37 6.53
2522 2950 1.228706 TCCATTTCTTTGGGGCGCA 60.229 52.632 10.83 0.00 37.37 6.09
2523 2951 1.216178 CCATTTCTTTGGGGCGCAG 59.784 57.895 10.83 0.00 32.80 5.18
2524 2952 1.216178 CATTTCTTTGGGGCGCAGG 59.784 57.895 10.83 2.40 0.00 4.85
2525 2953 1.076549 ATTTCTTTGGGGCGCAGGA 59.923 52.632 10.83 4.85 0.00 3.86
2526 2954 0.967380 ATTTCTTTGGGGCGCAGGAG 60.967 55.000 10.83 7.45 0.00 3.69
2527 2955 2.351924 TTTCTTTGGGGCGCAGGAGT 62.352 55.000 10.83 0.00 0.00 3.85
2528 2956 1.485294 TTCTTTGGGGCGCAGGAGTA 61.485 55.000 10.83 0.00 0.00 2.59
2529 2957 1.745489 CTTTGGGGCGCAGGAGTAC 60.745 63.158 10.83 0.00 0.00 2.73
2530 2958 3.599285 TTTGGGGCGCAGGAGTACG 62.599 63.158 10.83 0.00 0.00 3.67
2532 2960 4.814294 GGGGCGCAGGAGTACGTG 62.814 72.222 10.83 0.00 35.36 4.49
2533 2961 4.814294 GGGCGCAGGAGTACGTGG 62.814 72.222 10.83 0.00 33.23 4.94
2537 2965 4.065281 GCAGGAGTACGTGGCGGT 62.065 66.667 0.00 0.00 33.23 5.68
2538 2966 2.126071 CAGGAGTACGTGGCGGTG 60.126 66.667 0.00 0.00 0.00 4.94
2539 2967 3.379445 AGGAGTACGTGGCGGTGG 61.379 66.667 0.00 0.00 0.00 4.61
2540 2968 3.376078 GGAGTACGTGGCGGTGGA 61.376 66.667 0.00 0.00 0.00 4.02
2541 2969 2.181021 GAGTACGTGGCGGTGGAG 59.819 66.667 0.00 0.00 0.00 3.86
2542 2970 3.352338 GAGTACGTGGCGGTGGAGG 62.352 68.421 0.00 0.00 0.00 4.30
2543 2971 3.376078 GTACGTGGCGGTGGAGGA 61.376 66.667 0.00 0.00 0.00 3.71
2544 2972 3.066190 TACGTGGCGGTGGAGGAG 61.066 66.667 0.00 0.00 0.00 3.69
2547 2975 4.083862 GTGGCGGTGGAGGAGGAC 62.084 72.222 0.00 0.00 0.00 3.85
2550 2978 4.131088 GCGGTGGAGGAGGACGAC 62.131 72.222 0.00 0.00 0.00 4.34
2551 2979 3.450115 CGGTGGAGGAGGACGACC 61.450 72.222 0.00 0.00 33.81 4.79
2552 2980 3.075641 GGTGGAGGAGGACGACCC 61.076 72.222 0.00 0.00 36.73 4.46
2553 2981 3.075641 GTGGAGGAGGACGACCCC 61.076 72.222 0.00 1.75 36.73 4.95
2554 2982 4.753662 TGGAGGAGGACGACCCCG 62.754 72.222 0.00 0.00 42.50 5.73
2578 3006 2.752358 CCAAGCTGCTGTGGGAGA 59.248 61.111 17.66 0.00 32.36 3.71
2579 3007 1.302285 CCAAGCTGCTGTGGGAGAT 59.698 57.895 17.66 0.00 32.36 2.75
2580 3008 0.747283 CCAAGCTGCTGTGGGAGATC 60.747 60.000 17.66 0.00 32.36 2.75
2581 3009 1.088340 CAAGCTGCTGTGGGAGATCG 61.088 60.000 1.35 0.00 32.36 3.69
2582 3010 1.260538 AAGCTGCTGTGGGAGATCGA 61.261 55.000 1.35 0.00 32.36 3.59
2583 3011 1.047596 AGCTGCTGTGGGAGATCGAT 61.048 55.000 0.00 0.00 32.36 3.59
2584 3012 0.599728 GCTGCTGTGGGAGATCGATC 60.600 60.000 17.91 17.91 32.36 3.69
2585 3013 0.749049 CTGCTGTGGGAGATCGATCA 59.251 55.000 26.47 4.22 32.36 2.92
2586 3014 0.749049 TGCTGTGGGAGATCGATCAG 59.251 55.000 26.47 15.38 0.00 2.90
2587 3015 0.599728 GCTGTGGGAGATCGATCAGC 60.600 60.000 26.47 20.72 40.66 4.26
2588 3016 0.749049 CTGTGGGAGATCGATCAGCA 59.251 55.000 26.47 15.21 0.00 4.41
2589 3017 0.461548 TGTGGGAGATCGATCAGCAC 59.538 55.000 26.47 18.77 0.00 4.40
2590 3018 0.749649 GTGGGAGATCGATCAGCACT 59.250 55.000 26.47 5.98 0.00 4.40
2591 3019 1.137872 GTGGGAGATCGATCAGCACTT 59.862 52.381 26.47 5.20 0.00 3.16
2592 3020 1.137675 TGGGAGATCGATCAGCACTTG 59.862 52.381 26.47 0.00 0.00 3.16
2593 3021 1.410517 GGGAGATCGATCAGCACTTGA 59.589 52.381 26.47 0.00 40.85 3.02
2595 3023 3.494048 GGGAGATCGATCAGCACTTGATT 60.494 47.826 26.47 2.11 46.51 2.57
2596 3024 4.262207 GGGAGATCGATCAGCACTTGATTA 60.262 45.833 26.47 0.00 46.51 1.75
2597 3025 5.292765 GGAGATCGATCAGCACTTGATTAA 58.707 41.667 26.47 0.00 46.51 1.40
2598 3026 5.931146 GGAGATCGATCAGCACTTGATTAAT 59.069 40.000 26.47 0.89 46.51 1.40
2599 3027 6.426328 GGAGATCGATCAGCACTTGATTAATT 59.574 38.462 26.47 0.21 46.51 1.40
2600 3028 7.600375 GGAGATCGATCAGCACTTGATTAATTA 59.400 37.037 26.47 0.00 46.51 1.40
2601 3029 8.304202 AGATCGATCAGCACTTGATTAATTAC 57.696 34.615 26.47 0.00 46.51 1.89
2602 3030 6.510746 TCGATCAGCACTTGATTAATTACG 57.489 37.500 0.00 0.00 46.51 3.18
2603 3031 5.051039 TCGATCAGCACTTGATTAATTACGC 60.051 40.000 0.00 0.00 46.51 4.42
2604 3032 5.050769 CGATCAGCACTTGATTAATTACGCT 60.051 40.000 0.00 0.00 46.51 5.07
2605 3033 6.143919 CGATCAGCACTTGATTAATTACGCTA 59.856 38.462 0.00 0.00 46.51 4.26
2606 3034 6.828502 TCAGCACTTGATTAATTACGCTAG 57.171 37.500 0.00 0.00 0.00 3.42
2607 3035 6.338146 TCAGCACTTGATTAATTACGCTAGT 58.662 36.000 0.00 0.00 0.00 2.57
2608 3036 6.475727 TCAGCACTTGATTAATTACGCTAGTC 59.524 38.462 0.00 0.00 0.00 2.59
2609 3037 6.255670 CAGCACTTGATTAATTACGCTAGTCA 59.744 38.462 0.00 0.00 0.00 3.41
2610 3038 6.477033 AGCACTTGATTAATTACGCTAGTCAG 59.523 38.462 0.00 0.00 0.00 3.51
2611 3039 6.255887 GCACTTGATTAATTACGCTAGTCAGT 59.744 38.462 0.00 0.00 0.00 3.41
2612 3040 7.434307 GCACTTGATTAATTACGCTAGTCAGTA 59.566 37.037 0.00 0.00 0.00 2.74
2613 3041 8.959058 CACTTGATTAATTACGCTAGTCAGTAG 58.041 37.037 0.00 0.00 0.00 2.57
2614 3042 8.684520 ACTTGATTAATTACGCTAGTCAGTAGT 58.315 33.333 0.00 0.00 0.00 2.73
2615 3043 9.171701 CTTGATTAATTACGCTAGTCAGTAGTC 57.828 37.037 0.00 0.00 0.00 2.59
2616 3044 8.217131 TGATTAATTACGCTAGTCAGTAGTCA 57.783 34.615 0.00 0.00 0.00 3.41
2617 3045 8.127327 TGATTAATTACGCTAGTCAGTAGTCAC 58.873 37.037 0.00 0.00 0.00 3.67
2618 3046 4.897025 ATTACGCTAGTCAGTAGTCACC 57.103 45.455 0.00 0.00 0.00 4.02
2619 3047 2.493414 ACGCTAGTCAGTAGTCACCT 57.507 50.000 0.00 0.00 0.00 4.00
2620 3048 3.623906 ACGCTAGTCAGTAGTCACCTA 57.376 47.619 0.00 0.00 0.00 3.08
2621 3049 3.269178 ACGCTAGTCAGTAGTCACCTAC 58.731 50.000 0.00 0.00 43.32 3.18
2636 3064 9.059260 GTAGTCACCTACTTTTTCATTTTACCA 57.941 33.333 0.00 0.00 40.41 3.25
2637 3065 7.937649 AGTCACCTACTTTTTCATTTTACCAC 58.062 34.615 0.00 0.00 33.35 4.16
2638 3066 6.854381 GTCACCTACTTTTTCATTTTACCACG 59.146 38.462 0.00 0.00 0.00 4.94
2639 3067 5.627780 CACCTACTTTTTCATTTTACCACGC 59.372 40.000 0.00 0.00 0.00 5.34
2640 3068 5.533528 ACCTACTTTTTCATTTTACCACGCT 59.466 36.000 0.00 0.00 0.00 5.07
2641 3069 6.040054 ACCTACTTTTTCATTTTACCACGCTT 59.960 34.615 0.00 0.00 0.00 4.68
2642 3070 6.921307 CCTACTTTTTCATTTTACCACGCTTT 59.079 34.615 0.00 0.00 0.00 3.51
2643 3071 8.077386 CCTACTTTTTCATTTTACCACGCTTTA 58.923 33.333 0.00 0.00 0.00 1.85
2644 3072 7.924103 ACTTTTTCATTTTACCACGCTTTAG 57.076 32.000 0.00 0.00 0.00 1.85
2645 3073 6.419710 ACTTTTTCATTTTACCACGCTTTAGC 59.580 34.615 0.00 0.00 37.78 3.09
2646 3074 5.699097 TTTCATTTTACCACGCTTTAGCT 57.301 34.783 0.00 0.00 39.32 3.32
2647 3075 4.939509 TCATTTTACCACGCTTTAGCTC 57.060 40.909 0.00 0.00 39.32 4.09
2648 3076 3.687698 TCATTTTACCACGCTTTAGCTCC 59.312 43.478 0.00 0.00 39.32 4.70
2649 3077 1.717194 TTTACCACGCTTTAGCTCCG 58.283 50.000 0.00 0.00 39.32 4.63
2650 3078 0.108520 TTACCACGCTTTAGCTCCGG 60.109 55.000 0.00 0.00 39.32 5.14
2651 3079 1.252904 TACCACGCTTTAGCTCCGGT 61.253 55.000 0.00 10.22 39.32 5.28
2652 3080 2.100631 CCACGCTTTAGCTCCGGTG 61.101 63.158 0.00 0.00 39.32 4.94
2653 3081 2.434359 ACGCTTTAGCTCCGGTGC 60.434 61.111 20.71 20.71 39.32 5.01
2654 3082 2.434185 CGCTTTAGCTCCGGTGCA 60.434 61.111 28.68 13.07 39.32 4.57
2655 3083 1.815421 CGCTTTAGCTCCGGTGCAT 60.815 57.895 28.68 16.45 39.32 3.96
2656 3084 0.529773 CGCTTTAGCTCCGGTGCATA 60.530 55.000 28.68 15.51 39.32 3.14
2657 3085 1.873903 CGCTTTAGCTCCGGTGCATAT 60.874 52.381 28.68 12.20 39.32 1.78
2658 3086 1.801178 GCTTTAGCTCCGGTGCATATC 59.199 52.381 28.68 10.88 38.21 1.63
2659 3087 2.548920 GCTTTAGCTCCGGTGCATATCT 60.549 50.000 28.68 11.47 38.21 1.98
2660 3088 3.321497 CTTTAGCTCCGGTGCATATCTC 58.679 50.000 28.68 0.00 34.99 2.75
2661 3089 2.294449 TAGCTCCGGTGCATATCTCT 57.706 50.000 28.68 10.04 34.99 3.10
2662 3090 2.294449 AGCTCCGGTGCATATCTCTA 57.706 50.000 28.68 0.00 34.99 2.43
2663 3091 2.166829 AGCTCCGGTGCATATCTCTAG 58.833 52.381 28.68 2.56 34.99 2.43
2664 3092 1.403514 GCTCCGGTGCATATCTCTAGC 60.404 57.143 23.09 5.60 0.00 3.42
2665 3093 2.166829 CTCCGGTGCATATCTCTAGCT 58.833 52.381 0.00 0.00 0.00 3.32
2666 3094 2.163412 CTCCGGTGCATATCTCTAGCTC 59.837 54.545 0.00 0.00 0.00 4.09
2667 3095 1.135546 CCGGTGCATATCTCTAGCTCG 60.136 57.143 0.00 0.00 0.00 5.03
2668 3096 1.537638 CGGTGCATATCTCTAGCTCGT 59.462 52.381 0.00 0.00 0.00 4.18
2669 3097 2.413502 CGGTGCATATCTCTAGCTCGTC 60.414 54.545 0.00 0.00 0.00 4.20
2670 3098 2.554462 GGTGCATATCTCTAGCTCGTCA 59.446 50.000 0.00 0.00 0.00 4.35
2671 3099 3.365868 GGTGCATATCTCTAGCTCGTCAG 60.366 52.174 0.00 0.00 0.00 3.51
2672 3100 3.500299 GTGCATATCTCTAGCTCGTCAGA 59.500 47.826 0.00 0.00 0.00 3.27
2674 3102 3.751175 GCATATCTCTAGCTCGTCAGAGT 59.249 47.826 10.35 2.60 46.03 3.24
2675 3103 4.142902 GCATATCTCTAGCTCGTCAGAGTC 60.143 50.000 10.35 0.00 46.03 3.36
2676 3104 3.838244 ATCTCTAGCTCGTCAGAGTCT 57.162 47.619 10.35 0.00 46.03 3.24
2677 3105 3.620427 TCTCTAGCTCGTCAGAGTCTT 57.380 47.619 10.35 0.00 46.03 3.01
2678 3106 4.739587 TCTCTAGCTCGTCAGAGTCTTA 57.260 45.455 10.35 0.00 46.03 2.10
2679 3107 4.689071 TCTCTAGCTCGTCAGAGTCTTAG 58.311 47.826 10.35 0.00 46.03 2.18
2680 3108 3.199677 TCTAGCTCGTCAGAGTCTTAGC 58.800 50.000 0.00 0.00 46.03 3.09
2681 3109 1.827681 AGCTCGTCAGAGTCTTAGCA 58.172 50.000 13.25 0.00 46.03 3.49
2682 3110 2.163509 AGCTCGTCAGAGTCTTAGCAA 58.836 47.619 13.25 0.00 46.03 3.91
2683 3111 2.757868 AGCTCGTCAGAGTCTTAGCAAT 59.242 45.455 13.25 0.00 46.03 3.56
2684 3112 2.857152 GCTCGTCAGAGTCTTAGCAATG 59.143 50.000 8.11 0.00 46.03 2.82
2685 3113 3.674682 GCTCGTCAGAGTCTTAGCAATGT 60.675 47.826 8.11 0.00 46.03 2.71
2686 3114 3.838120 TCGTCAGAGTCTTAGCAATGTG 58.162 45.455 0.00 0.00 0.00 3.21
2687 3115 3.506067 TCGTCAGAGTCTTAGCAATGTGA 59.494 43.478 0.00 0.00 0.00 3.58
2688 3116 3.856521 CGTCAGAGTCTTAGCAATGTGAG 59.143 47.826 0.00 0.00 0.00 3.51
2689 3117 4.617067 CGTCAGAGTCTTAGCAATGTGAGT 60.617 45.833 0.00 0.00 0.00 3.41
2690 3118 5.392057 CGTCAGAGTCTTAGCAATGTGAGTA 60.392 44.000 0.00 0.00 0.00 2.59
2691 3119 6.568869 GTCAGAGTCTTAGCAATGTGAGTAT 58.431 40.000 0.00 0.00 0.00 2.12
2692 3120 6.475076 GTCAGAGTCTTAGCAATGTGAGTATG 59.525 42.308 0.00 0.00 0.00 2.39
2693 3121 6.378280 TCAGAGTCTTAGCAATGTGAGTATGA 59.622 38.462 0.00 0.00 30.69 2.15
2694 3122 7.038048 CAGAGTCTTAGCAATGTGAGTATGAA 58.962 38.462 0.00 0.00 0.00 2.57
2695 3123 7.710044 CAGAGTCTTAGCAATGTGAGTATGAAT 59.290 37.037 0.00 0.00 0.00 2.57
2696 3124 8.263640 AGAGTCTTAGCAATGTGAGTATGAATT 58.736 33.333 0.00 0.00 0.00 2.17
2697 3125 9.534565 GAGTCTTAGCAATGTGAGTATGAATTA 57.465 33.333 0.00 0.00 0.00 1.40
2725 3153 7.732222 ATCCCAAAAGCTATTCCATTGTAAA 57.268 32.000 0.00 0.00 0.00 2.01
2726 3154 7.546250 TCCCAAAAGCTATTCCATTGTAAAA 57.454 32.000 0.00 0.00 0.00 1.52
2727 3155 8.144862 TCCCAAAAGCTATTCCATTGTAAAAT 57.855 30.769 0.00 0.00 0.00 1.82
2728 3156 9.261035 TCCCAAAAGCTATTCCATTGTAAAATA 57.739 29.630 0.00 0.00 0.00 1.40
2729 3157 9.533253 CCCAAAAGCTATTCCATTGTAAAATAG 57.467 33.333 0.00 0.00 36.50 1.73
2800 3228 9.598517 AACTTGTGTAATGTTCATCAAATTGTT 57.401 25.926 0.00 0.00 0.00 2.83
2801 3229 9.598517 ACTTGTGTAATGTTCATCAAATTGTTT 57.401 25.926 0.00 0.00 0.00 2.83
2810 3238 9.643693 ATGTTCATCAAATTGTTTATCTTGGAC 57.356 29.630 0.00 0.00 0.00 4.02
2811 3239 8.637099 TGTTCATCAAATTGTTTATCTTGGACA 58.363 29.630 0.00 0.00 0.00 4.02
2812 3240 9.643693 GTTCATCAAATTGTTTATCTTGGACAT 57.356 29.630 0.00 0.00 0.00 3.06
2813 3241 9.642327 TTCATCAAATTGTTTATCTTGGACATG 57.358 29.630 0.00 0.00 0.00 3.21
2814 3242 8.805175 TCATCAAATTGTTTATCTTGGACATGT 58.195 29.630 0.00 0.00 0.00 3.21
2815 3243 8.865978 CATCAAATTGTTTATCTTGGACATGTG 58.134 33.333 1.15 0.00 0.00 3.21
2816 3244 7.950512 TCAAATTGTTTATCTTGGACATGTGT 58.049 30.769 1.15 0.00 0.00 3.72
2817 3245 7.866898 TCAAATTGTTTATCTTGGACATGTGTG 59.133 33.333 1.15 0.00 0.00 3.82
2818 3246 7.523293 AATTGTTTATCTTGGACATGTGTGA 57.477 32.000 1.15 0.00 0.00 3.58
2819 3247 5.940192 TGTTTATCTTGGACATGTGTGAC 57.060 39.130 1.15 0.00 0.00 3.67
2820 3248 4.759693 TGTTTATCTTGGACATGTGTGACC 59.240 41.667 1.15 0.00 40.08 4.02
2821 3249 4.908601 TTATCTTGGACATGTGTGACCT 57.091 40.909 1.15 0.00 40.28 3.85
2822 3250 6.170506 GTTTATCTTGGACATGTGTGACCTA 58.829 40.000 1.15 0.00 40.28 3.08
2823 3251 4.908601 ATCTTGGACATGTGTGACCTAA 57.091 40.909 1.15 0.00 40.28 2.69
2824 3252 4.908601 TCTTGGACATGTGTGACCTAAT 57.091 40.909 1.15 0.00 40.28 1.73
2825 3253 6.560003 ATCTTGGACATGTGTGACCTAATA 57.440 37.500 1.15 0.00 40.28 0.98
2826 3254 6.367374 TCTTGGACATGTGTGACCTAATAA 57.633 37.500 1.15 0.00 40.28 1.40
2827 3255 6.774673 TCTTGGACATGTGTGACCTAATAAA 58.225 36.000 1.15 0.00 40.28 1.40
2828 3256 6.653320 TCTTGGACATGTGTGACCTAATAAAC 59.347 38.462 1.15 0.00 40.28 2.01
2829 3257 5.250200 TGGACATGTGTGACCTAATAAACC 58.750 41.667 1.15 0.00 40.28 3.27
2830 3258 4.331717 GGACATGTGTGACCTAATAAACCG 59.668 45.833 1.15 0.00 37.23 4.44
2831 3259 5.155278 ACATGTGTGACCTAATAAACCGA 57.845 39.130 0.00 0.00 0.00 4.69
2832 3260 5.553123 ACATGTGTGACCTAATAAACCGAA 58.447 37.500 0.00 0.00 0.00 4.30
2833 3261 5.998981 ACATGTGTGACCTAATAAACCGAAA 59.001 36.000 0.00 0.00 0.00 3.46
2834 3262 6.487331 ACATGTGTGACCTAATAAACCGAAAA 59.513 34.615 0.00 0.00 0.00 2.29
2835 3263 6.939132 TGTGTGACCTAATAAACCGAAAAA 57.061 33.333 0.00 0.00 0.00 1.94
2836 3264 6.961576 TGTGTGACCTAATAAACCGAAAAAG 58.038 36.000 0.00 0.00 0.00 2.27
2837 3265 6.766944 TGTGTGACCTAATAAACCGAAAAAGA 59.233 34.615 0.00 0.00 0.00 2.52
2838 3266 7.041644 TGTGTGACCTAATAAACCGAAAAAGAG 60.042 37.037 0.00 0.00 0.00 2.85
2839 3267 6.428771 TGTGACCTAATAAACCGAAAAAGAGG 59.571 38.462 0.00 0.00 0.00 3.69
2840 3268 6.652062 GTGACCTAATAAACCGAAAAAGAGGA 59.348 38.462 0.00 0.00 0.00 3.71
2841 3269 7.173735 GTGACCTAATAAACCGAAAAAGAGGAA 59.826 37.037 0.00 0.00 0.00 3.36
2842 3270 7.389607 TGACCTAATAAACCGAAAAAGAGGAAG 59.610 37.037 0.00 0.00 0.00 3.46
2843 3271 7.455891 ACCTAATAAACCGAAAAAGAGGAAGA 58.544 34.615 0.00 0.00 0.00 2.87
2844 3272 7.606839 ACCTAATAAACCGAAAAAGAGGAAGAG 59.393 37.037 0.00 0.00 0.00 2.85
2845 3273 7.606839 CCTAATAAACCGAAAAAGAGGAAGAGT 59.393 37.037 0.00 0.00 0.00 3.24
2846 3274 9.649167 CTAATAAACCGAAAAAGAGGAAGAGTA 57.351 33.333 0.00 0.00 0.00 2.59
2848 3276 6.803154 AAACCGAAAAAGAGGAAGAGTATG 57.197 37.500 0.00 0.00 0.00 2.39
2849 3277 5.740290 ACCGAAAAAGAGGAAGAGTATGA 57.260 39.130 0.00 0.00 0.00 2.15
2850 3278 6.301169 ACCGAAAAAGAGGAAGAGTATGAT 57.699 37.500 0.00 0.00 0.00 2.45
2851 3279 6.109359 ACCGAAAAAGAGGAAGAGTATGATG 58.891 40.000 0.00 0.00 0.00 3.07
2852 3280 5.007136 CCGAAAAAGAGGAAGAGTATGATGC 59.993 44.000 0.00 0.00 0.00 3.91
2853 3281 5.814705 CGAAAAAGAGGAAGAGTATGATGCT 59.185 40.000 0.00 0.00 0.00 3.79
2854 3282 6.314896 CGAAAAAGAGGAAGAGTATGATGCTT 59.685 38.462 0.00 0.00 0.00 3.91
2855 3283 7.148340 CGAAAAAGAGGAAGAGTATGATGCTTT 60.148 37.037 0.00 0.00 0.00 3.51
2856 3284 9.167311 GAAAAAGAGGAAGAGTATGATGCTTTA 57.833 33.333 0.00 0.00 0.00 1.85
2857 3285 9.520515 AAAAAGAGGAAGAGTATGATGCTTTAA 57.479 29.630 0.00 0.00 0.00 1.52
2858 3286 9.692325 AAAAGAGGAAGAGTATGATGCTTTAAT 57.308 29.630 0.00 0.00 0.00 1.40
2859 3287 8.900983 AAGAGGAAGAGTATGATGCTTTAATC 57.099 34.615 0.00 0.00 0.00 1.75
2860 3288 8.027524 AGAGGAAGAGTATGATGCTTTAATCA 57.972 34.615 0.00 0.00 40.73 2.57
2861 3289 8.658619 AGAGGAAGAGTATGATGCTTTAATCAT 58.341 33.333 5.14 5.14 46.55 2.45
2862 3290 8.618702 AGGAAGAGTATGATGCTTTAATCATG 57.381 34.615 9.40 0.00 44.96 3.07
2863 3291 8.435187 AGGAAGAGTATGATGCTTTAATCATGA 58.565 33.333 0.00 0.00 44.96 3.07
2864 3292 8.719648 GGAAGAGTATGATGCTTTAATCATGAG 58.280 37.037 0.09 0.00 44.96 2.90
2865 3293 7.670009 AGAGTATGATGCTTTAATCATGAGC 57.330 36.000 0.09 0.00 44.96 4.26
2866 3294 6.368243 AGAGTATGATGCTTTAATCATGAGCG 59.632 38.462 0.09 0.00 44.96 5.03
2904 3338 1.500108 GATCTCAAGAGCAGCGGATG 58.500 55.000 0.00 0.00 0.00 3.51
2923 3357 3.648982 CTTTGTGCGCTGTCGGCA 61.649 61.111 9.73 0.00 41.91 5.69
3037 3480 0.756294 TTGAGGGAGTCGTTGCTGAA 59.244 50.000 0.00 0.00 0.00 3.02
3039 3482 1.347707 TGAGGGAGTCGTTGCTGAAAT 59.652 47.619 0.00 0.00 0.00 2.17
3047 3490 1.779061 GTTGCTGAAATCGTCGCGA 59.221 52.632 3.71 3.71 41.13 5.87
3069 3512 0.228994 GCGGCGCGTCTAAATAAGTC 59.771 55.000 19.09 0.00 0.00 3.01
3085 3528 2.640316 AGTCTCTTCGGGCTTTGTTT 57.360 45.000 0.00 0.00 0.00 2.83
3087 3530 1.947456 GTCTCTTCGGGCTTTGTTTGT 59.053 47.619 0.00 0.00 0.00 2.83
3093 3536 0.673437 CGGGCTTTGTTTGTGGTCAT 59.327 50.000 0.00 0.00 0.00 3.06
3105 3548 1.117150 GTGGTCATACGGGGCTCTAA 58.883 55.000 0.00 0.00 0.00 2.10
3175 3620 0.179062 CTCAGGCTATGGTGTCTGGC 60.179 60.000 0.00 0.00 0.00 4.85
3193 3638 3.986006 GGTCGACCGACACTGGCA 61.986 66.667 20.85 0.00 46.20 4.92
3194 3639 2.261671 GTCGACCGACACTGGCAT 59.738 61.111 16.57 0.00 44.02 4.40
3202 3647 0.667993 CGACACTGGCATGTTTGGTT 59.332 50.000 0.00 0.00 31.24 3.67
3214 3659 4.588899 CATGTTTGGTTCTCAGATGGGTA 58.411 43.478 0.00 0.00 0.00 3.69
3235 3682 2.174639 AGGTGGTTGTGTGGAGATGAAA 59.825 45.455 0.00 0.00 0.00 2.69
3281 3731 8.675705 TGATTTTCTACTGTGTTTCTTCATCA 57.324 30.769 0.00 0.00 0.00 3.07
3357 3807 2.202703 GGTGTCGGAACCGGATCG 60.203 66.667 9.46 9.12 40.25 3.69
3373 3823 4.291783 CGGATCGTAGTTCTCTTTCATCC 58.708 47.826 0.00 0.00 0.00 3.51
3397 3847 0.682852 GGGGCACATATAGCGGTACA 59.317 55.000 0.00 0.00 0.00 2.90
3485 3935 2.657237 CGGAGCGAAGAAGTGGGT 59.343 61.111 0.00 0.00 0.00 4.51
3559 4016 5.414454 GGTCTGGATGCAAATTACTGTGTTA 59.586 40.000 0.00 0.00 0.00 2.41
3560 4017 6.095440 GGTCTGGATGCAAATTACTGTGTTAT 59.905 38.462 0.00 0.00 0.00 1.89
3573 4038 4.949121 ACTGTGTTATAGGGGTCTTCTCT 58.051 43.478 0.00 0.00 0.00 3.10
3583 4048 4.171234 AGGGGTCTTCTCTCAAGATTCAA 58.829 43.478 0.00 0.00 0.00 2.69
3584 4049 4.599241 AGGGGTCTTCTCTCAAGATTCAAA 59.401 41.667 0.00 0.00 0.00 2.69
3586 4051 5.948758 GGGGTCTTCTCTCAAGATTCAAAAT 59.051 40.000 0.00 0.00 0.00 1.82
3597 4062 8.631797 TCTCAAGATTCAAAATTGATGACACAA 58.368 29.630 0.00 0.00 37.00 3.33
3615 4080 2.158813 ACAAAGCTTCGGAGGTCTTCAA 60.159 45.455 0.00 0.00 32.03 2.69
3616 4081 2.464157 AAGCTTCGGAGGTCTTCAAG 57.536 50.000 0.00 0.00 32.03 3.02
3617 4082 1.633774 AGCTTCGGAGGTCTTCAAGA 58.366 50.000 0.00 0.00 0.00 3.02
3618 4083 1.548269 AGCTTCGGAGGTCTTCAAGAG 59.452 52.381 0.00 0.00 0.00 2.85
3619 4084 2.003196 CTTCGGAGGTCTTCAAGAGC 57.997 55.000 8.67 8.67 42.72 4.09
3628 4093 3.339141 GGTCTTCAAGAGCTTTGTAGGG 58.661 50.000 9.47 3.26 39.50 3.53
3629 4094 2.744741 GTCTTCAAGAGCTTTGTAGGGC 59.255 50.000 12.05 0.00 0.00 5.19
3630 4095 2.639839 TCTTCAAGAGCTTTGTAGGGCT 59.360 45.455 12.05 0.00 41.88 5.19
3631 4096 3.073062 TCTTCAAGAGCTTTGTAGGGCTT 59.927 43.478 12.05 0.00 39.05 4.35
3632 4097 3.059352 TCAAGAGCTTTGTAGGGCTTC 57.941 47.619 0.00 0.00 39.05 3.86
3633 4098 2.371841 TCAAGAGCTTTGTAGGGCTTCA 59.628 45.455 0.00 0.00 39.05 3.02
3643 4108 3.230134 TGTAGGGCTTCATGTTTTGCTT 58.770 40.909 0.00 0.00 0.00 3.91
3644 4109 4.402829 TGTAGGGCTTCATGTTTTGCTTA 58.597 39.130 0.00 0.00 0.00 3.09
3658 4123 6.879400 TGTTTTGCTTATTGTTTTAGGGTGT 58.121 32.000 0.00 0.00 0.00 4.16
3691 4156 5.910637 TCTGGTTGTTTATACGTGTGTTC 57.089 39.130 0.00 0.00 0.00 3.18
3693 4158 4.118410 TGGTTGTTTATACGTGTGTTCGT 58.882 39.130 0.00 0.00 45.97 3.85
3694 4159 4.569966 TGGTTGTTTATACGTGTGTTCGTT 59.430 37.500 0.00 0.00 43.80 3.85
3695 4160 5.132576 GGTTGTTTATACGTGTGTTCGTTC 58.867 41.667 0.00 0.00 43.80 3.95
3709 4183 2.443887 TCGTTCGGGGTTAAGAACTG 57.556 50.000 6.74 1.77 43.15 3.16
3711 4185 2.890311 TCGTTCGGGGTTAAGAACTGTA 59.110 45.455 6.74 0.00 43.15 2.74
3716 4190 6.019318 CGTTCGGGGTTAAGAACTGTATATTG 60.019 42.308 6.74 0.00 43.15 1.90
3721 4195 6.257193 GGGGTTAAGAACTGTATATTGTGTCG 59.743 42.308 0.00 0.00 0.00 4.35
3732 4206 8.390354 ACTGTATATTGTGTCGTGATTTGAATG 58.610 33.333 0.00 0.00 0.00 2.67
3733 4207 8.262715 TGTATATTGTGTCGTGATTTGAATGT 57.737 30.769 0.00 0.00 0.00 2.71
3741 4215 7.065683 TGTGTCGTGATTTGAATGTAAGCATAT 59.934 33.333 0.00 0.00 34.39 1.78
3742 4216 8.547894 GTGTCGTGATTTGAATGTAAGCATATA 58.452 33.333 0.00 0.00 34.39 0.86
3743 4217 8.764287 TGTCGTGATTTGAATGTAAGCATATAG 58.236 33.333 0.00 0.00 34.39 1.31
3744 4218 8.765219 GTCGTGATTTGAATGTAAGCATATAGT 58.235 33.333 0.00 0.00 34.39 2.12
3745 4219 9.325198 TCGTGATTTGAATGTAAGCATATAGTT 57.675 29.630 0.00 0.00 34.39 2.24
3746 4220 9.935682 CGTGATTTGAATGTAAGCATATAGTTT 57.064 29.630 0.00 0.00 34.39 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.006217 GTGTCAAACCTCTAGTACGGGTT 59.994 47.826 8.87 8.87 44.11 4.11
2 3 2.094338 GGTGTCAAACCTCTAGTACGGG 60.094 54.545 0.00 0.00 46.55 5.28
14 15 0.464916 AGTCCCGGTTGGTGTCAAAC 60.465 55.000 0.00 0.00 37.23 2.93
15 16 1.071071 CTAGTCCCGGTTGGTGTCAAA 59.929 52.381 0.00 0.00 34.28 2.69
16 17 0.682852 CTAGTCCCGGTTGGTGTCAA 59.317 55.000 0.00 0.00 34.77 3.18
17 18 0.470456 ACTAGTCCCGGTTGGTGTCA 60.470 55.000 0.00 0.00 34.77 3.58
18 19 0.037605 CACTAGTCCCGGTTGGTGTC 60.038 60.000 0.00 0.00 34.77 3.67
19 20 0.470456 TCACTAGTCCCGGTTGGTGT 60.470 55.000 0.00 0.00 34.77 4.16
20 21 0.246635 CTCACTAGTCCCGGTTGGTG 59.753 60.000 0.00 4.35 34.77 4.17
21 22 1.542187 GCTCACTAGTCCCGGTTGGT 61.542 60.000 0.00 0.00 34.77 3.67
22 23 1.218316 GCTCACTAGTCCCGGTTGG 59.782 63.158 0.00 0.00 0.00 3.77
23 24 1.153823 CGCTCACTAGTCCCGGTTG 60.154 63.158 0.00 0.00 0.00 3.77
24 25 3.003113 GCGCTCACTAGTCCCGGTT 62.003 63.158 0.00 0.00 0.00 4.44
25 26 3.450115 GCGCTCACTAGTCCCGGT 61.450 66.667 0.00 0.00 0.00 5.28
26 27 4.208686 GGCGCTCACTAGTCCCGG 62.209 72.222 7.64 0.00 0.00 5.73
27 28 4.554363 CGGCGCTCACTAGTCCCG 62.554 72.222 7.64 0.00 34.05 5.14
28 29 4.874977 GCGGCGCTCACTAGTCCC 62.875 72.222 26.86 0.00 0.00 4.46
29 30 4.874977 GGCGGCGCTCACTAGTCC 62.875 72.222 32.30 7.60 0.00 3.85
30 31 4.874977 GGGCGGCGCTCACTAGTC 62.875 72.222 32.30 12.04 0.00 2.59
41 42 4.547367 AACATCTAGGCGGGCGGC 62.547 66.667 8.74 8.74 42.51 6.53
42 43 2.588877 CAACATCTAGGCGGGCGG 60.589 66.667 0.00 0.00 0.00 6.13
43 44 2.587322 TTCCAACATCTAGGCGGGCG 62.587 60.000 0.00 0.00 0.00 6.13
44 45 1.095807 GTTCCAACATCTAGGCGGGC 61.096 60.000 0.00 0.00 0.00 6.13
45 46 0.463833 GGTTCCAACATCTAGGCGGG 60.464 60.000 0.00 0.00 0.00 6.13
46 47 0.810031 CGGTTCCAACATCTAGGCGG 60.810 60.000 0.00 0.00 0.00 6.13
47 48 0.810031 CCGGTTCCAACATCTAGGCG 60.810 60.000 0.00 0.00 0.00 5.52
48 49 1.095807 GCCGGTTCCAACATCTAGGC 61.096 60.000 1.90 0.00 36.32 3.93
49 50 0.251916 TGCCGGTTCCAACATCTAGG 59.748 55.000 1.90 0.00 0.00 3.02
50 51 1.066143 AGTGCCGGTTCCAACATCTAG 60.066 52.381 1.90 0.00 0.00 2.43
51 52 0.981183 AGTGCCGGTTCCAACATCTA 59.019 50.000 1.90 0.00 0.00 1.98
52 53 0.981183 TAGTGCCGGTTCCAACATCT 59.019 50.000 1.90 0.00 0.00 2.90
53 54 1.816074 TTAGTGCCGGTTCCAACATC 58.184 50.000 1.90 0.00 0.00 3.06
54 55 2.091541 CATTAGTGCCGGTTCCAACAT 58.908 47.619 1.90 0.00 0.00 2.71
55 56 1.072489 TCATTAGTGCCGGTTCCAACA 59.928 47.619 1.90 0.00 0.00 3.33
56 57 1.816074 TCATTAGTGCCGGTTCCAAC 58.184 50.000 1.90 0.00 0.00 3.77
57 58 2.026729 TGATCATTAGTGCCGGTTCCAA 60.027 45.455 1.90 0.00 0.00 3.53
58 59 1.557371 TGATCATTAGTGCCGGTTCCA 59.443 47.619 1.90 0.00 0.00 3.53
59 60 2.325583 TGATCATTAGTGCCGGTTCC 57.674 50.000 1.90 0.00 0.00 3.62
60 61 6.874134 ACTAATATGATCATTAGTGCCGGTTC 59.126 38.462 14.65 0.00 45.60 3.62
61 62 6.769512 ACTAATATGATCATTAGTGCCGGTT 58.230 36.000 14.65 0.00 45.60 4.44
62 63 6.360370 ACTAATATGATCATTAGTGCCGGT 57.640 37.500 14.65 0.52 45.60 5.28
63 64 7.757097 GTACTAATATGATCATTAGTGCCGG 57.243 40.000 23.23 0.00 46.35 6.13
66 67 7.321153 ACCGGTACTAATATGATCATTAGTGC 58.679 38.462 23.23 21.80 46.35 4.40
67 68 9.706691 AAACCGGTACTAATATGATCATTAGTG 57.293 33.333 23.23 13.56 46.35 2.74
91 92 9.059260 GCTCATTAGTCCCGGTTTATAAATAAA 57.941 33.333 0.00 0.00 0.00 1.40
92 93 8.434392 AGCTCATTAGTCCCGGTTTATAAATAA 58.566 33.333 0.00 0.00 0.00 1.40
93 94 7.876068 CAGCTCATTAGTCCCGGTTTATAAATA 59.124 37.037 0.00 0.00 0.00 1.40
94 95 6.710744 CAGCTCATTAGTCCCGGTTTATAAAT 59.289 38.462 0.00 0.00 0.00 1.40
95 96 6.053005 CAGCTCATTAGTCCCGGTTTATAAA 58.947 40.000 0.00 0.00 0.00 1.40
96 97 5.364446 TCAGCTCATTAGTCCCGGTTTATAA 59.636 40.000 0.00 0.00 0.00 0.98
97 98 4.897076 TCAGCTCATTAGTCCCGGTTTATA 59.103 41.667 0.00 0.00 0.00 0.98
98 99 3.709653 TCAGCTCATTAGTCCCGGTTTAT 59.290 43.478 0.00 0.00 0.00 1.40
99 100 3.101437 TCAGCTCATTAGTCCCGGTTTA 58.899 45.455 0.00 0.00 0.00 2.01
100 101 1.906574 TCAGCTCATTAGTCCCGGTTT 59.093 47.619 0.00 0.00 0.00 3.27
101 102 1.568504 TCAGCTCATTAGTCCCGGTT 58.431 50.000 0.00 0.00 0.00 4.44
102 103 1.207329 GTTCAGCTCATTAGTCCCGGT 59.793 52.381 0.00 0.00 0.00 5.28
103 104 1.207089 TGTTCAGCTCATTAGTCCCGG 59.793 52.381 0.00 0.00 0.00 5.73
104 105 2.672961 TGTTCAGCTCATTAGTCCCG 57.327 50.000 0.00 0.00 0.00 5.14
105 106 4.125703 CTGATGTTCAGCTCATTAGTCCC 58.874 47.826 0.00 0.00 37.72 4.46
106 107 4.125703 CCTGATGTTCAGCTCATTAGTCC 58.874 47.826 5.35 0.00 42.98 3.85
107 108 4.764172 ACCTGATGTTCAGCTCATTAGTC 58.236 43.478 5.35 0.00 42.98 2.59
108 109 4.469227 AGACCTGATGTTCAGCTCATTAGT 59.531 41.667 5.35 0.00 42.98 2.24
109 110 5.021033 AGACCTGATGTTCAGCTCATTAG 57.979 43.478 0.00 0.00 42.98 1.73
110 111 5.426689 AAGACCTGATGTTCAGCTCATTA 57.573 39.130 0.00 0.00 42.98 1.90
111 112 3.996921 AGACCTGATGTTCAGCTCATT 57.003 42.857 0.00 0.00 42.98 2.57
112 113 3.996921 AAGACCTGATGTTCAGCTCAT 57.003 42.857 0.00 0.00 42.98 2.90
113 114 3.777106 AAAGACCTGATGTTCAGCTCA 57.223 42.857 0.00 0.00 42.98 4.26
132 133 3.867216 GCTTCGCCCCACTAGTAGAAAAA 60.867 47.826 3.59 0.00 0.00 1.94
133 134 2.354403 GCTTCGCCCCACTAGTAGAAAA 60.354 50.000 3.59 0.00 0.00 2.29
134 135 1.206371 GCTTCGCCCCACTAGTAGAAA 59.794 52.381 3.59 0.00 0.00 2.52
135 136 0.822164 GCTTCGCCCCACTAGTAGAA 59.178 55.000 3.59 0.00 0.00 2.10
136 137 1.381928 CGCTTCGCCCCACTAGTAGA 61.382 60.000 3.59 0.00 0.00 2.59
137 138 1.065928 CGCTTCGCCCCACTAGTAG 59.934 63.158 0.00 0.00 0.00 2.57
138 139 1.378911 TCGCTTCGCCCCACTAGTA 60.379 57.895 0.00 0.00 0.00 1.82
139 140 2.678934 TCGCTTCGCCCCACTAGT 60.679 61.111 0.00 0.00 0.00 2.57
140 141 1.945354 TTCTCGCTTCGCCCCACTAG 61.945 60.000 0.00 0.00 0.00 2.57
141 142 1.945354 CTTCTCGCTTCGCCCCACTA 61.945 60.000 0.00 0.00 0.00 2.74
142 143 3.302347 CTTCTCGCTTCGCCCCACT 62.302 63.158 0.00 0.00 0.00 4.00
143 144 2.815647 CTTCTCGCTTCGCCCCAC 60.816 66.667 0.00 0.00 0.00 4.61
144 145 4.082523 CCTTCTCGCTTCGCCCCA 62.083 66.667 0.00 0.00 0.00 4.96
145 146 4.083862 ACCTTCTCGCTTCGCCCC 62.084 66.667 0.00 0.00 0.00 5.80
168 169 0.761187 ACTTCTCTGTCAGCTTGGCA 59.239 50.000 0.00 0.00 0.00 4.92
185 186 3.936372 TCGTCAAAATCTCCTCGAACT 57.064 42.857 0.00 0.00 0.00 3.01
198 199 4.665833 TGTCTCTTCCTTCTTCGTCAAA 57.334 40.909 0.00 0.00 0.00 2.69
202 203 2.672478 CGCATGTCTCTTCCTTCTTCGT 60.672 50.000 0.00 0.00 0.00 3.85
236 237 1.140652 CCTTCCTCTCCTCCTTGATGC 59.859 57.143 0.00 0.00 0.00 3.91
267 268 2.079925 GTCACCTCCATCAACTGCTTC 58.920 52.381 0.00 0.00 0.00 3.86
296 297 2.028130 TCCTCTCTTCGAGCTTGATCC 58.972 52.381 3.98 0.00 38.49 3.36
328 329 1.003233 GTGCCGCCTTCCTCTCTTT 60.003 57.895 0.00 0.00 0.00 2.52
360 380 6.321435 TCTTCATCCTCATTTCTTCTAGCGTA 59.679 38.462 0.00 0.00 0.00 4.42
366 386 5.593502 GGCAATCTTCATCCTCATTTCTTCT 59.406 40.000 0.00 0.00 0.00 2.85
374 394 0.543277 AGCGGCAATCTTCATCCTCA 59.457 50.000 1.45 0.00 0.00 3.86
396 420 4.003788 ACCTTGGTGTCCTCCGCG 62.004 66.667 0.00 0.00 0.00 6.46
412 436 5.411781 AGAGTCGATATTCAAGGTCAACAC 58.588 41.667 0.00 0.00 0.00 3.32
480 505 0.883833 CTTTCTGCCGCTCCAACATT 59.116 50.000 0.00 0.00 0.00 2.71
506 531 1.382522 CCCATCTTCCACCGATGTTG 58.617 55.000 0.00 0.00 37.22 3.33
507 532 0.255890 CCCCATCTTCCACCGATGTT 59.744 55.000 0.00 0.00 37.22 2.71
508 533 0.620410 TCCCCATCTTCCACCGATGT 60.620 55.000 0.00 0.00 37.22 3.06
511 536 2.355986 CGTCCCCATCTTCCACCGA 61.356 63.158 0.00 0.00 0.00 4.69
524 549 4.394712 CCACCTCTGCCACGTCCC 62.395 72.222 0.00 0.00 0.00 4.46
556 593 1.229082 TCGCCACCACCTAGGAAGT 60.229 57.895 17.98 9.32 41.22 3.01
559 596 1.534476 TTGTCGCCACCACCTAGGA 60.534 57.895 17.98 0.00 41.22 2.94
576 613 1.153369 CCGCGATCATGGAGGTGTT 60.153 57.895 8.23 0.00 0.00 3.32
612 654 0.896479 TTCTGTCATGTCGGACCGGA 60.896 55.000 15.25 0.00 36.97 5.14
621 663 2.183478 TCCGTGCATTTCTGTCATGT 57.817 45.000 0.00 0.00 0.00 3.21
641 684 6.123651 ACCCAAAATAATATCAGTACGGCAA 58.876 36.000 0.00 0.00 0.00 4.52
667 710 8.632551 GCAAATATGTTTAGTTTTTACACGTCC 58.367 33.333 0.00 0.00 0.00 4.79
731 778 7.624360 AATTCAAATCTACGCTAATCCACAA 57.376 32.000 0.00 0.00 0.00 3.33
739 804 8.243426 AGCAAATTCAAATTCAAATCTACGCTA 58.757 29.630 0.00 0.00 0.00 4.26
778 843 1.973138 CGACATTCAACCGTAGTCGT 58.027 50.000 0.00 0.00 44.87 4.34
798 863 3.771160 GACACGGATGCGGGAGGT 61.771 66.667 18.37 5.46 0.00 3.85
820 885 3.378512 TCCATATGCAGACTGGTCTCTT 58.621 45.455 4.26 0.00 37.98 2.85
822 887 3.661944 CATCCATATGCAGACTGGTCTC 58.338 50.000 4.26 0.00 37.98 3.36
823 888 3.766068 CATCCATATGCAGACTGGTCT 57.234 47.619 4.26 0.00 41.37 3.85
836 908 3.593442 AAATTTCCTCCCGCATCCATA 57.407 42.857 0.00 0.00 0.00 2.74
1032 1189 2.100991 CGACTGCCGTACGTACCC 59.899 66.667 19.67 11.48 0.00 3.69
1058 1215 3.658709 CATGCCTCCTAGCTTAGCTAAC 58.341 50.000 15.23 0.10 40.82 2.34
1059 1216 2.037772 GCATGCCTCCTAGCTTAGCTAA 59.962 50.000 15.23 5.94 40.82 3.09
1060 1217 1.620819 GCATGCCTCCTAGCTTAGCTA 59.379 52.381 13.70 13.70 40.44 3.32
1061 1218 0.396060 GCATGCCTCCTAGCTTAGCT 59.604 55.000 12.67 12.67 43.41 3.32
1062 1219 0.948141 CGCATGCCTCCTAGCTTAGC 60.948 60.000 13.15 0.00 0.00 3.09
1063 1220 0.320247 CCGCATGCCTCCTAGCTTAG 60.320 60.000 13.15 0.00 0.00 2.18
1064 1221 1.748403 CCGCATGCCTCCTAGCTTA 59.252 57.895 13.15 0.00 0.00 3.09
1065 1222 2.507944 CCGCATGCCTCCTAGCTT 59.492 61.111 13.15 0.00 0.00 3.74
1096 1259 2.430610 GCCGCTGTCTCCTCCATCT 61.431 63.158 0.00 0.00 0.00 2.90
1134 1318 4.643387 GGCGCCCTCACCAACACT 62.643 66.667 18.11 0.00 0.00 3.55
1156 1340 1.127567 CACCTCCACCTCCAACTCCA 61.128 60.000 0.00 0.00 0.00 3.86
1157 1341 1.679898 CACCTCCACCTCCAACTCC 59.320 63.158 0.00 0.00 0.00 3.85
1158 1342 0.836400 TCCACCTCCACCTCCAACTC 60.836 60.000 0.00 0.00 0.00 3.01
1159 1343 0.838122 CTCCACCTCCACCTCCAACT 60.838 60.000 0.00 0.00 0.00 3.16
1160 1344 1.679898 CTCCACCTCCACCTCCAAC 59.320 63.158 0.00 0.00 0.00 3.77
1161 1345 1.538876 CCTCCACCTCCACCTCCAA 60.539 63.158 0.00 0.00 0.00 3.53
1288 1479 3.896648 ACGTGTGCAATTAACTTGAGG 57.103 42.857 0.00 0.00 36.97 3.86
1340 1532 3.492102 ATGCCCGACATGCTTATAACT 57.508 42.857 0.00 0.00 37.70 2.24
1514 1757 6.484977 ACAGAAAGGTAGCAAAAGAGAGAAAG 59.515 38.462 0.00 0.00 0.00 2.62
1524 1794 4.272504 CAGTTTCGACAGAAAGGTAGCAAA 59.727 41.667 0.00 0.00 45.92 3.68
1526 1796 3.069016 TCAGTTTCGACAGAAAGGTAGCA 59.931 43.478 0.00 0.00 45.92 3.49
1543 1813 0.317479 CGGTCGGAGAAACCTCAGTT 59.683 55.000 0.00 0.00 39.69 3.16
1549 1819 1.891722 TTAGGCCGGTCGGAGAAACC 61.892 60.000 14.15 4.31 39.69 3.27
1561 1831 5.305585 ACATGGATACTGTTAATTAGGCCG 58.694 41.667 0.00 0.00 37.61 6.13
1649 1945 2.354704 CGTACCTCTTTGCCCATGAGAA 60.355 50.000 0.00 0.00 0.00 2.87
1689 2004 0.821711 CGTCCCATGTGGTTGTGGTT 60.822 55.000 0.00 0.00 33.55 3.67
1732 2058 2.290960 ACTCCCCAAGGATAGTGCAAAC 60.291 50.000 0.00 0.00 42.93 2.93
1739 2065 2.683768 ACTGCTACTCCCCAAGGATAG 58.316 52.381 0.00 0.00 42.93 2.08
1855 2223 4.812476 TTCCGCTCGTGCATCCCG 62.812 66.667 10.43 0.00 39.64 5.14
1991 2359 5.189659 ACCAGTTAGTCGATGAATAGCTC 57.810 43.478 0.00 0.00 0.00 4.09
2003 2371 1.834263 AGCATCCAGGACCAGTTAGTC 59.166 52.381 0.00 0.00 35.95 2.59
2019 2387 2.752030 TCAGCAGGGTAACTAGAGCAT 58.248 47.619 0.00 0.00 0.00 3.79
2106 2507 0.460109 CACCGCCTTGTCGATGATGA 60.460 55.000 0.00 0.00 0.00 2.92
2107 2508 1.431488 CCACCGCCTTGTCGATGATG 61.431 60.000 0.00 0.00 0.00 3.07
2108 2509 1.153369 CCACCGCCTTGTCGATGAT 60.153 57.895 0.00 0.00 0.00 2.45
2215 2616 3.881688 GTCATGCATGCAGGAGATTAACT 59.118 43.478 33.35 6.27 37.42 2.24
2221 2622 1.202615 GCTAGTCATGCATGCAGGAGA 60.203 52.381 33.35 22.79 37.42 3.71
2223 2624 0.835276 AGCTAGTCATGCATGCAGGA 59.165 50.000 29.68 29.68 34.19 3.86
2248 2664 4.012895 GCCGTTGCACTCACCACG 62.013 66.667 0.00 0.00 37.47 4.94
2258 2674 4.527157 GCTCGCAGATGCCGTTGC 62.527 66.667 0.00 0.00 37.91 4.17
2259 2675 2.301902 GAAGCTCGCAGATGCCGTTG 62.302 60.000 0.00 0.00 37.91 4.10
2260 2676 2.046892 AAGCTCGCAGATGCCGTT 60.047 55.556 0.00 0.00 37.91 4.44
2261 2677 2.510238 GAAGCTCGCAGATGCCGT 60.510 61.111 0.00 0.00 37.91 5.68
2262 2678 1.760268 GAAGAAGCTCGCAGATGCCG 61.760 60.000 0.00 0.00 37.91 5.69
2263 2679 1.435408 GGAAGAAGCTCGCAGATGCC 61.435 60.000 0.00 0.00 37.91 4.40
2264 2680 1.435408 GGGAAGAAGCTCGCAGATGC 61.435 60.000 0.00 0.00 33.89 3.91
2266 2682 2.290847 TGGGAAGAAGCTCGCAGAT 58.709 52.632 0.00 0.00 33.71 2.90
2268 2684 4.198625 CTGGGAAGAAGCTCGCAG 57.801 61.111 3.81 3.81 46.13 5.18
2272 2688 1.813337 GCTCGCTGGGAAGAAGCTC 60.813 63.158 0.00 0.00 38.57 4.09
2273 2689 0.972983 TAGCTCGCTGGGAAGAAGCT 60.973 55.000 10.27 10.27 38.57 3.74
2274 2690 0.529555 CTAGCTCGCTGGGAAGAAGC 60.530 60.000 0.85 0.00 37.31 3.86
2275 2691 0.529555 GCTAGCTCGCTGGGAAGAAG 60.530 60.000 7.70 0.00 0.00 2.85
2277 2693 0.106669 TAGCTAGCTCGCTGGGAAGA 60.107 55.000 23.26 0.00 41.12 2.87
2278 2694 0.313672 CTAGCTAGCTCGCTGGGAAG 59.686 60.000 23.26 6.49 41.12 3.46
2279 2695 1.739338 GCTAGCTAGCTCGCTGGGAA 61.739 60.000 33.71 6.69 45.62 3.97
2280 2696 2.196925 GCTAGCTAGCTCGCTGGGA 61.197 63.158 33.71 7.41 45.62 4.37
2281 2697 2.338257 GCTAGCTAGCTCGCTGGG 59.662 66.667 33.71 15.00 45.62 4.45
2294 2715 7.488322 ACTAATCAAAGAGTAGAAGCAGCTAG 58.512 38.462 8.30 0.00 34.41 3.42
2302 2723 7.828223 AGGACGACTACTAATCAAAGAGTAGAA 59.172 37.037 14.34 0.00 45.38 2.10
2330 2758 1.066587 GCTGGACACGCTAGCTAGG 59.933 63.158 22.10 14.10 46.55 3.02
2345 2773 3.904136 ATCGTGGAAACTTTTCAGCTG 57.096 42.857 7.63 7.63 38.92 4.24
2389 2817 5.372343 AGGGGCAAATTTGAGAAGTTTTT 57.628 34.783 22.31 0.00 0.00 1.94
2390 2818 5.372343 AAGGGGCAAATTTGAGAAGTTTT 57.628 34.783 22.31 3.60 0.00 2.43
2391 2819 6.493189 TTAAGGGGCAAATTTGAGAAGTTT 57.507 33.333 22.31 9.61 0.00 2.66
2392 2820 6.493189 TTTAAGGGGCAAATTTGAGAAGTT 57.507 33.333 22.31 9.75 0.00 2.66
2393 2821 6.269769 TCATTTAAGGGGCAAATTTGAGAAGT 59.730 34.615 22.31 5.93 0.00 3.01
2394 2822 6.700352 TCATTTAAGGGGCAAATTTGAGAAG 58.300 36.000 22.31 0.00 0.00 2.85
2395 2823 6.678568 TCATTTAAGGGGCAAATTTGAGAA 57.321 33.333 22.31 5.31 0.00 2.87
2396 2824 6.678568 TTCATTTAAGGGGCAAATTTGAGA 57.321 33.333 22.31 0.00 0.00 3.27
2404 2832 9.373450 TGCTAAATATATTCATTTAAGGGGCAA 57.627 29.630 0.00 0.00 30.88 4.52
2405 2833 8.802267 GTGCTAAATATATTCATTTAAGGGGCA 58.198 33.333 0.00 0.00 31.67 5.36
2406 2834 9.025041 AGTGCTAAATATATTCATTTAAGGGGC 57.975 33.333 0.00 0.00 31.67 5.80
2450 2878 9.598517 TGAAAAAGCTTTGTGTCTTAAATGAAT 57.401 25.926 13.54 0.00 0.00 2.57
2451 2879 8.994429 TGAAAAAGCTTTGTGTCTTAAATGAA 57.006 26.923 13.54 0.00 0.00 2.57
2452 2880 8.465999 TCTGAAAAAGCTTTGTGTCTTAAATGA 58.534 29.630 13.54 0.00 0.00 2.57
2453 2881 8.534778 GTCTGAAAAAGCTTTGTGTCTTAAATG 58.465 33.333 13.54 0.00 0.00 2.32
2454 2882 7.432252 CGTCTGAAAAAGCTTTGTGTCTTAAAT 59.568 33.333 13.54 0.00 0.00 1.40
2455 2883 6.745450 CGTCTGAAAAAGCTTTGTGTCTTAAA 59.255 34.615 13.54 0.00 0.00 1.52
2456 2884 6.092944 TCGTCTGAAAAAGCTTTGTGTCTTAA 59.907 34.615 13.54 0.00 0.00 1.85
2457 2885 5.583061 TCGTCTGAAAAAGCTTTGTGTCTTA 59.417 36.000 13.54 1.40 0.00 2.10
2458 2886 4.394920 TCGTCTGAAAAAGCTTTGTGTCTT 59.605 37.500 13.54 2.24 0.00 3.01
2459 2887 3.938963 TCGTCTGAAAAAGCTTTGTGTCT 59.061 39.130 13.54 0.00 0.00 3.41
2460 2888 4.273005 TCGTCTGAAAAAGCTTTGTGTC 57.727 40.909 13.54 11.16 0.00 3.67
2461 2889 4.394920 TCTTCGTCTGAAAAAGCTTTGTGT 59.605 37.500 13.54 0.83 32.66 3.72
2462 2890 4.908736 TCTTCGTCTGAAAAAGCTTTGTG 58.091 39.130 13.54 3.74 32.66 3.33
2463 2891 5.560966 TTCTTCGTCTGAAAAAGCTTTGT 57.439 34.783 13.54 7.12 32.66 2.83
2464 2892 6.030228 ACTTTCTTCGTCTGAAAAAGCTTTG 58.970 36.000 13.54 0.00 33.70 2.77
2465 2893 6.196079 ACTTTCTTCGTCTGAAAAAGCTTT 57.804 33.333 5.69 5.69 33.70 3.51
2466 2894 5.819825 ACTTTCTTCGTCTGAAAAAGCTT 57.180 34.783 0.00 0.00 33.70 3.74
2467 2895 5.050972 CGTACTTTCTTCGTCTGAAAAAGCT 60.051 40.000 0.00 0.00 33.70 3.74
2468 2896 5.131204 CGTACTTTCTTCGTCTGAAAAAGC 58.869 41.667 0.00 0.00 33.70 3.51
2469 2897 6.270096 ACGTACTTTCTTCGTCTGAAAAAG 57.730 37.500 0.00 0.00 33.70 2.27
2470 2898 7.489113 AGTTACGTACTTTCTTCGTCTGAAAAA 59.511 33.333 0.00 0.00 38.69 1.94
2471 2899 6.974622 AGTTACGTACTTTCTTCGTCTGAAAA 59.025 34.615 0.00 0.00 38.69 2.29
2472 2900 6.415867 CAGTTACGTACTTTCTTCGTCTGAAA 59.584 38.462 0.00 0.00 38.69 2.69
2473 2901 5.911280 CAGTTACGTACTTTCTTCGTCTGAA 59.089 40.000 0.00 0.00 38.69 3.02
2474 2902 5.008019 ACAGTTACGTACTTTCTTCGTCTGA 59.992 40.000 0.00 0.00 38.69 3.27
2475 2903 5.210715 ACAGTTACGTACTTTCTTCGTCTG 58.789 41.667 0.00 0.00 38.69 3.51
2476 2904 5.429957 ACAGTTACGTACTTTCTTCGTCT 57.570 39.130 0.00 0.00 38.69 4.18
2477 2905 5.682862 TCAACAGTTACGTACTTTCTTCGTC 59.317 40.000 0.00 0.00 38.69 4.20
2478 2906 5.581605 TCAACAGTTACGTACTTTCTTCGT 58.418 37.500 0.00 0.00 40.78 3.85
2479 2907 6.143438 ACATCAACAGTTACGTACTTTCTTCG 59.857 38.462 0.00 0.00 33.85 3.79
2480 2908 7.359014 GGACATCAACAGTTACGTACTTTCTTC 60.359 40.741 0.00 0.00 33.85 2.87
2481 2909 6.423001 GGACATCAACAGTTACGTACTTTCTT 59.577 38.462 0.00 0.00 33.85 2.52
2482 2910 5.924825 GGACATCAACAGTTACGTACTTTCT 59.075 40.000 0.00 0.00 33.85 2.52
2483 2911 5.693104 TGGACATCAACAGTTACGTACTTTC 59.307 40.000 0.00 0.00 33.85 2.62
2484 2912 5.603596 TGGACATCAACAGTTACGTACTTT 58.396 37.500 0.00 0.00 33.85 2.66
2485 2913 5.204409 TGGACATCAACAGTTACGTACTT 57.796 39.130 0.00 0.00 33.85 2.24
2486 2914 4.859304 TGGACATCAACAGTTACGTACT 57.141 40.909 0.00 0.00 37.68 2.73
2487 2915 6.367969 AGAAATGGACATCAACAGTTACGTAC 59.632 38.462 0.00 0.00 0.00 3.67
2488 2916 6.460781 AGAAATGGACATCAACAGTTACGTA 58.539 36.000 0.00 0.00 0.00 3.57
2489 2917 5.305585 AGAAATGGACATCAACAGTTACGT 58.694 37.500 0.00 0.00 0.00 3.57
2490 2918 5.862924 AGAAATGGACATCAACAGTTACG 57.137 39.130 0.00 0.00 0.00 3.18
2491 2919 6.863126 CCAAAGAAATGGACATCAACAGTTAC 59.137 38.462 0.00 0.00 43.54 2.50
2492 2920 6.015519 CCCAAAGAAATGGACATCAACAGTTA 60.016 38.462 0.00 0.00 43.54 2.24
2493 2921 5.221501 CCCAAAGAAATGGACATCAACAGTT 60.222 40.000 0.00 0.00 43.54 3.16
2494 2922 4.281688 CCCAAAGAAATGGACATCAACAGT 59.718 41.667 0.00 0.00 43.54 3.55
2495 2923 4.322198 CCCCAAAGAAATGGACATCAACAG 60.322 45.833 0.00 0.00 43.54 3.16
2496 2924 3.577848 CCCCAAAGAAATGGACATCAACA 59.422 43.478 0.00 0.00 43.54 3.33
2497 2925 3.617288 GCCCCAAAGAAATGGACATCAAC 60.617 47.826 0.00 0.00 43.54 3.18
2498 2926 2.566724 GCCCCAAAGAAATGGACATCAA 59.433 45.455 0.00 0.00 43.54 2.57
2499 2927 2.178580 GCCCCAAAGAAATGGACATCA 58.821 47.619 0.00 0.00 43.54 3.07
2500 2928 1.134946 CGCCCCAAAGAAATGGACATC 59.865 52.381 0.00 0.00 43.54 3.06
2501 2929 1.185315 CGCCCCAAAGAAATGGACAT 58.815 50.000 0.00 0.00 43.54 3.06
2502 2930 1.531739 GCGCCCCAAAGAAATGGACA 61.532 55.000 0.00 0.00 43.54 4.02
2503 2931 1.215382 GCGCCCCAAAGAAATGGAC 59.785 57.895 0.00 0.00 43.54 4.02
2504 2932 1.228706 TGCGCCCCAAAGAAATGGA 60.229 52.632 4.18 0.00 43.54 3.41
2505 2933 1.216178 CTGCGCCCCAAAGAAATGG 59.784 57.895 4.18 0.00 40.35 3.16
2506 2934 1.216178 CCTGCGCCCCAAAGAAATG 59.784 57.895 4.18 0.00 0.00 2.32
2507 2935 0.967380 CTCCTGCGCCCCAAAGAAAT 60.967 55.000 4.18 0.00 0.00 2.17
2508 2936 1.603455 CTCCTGCGCCCCAAAGAAA 60.603 57.895 4.18 0.00 0.00 2.52
2509 2937 1.485294 TACTCCTGCGCCCCAAAGAA 61.485 55.000 4.18 0.00 0.00 2.52
2510 2938 1.916273 TACTCCTGCGCCCCAAAGA 60.916 57.895 4.18 0.00 0.00 2.52
2511 2939 1.745489 GTACTCCTGCGCCCCAAAG 60.745 63.158 4.18 0.00 0.00 2.77
2512 2940 2.349755 GTACTCCTGCGCCCCAAA 59.650 61.111 4.18 0.00 0.00 3.28
2513 2941 4.077184 CGTACTCCTGCGCCCCAA 62.077 66.667 4.18 0.00 0.00 4.12
2515 2943 4.814294 CACGTACTCCTGCGCCCC 62.814 72.222 4.18 0.00 0.00 5.80
2516 2944 4.814294 CCACGTACTCCTGCGCCC 62.814 72.222 4.18 0.00 0.00 6.13
2520 2948 4.065281 ACCGCCACGTACTCCTGC 62.065 66.667 0.00 0.00 0.00 4.85
2521 2949 2.126071 CACCGCCACGTACTCCTG 60.126 66.667 0.00 0.00 0.00 3.86
2522 2950 3.379445 CCACCGCCACGTACTCCT 61.379 66.667 0.00 0.00 0.00 3.69
2523 2951 3.352338 CTCCACCGCCACGTACTCC 62.352 68.421 0.00 0.00 0.00 3.85
2524 2952 2.181021 CTCCACCGCCACGTACTC 59.819 66.667 0.00 0.00 0.00 2.59
2525 2953 3.379445 CCTCCACCGCCACGTACT 61.379 66.667 0.00 0.00 0.00 2.73
2526 2954 3.352338 CTCCTCCACCGCCACGTAC 62.352 68.421 0.00 0.00 0.00 3.67
2527 2955 3.066190 CTCCTCCACCGCCACGTA 61.066 66.667 0.00 0.00 0.00 3.57
2530 2958 4.083862 GTCCTCCTCCACCGCCAC 62.084 72.222 0.00 0.00 0.00 5.01
2533 2961 4.131088 GTCGTCCTCCTCCACCGC 62.131 72.222 0.00 0.00 0.00 5.68
2534 2962 3.450115 GGTCGTCCTCCTCCACCG 61.450 72.222 0.00 0.00 0.00 4.94
2535 2963 3.075641 GGGTCGTCCTCCTCCACC 61.076 72.222 0.00 0.00 0.00 4.61
2536 2964 3.075641 GGGGTCGTCCTCCTCCAC 61.076 72.222 0.00 0.00 35.33 4.02
2537 2965 4.753662 CGGGGTCGTCCTCCTCCA 62.754 72.222 0.00 0.00 35.33 3.86
2561 2989 0.747283 GATCTCCCACAGCAGCTTGG 60.747 60.000 13.81 13.81 0.00 3.61
2562 2990 1.088340 CGATCTCCCACAGCAGCTTG 61.088 60.000 0.00 0.00 0.00 4.01
2563 2991 1.220206 CGATCTCCCACAGCAGCTT 59.780 57.895 0.00 0.00 0.00 3.74
2564 2992 1.047596 ATCGATCTCCCACAGCAGCT 61.048 55.000 0.00 0.00 0.00 4.24
2565 2993 0.599728 GATCGATCTCCCACAGCAGC 60.600 60.000 18.29 0.00 0.00 5.25
2566 2994 0.749049 TGATCGATCTCCCACAGCAG 59.251 55.000 25.02 0.00 0.00 4.24
2567 2995 0.749049 CTGATCGATCTCCCACAGCA 59.251 55.000 25.02 2.39 0.00 4.41
2568 2996 0.599728 GCTGATCGATCTCCCACAGC 60.600 60.000 25.02 20.10 42.44 4.40
2569 2997 0.749049 TGCTGATCGATCTCCCACAG 59.251 55.000 25.02 14.78 0.00 3.66
2570 2998 0.461548 GTGCTGATCGATCTCCCACA 59.538 55.000 25.02 13.12 0.00 4.17
2571 2999 0.749649 AGTGCTGATCGATCTCCCAC 59.250 55.000 25.02 24.21 0.00 4.61
2572 3000 1.137675 CAAGTGCTGATCGATCTCCCA 59.862 52.381 25.02 15.90 0.00 4.37
2573 3001 1.410517 TCAAGTGCTGATCGATCTCCC 59.589 52.381 25.02 13.71 0.00 4.30
2574 3002 2.879002 TCAAGTGCTGATCGATCTCC 57.121 50.000 25.02 15.98 0.00 3.71
2575 3003 7.418840 AATTAATCAAGTGCTGATCGATCTC 57.581 36.000 25.02 16.86 44.43 2.75
2576 3004 7.115520 CGTAATTAATCAAGTGCTGATCGATCT 59.884 37.037 25.02 2.51 44.43 2.75
2577 3005 7.223339 CGTAATTAATCAAGTGCTGATCGATC 58.777 38.462 18.72 18.72 44.43 3.69
2578 3006 6.346919 GCGTAATTAATCAAGTGCTGATCGAT 60.347 38.462 0.00 0.00 44.43 3.59
2579 3007 5.051039 GCGTAATTAATCAAGTGCTGATCGA 60.051 40.000 0.00 0.00 44.43 3.59
2580 3008 5.050769 AGCGTAATTAATCAAGTGCTGATCG 60.051 40.000 0.00 0.00 44.43 3.69
2581 3009 6.292389 AGCGTAATTAATCAAGTGCTGATC 57.708 37.500 0.00 0.00 44.43 2.92
2583 3011 6.338146 ACTAGCGTAATTAATCAAGTGCTGA 58.662 36.000 9.52 0.00 38.81 4.26
2584 3012 6.255670 TGACTAGCGTAATTAATCAAGTGCTG 59.744 38.462 9.52 4.66 32.93 4.41
2585 3013 6.338146 TGACTAGCGTAATTAATCAAGTGCT 58.662 36.000 0.00 0.00 35.34 4.40
2586 3014 6.255887 ACTGACTAGCGTAATTAATCAAGTGC 59.744 38.462 0.00 0.00 0.00 4.40
2587 3015 7.757097 ACTGACTAGCGTAATTAATCAAGTG 57.243 36.000 0.00 0.00 0.00 3.16
2588 3016 8.684520 ACTACTGACTAGCGTAATTAATCAAGT 58.315 33.333 0.00 0.00 0.00 3.16
2589 3017 9.171701 GACTACTGACTAGCGTAATTAATCAAG 57.828 37.037 0.00 0.00 0.00 3.02
2590 3018 8.680001 TGACTACTGACTAGCGTAATTAATCAA 58.320 33.333 0.00 0.00 0.00 2.57
2591 3019 8.127327 GTGACTACTGACTAGCGTAATTAATCA 58.873 37.037 0.00 0.00 0.00 2.57
2592 3020 7.590689 GGTGACTACTGACTAGCGTAATTAATC 59.409 40.741 0.00 0.00 0.00 1.75
2593 3021 7.284944 AGGTGACTACTGACTAGCGTAATTAAT 59.715 37.037 0.00 0.00 40.61 1.40
2594 3022 6.600822 AGGTGACTACTGACTAGCGTAATTAA 59.399 38.462 0.00 0.00 40.61 1.40
2595 3023 6.118170 AGGTGACTACTGACTAGCGTAATTA 58.882 40.000 0.00 0.00 40.61 1.40
2596 3024 4.948621 AGGTGACTACTGACTAGCGTAATT 59.051 41.667 0.00 0.00 40.61 1.40
2597 3025 4.525024 AGGTGACTACTGACTAGCGTAAT 58.475 43.478 0.00 0.00 40.61 1.89
2598 3026 3.947868 AGGTGACTACTGACTAGCGTAA 58.052 45.455 0.00 0.00 40.61 3.18
2599 3027 3.623906 AGGTGACTACTGACTAGCGTA 57.376 47.619 0.00 0.00 40.61 4.42
2600 3028 2.493414 AGGTGACTACTGACTAGCGT 57.507 50.000 0.00 0.00 40.61 5.07
2611 3039 9.059260 GTGGTAAAATGAAAAAGTAGGTGACTA 57.941 33.333 0.00 0.00 43.67 2.59
2613 3041 6.854381 CGTGGTAAAATGAAAAAGTAGGTGAC 59.146 38.462 0.00 0.00 0.00 3.67
2614 3042 6.513720 GCGTGGTAAAATGAAAAAGTAGGTGA 60.514 38.462 0.00 0.00 0.00 4.02
2615 3043 5.627780 GCGTGGTAAAATGAAAAAGTAGGTG 59.372 40.000 0.00 0.00 0.00 4.00
2616 3044 5.533528 AGCGTGGTAAAATGAAAAAGTAGGT 59.466 36.000 0.00 0.00 0.00 3.08
2617 3045 6.009115 AGCGTGGTAAAATGAAAAAGTAGG 57.991 37.500 0.00 0.00 0.00 3.18
2618 3046 7.924103 AAAGCGTGGTAAAATGAAAAAGTAG 57.076 32.000 0.00 0.00 0.00 2.57
2619 3047 7.592164 GCTAAAGCGTGGTAAAATGAAAAAGTA 59.408 33.333 0.00 0.00 0.00 2.24
2620 3048 6.419710 GCTAAAGCGTGGTAAAATGAAAAAGT 59.580 34.615 0.00 0.00 0.00 2.66
2621 3049 6.807254 GCTAAAGCGTGGTAAAATGAAAAAG 58.193 36.000 0.00 0.00 0.00 2.27
2622 3050 6.757026 GCTAAAGCGTGGTAAAATGAAAAA 57.243 33.333 0.00 0.00 0.00 1.94
2638 3066 1.801178 GATATGCACCGGAGCTAAAGC 59.199 52.381 24.52 9.05 42.49 3.51
2639 3067 3.006323 AGAGATATGCACCGGAGCTAAAG 59.994 47.826 24.52 0.00 34.99 1.85
2640 3068 2.965831 AGAGATATGCACCGGAGCTAAA 59.034 45.455 24.52 10.30 34.99 1.85
2641 3069 2.598565 AGAGATATGCACCGGAGCTAA 58.401 47.619 24.52 12.80 34.99 3.09
2642 3070 2.294449 AGAGATATGCACCGGAGCTA 57.706 50.000 24.52 14.17 34.99 3.32
2643 3071 2.166829 CTAGAGATATGCACCGGAGCT 58.833 52.381 24.52 12.48 34.99 4.09
2644 3072 1.403514 GCTAGAGATATGCACCGGAGC 60.404 57.143 17.78 17.78 0.00 4.70
2645 3073 2.163412 GAGCTAGAGATATGCACCGGAG 59.837 54.545 9.46 0.00 0.00 4.63
2646 3074 2.163509 GAGCTAGAGATATGCACCGGA 58.836 52.381 9.46 0.00 0.00 5.14
2647 3075 1.135546 CGAGCTAGAGATATGCACCGG 60.136 57.143 0.00 0.00 0.00 5.28
2648 3076 1.537638 ACGAGCTAGAGATATGCACCG 59.462 52.381 0.00 0.00 0.00 4.94
2649 3077 2.554462 TGACGAGCTAGAGATATGCACC 59.446 50.000 0.00 0.00 0.00 5.01
2650 3078 3.500299 TCTGACGAGCTAGAGATATGCAC 59.500 47.826 0.00 0.00 0.00 4.57
2651 3079 3.744660 TCTGACGAGCTAGAGATATGCA 58.255 45.455 0.00 0.00 0.00 3.96
2652 3080 3.751175 ACTCTGACGAGCTAGAGATATGC 59.249 47.826 16.45 0.00 42.34 3.14
2653 3081 5.237815 AGACTCTGACGAGCTAGAGATATG 58.762 45.833 16.45 0.00 42.34 1.78
2654 3082 5.483685 AGACTCTGACGAGCTAGAGATAT 57.516 43.478 16.45 0.00 42.34 1.63
2655 3083 4.948341 AGACTCTGACGAGCTAGAGATA 57.052 45.455 16.45 0.00 42.34 1.98
2656 3084 3.838244 AGACTCTGACGAGCTAGAGAT 57.162 47.619 16.45 3.74 42.34 2.75
2657 3085 3.620427 AAGACTCTGACGAGCTAGAGA 57.380 47.619 16.45 2.14 42.34 3.10
2658 3086 3.247648 GCTAAGACTCTGACGAGCTAGAG 59.752 52.174 9.29 9.29 44.63 2.43
2659 3087 3.199677 GCTAAGACTCTGACGAGCTAGA 58.800 50.000 0.00 0.00 41.09 2.43
2660 3088 2.939756 TGCTAAGACTCTGACGAGCTAG 59.060 50.000 0.00 0.00 41.09 3.42
2661 3089 2.987232 TGCTAAGACTCTGACGAGCTA 58.013 47.619 0.00 0.00 41.09 3.32
2662 3090 1.827681 TGCTAAGACTCTGACGAGCT 58.172 50.000 0.00 0.00 41.09 4.09
2663 3091 2.638556 TTGCTAAGACTCTGACGAGC 57.361 50.000 0.00 0.00 41.09 5.03
2664 3092 3.856521 CACATTGCTAAGACTCTGACGAG 59.143 47.826 0.00 0.00 43.10 4.18
2665 3093 3.506067 TCACATTGCTAAGACTCTGACGA 59.494 43.478 0.00 0.00 0.00 4.20
2666 3094 3.838120 TCACATTGCTAAGACTCTGACG 58.162 45.455 0.00 0.00 0.00 4.35
2667 3095 4.815269 ACTCACATTGCTAAGACTCTGAC 58.185 43.478 0.00 0.00 0.00 3.51
2668 3096 6.378280 TCATACTCACATTGCTAAGACTCTGA 59.622 38.462 0.00 0.00 0.00 3.27
2669 3097 6.567959 TCATACTCACATTGCTAAGACTCTG 58.432 40.000 0.00 0.00 0.00 3.35
2670 3098 6.782082 TCATACTCACATTGCTAAGACTCT 57.218 37.500 0.00 0.00 0.00 3.24
2671 3099 8.430801 AATTCATACTCACATTGCTAAGACTC 57.569 34.615 0.00 0.00 0.00 3.36
2699 3127 9.432982 TTTACAATGGAATAGCTTTTGGGATAT 57.567 29.630 0.00 0.00 0.00 1.63
2700 3128 8.830915 TTTACAATGGAATAGCTTTTGGGATA 57.169 30.769 0.00 0.00 0.00 2.59
2701 3129 7.732222 TTTACAATGGAATAGCTTTTGGGAT 57.268 32.000 0.00 0.00 0.00 3.85
2702 3130 7.546250 TTTTACAATGGAATAGCTTTTGGGA 57.454 32.000 0.00 0.00 0.00 4.37
2703 3131 9.533253 CTATTTTACAATGGAATAGCTTTTGGG 57.467 33.333 0.00 0.00 29.63 4.12
2774 3202 9.598517 AACAATTTGATGAACATTACACAAGTT 57.401 25.926 2.79 0.00 0.00 2.66
2775 3203 9.598517 AAACAATTTGATGAACATTACACAAGT 57.401 25.926 2.79 0.00 0.00 3.16
2784 3212 9.643693 GTCCAAGATAAACAATTTGATGAACAT 57.356 29.630 2.79 0.00 0.00 2.71
2785 3213 8.637099 TGTCCAAGATAAACAATTTGATGAACA 58.363 29.630 2.79 0.00 0.00 3.18
2786 3214 9.643693 ATGTCCAAGATAAACAATTTGATGAAC 57.356 29.630 2.79 0.00 0.00 3.18
2787 3215 9.642327 CATGTCCAAGATAAACAATTTGATGAA 57.358 29.630 2.79 0.00 0.00 2.57
2788 3216 8.805175 ACATGTCCAAGATAAACAATTTGATGA 58.195 29.630 2.79 0.00 0.00 2.92
2789 3217 8.865978 CACATGTCCAAGATAAACAATTTGATG 58.134 33.333 2.79 0.00 0.00 3.07
2790 3218 8.587608 ACACATGTCCAAGATAAACAATTTGAT 58.412 29.630 2.79 0.00 0.00 2.57
2791 3219 7.866898 CACACATGTCCAAGATAAACAATTTGA 59.133 33.333 2.79 0.00 0.00 2.69
2792 3220 7.866898 TCACACATGTCCAAGATAAACAATTTG 59.133 33.333 0.00 0.00 0.00 2.32
2793 3221 7.867403 GTCACACATGTCCAAGATAAACAATTT 59.133 33.333 0.00 0.00 0.00 1.82
2794 3222 7.370383 GTCACACATGTCCAAGATAAACAATT 58.630 34.615 0.00 0.00 0.00 2.32
2795 3223 6.071952 GGTCACACATGTCCAAGATAAACAAT 60.072 38.462 0.00 0.00 34.45 2.71
2796 3224 5.240623 GGTCACACATGTCCAAGATAAACAA 59.759 40.000 0.00 0.00 34.45 2.83
2797 3225 4.759693 GGTCACACATGTCCAAGATAAACA 59.240 41.667 0.00 0.00 34.45 2.83
2798 3226 5.003804 AGGTCACACATGTCCAAGATAAAC 58.996 41.667 0.00 0.00 36.56 2.01
2799 3227 5.241403 AGGTCACACATGTCCAAGATAAA 57.759 39.130 0.00 0.00 36.56 1.40
2800 3228 4.908601 AGGTCACACATGTCCAAGATAA 57.091 40.909 0.00 0.00 36.56 1.75
2801 3229 6.560003 ATTAGGTCACACATGTCCAAGATA 57.440 37.500 0.00 0.00 36.56 1.98
2802 3230 4.908601 TTAGGTCACACATGTCCAAGAT 57.091 40.909 0.00 0.00 36.56 2.40
2803 3231 4.908601 ATTAGGTCACACATGTCCAAGA 57.091 40.909 0.00 0.00 36.56 3.02
2804 3232 6.128007 GGTTTATTAGGTCACACATGTCCAAG 60.128 42.308 0.00 0.00 36.56 3.61
2805 3233 5.708230 GGTTTATTAGGTCACACATGTCCAA 59.292 40.000 0.00 0.00 36.56 3.53
2806 3234 5.250200 GGTTTATTAGGTCACACATGTCCA 58.750 41.667 0.00 0.00 36.56 4.02
2807 3235 4.331717 CGGTTTATTAGGTCACACATGTCC 59.668 45.833 0.00 0.00 34.50 4.02
2808 3236 5.172934 TCGGTTTATTAGGTCACACATGTC 58.827 41.667 0.00 0.00 0.00 3.06
2809 3237 5.155278 TCGGTTTATTAGGTCACACATGT 57.845 39.130 0.00 0.00 0.00 3.21
2810 3238 6.489127 TTTCGGTTTATTAGGTCACACATG 57.511 37.500 0.00 0.00 0.00 3.21
2811 3239 7.446013 TCTTTTTCGGTTTATTAGGTCACACAT 59.554 33.333 0.00 0.00 0.00 3.21
2812 3240 6.766944 TCTTTTTCGGTTTATTAGGTCACACA 59.233 34.615 0.00 0.00 0.00 3.72
2813 3241 7.193377 TCTTTTTCGGTTTATTAGGTCACAC 57.807 36.000 0.00 0.00 0.00 3.82
2814 3242 6.428771 CCTCTTTTTCGGTTTATTAGGTCACA 59.571 38.462 0.00 0.00 0.00 3.58
2815 3243 6.652062 TCCTCTTTTTCGGTTTATTAGGTCAC 59.348 38.462 0.00 0.00 0.00 3.67
2816 3244 6.771573 TCCTCTTTTTCGGTTTATTAGGTCA 58.228 36.000 0.00 0.00 0.00 4.02
2817 3245 7.605309 TCTTCCTCTTTTTCGGTTTATTAGGTC 59.395 37.037 0.00 0.00 0.00 3.85
2818 3246 7.455891 TCTTCCTCTTTTTCGGTTTATTAGGT 58.544 34.615 0.00 0.00 0.00 3.08
2819 3247 7.606839 ACTCTTCCTCTTTTTCGGTTTATTAGG 59.393 37.037 0.00 0.00 0.00 2.69
2820 3248 8.549338 ACTCTTCCTCTTTTTCGGTTTATTAG 57.451 34.615 0.00 0.00 0.00 1.73
2822 3250 8.947115 CATACTCTTCCTCTTTTTCGGTTTATT 58.053 33.333 0.00 0.00 0.00 1.40
2823 3251 8.319146 TCATACTCTTCCTCTTTTTCGGTTTAT 58.681 33.333 0.00 0.00 0.00 1.40
2824 3252 7.673180 TCATACTCTTCCTCTTTTTCGGTTTA 58.327 34.615 0.00 0.00 0.00 2.01
2825 3253 6.531021 TCATACTCTTCCTCTTTTTCGGTTT 58.469 36.000 0.00 0.00 0.00 3.27
2826 3254 6.110411 TCATACTCTTCCTCTTTTTCGGTT 57.890 37.500 0.00 0.00 0.00 4.44
2827 3255 5.740290 TCATACTCTTCCTCTTTTTCGGT 57.260 39.130 0.00 0.00 0.00 4.69
2828 3256 5.007136 GCATCATACTCTTCCTCTTTTTCGG 59.993 44.000 0.00 0.00 0.00 4.30
2829 3257 5.814705 AGCATCATACTCTTCCTCTTTTTCG 59.185 40.000 0.00 0.00 0.00 3.46
2830 3258 7.622893 AAGCATCATACTCTTCCTCTTTTTC 57.377 36.000 0.00 0.00 0.00 2.29
2831 3259 9.520515 TTAAAGCATCATACTCTTCCTCTTTTT 57.479 29.630 0.00 0.00 0.00 1.94
2832 3260 9.692325 ATTAAAGCATCATACTCTTCCTCTTTT 57.308 29.630 0.00 0.00 0.00 2.27
2833 3261 9.336171 GATTAAAGCATCATACTCTTCCTCTTT 57.664 33.333 0.00 0.00 0.00 2.52
2834 3262 8.489489 TGATTAAAGCATCATACTCTTCCTCTT 58.511 33.333 0.00 0.00 0.00 2.85
2835 3263 8.027524 TGATTAAAGCATCATACTCTTCCTCT 57.972 34.615 0.00 0.00 0.00 3.69
2836 3264 8.719648 CATGATTAAAGCATCATACTCTTCCTC 58.280 37.037 0.00 0.00 41.20 3.71
2837 3265 8.435187 TCATGATTAAAGCATCATACTCTTCCT 58.565 33.333 0.00 0.00 41.20 3.36
2838 3266 8.613060 TCATGATTAAAGCATCATACTCTTCC 57.387 34.615 0.00 0.00 41.20 3.46
2839 3267 8.229137 GCTCATGATTAAAGCATCATACTCTTC 58.771 37.037 0.00 0.00 41.20 2.87
2840 3268 7.095313 CGCTCATGATTAAAGCATCATACTCTT 60.095 37.037 0.00 0.00 41.20 2.85
2841 3269 6.368243 CGCTCATGATTAAAGCATCATACTCT 59.632 38.462 0.00 0.00 41.20 3.24
2842 3270 6.401903 CCGCTCATGATTAAAGCATCATACTC 60.402 42.308 0.00 0.00 41.20 2.59
2843 3271 5.410746 CCGCTCATGATTAAAGCATCATACT 59.589 40.000 0.00 0.00 41.20 2.12
2844 3272 5.391310 CCCGCTCATGATTAAAGCATCATAC 60.391 44.000 0.00 0.00 41.20 2.39
2845 3273 4.696877 CCCGCTCATGATTAAAGCATCATA 59.303 41.667 0.00 0.00 41.20 2.15
2846 3274 3.504906 CCCGCTCATGATTAAAGCATCAT 59.495 43.478 0.00 0.00 43.49 2.45
2847 3275 2.880268 CCCGCTCATGATTAAAGCATCA 59.120 45.455 0.00 0.00 37.58 3.07
2848 3276 2.227388 CCCCGCTCATGATTAAAGCATC 59.773 50.000 0.00 0.00 35.76 3.91
2849 3277 2.233271 CCCCGCTCATGATTAAAGCAT 58.767 47.619 0.00 0.00 35.76 3.79
2850 3278 1.679139 CCCCGCTCATGATTAAAGCA 58.321 50.000 0.00 0.00 35.76 3.91
2851 3279 0.954452 CCCCCGCTCATGATTAAAGC 59.046 55.000 0.00 0.00 0.00 3.51
2904 3338 4.389576 CCGACAGCGCACAAAGGC 62.390 66.667 11.47 0.00 35.83 4.35
2978 3414 2.706890 GGACGCAAAGATCCAAGGTTA 58.293 47.619 0.00 0.00 34.87 2.85
2991 3427 0.881159 CCTAAACACACCGGACGCAA 60.881 55.000 9.46 0.00 0.00 4.85
3047 3490 2.887463 TTATTTAGACGCGCCGCCGT 62.887 55.000 5.73 4.67 45.30 5.68
3061 3504 4.652822 ACAAAGCCCGAAGAGACTTATTT 58.347 39.130 0.00 0.00 0.00 1.40
3069 3512 1.001378 CCACAAACAAAGCCCGAAGAG 60.001 52.381 0.00 0.00 0.00 2.85
3085 3528 0.032912 TAGAGCCCCGTATGACCACA 60.033 55.000 0.00 0.00 0.00 4.17
3087 3530 1.117150 GTTAGAGCCCCGTATGACCA 58.883 55.000 0.00 0.00 0.00 4.02
3093 3536 2.037144 GATGAAGGTTAGAGCCCCGTA 58.963 52.381 0.00 0.00 0.00 4.02
3105 3548 1.127343 GCTGGCTCCTAGATGAAGGT 58.873 55.000 0.00 0.00 37.91 3.50
3157 3601 1.907739 GCCAGACACCATAGCCTGA 59.092 57.895 0.00 0.00 0.00 3.86
3159 3603 2.735772 CCGCCAGACACCATAGCCT 61.736 63.158 0.00 0.00 0.00 4.58
3193 3638 3.814504 ACCCATCTGAGAACCAAACAT 57.185 42.857 0.00 0.00 0.00 2.71
3194 3639 3.009033 CCTACCCATCTGAGAACCAAACA 59.991 47.826 0.00 0.00 0.00 2.83
3202 3647 2.187958 CAACCACCTACCCATCTGAGA 58.812 52.381 0.00 0.00 0.00 3.27
3214 3659 1.434188 TCATCTCCACACAACCACCT 58.566 50.000 0.00 0.00 0.00 4.00
3235 3682 6.531503 TCATACTGACGAGGAAGAAGAATT 57.468 37.500 0.00 0.00 0.00 2.17
3266 3716 6.143438 GCACAAAGAATGATGAAGAAACACAG 59.857 38.462 0.00 0.00 0.00 3.66
3281 3731 0.601558 CCAGCAGCAGCACAAAGAAT 59.398 50.000 3.17 0.00 45.49 2.40
3344 3794 0.734889 GAACTACGATCCGGTTCCGA 59.265 55.000 13.08 0.00 34.90 4.55
3373 3823 1.148310 CGCTATATGTGCCCCTTTCG 58.852 55.000 0.00 0.00 0.00 3.46
3419 3869 2.974692 ATCCAACACGCCTGCACCAA 62.975 55.000 0.00 0.00 0.00 3.67
3455 3905 2.700773 GCTCCGGCGCCAAAAAGAT 61.701 57.895 28.98 0.00 0.00 2.40
3485 3935 0.464916 AATCATCGCCATGCTGCTCA 60.465 50.000 0.00 0.00 0.00 4.26
3559 4016 5.533112 TGAATCTTGAGAGAAGACCCCTAT 58.467 41.667 0.00 0.00 35.07 2.57
3560 4017 4.947883 TGAATCTTGAGAGAAGACCCCTA 58.052 43.478 0.00 0.00 35.07 3.53
3573 4038 9.251792 CTTTGTGTCATCAATTTTGAATCTTGA 57.748 29.630 0.00 0.00 41.13 3.02
3583 4048 4.278170 TCCGAAGCTTTGTGTCATCAATTT 59.722 37.500 12.77 0.00 0.00 1.82
3584 4049 3.820467 TCCGAAGCTTTGTGTCATCAATT 59.180 39.130 12.77 0.00 0.00 2.32
3586 4051 2.807967 CTCCGAAGCTTTGTGTCATCAA 59.192 45.455 12.77 0.00 0.00 2.57
3597 4062 1.971357 TCTTGAAGACCTCCGAAGCTT 59.029 47.619 0.00 0.00 0.00 3.74
3615 4080 2.307098 ACATGAAGCCCTACAAAGCTCT 59.693 45.455 0.00 0.00 38.74 4.09
3616 4081 2.716217 ACATGAAGCCCTACAAAGCTC 58.284 47.619 0.00 0.00 38.74 4.09
3617 4082 2.887151 ACATGAAGCCCTACAAAGCT 57.113 45.000 0.00 0.00 42.40 3.74
3618 4083 3.942130 AAACATGAAGCCCTACAAAGC 57.058 42.857 0.00 0.00 0.00 3.51
3619 4084 3.989817 GCAAAACATGAAGCCCTACAAAG 59.010 43.478 0.00 0.00 0.00 2.77
3620 4085 3.640967 AGCAAAACATGAAGCCCTACAAA 59.359 39.130 0.00 0.00 0.00 2.83
3621 4086 3.230134 AGCAAAACATGAAGCCCTACAA 58.770 40.909 0.00 0.00 0.00 2.41
3622 4087 2.875296 AGCAAAACATGAAGCCCTACA 58.125 42.857 0.00 0.00 0.00 2.74
3623 4088 3.942130 AAGCAAAACATGAAGCCCTAC 57.058 42.857 0.00 0.00 0.00 3.18
3624 4089 5.480073 ACAATAAGCAAAACATGAAGCCCTA 59.520 36.000 0.00 0.00 0.00 3.53
3625 4090 4.284234 ACAATAAGCAAAACATGAAGCCCT 59.716 37.500 0.00 0.00 0.00 5.19
3626 4091 4.568956 ACAATAAGCAAAACATGAAGCCC 58.431 39.130 0.00 0.00 0.00 5.19
3627 4092 6.544038 AAACAATAAGCAAAACATGAAGCC 57.456 33.333 0.00 0.00 0.00 4.35
3628 4093 8.223100 CCTAAAACAATAAGCAAAACATGAAGC 58.777 33.333 0.00 0.00 0.00 3.86
3629 4094 8.711457 CCCTAAAACAATAAGCAAAACATGAAG 58.289 33.333 0.00 0.00 0.00 3.02
3630 4095 8.207545 ACCCTAAAACAATAAGCAAAACATGAA 58.792 29.630 0.00 0.00 0.00 2.57
3631 4096 7.655328 CACCCTAAAACAATAAGCAAAACATGA 59.345 33.333 0.00 0.00 0.00 3.07
3632 4097 7.440856 ACACCCTAAAACAATAAGCAAAACATG 59.559 33.333 0.00 0.00 0.00 3.21
3633 4098 7.505258 ACACCCTAAAACAATAAGCAAAACAT 58.495 30.769 0.00 0.00 0.00 2.71
3691 4156 2.159327 ACAGTTCTTAACCCCGAACG 57.841 50.000 0.00 0.00 43.15 3.95
3693 4158 6.819649 CACAATATACAGTTCTTAACCCCGAA 59.180 38.462 0.00 0.00 0.00 4.30
3694 4159 6.070653 ACACAATATACAGTTCTTAACCCCGA 60.071 38.462 0.00 0.00 0.00 5.14
3695 4160 6.110707 ACACAATATACAGTTCTTAACCCCG 58.889 40.000 0.00 0.00 0.00 5.73
3711 4185 7.910162 GCTTACATTCAAATCACGACACAATAT 59.090 33.333 0.00 0.00 0.00 1.28
3716 4190 5.029650 TGCTTACATTCAAATCACGACAC 57.970 39.130 0.00 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.