Multiple sequence alignment - TraesCS5A01G347200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G347200 chr5A 100.000 5786 0 0 680 6465 549573700 549579485 0.000000e+00 10685.0
1 TraesCS5A01G347200 chr5A 100.000 449 0 0 1 449 549573021 549573469 0.000000e+00 830.0
2 TraesCS5A01G347200 chr5B 94.061 2593 105 20 813 3371 529488448 529491025 0.000000e+00 3890.0
3 TraesCS5A01G347200 chr5B 90.110 2174 146 25 3598 5738 529491181 529493318 0.000000e+00 2760.0
4 TraesCS5A01G347200 chr5B 86.544 327 14 15 5 328 529487676 529487975 3.740000e-87 333.0
5 TraesCS5A01G347200 chr5B 84.286 70 4 4 6171 6240 529493771 529493833 1.950000e-05 62.1
6 TraesCS5A01G347200 chr5D 91.643 2872 132 42 680 3473 435775922 435778763 0.000000e+00 3875.0
7 TraesCS5A01G347200 chr5D 93.619 2241 123 12 3598 5820 435778767 435781005 0.000000e+00 3328.0
8 TraesCS5A01G347200 chr5D 85.088 456 16 21 1 449 435775500 435775910 1.000000e-112 418.0
9 TraesCS5A01G347200 chr5D 86.081 273 12 10 5920 6166 435781106 435781378 2.970000e-68 270.0
10 TraesCS5A01G347200 chr7B 81.773 203 29 7 3540 3740 478472668 478472472 5.190000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G347200 chr5A 549573021 549579485 6464 False 5757.500 10685 100.00000 1 6465 2 chr5A.!!$F1 6464
1 TraesCS5A01G347200 chr5B 529487676 529493833 6157 False 1761.275 3890 88.75025 5 6240 4 chr5B.!!$F1 6235
2 TraesCS5A01G347200 chr5D 435775500 435781378 5878 False 1972.750 3875 89.10775 1 6166 4 chr5D.!!$F1 6165

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
129 138 0.764752 ATAAAGAGCGGGGGAGGAGG 60.765 60.000 0.00 0.00 0.00 4.30 F
278 300 1.075600 CTCTCCTCCCTCCCCAGTC 60.076 68.421 0.00 0.00 0.00 3.51 F
1470 1767 1.226688 CGACGACGAGCACATCCAT 60.227 57.895 0.00 0.00 42.66 3.41 F
1986 2283 1.368493 CAACATCAGCTATGCGCGC 60.368 57.895 27.26 27.26 45.59 6.86 F
3488 3894 0.113580 GTGGGGGTGGCCTCTAAAAA 59.886 55.000 3.32 0.00 0.00 1.94 F
3539 3945 0.028374 ACGTTTCGAAACTTTGGCCG 59.972 50.000 31.88 21.77 36.77 6.13 F
3544 3950 0.039617 TCGAAACTTTGGCCGCATTG 60.040 50.000 0.00 0.00 0.00 2.82 F
3547 3953 0.106521 AAACTTTGGCCGCATTGCTT 59.893 45.000 7.12 0.00 0.00 3.91 F
5149 5560 0.036022 GACCTTCACTGCTGCTTCCT 59.964 55.000 0.00 0.00 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1778 2075 0.392706 CATGCTGCTGTATCCCGGTA 59.607 55.000 0.00 0.00 0.00 4.02 R
2235 2532 1.907807 ACCGCCGTAGTAACCACCA 60.908 57.895 0.00 0.00 0.00 4.17 R
2987 3299 0.041238 ACTCCTCCTCCATTGTCGGA 59.959 55.000 0.00 0.00 0.00 4.55 R
3520 3926 0.028374 CGGCCAAAGTTTCGAAACGT 59.972 50.000 29.72 25.73 43.51 3.99 R
4812 5223 0.179001 TCTCGGATATCCTCGCCACA 60.179 55.000 19.61 0.00 0.00 4.17 R
4926 5337 0.395724 GGCCCCTGTCCATACCTTTG 60.396 60.000 0.00 0.00 0.00 2.77 R
4932 5343 0.399091 CTCTCAGGCCCCTGTCCATA 60.399 60.000 13.66 0.00 43.96 2.74 R
5236 5647 0.665369 GCAGCAAACACAGACCATGC 60.665 55.000 0.00 0.00 37.28 4.06 R
6301 6876 0.030101 ACACCCGTTGCGTGAAAATG 59.970 50.000 0.00 0.00 35.17 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.793144 CAGCCTCGCAAACTCGCC 61.793 66.667 0.00 0.00 0.00 5.54
77 78 6.915843 ACAAACAAACTTTGGAGCTAATTACG 59.084 34.615 6.47 0.00 33.92 3.18
93 99 6.037391 GCTAATTACGTACCTGGCAAACAATA 59.963 38.462 0.00 0.00 0.00 1.90
96 102 3.596214 ACGTACCTGGCAAACAATAGAG 58.404 45.455 0.00 0.00 0.00 2.43
97 103 3.259876 ACGTACCTGGCAAACAATAGAGA 59.740 43.478 0.00 0.00 0.00 3.10
98 104 3.865745 CGTACCTGGCAAACAATAGAGAG 59.134 47.826 0.00 0.00 0.00 3.20
99 105 4.381612 CGTACCTGGCAAACAATAGAGAGA 60.382 45.833 0.00 0.00 0.00 3.10
100 106 4.851639 ACCTGGCAAACAATAGAGAGAT 57.148 40.909 0.00 0.00 0.00 2.75
119 125 9.383519 AGAGAGATAGAGAGATTATAAAGAGCG 57.616 37.037 0.00 0.00 0.00 5.03
129 138 0.764752 ATAAAGAGCGGGGGAGGAGG 60.765 60.000 0.00 0.00 0.00 4.30
130 139 1.882189 TAAAGAGCGGGGGAGGAGGA 61.882 60.000 0.00 0.00 0.00 3.71
131 140 3.687828 AAGAGCGGGGGAGGAGGAG 62.688 68.421 0.00 0.00 0.00 3.69
243 255 2.127297 ATAGCCCCACCACCACCT 59.873 61.111 0.00 0.00 0.00 4.00
249 261 3.174987 CCACCACCACCTCCACCA 61.175 66.667 0.00 0.00 0.00 4.17
273 295 2.520741 CGCTCTCTCCTCCCTCCC 60.521 72.222 0.00 0.00 0.00 4.30
276 298 1.232792 CTCTCTCCTCCCTCCCCAG 59.767 68.421 0.00 0.00 0.00 4.45
277 299 1.547755 TCTCTCCTCCCTCCCCAGT 60.548 63.158 0.00 0.00 0.00 4.00
278 300 1.075600 CTCTCCTCCCTCCCCAGTC 60.076 68.421 0.00 0.00 0.00 3.51
279 301 2.041405 CTCCTCCCTCCCCAGTCC 60.041 72.222 0.00 0.00 0.00 3.85
280 302 2.540910 TCCTCCCTCCCCAGTCCT 60.541 66.667 0.00 0.00 0.00 3.85
281 303 2.041405 CCTCCCTCCCCAGTCCTC 60.041 72.222 0.00 0.00 0.00 3.71
282 304 2.780693 CTCCCTCCCCAGTCCTCA 59.219 66.667 0.00 0.00 0.00 3.86
283 305 1.687493 CTCCCTCCCCAGTCCTCAC 60.687 68.421 0.00 0.00 0.00 3.51
284 306 2.689034 CCCTCCCCAGTCCTCACC 60.689 72.222 0.00 0.00 0.00 4.02
285 307 3.077556 CCTCCCCAGTCCTCACCG 61.078 72.222 0.00 0.00 0.00 4.94
286 308 2.283966 CTCCCCAGTCCTCACCGT 60.284 66.667 0.00 0.00 0.00 4.83
391 414 4.811364 GCAAGCCCAGCCTCCCTC 62.811 72.222 0.00 0.00 0.00 4.30
392 415 4.120755 CAAGCCCAGCCTCCCTCC 62.121 72.222 0.00 0.00 0.00 4.30
396 419 4.101077 CCCAGCCTCCCTCCCTCT 62.101 72.222 0.00 0.00 0.00 3.69
442 699 3.083349 CGCTCCTCCCATCCCACA 61.083 66.667 0.00 0.00 0.00 4.17
713 970 1.609501 CCTTCCGTCCTCCACTCCA 60.610 63.158 0.00 0.00 0.00 3.86
720 977 1.353091 GTCCTCCACTCCACTTTCCT 58.647 55.000 0.00 0.00 0.00 3.36
721 978 1.700186 GTCCTCCACTCCACTTTCCTT 59.300 52.381 0.00 0.00 0.00 3.36
722 979 2.106684 GTCCTCCACTCCACTTTCCTTT 59.893 50.000 0.00 0.00 0.00 3.11
726 983 2.372172 TCCACTCCACTTTCCTTTCTCC 59.628 50.000 0.00 0.00 0.00 3.71
727 984 2.553247 CCACTCCACTTTCCTTTCTCCC 60.553 54.545 0.00 0.00 0.00 4.30
728 985 1.705745 ACTCCACTTTCCTTTCTCCCC 59.294 52.381 0.00 0.00 0.00 4.81
934 1209 3.706373 CCAGTCCCCTCCACACCG 61.706 72.222 0.00 0.00 0.00 4.94
936 1211 2.603776 AGTCCCCTCCACACCGTC 60.604 66.667 0.00 0.00 0.00 4.79
937 1212 3.703127 GTCCCCTCCACACCGTCC 61.703 72.222 0.00 0.00 0.00 4.79
985 1265 1.479368 CCTCTAGCCCAGATCTGCCC 61.479 65.000 17.76 9.72 31.13 5.36
987 1267 2.448542 TAGCCCAGATCTGCCCCC 60.449 66.667 17.76 4.80 0.00 5.40
1082 1377 5.712446 AGGGGAATTAAAAGACTTCAGCTTC 59.288 40.000 0.00 0.00 0.00 3.86
1087 1382 2.464157 AAAGACTTCAGCTTCCGAGG 57.536 50.000 0.00 0.00 0.00 4.63
1100 1395 3.898509 CGAGGCTCCTCTGCTCCG 61.899 72.222 9.32 0.00 40.69 4.63
1470 1767 1.226688 CGACGACGAGCACATCCAT 60.227 57.895 0.00 0.00 42.66 3.41
1503 1800 1.710816 GGGACTCCGATTCTGAGGAT 58.289 55.000 9.53 0.00 35.75 3.24
1575 1872 2.655685 GAGATCGTTCGCTCCGCC 60.656 66.667 0.00 0.00 0.00 6.13
1752 2049 1.481056 GCTATGACCCGGGCTATGGT 61.481 60.000 24.08 0.00 37.64 3.55
1986 2283 1.368493 CAACATCAGCTATGCGCGC 60.368 57.895 27.26 27.26 45.59 6.86
2063 2360 2.821991 ACGGTTCAGACCTTCTTCAG 57.178 50.000 0.00 0.00 44.20 3.02
2235 2532 7.179338 CAGAGTTCCTATAACCAGTATGCCTAT 59.821 40.741 0.00 0.00 31.97 2.57
2247 2544 5.510861 CCAGTATGCCTATGGTGGTTACTAC 60.511 48.000 0.00 0.00 31.64 2.73
2313 2610 4.329545 GAGGAAGCCGTGCCACCA 62.330 66.667 0.00 0.00 0.00 4.17
2508 2805 3.118223 AGGTAGTCAAGGAAGCTTATGGC 60.118 47.826 0.00 0.39 42.19 4.40
2737 3049 4.859798 CAGGTTCAGAGAAGACGTATGTTC 59.140 45.833 0.00 0.00 0.00 3.18
2796 3108 2.743928 CGTGCCTCCAGTTCAGCC 60.744 66.667 0.00 0.00 0.00 4.85
2823 3135 2.508526 GTGTCCAAGATGCTTGAGGTT 58.491 47.619 8.64 0.00 0.00 3.50
2916 3228 4.007659 ACGGTTCTGTCTTGTTCTTTTGT 58.992 39.130 0.00 0.00 0.00 2.83
2976 3288 4.313282 CAATCCAGTATCTGCGATGATGT 58.687 43.478 0.00 0.00 0.00 3.06
2987 3299 2.824936 TGCGATGATGTTTTGTGGGATT 59.175 40.909 0.00 0.00 0.00 3.01
3062 3374 1.901650 GCAACCTTTCCTCGACGCTG 61.902 60.000 0.00 0.00 0.00 5.18
3065 3377 1.667830 CCTTTCCTCGACGCTGCAA 60.668 57.895 0.00 0.00 0.00 4.08
3160 3472 2.029020 TCTCAGGAACATTGTGAGTCGG 60.029 50.000 0.00 0.00 39.06 4.79
3164 3476 1.676014 GGAACATTGTGAGTCGGGAGG 60.676 57.143 0.00 0.00 0.00 4.30
3165 3477 0.321653 AACATTGTGAGTCGGGAGGC 60.322 55.000 0.00 0.00 0.00 4.70
3193 3505 3.681593 TTTTGGCAATGTGATTCCCAG 57.318 42.857 0.00 0.00 0.00 4.45
3197 3509 1.203052 GGCAATGTGATTCCCAGTGTG 59.797 52.381 0.00 0.00 30.97 3.82
3198 3510 2.161855 GCAATGTGATTCCCAGTGTGA 58.838 47.619 0.00 0.00 30.97 3.58
3207 3542 6.775142 TGTGATTCCCAGTGTGAAAATTTAGA 59.225 34.615 0.00 0.00 0.00 2.10
3208 3543 7.084486 GTGATTCCCAGTGTGAAAATTTAGAC 58.916 38.462 0.00 0.00 0.00 2.59
3250 3585 6.710744 AGTATGTGAAAGTTTCGGATTTGTCT 59.289 34.615 10.92 0.23 0.00 3.41
3261 3596 6.844696 TTCGGATTTGTCTATTGTCTATGC 57.155 37.500 0.00 0.00 0.00 3.14
3275 3610 6.425210 TTGTCTATGCTACTGGCTGATTAT 57.575 37.500 0.00 0.00 42.39 1.28
3314 3649 5.180271 TCTTATTTTGTAAGGGGTAGCACG 58.820 41.667 0.00 0.00 0.00 5.34
3317 3652 4.556592 TTTTGTAAGGGGTAGCACGTAT 57.443 40.909 0.00 0.00 0.00 3.06
3324 3665 5.937975 AAGGGGTAGCACGTATTTAGTTA 57.062 39.130 0.00 0.00 0.00 2.24
3329 3670 5.332808 GGGTAGCACGTATTTAGTTATTGCG 60.333 44.000 0.00 0.00 33.68 4.85
3351 3692 5.137403 CGGCTAAAATTACGCATCATGTAC 58.863 41.667 0.00 0.00 0.00 2.90
3356 3697 9.155053 GCTAAAATTACGCATCATGTACTTAAC 57.845 33.333 0.00 0.00 0.00 2.01
3360 3701 7.843490 ATTACGCATCATGTACTTAACTGTT 57.157 32.000 0.00 0.00 0.00 3.16
3457 3863 4.961438 AATGGTTGGTTCTTTGATGCTT 57.039 36.364 0.00 0.00 0.00 3.91
3468 3874 7.814107 TGGTTCTTTGATGCTTATTGAAATGAC 59.186 33.333 0.00 0.00 0.00 3.06
3473 3879 4.096231 TGATGCTTATTGAAATGACGTGGG 59.904 41.667 0.00 0.00 0.00 4.61
3474 3880 2.752354 TGCTTATTGAAATGACGTGGGG 59.248 45.455 0.00 0.00 0.00 4.96
3479 3885 2.282887 AAATGACGTGGGGGTGGC 60.283 61.111 0.00 0.00 0.00 5.01
3484 3890 4.326227 ACGTGGGGGTGGCCTCTA 62.326 66.667 3.32 0.00 0.00 2.43
3485 3891 3.006728 CGTGGGGGTGGCCTCTAA 61.007 66.667 3.32 0.00 0.00 2.10
3486 3892 2.598787 CGTGGGGGTGGCCTCTAAA 61.599 63.158 3.32 0.00 0.00 1.85
3487 3893 1.771646 GTGGGGGTGGCCTCTAAAA 59.228 57.895 3.32 0.00 0.00 1.52
3488 3894 0.113580 GTGGGGGTGGCCTCTAAAAA 59.886 55.000 3.32 0.00 0.00 1.94
3522 3928 9.672086 TTTTCTTTTTGTTTGATGGTATCTACG 57.328 29.630 0.00 0.00 0.00 3.51
3523 3929 7.972832 TCTTTTTGTTTGATGGTATCTACGT 57.027 32.000 0.00 0.00 0.00 3.57
3524 3930 8.385898 TCTTTTTGTTTGATGGTATCTACGTT 57.614 30.769 0.00 0.00 0.00 3.99
3525 3931 8.842280 TCTTTTTGTTTGATGGTATCTACGTTT 58.158 29.630 0.00 0.00 0.00 3.60
3526 3932 9.113876 CTTTTTGTTTGATGGTATCTACGTTTC 57.886 33.333 0.00 0.00 0.00 2.78
3527 3933 6.397831 TTGTTTGATGGTATCTACGTTTCG 57.602 37.500 0.00 0.00 0.00 3.46
3528 3934 5.712004 TGTTTGATGGTATCTACGTTTCGA 58.288 37.500 0.00 0.00 0.00 3.71
3529 3935 6.157904 TGTTTGATGGTATCTACGTTTCGAA 58.842 36.000 0.00 0.00 0.00 3.71
3530 3936 6.645827 TGTTTGATGGTATCTACGTTTCGAAA 59.354 34.615 6.47 6.47 0.00 3.46
3531 3937 6.636666 TTGATGGTATCTACGTTTCGAAAC 57.363 37.500 27.37 27.37 35.59 2.78
3532 3938 5.957798 TGATGGTATCTACGTTTCGAAACT 58.042 37.500 31.88 22.63 36.77 2.66
3533 3939 6.392354 TGATGGTATCTACGTTTCGAAACTT 58.608 36.000 31.88 26.90 36.77 2.66
3534 3940 6.869913 TGATGGTATCTACGTTTCGAAACTTT 59.130 34.615 31.88 22.79 36.77 2.66
3535 3941 6.456447 TGGTATCTACGTTTCGAAACTTTG 57.544 37.500 31.88 24.90 36.77 2.77
3536 3942 5.406175 TGGTATCTACGTTTCGAAACTTTGG 59.594 40.000 31.88 22.12 36.77 3.28
3537 3943 3.865224 TCTACGTTTCGAAACTTTGGC 57.135 42.857 31.88 10.96 36.77 4.52
3538 3944 2.545106 TCTACGTTTCGAAACTTTGGCC 59.455 45.455 31.88 10.30 36.77 5.36
3539 3945 0.028374 ACGTTTCGAAACTTTGGCCG 59.972 50.000 31.88 21.77 36.77 6.13
3540 3946 1.266124 CGTTTCGAAACTTTGGCCGC 61.266 55.000 31.88 8.98 36.77 6.53
3541 3947 0.248702 GTTTCGAAACTTTGGCCGCA 60.249 50.000 29.27 0.00 36.03 5.69
3542 3948 0.671251 TTTCGAAACTTTGGCCGCAT 59.329 45.000 6.47 0.00 0.00 4.73
3543 3949 0.671251 TTCGAAACTTTGGCCGCATT 59.329 45.000 0.00 0.00 0.00 3.56
3544 3950 0.039617 TCGAAACTTTGGCCGCATTG 60.040 50.000 0.00 0.00 0.00 2.82
3545 3951 1.616872 CGAAACTTTGGCCGCATTGC 61.617 55.000 0.00 0.00 0.00 3.56
3546 3952 0.319813 GAAACTTTGGCCGCATTGCT 60.320 50.000 7.12 0.00 0.00 3.91
3547 3953 0.106521 AAACTTTGGCCGCATTGCTT 59.893 45.000 7.12 0.00 0.00 3.91
3548 3954 0.319813 AACTTTGGCCGCATTGCTTC 60.320 50.000 7.12 0.00 0.00 3.86
3549 3955 1.181098 ACTTTGGCCGCATTGCTTCT 61.181 50.000 7.12 0.00 0.00 2.85
3550 3956 0.810648 CTTTGGCCGCATTGCTTCTA 59.189 50.000 7.12 0.00 0.00 2.10
3551 3957 0.810648 TTTGGCCGCATTGCTTCTAG 59.189 50.000 7.12 0.00 0.00 2.43
3552 3958 0.322456 TTGGCCGCATTGCTTCTAGT 60.322 50.000 7.12 0.00 0.00 2.57
3553 3959 0.744414 TGGCCGCATTGCTTCTAGTC 60.744 55.000 7.12 0.00 0.00 2.59
3554 3960 1.440145 GGCCGCATTGCTTCTAGTCC 61.440 60.000 7.12 0.00 0.00 3.85
3555 3961 1.440145 GCCGCATTGCTTCTAGTCCC 61.440 60.000 7.12 0.00 0.00 4.46
3556 3962 0.815615 CCGCATTGCTTCTAGTCCCC 60.816 60.000 7.12 0.00 0.00 4.81
3557 3963 0.815615 CGCATTGCTTCTAGTCCCCC 60.816 60.000 7.12 0.00 0.00 5.40
3558 3964 0.815615 GCATTGCTTCTAGTCCCCCG 60.816 60.000 0.16 0.00 0.00 5.73
3559 3965 0.815615 CATTGCTTCTAGTCCCCCGC 60.816 60.000 0.00 0.00 0.00 6.13
3560 3966 0.983378 ATTGCTTCTAGTCCCCCGCT 60.983 55.000 0.00 0.00 0.00 5.52
3561 3967 1.614241 TTGCTTCTAGTCCCCCGCTC 61.614 60.000 0.00 0.00 0.00 5.03
3562 3968 1.758906 GCTTCTAGTCCCCCGCTCT 60.759 63.158 0.00 0.00 0.00 4.09
3563 3969 2.022240 GCTTCTAGTCCCCCGCTCTG 62.022 65.000 0.00 0.00 0.00 3.35
3564 3970 0.684805 CTTCTAGTCCCCCGCTCTGT 60.685 60.000 0.00 0.00 0.00 3.41
3565 3971 0.683504 TTCTAGTCCCCCGCTCTGTC 60.684 60.000 0.00 0.00 0.00 3.51
3566 3972 1.379977 CTAGTCCCCCGCTCTGTCA 60.380 63.158 0.00 0.00 0.00 3.58
3567 3973 0.757188 CTAGTCCCCCGCTCTGTCAT 60.757 60.000 0.00 0.00 0.00 3.06
3568 3974 1.043116 TAGTCCCCCGCTCTGTCATG 61.043 60.000 0.00 0.00 0.00 3.07
3569 3975 3.785859 TCCCCCGCTCTGTCATGC 61.786 66.667 0.00 0.00 0.00 4.06
3570 3976 4.100084 CCCCCGCTCTGTCATGCA 62.100 66.667 0.00 0.00 0.00 3.96
3571 3977 2.821366 CCCCGCTCTGTCATGCAC 60.821 66.667 0.00 0.00 0.00 4.57
3572 3978 2.046988 CCCGCTCTGTCATGCACA 60.047 61.111 0.00 0.00 0.00 4.57
3573 3979 2.393768 CCCGCTCTGTCATGCACAC 61.394 63.158 0.00 0.00 0.00 3.82
3574 3980 1.668793 CCGCTCTGTCATGCACACA 60.669 57.895 0.00 0.00 0.00 3.72
3575 3981 1.229975 CCGCTCTGTCATGCACACAA 61.230 55.000 0.00 0.00 0.00 3.33
3576 3982 0.800631 CGCTCTGTCATGCACACAAT 59.199 50.000 0.00 0.00 0.00 2.71
3577 3983 1.465187 CGCTCTGTCATGCACACAATG 60.465 52.381 0.00 0.00 0.00 2.82
3594 4000 4.695396 ACAATGCTTTCTTTTGTGATGCA 58.305 34.783 0.00 0.00 32.61 3.96
3595 4001 5.302360 ACAATGCTTTCTTTTGTGATGCAT 58.698 33.333 0.00 0.00 37.76 3.96
3596 4002 6.457355 ACAATGCTTTCTTTTGTGATGCATA 58.543 32.000 0.00 0.00 36.37 3.14
3597 4003 7.101054 ACAATGCTTTCTTTTGTGATGCATAT 58.899 30.769 0.00 0.00 36.37 1.78
3598 4004 7.064134 ACAATGCTTTCTTTTGTGATGCATATG 59.936 33.333 0.00 0.00 36.37 1.78
3599 4005 5.412640 TGCTTTCTTTTGTGATGCATATGG 58.587 37.500 0.00 0.00 0.00 2.74
3600 4006 4.807304 GCTTTCTTTTGTGATGCATATGGG 59.193 41.667 0.00 0.00 0.00 4.00
3601 4007 5.625197 GCTTTCTTTTGTGATGCATATGGGT 60.625 40.000 0.00 0.00 0.00 4.51
3602 4008 5.581126 TTCTTTTGTGATGCATATGGGTC 57.419 39.130 0.00 0.00 0.00 4.46
3603 4009 4.598022 TCTTTTGTGATGCATATGGGTCA 58.402 39.130 0.00 0.00 0.00 4.02
3604 4010 5.015515 TCTTTTGTGATGCATATGGGTCAA 58.984 37.500 0.00 0.00 0.00 3.18
3605 4011 5.479724 TCTTTTGTGATGCATATGGGTCAAA 59.520 36.000 0.00 3.13 0.00 2.69
3606 4012 5.936187 TTTGTGATGCATATGGGTCAAAT 57.064 34.783 0.00 0.00 0.00 2.32
3607 4013 4.922471 TGTGATGCATATGGGTCAAATG 57.078 40.909 0.00 0.00 0.00 2.32
3608 4014 4.279982 TGTGATGCATATGGGTCAAATGT 58.720 39.130 0.00 0.00 0.00 2.71
3633 4039 5.840243 TTCTTATCATTCTGCACCCATTG 57.160 39.130 0.00 0.00 0.00 2.82
3635 4041 4.883585 TCTTATCATTCTGCACCCATTGAC 59.116 41.667 0.00 0.00 0.00 3.18
3651 4057 6.777580 ACCCATTGACCCAATATTAGATTCAC 59.222 38.462 0.00 0.00 32.35 3.18
3707 4113 5.046520 TGAAGAGGAGGAAAGGCTTAAGTAC 60.047 44.000 0.00 0.00 0.00 2.73
3710 4116 3.195182 AGGAGGAAAGGCTTAAGTACGAC 59.805 47.826 0.00 0.00 0.00 4.34
3734 4140 1.526575 AACGCCAGGACCTGCAAATG 61.527 55.000 16.72 3.08 0.00 2.32
3743 4149 4.701651 CAGGACCTGCAAATGTTAGATGAA 59.298 41.667 8.99 0.00 0.00 2.57
3773 4179 5.124457 TGCAGAAACTGAAAAGATCATAGCC 59.876 40.000 2.81 0.00 37.44 3.93
3779 4185 5.426504 ACTGAAAAGATCATAGCCACTGAG 58.573 41.667 0.00 0.00 37.44 3.35
3928 4334 2.783135 TGCAGCTCTCCCTTAAAACAG 58.217 47.619 0.00 0.00 0.00 3.16
4026 4432 8.677300 AGCTACATGTTTATGTTACCTTGAATG 58.323 33.333 2.30 0.00 45.01 2.67
4032 4438 8.789881 TGTTTATGTTACCTTGAATGTTTTCG 57.210 30.769 0.00 0.00 34.39 3.46
4048 4454 9.232082 GAATGTTTTCGCATATGCAAATTAGTA 57.768 29.630 26.52 8.60 42.21 1.82
4095 4501 7.257003 CACTACCTTGCAATATTGTTAATGCA 58.743 34.615 16.61 5.39 41.37 3.96
4110 4516 6.941857 TGTTAATGCAAGTGAGGTGATAGTA 58.058 36.000 0.00 0.00 0.00 1.82
4117 4523 2.427453 AGTGAGGTGATAGTAAGGCACG 59.573 50.000 0.00 0.00 33.48 5.34
4176 4586 5.031066 TGTAGCACAAGGTTTCAGTAACT 57.969 39.130 0.00 0.00 36.93 2.24
4202 4612 4.734398 TGCTTTTGTTGTGTCAATCCTT 57.266 36.364 0.00 0.00 0.00 3.36
4258 4668 6.470235 GTCTTTTCCATTGCATGTTCTTATCG 59.530 38.462 0.00 0.00 0.00 2.92
4271 4681 7.803189 GCATGTTCTTATCGGGTTATATGTTTG 59.197 37.037 0.00 0.00 0.00 2.93
4305 4715 3.918294 TCATGCATCAGGATTCAGTCA 57.082 42.857 0.00 0.00 0.00 3.41
4317 4727 4.217118 AGGATTCAGTCATTTGTTCACAGC 59.783 41.667 0.00 0.00 0.00 4.40
4332 4743 5.126222 TGTTCACAGCTTTTTGTCCATGTAA 59.874 36.000 0.00 0.00 0.00 2.41
4459 4870 8.554528 GTCTGTGATATTGGAACTGATTGTATG 58.445 37.037 0.00 0.00 0.00 2.39
4568 4979 8.915057 AAAAACATAGACTCCATGATAGATGG 57.085 34.615 0.00 0.00 40.48 3.51
4584 4995 1.686052 GATGGTGCAAGGTTTGGTGAA 59.314 47.619 0.00 0.00 0.00 3.18
4658 5069 1.889829 CTGTTTTGCCGGATGGGTTAA 59.110 47.619 5.05 0.00 38.44 2.01
4679 5090 7.743400 GGTTAACGCTCAAAAGAACTATGTTAC 59.257 37.037 0.00 0.00 0.00 2.50
4761 5172 0.625849 TCCCTCCATTTTCTCCTGGC 59.374 55.000 0.00 0.00 32.30 4.85
4799 5210 6.092670 CCGCCCATCTTTGTGATATGTAATAG 59.907 42.308 0.00 0.00 33.36 1.73
4926 5337 1.897560 GGCAGGGTATGATGGCTAAC 58.102 55.000 0.00 0.00 38.83 2.34
4932 5343 3.527665 AGGGTATGATGGCTAACAAAGGT 59.472 43.478 0.00 0.00 0.00 3.50
4943 5354 2.899303 AACAAAGGTATGGACAGGGG 57.101 50.000 0.00 0.00 0.00 4.79
4968 5379 5.095145 TGAGAGTGATGGAAAAGGATGAG 57.905 43.478 0.00 0.00 0.00 2.90
4971 5382 3.618351 AGTGATGGAAAAGGATGAGCAG 58.382 45.455 0.00 0.00 0.00 4.24
4972 5383 2.686915 GTGATGGAAAAGGATGAGCAGG 59.313 50.000 0.00 0.00 0.00 4.85
4973 5384 1.680207 GATGGAAAAGGATGAGCAGGC 59.320 52.381 0.00 0.00 0.00 4.85
5058 5469 3.240606 CTTGTCCGCGCAGGTGTTG 62.241 63.158 8.75 0.00 41.99 3.33
5085 5496 2.683572 GGCCCCCAAGCCGAAAAT 60.684 61.111 0.00 0.00 44.57 1.82
5149 5560 0.036022 GACCTTCACTGCTGCTTCCT 59.964 55.000 0.00 0.00 0.00 3.36
5151 5562 1.018226 CCTTCACTGCTGCTTCCTCG 61.018 60.000 0.00 0.00 0.00 4.63
5166 5577 6.982852 TGCTTCCTCGAATACTTATAAGGAG 58.017 40.000 16.73 11.82 34.57 3.69
5181 5592 2.433318 GAGCTCAACCTTCGCGCT 60.433 61.111 9.40 0.00 0.00 5.92
5236 5647 1.993370 GCAGTAGTGTTCCGTAGCTTG 59.007 52.381 0.00 0.00 0.00 4.01
5313 5724 2.503356 ACTGACCCTGGTGATTCAGATC 59.497 50.000 14.99 0.00 38.19 2.75
5346 5758 2.114670 CATGGCCGTGGCTCGATTT 61.115 57.895 17.90 0.00 42.86 2.17
5375 5787 1.451067 GCTTTCAGCTGATGCACTCT 58.549 50.000 26.96 0.00 42.74 3.24
5455 5881 7.134815 CCTTGTTGAATTGAGAATAATAGGCG 58.865 38.462 0.00 0.00 0.00 5.52
5494 5920 1.972872 CCATCTGTTCAGGCCATACC 58.027 55.000 5.01 0.00 39.61 2.73
5497 5923 0.907704 TCTGTTCAGGCCATACCGGT 60.908 55.000 13.98 13.98 46.52 5.28
5530 5967 4.520492 GGAAACTGTGGTGTGAATCAAGAT 59.480 41.667 0.00 0.00 0.00 2.40
5572 6011 2.203238 TCAGCAGCACAGCAGCAA 60.203 55.556 9.01 0.00 43.44 3.91
5577 6016 2.599281 AGCACAGCAGCAATGGCA 60.599 55.556 0.00 0.00 44.61 4.92
5586 6025 1.001248 AGCAATGGCAGCCAATCCT 59.999 52.632 20.84 11.69 44.61 3.24
5599 6038 2.692041 GCCAATCCTTGAGCTAAGCAAT 59.308 45.455 0.00 0.00 34.96 3.56
5645 6084 1.001887 GGGGTTTCCATACACCGCA 60.002 57.895 0.79 0.00 43.80 5.69
5649 6088 0.027586 GTTTCCATACACCGCATCGC 59.972 55.000 0.00 0.00 0.00 4.58
5731 6176 1.079819 CCTGCTGAATCGTCGGTGT 60.080 57.895 0.00 0.00 32.14 4.16
5742 6187 3.557207 GTCGGTGTACAGACGTGTT 57.443 52.632 16.60 0.00 38.19 3.32
5743 6188 1.126079 GTCGGTGTACAGACGTGTTG 58.874 55.000 16.60 0.00 38.19 3.33
5763 6208 2.125106 GACATGGCGGTCCCTGAC 60.125 66.667 0.00 0.00 32.96 3.51
5794 6269 0.393673 TACAATGGGGCATGGTCACG 60.394 55.000 0.00 0.00 29.91 4.35
5799 6274 1.525995 GGGGCATGGTCACGTATGG 60.526 63.158 0.00 0.00 0.00 2.74
5806 6281 2.064581 GGTCACGTATGGGGAGCCT 61.065 63.158 0.00 0.00 0.00 4.58
5850 6339 3.305471 GGAGCGACTCTTTCAGTTGTAGT 60.305 47.826 6.78 0.00 38.67 2.73
5854 6343 7.154435 AGCGACTCTTTCAGTTGTAGTATTA 57.846 36.000 0.00 0.00 38.67 0.98
5986 6503 6.645790 AGAAGATATGATTGAATTGGTGCC 57.354 37.500 0.00 0.00 0.00 5.01
6022 6547 1.676006 GTTTTGTGTACAGCTGCTGGT 59.324 47.619 31.00 19.30 35.51 4.00
6035 6560 4.153117 CAGCTGCTGGTTAACTGAACTTAG 59.847 45.833 21.71 0.00 38.21 2.18
6037 6562 3.408634 TGCTGGTTAACTGAACTTAGCC 58.591 45.455 5.42 0.00 42.48 3.93
6038 6563 3.072476 TGCTGGTTAACTGAACTTAGCCT 59.928 43.478 5.42 0.00 42.48 4.58
6039 6564 3.437049 GCTGGTTAACTGAACTTAGCCTG 59.563 47.826 5.42 0.00 39.86 4.85
6040 6565 4.642429 CTGGTTAACTGAACTTAGCCTGT 58.358 43.478 5.42 0.00 38.21 4.00
6041 6566 5.043737 TGGTTAACTGAACTTAGCCTGTT 57.956 39.130 5.42 0.00 38.21 3.16
6042 6567 4.819630 TGGTTAACTGAACTTAGCCTGTTG 59.180 41.667 5.42 0.00 38.21 3.33
6043 6568 4.820173 GGTTAACTGAACTTAGCCTGTTGT 59.180 41.667 5.42 0.00 38.21 3.32
6044 6569 5.298527 GGTTAACTGAACTTAGCCTGTTGTT 59.701 40.000 5.42 0.00 38.21 2.83
6045 6570 6.183360 GGTTAACTGAACTTAGCCTGTTGTTT 60.183 38.462 5.42 0.00 38.21 2.83
6076 6617 1.933181 TGTCATATTTTCGCCGAGCTG 59.067 47.619 0.00 0.00 0.00 4.24
6102 6643 0.320771 GTGTGCCGTGTCTTCTGGAT 60.321 55.000 0.00 0.00 0.00 3.41
6119 6660 2.025605 TGGATCTGGATTTGCTGAAGCT 60.026 45.455 3.61 0.00 42.66 3.74
6159 6700 9.952030 CTACTGACTAATCTATCTGTCTATCCA 57.048 37.037 0.00 0.00 0.00 3.41
6166 6707 7.716799 AATCTATCTGTCTATCCATCCTGAC 57.283 40.000 0.00 0.00 0.00 3.51
6167 6708 6.206180 TCTATCTGTCTATCCATCCTGACA 57.794 41.667 0.00 0.00 37.76 3.58
6168 6709 6.798766 TCTATCTGTCTATCCATCCTGACAT 58.201 40.000 0.00 0.00 38.52 3.06
6169 6710 5.999205 ATCTGTCTATCCATCCTGACATC 57.001 43.478 0.00 0.00 38.52 3.06
6179 6754 1.319947 TCCTGACATCCCCTAGAGGT 58.680 55.000 0.00 0.00 43.64 3.85
6184 6759 1.019650 ACATCCCCTAGAGGTCTGGT 58.980 55.000 0.00 0.00 33.13 4.00
6185 6760 2.224077 ACATCCCCTAGAGGTCTGGTA 58.776 52.381 0.00 0.00 33.13 3.25
6240 6815 0.109086 AGCTTGACCGATCGTGTCAG 60.109 55.000 26.88 22.74 43.14 3.51
6241 6816 0.388649 GCTTGACCGATCGTGTCAGT 60.389 55.000 26.88 14.39 43.14 3.41
6242 6817 1.618861 CTTGACCGATCGTGTCAGTC 58.381 55.000 26.88 20.58 43.14 3.51
6243 6818 1.200252 CTTGACCGATCGTGTCAGTCT 59.800 52.381 26.88 2.05 43.14 3.24
6244 6819 0.803117 TGACCGATCGTGTCAGTCTC 59.197 55.000 25.65 8.72 37.80 3.36
6245 6820 1.088306 GACCGATCGTGTCAGTCTCT 58.912 55.000 23.34 0.00 32.56 3.10
6246 6821 1.062880 GACCGATCGTGTCAGTCTCTC 59.937 57.143 23.34 3.21 32.56 3.20
6247 6822 1.087501 CCGATCGTGTCAGTCTCTCA 58.912 55.000 15.09 0.00 0.00 3.27
6248 6823 1.202087 CCGATCGTGTCAGTCTCTCAC 60.202 57.143 15.09 0.00 0.00 3.51
6249 6824 1.464997 CGATCGTGTCAGTCTCTCACA 59.535 52.381 7.03 0.00 33.04 3.58
6250 6825 2.726373 CGATCGTGTCAGTCTCTCACAC 60.726 54.545 7.03 0.00 37.63 3.82
6251 6826 1.968704 TCGTGTCAGTCTCTCACACT 58.031 50.000 2.90 0.00 38.64 3.55
6252 6827 1.604278 TCGTGTCAGTCTCTCACACTG 59.396 52.381 2.90 0.00 42.40 3.66
6253 6828 1.335415 CGTGTCAGTCTCTCACACTGG 60.335 57.143 2.90 0.00 41.51 4.00
6254 6829 1.000283 GTGTCAGTCTCTCACACTGGG 60.000 57.143 0.18 0.00 41.51 4.45
6255 6830 1.333177 GTCAGTCTCTCACACTGGGT 58.667 55.000 0.18 0.00 41.51 4.51
6256 6831 2.158519 TGTCAGTCTCTCACACTGGGTA 60.159 50.000 0.18 0.00 41.51 3.69
6257 6832 3.093057 GTCAGTCTCTCACACTGGGTAT 58.907 50.000 0.18 0.00 41.51 2.73
6258 6833 3.129638 GTCAGTCTCTCACACTGGGTATC 59.870 52.174 0.18 0.00 41.51 2.24
6259 6834 2.098280 CAGTCTCTCACACTGGGTATCG 59.902 54.545 0.00 0.00 38.10 2.92
6260 6835 2.093106 GTCTCTCACACTGGGTATCGT 58.907 52.381 0.00 0.00 0.00 3.73
6261 6836 3.054582 AGTCTCTCACACTGGGTATCGTA 60.055 47.826 0.00 0.00 0.00 3.43
6262 6837 3.065095 GTCTCTCACACTGGGTATCGTAC 59.935 52.174 0.00 0.00 0.00 3.67
6263 6838 3.014623 CTCTCACACTGGGTATCGTACA 58.985 50.000 0.00 0.00 0.00 2.90
6264 6839 2.751259 TCTCACACTGGGTATCGTACAC 59.249 50.000 0.00 0.00 0.00 2.90
6265 6840 2.753452 CTCACACTGGGTATCGTACACT 59.247 50.000 0.00 0.00 31.94 3.55
6266 6841 2.490509 TCACACTGGGTATCGTACACTG 59.509 50.000 0.00 3.85 37.11 3.66
6267 6842 1.822990 ACACTGGGTATCGTACACTGG 59.177 52.381 0.00 1.79 35.60 4.00
6268 6843 0.822164 ACTGGGTATCGTACACTGGC 59.178 55.000 0.00 0.00 35.60 4.85
6269 6844 1.112113 CTGGGTATCGTACACTGGCT 58.888 55.000 0.00 0.00 31.94 4.75
6270 6845 2.304092 CTGGGTATCGTACACTGGCTA 58.696 52.381 0.00 0.00 31.94 3.93
6271 6846 2.026641 TGGGTATCGTACACTGGCTAC 58.973 52.381 0.00 0.00 31.94 3.58
6272 6847 2.305009 GGGTATCGTACACTGGCTACT 58.695 52.381 0.00 0.00 0.00 2.57
6273 6848 2.034305 GGGTATCGTACACTGGCTACTG 59.966 54.545 0.00 0.00 0.00 2.74
6274 6849 2.543238 GGTATCGTACACTGGCTACTGC 60.543 54.545 0.00 0.00 38.76 4.40
6275 6850 1.475403 ATCGTACACTGGCTACTGCT 58.525 50.000 0.00 0.00 39.59 4.24
6276 6851 0.526211 TCGTACACTGGCTACTGCTG 59.474 55.000 0.00 0.00 39.59 4.41
6277 6852 1.078759 CGTACACTGGCTACTGCTGC 61.079 60.000 0.00 0.00 39.59 5.25
6278 6853 0.247736 GTACACTGGCTACTGCTGCT 59.752 55.000 0.00 0.00 39.59 4.24
6279 6854 0.247460 TACACTGGCTACTGCTGCTG 59.753 55.000 4.89 4.89 39.59 4.41
6280 6855 1.294459 CACTGGCTACTGCTGCTGA 59.706 57.895 13.69 0.00 39.59 4.26
6281 6856 0.321034 CACTGGCTACTGCTGCTGAA 60.321 55.000 13.69 0.00 39.59 3.02
6282 6857 0.321122 ACTGGCTACTGCTGCTGAAC 60.321 55.000 13.69 2.14 39.59 3.18
6283 6858 0.321034 CTGGCTACTGCTGCTGAACA 60.321 55.000 13.69 5.53 39.59 3.18
6284 6859 0.325933 TGGCTACTGCTGCTGAACAT 59.674 50.000 13.69 0.00 39.59 2.71
6285 6860 0.731417 GGCTACTGCTGCTGAACATG 59.269 55.000 13.69 0.00 39.59 3.21
6286 6861 0.731417 GCTACTGCTGCTGAACATGG 59.269 55.000 13.69 0.00 36.03 3.66
6287 6862 0.731417 CTACTGCTGCTGAACATGGC 59.269 55.000 13.69 0.00 0.00 4.40
6288 6863 0.677731 TACTGCTGCTGAACATGGCC 60.678 55.000 13.69 0.00 0.00 5.36
6289 6864 3.047718 CTGCTGCTGAACATGGCCG 62.048 63.158 0.00 0.00 0.00 6.13
6290 6865 2.747460 GCTGCTGAACATGGCCGA 60.747 61.111 0.00 0.00 0.00 5.54
6291 6866 3.044059 GCTGCTGAACATGGCCGAC 62.044 63.158 0.00 0.00 0.00 4.79
6292 6867 1.376424 CTGCTGAACATGGCCGACT 60.376 57.895 0.00 0.00 0.00 4.18
6293 6868 1.364626 CTGCTGAACATGGCCGACTC 61.365 60.000 0.00 0.00 0.00 3.36
6294 6869 2.109126 GCTGAACATGGCCGACTCC 61.109 63.158 0.00 0.00 0.00 3.85
6295 6870 1.296392 CTGAACATGGCCGACTCCA 59.704 57.895 0.00 0.00 40.97 3.86
6296 6871 1.003839 TGAACATGGCCGACTCCAC 60.004 57.895 0.00 0.00 39.25 4.02
6297 6872 2.047274 AACATGGCCGACTCCACG 60.047 61.111 0.00 0.00 39.25 4.94
6298 6873 2.501223 GAACATGGCCGACTCCACGA 62.501 60.000 0.00 0.00 39.25 4.35
6299 6874 1.899437 AACATGGCCGACTCCACGAT 61.899 55.000 0.00 0.00 39.25 3.73
6300 6875 1.153369 CATGGCCGACTCCACGATT 60.153 57.895 0.00 0.00 39.25 3.34
6301 6876 1.144057 ATGGCCGACTCCACGATTC 59.856 57.895 0.00 0.00 39.25 2.52
6302 6877 1.613317 ATGGCCGACTCCACGATTCA 61.613 55.000 0.00 0.00 39.25 2.57
6303 6878 1.144057 GGCCGACTCCACGATTCAT 59.856 57.895 0.00 0.00 35.09 2.57
6304 6879 0.462047 GGCCGACTCCACGATTCATT 60.462 55.000 0.00 0.00 35.09 2.57
6305 6880 1.369625 GCCGACTCCACGATTCATTT 58.630 50.000 0.00 0.00 35.09 2.32
6306 6881 1.737793 GCCGACTCCACGATTCATTTT 59.262 47.619 0.00 0.00 35.09 1.82
6307 6882 2.223044 GCCGACTCCACGATTCATTTTC 60.223 50.000 0.00 0.00 35.09 2.29
6308 6883 3.000041 CCGACTCCACGATTCATTTTCA 59.000 45.455 0.00 0.00 35.09 2.69
6309 6884 3.181520 CCGACTCCACGATTCATTTTCAC 60.182 47.826 0.00 0.00 35.09 3.18
6310 6885 3.481951 CGACTCCACGATTCATTTTCACG 60.482 47.826 0.00 0.00 35.09 4.35
6311 6886 2.159627 ACTCCACGATTCATTTTCACGC 59.840 45.455 0.00 0.00 0.00 5.34
6312 6887 2.147150 TCCACGATTCATTTTCACGCA 58.853 42.857 0.00 0.00 0.00 5.24
6313 6888 2.550180 TCCACGATTCATTTTCACGCAA 59.450 40.909 0.00 0.00 0.00 4.85
6314 6889 2.656422 CCACGATTCATTTTCACGCAAC 59.344 45.455 0.00 0.00 0.00 4.17
6315 6890 2.335320 CACGATTCATTTTCACGCAACG 59.665 45.455 0.00 0.00 0.00 4.10
6316 6891 1.904412 CGATTCATTTTCACGCAACGG 59.096 47.619 0.00 0.00 0.00 4.44
6317 6892 2.250188 GATTCATTTTCACGCAACGGG 58.750 47.619 0.00 0.00 0.00 5.28
6318 6893 1.025812 TTCATTTTCACGCAACGGGT 58.974 45.000 0.00 0.00 0.00 5.28
6319 6894 0.309302 TCATTTTCACGCAACGGGTG 59.691 50.000 4.92 4.92 45.77 4.61
6320 6895 0.030101 CATTTTCACGCAACGGGTGT 59.970 50.000 10.47 0.00 44.89 4.16
6326 6901 2.029964 CGCAACGGGTGTGTACCT 59.970 61.111 0.00 0.00 46.66 3.08
6331 6906 4.904466 CGGGTGTGTACCTGTAGC 57.096 61.111 0.00 0.00 46.44 3.58
6332 6907 1.969085 CGGGTGTGTACCTGTAGCA 59.031 57.895 0.00 0.00 46.44 3.49
6333 6908 0.108804 CGGGTGTGTACCTGTAGCAG 60.109 60.000 0.00 0.00 46.44 4.24
6334 6909 0.391263 GGGTGTGTACCTGTAGCAGC 60.391 60.000 0.00 0.00 46.66 5.25
6335 6910 0.391263 GGTGTGTACCTGTAGCAGCC 60.391 60.000 0.00 0.00 43.97 4.85
6336 6911 0.608640 GTGTGTACCTGTAGCAGCCT 59.391 55.000 0.00 0.00 0.00 4.58
6337 6912 1.822990 GTGTGTACCTGTAGCAGCCTA 59.177 52.381 0.00 0.00 0.00 3.93
6338 6913 1.822990 TGTGTACCTGTAGCAGCCTAC 59.177 52.381 0.00 0.00 43.43 3.18
6339 6914 2.100989 GTGTACCTGTAGCAGCCTACT 58.899 52.381 0.00 0.00 43.51 2.57
6348 6923 2.437359 CAGCCTACTGCCAGCACC 60.437 66.667 0.00 0.00 42.71 5.01
6349 6924 3.721706 AGCCTACTGCCAGCACCC 61.722 66.667 0.00 0.00 42.71 4.61
6351 6926 3.390521 CCTACTGCCAGCACCCGA 61.391 66.667 0.00 0.00 0.00 5.14
6352 6927 2.735772 CCTACTGCCAGCACCCGAT 61.736 63.158 0.00 0.00 0.00 4.18
6353 6928 1.227380 CTACTGCCAGCACCCGATC 60.227 63.158 0.00 0.00 0.00 3.69
6354 6929 1.960040 CTACTGCCAGCACCCGATCA 61.960 60.000 0.00 0.00 0.00 2.92
6355 6930 2.238847 TACTGCCAGCACCCGATCAC 62.239 60.000 0.00 0.00 0.00 3.06
6356 6931 3.320879 CTGCCAGCACCCGATCACT 62.321 63.158 0.00 0.00 0.00 3.41
6357 6932 2.821366 GCCAGCACCCGATCACTG 60.821 66.667 0.00 0.00 0.00 3.66
6358 6933 2.124983 CCAGCACCCGATCACTGG 60.125 66.667 0.00 0.00 43.45 4.00
6359 6934 2.665000 CAGCACCCGATCACTGGT 59.335 61.111 0.00 0.00 34.00 4.00
6360 6935 1.448540 CAGCACCCGATCACTGGTC 60.449 63.158 0.00 0.00 31.40 4.02
6361 6936 2.125106 GCACCCGATCACTGGTCC 60.125 66.667 0.00 0.00 31.40 4.46
6362 6937 2.954684 GCACCCGATCACTGGTCCA 61.955 63.158 0.00 0.00 31.40 4.02
6363 6938 1.219124 CACCCGATCACTGGTCCAG 59.781 63.158 17.88 17.88 37.52 3.86
6364 6939 2.187946 CCCGATCACTGGTCCAGC 59.812 66.667 19.40 1.35 34.37 4.85
6365 6940 2.659063 CCCGATCACTGGTCCAGCA 61.659 63.158 19.40 6.18 34.37 4.41
6366 6941 1.524002 CCGATCACTGGTCCAGCAT 59.476 57.895 19.40 11.06 34.37 3.79
6367 6942 0.812811 CCGATCACTGGTCCAGCATG 60.813 60.000 19.40 10.81 34.37 4.06
6368 6943 1.434622 CGATCACTGGTCCAGCATGC 61.435 60.000 19.40 10.51 34.37 4.06
6369 6944 0.393402 GATCACTGGTCCAGCATGCA 60.393 55.000 21.98 0.00 34.37 3.96
6370 6945 0.257905 ATCACTGGTCCAGCATGCAT 59.742 50.000 21.98 1.69 34.37 3.96
6371 6946 0.678684 TCACTGGTCCAGCATGCATG 60.679 55.000 22.70 22.70 34.37 4.06
6398 6973 2.945447 GCATAAGCAAGCACCATTGA 57.055 45.000 0.00 0.00 41.58 2.57
6399 6974 3.447918 GCATAAGCAAGCACCATTGAT 57.552 42.857 0.00 0.00 41.58 2.57
6400 6975 3.378339 GCATAAGCAAGCACCATTGATC 58.622 45.455 0.00 0.00 41.58 2.92
6401 6976 3.624900 CATAAGCAAGCACCATTGATCG 58.375 45.455 0.00 0.00 31.55 3.69
6402 6977 0.171903 AAGCAAGCACCATTGATCGC 59.828 50.000 0.00 0.00 31.55 4.58
6403 6978 1.226773 GCAAGCACCATTGATCGCC 60.227 57.895 0.00 0.00 31.55 5.54
6404 6979 1.660560 GCAAGCACCATTGATCGCCT 61.661 55.000 0.00 0.00 31.55 5.52
6405 6980 0.099968 CAAGCACCATTGATCGCCTG 59.900 55.000 0.00 0.00 31.55 4.85
6406 6981 0.035152 AAGCACCATTGATCGCCTGA 60.035 50.000 0.00 0.00 0.00 3.86
6407 6982 0.035152 AGCACCATTGATCGCCTGAA 60.035 50.000 0.00 0.00 0.00 3.02
6408 6983 0.810648 GCACCATTGATCGCCTGAAA 59.189 50.000 0.00 0.00 0.00 2.69
6409 6984 1.202114 GCACCATTGATCGCCTGAAAA 59.798 47.619 0.00 0.00 0.00 2.29
6410 6985 2.159198 GCACCATTGATCGCCTGAAAAT 60.159 45.455 0.00 0.00 0.00 1.82
6411 6986 3.699067 CACCATTGATCGCCTGAAAATC 58.301 45.455 0.00 0.00 0.00 2.17
6412 6987 3.379372 CACCATTGATCGCCTGAAAATCT 59.621 43.478 0.00 0.00 0.00 2.40
6413 6988 4.019174 ACCATTGATCGCCTGAAAATCTT 58.981 39.130 0.00 0.00 0.00 2.40
6414 6989 4.463891 ACCATTGATCGCCTGAAAATCTTT 59.536 37.500 0.00 0.00 0.00 2.52
6415 6990 5.047092 ACCATTGATCGCCTGAAAATCTTTT 60.047 36.000 0.00 0.00 0.00 2.27
6416 6991 5.870978 CCATTGATCGCCTGAAAATCTTTTT 59.129 36.000 0.00 0.00 0.00 1.94
6417 6992 7.035004 CCATTGATCGCCTGAAAATCTTTTTA 58.965 34.615 0.00 0.00 0.00 1.52
6418 6993 7.009540 CCATTGATCGCCTGAAAATCTTTTTAC 59.990 37.037 0.00 0.00 0.00 2.01
6419 6994 6.817765 TGATCGCCTGAAAATCTTTTTACT 57.182 33.333 0.00 0.00 0.00 2.24
6420 6995 7.915293 TGATCGCCTGAAAATCTTTTTACTA 57.085 32.000 0.00 0.00 0.00 1.82
6421 6996 8.506168 TGATCGCCTGAAAATCTTTTTACTAT 57.494 30.769 0.00 0.00 0.00 2.12
6422 6997 8.612619 TGATCGCCTGAAAATCTTTTTACTATC 58.387 33.333 0.00 0.00 0.00 2.08
6423 6998 7.915293 TCGCCTGAAAATCTTTTTACTATCA 57.085 32.000 0.00 0.00 0.00 2.15
6424 6999 8.506168 TCGCCTGAAAATCTTTTTACTATCAT 57.494 30.769 0.00 0.00 0.00 2.45
6425 7000 8.397906 TCGCCTGAAAATCTTTTTACTATCATG 58.602 33.333 0.00 0.00 0.00 3.07
6426 7001 7.166473 CGCCTGAAAATCTTTTTACTATCATGC 59.834 37.037 0.00 0.00 0.00 4.06
6427 7002 7.975616 GCCTGAAAATCTTTTTACTATCATGCA 59.024 33.333 0.00 0.00 28.38 3.96
6428 7003 9.294030 CCTGAAAATCTTTTTACTATCATGCAC 57.706 33.333 0.00 0.00 0.00 4.57
6429 7004 8.894409 TGAAAATCTTTTTACTATCATGCACG 57.106 30.769 0.00 0.00 0.00 5.34
6430 7005 7.484641 TGAAAATCTTTTTACTATCATGCACGC 59.515 33.333 0.00 0.00 0.00 5.34
6431 7006 4.875544 TCTTTTTACTATCATGCACGCC 57.124 40.909 0.00 0.00 0.00 5.68
6432 7007 4.257731 TCTTTTTACTATCATGCACGCCA 58.742 39.130 0.00 0.00 0.00 5.69
6433 7008 4.697828 TCTTTTTACTATCATGCACGCCAA 59.302 37.500 0.00 0.00 0.00 4.52
6434 7009 5.182190 TCTTTTTACTATCATGCACGCCAAA 59.818 36.000 0.00 0.00 0.00 3.28
6435 7010 5.378292 TTTTACTATCATGCACGCCAAAA 57.622 34.783 0.00 0.00 0.00 2.44
6436 7011 5.378292 TTTACTATCATGCACGCCAAAAA 57.622 34.783 0.00 0.00 0.00 1.94
6437 7012 5.574891 TTACTATCATGCACGCCAAAAAT 57.425 34.783 0.00 0.00 0.00 1.82
6438 7013 6.685527 TTACTATCATGCACGCCAAAAATA 57.314 33.333 0.00 0.00 0.00 1.40
6439 7014 4.920376 ACTATCATGCACGCCAAAAATAC 58.080 39.130 0.00 0.00 0.00 1.89
6440 7015 2.645730 TCATGCACGCCAAAAATACC 57.354 45.000 0.00 0.00 0.00 2.73
6441 7016 1.889170 TCATGCACGCCAAAAATACCA 59.111 42.857 0.00 0.00 0.00 3.25
6442 7017 2.495270 TCATGCACGCCAAAAATACCAT 59.505 40.909 0.00 0.00 0.00 3.55
6443 7018 3.056250 TCATGCACGCCAAAAATACCATT 60.056 39.130 0.00 0.00 0.00 3.16
6444 7019 3.393089 TGCACGCCAAAAATACCATTT 57.607 38.095 0.00 0.00 0.00 2.32
6445 7020 3.062763 TGCACGCCAAAAATACCATTTG 58.937 40.909 0.00 0.00 37.48 2.32
6454 7029 5.447573 CAAAAATACCATTTGGCAAAACCG 58.552 37.500 17.70 9.48 43.94 4.44
6455 7030 4.344359 AAATACCATTTGGCAAAACCGT 57.656 36.364 17.70 14.56 43.94 4.83
6456 7031 2.802787 TACCATTTGGCAAAACCGTG 57.197 45.000 17.70 10.35 43.94 4.94
6457 7032 0.531753 ACCATTTGGCAAAACCGTGC 60.532 50.000 17.70 0.00 43.94 5.34
6458 7033 0.531532 CCATTTGGCAAAACCGTGCA 60.532 50.000 17.70 0.00 46.81 4.57
6459 7034 1.510776 CATTTGGCAAAACCGTGCAT 58.489 45.000 17.70 0.00 46.81 3.96
6460 7035 1.460359 CATTTGGCAAAACCGTGCATC 59.540 47.619 17.70 0.00 46.81 3.91
6461 7036 0.596083 TTTGGCAAAACCGTGCATCG 60.596 50.000 10.83 0.00 46.81 3.84
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.478394 CGACGTGGCATGTCACCG 61.478 66.667 32.46 18.35 33.83 4.94
19 20 3.788766 GGCGACGTGGCATGTCAC 61.789 66.667 32.46 25.37 44.08 3.67
41 42 2.907897 TTTGTTTGTTTGGGCGGCGG 62.908 55.000 9.78 0.00 0.00 6.13
42 43 1.519455 TTTGTTTGTTTGGGCGGCG 60.519 52.632 0.51 0.51 0.00 6.46
44 45 2.017138 AAGTTTGTTTGTTTGGGCGG 57.983 45.000 0.00 0.00 0.00 6.13
45 46 2.095053 CCAAAGTTTGTTTGTTTGGGCG 59.905 45.455 14.36 0.00 44.40 6.13
46 47 3.339141 TCCAAAGTTTGTTTGTTTGGGC 58.661 40.909 14.36 0.00 46.92 5.36
47 48 3.373748 GCTCCAAAGTTTGTTTGTTTGGG 59.626 43.478 14.36 0.00 46.92 4.12
49 50 6.959671 TTAGCTCCAAAGTTTGTTTGTTTG 57.040 33.333 14.36 0.00 0.00 2.93
50 51 9.093970 GTAATTAGCTCCAAAGTTTGTTTGTTT 57.906 29.630 14.36 2.74 0.00 2.83
51 52 7.434013 CGTAATTAGCTCCAAAGTTTGTTTGTT 59.566 33.333 14.36 4.96 0.00 2.83
52 53 6.915843 CGTAATTAGCTCCAAAGTTTGTTTGT 59.084 34.615 14.36 0.00 0.00 2.83
77 78 5.086104 TCTCTCTATTGTTTGCCAGGTAC 57.914 43.478 0.00 0.00 0.00 3.34
93 99 9.383519 CGCTCTTTATAATCTCTCTATCTCTCT 57.616 37.037 0.00 0.00 0.00 3.10
96 102 7.201785 CCCCGCTCTTTATAATCTCTCTATCTC 60.202 44.444 0.00 0.00 0.00 2.75
97 103 6.605594 CCCCGCTCTTTATAATCTCTCTATCT 59.394 42.308 0.00 0.00 0.00 1.98
98 104 6.183360 CCCCCGCTCTTTATAATCTCTCTATC 60.183 46.154 0.00 0.00 0.00 2.08
99 105 5.659079 CCCCCGCTCTTTATAATCTCTCTAT 59.341 44.000 0.00 0.00 0.00 1.98
100 106 5.017490 CCCCCGCTCTTTATAATCTCTCTA 58.983 45.833 0.00 0.00 0.00 2.43
139 148 2.463497 TTATTTGGGTGGGGGTGCCC 62.463 60.000 0.00 0.00 44.51 5.36
257 269 2.123033 GGGGAGGGAGGAGAGAGC 60.123 72.222 0.00 0.00 0.00 4.09
273 295 2.567049 GACGACGGTGAGGACTGG 59.433 66.667 0.00 0.00 32.03 4.00
276 298 2.175322 GACGACGACGGTGAGGAC 59.825 66.667 12.58 0.00 44.46 3.85
277 299 3.417224 CGACGACGACGGTGAGGA 61.417 66.667 12.58 0.00 44.46 3.71
278 300 3.417224 TCGACGACGACGGTGAGG 61.417 66.667 18.73 0.00 43.81 3.86
338 361 0.315886 CGGTTTTACCCAAGCCCAAC 59.684 55.000 0.00 0.00 33.75 3.77
344 367 2.262303 TGCGGCGGTTTTACCCAAG 61.262 57.895 9.78 0.00 33.75 3.61
390 413 3.037715 GGGGGATGGAGAGAGGGA 58.962 66.667 0.00 0.00 0.00 4.20
391 414 2.393710 ATCGGGGGATGGAGAGAGGG 62.394 65.000 0.00 0.00 0.00 4.30
392 415 1.157276 ATCGGGGGATGGAGAGAGG 59.843 63.158 0.00 0.00 0.00 3.69
393 416 1.825281 GCATCGGGGGATGGAGAGAG 61.825 65.000 6.25 0.00 33.41 3.20
394 417 1.838846 GCATCGGGGGATGGAGAGA 60.839 63.158 6.25 0.00 33.41 3.10
395 418 2.746359 GCATCGGGGGATGGAGAG 59.254 66.667 6.25 0.00 33.41 3.20
396 419 2.849162 GGCATCGGGGGATGGAGA 60.849 66.667 6.25 0.00 33.41 3.71
690 947 2.284405 GGAGGACGGAAGGGTGGA 60.284 66.667 0.00 0.00 0.00 4.02
713 970 0.405973 GGCAGGGGAGAAAGGAAAGT 59.594 55.000 0.00 0.00 0.00 2.66
720 977 3.717294 GCCGAGGCAGGGGAGAAA 61.717 66.667 9.58 0.00 41.49 2.52
786 1043 2.515523 CCAAGCGGATGGAGCAGG 60.516 66.667 0.43 0.00 43.54 4.85
788 1045 2.424842 AAACCCAAGCGGATGGAGCA 62.425 55.000 7.68 0.00 43.54 4.26
789 1046 1.250840 AAAACCCAAGCGGATGGAGC 61.251 55.000 7.68 0.00 43.54 4.70
790 1047 1.202348 GAAAAACCCAAGCGGATGGAG 59.798 52.381 7.68 1.74 43.54 3.86
791 1048 1.253100 GAAAAACCCAAGCGGATGGA 58.747 50.000 7.68 0.00 43.54 3.41
792 1049 0.965439 TGAAAAACCCAAGCGGATGG 59.035 50.000 0.00 0.00 40.35 3.51
897 1172 2.897350 GCGAGGCCGGGAATCTTG 60.897 66.667 2.18 0.00 36.06 3.02
934 1209 2.365768 GGTGGAGGAGGAGGGGAC 60.366 72.222 0.00 0.00 0.00 4.46
936 1211 2.041405 GAGGTGGAGGAGGAGGGG 60.041 72.222 0.00 0.00 0.00 4.79
937 1212 2.041405 GGAGGTGGAGGAGGAGGG 60.041 72.222 0.00 0.00 0.00 4.30
1044 1339 2.673523 CCCTTGGGTCAGAGGCTG 59.326 66.667 0.00 0.00 0.00 4.85
1045 1340 2.612115 CCCCTTGGGTCAGAGGCT 60.612 66.667 4.84 0.00 38.25 4.58
1056 1351 5.478332 AGCTGAAGTCTTTTAATTCCCCTTG 59.522 40.000 0.00 0.00 0.00 3.61
1066 1361 3.864921 GCCTCGGAAGCTGAAGTCTTTTA 60.865 47.826 0.00 0.00 0.00 1.52
1077 1372 2.057408 CAGAGGAGCCTCGGAAGCT 61.057 63.158 10.65 0.00 46.90 3.74
1082 1377 3.535962 GGAGCAGAGGAGCCTCGG 61.536 72.222 11.65 11.65 46.90 4.63
1380 1677 2.188469 GAGGCGATTGCGGGGTTA 59.812 61.111 0.00 0.00 44.10 2.85
1470 1767 2.203669 TCCCCGTCGGAGTGGAAA 60.204 61.111 14.39 0.00 34.86 3.13
1497 1794 0.994247 ACTTGATGTGGCCATCCTCA 59.006 50.000 9.72 9.86 45.78 3.86
1503 1800 3.034924 GTGGAACTTGATGTGGCCA 57.965 52.632 0.00 0.00 33.38 5.36
1778 2075 0.392706 CATGCTGCTGTATCCCGGTA 59.607 55.000 0.00 0.00 0.00 4.02
1863 2160 4.712476 AGTTCATGTTGAAGAAGCTCTGT 58.288 39.130 0.00 0.00 37.00 3.41
2013 2310 2.203224 TCCGGCCGTTGCTCAAAA 60.203 55.556 26.12 0.00 37.74 2.44
2037 2334 2.959275 GGTCTGAACCGTAGCATCG 58.041 57.895 0.00 0.00 35.36 3.84
2063 2360 2.661866 CCCGCGCATAGCTGGTAC 60.662 66.667 8.75 0.00 44.11 3.34
2235 2532 1.907807 ACCGCCGTAGTAACCACCA 60.908 57.895 0.00 0.00 0.00 4.17
2508 2805 0.948623 TCAACGGGTGCTTGTCATCG 60.949 55.000 0.00 0.00 0.00 3.84
2614 2911 1.405661 GCTCCCACTACTACTTGGCAC 60.406 57.143 0.00 0.00 0.00 5.01
2737 3049 1.741706 GAGCACCACCTCATTGTCATG 59.258 52.381 0.00 0.00 0.00 3.07
2796 3108 1.811266 CATCTTGGACACCTCGCCG 60.811 63.158 0.00 0.00 0.00 6.46
2799 3111 1.081892 CAAGCATCTTGGACACCTCG 58.918 55.000 0.00 0.00 0.00 4.63
2976 3288 2.560542 CCATTGTCGGAATCCCACAAAA 59.439 45.455 15.96 0.00 37.18 2.44
2987 3299 0.041238 ACTCCTCCTCCATTGTCGGA 59.959 55.000 0.00 0.00 0.00 4.55
3017 3329 0.250234 CCATCGCCTTGTCCTCTTCA 59.750 55.000 0.00 0.00 0.00 3.02
3062 3374 6.071616 TCCTTTCCCACATGTATAGTTTTTGC 60.072 38.462 0.00 0.00 0.00 3.68
3065 3377 6.152831 GCTTCCTTTCCCACATGTATAGTTTT 59.847 38.462 0.00 0.00 0.00 2.43
3142 3454 1.001974 TCCCGACTCACAATGTTCCTG 59.998 52.381 0.00 0.00 0.00 3.86
3191 3503 8.594881 ACTCTGTAGTCTAAATTTTCACACTG 57.405 34.615 0.00 0.85 0.00 3.66
3207 3542 6.151312 CACATACTGTACTTGGACTCTGTAGT 59.849 42.308 0.00 0.00 39.21 2.73
3208 3543 6.374613 TCACATACTGTACTTGGACTCTGTAG 59.625 42.308 0.00 0.00 0.00 2.74
3218 3553 6.422701 TCCGAAACTTTCACATACTGTACTTG 59.577 38.462 2.49 0.00 0.00 3.16
3240 3575 7.115520 CAGTAGCATAGACAATAGACAAATCCG 59.884 40.741 0.00 0.00 0.00 4.18
3282 3617 6.667848 CCCCTTACAAAATAAGATGGAAACCT 59.332 38.462 0.00 0.00 0.00 3.50
3283 3618 6.439375 ACCCCTTACAAAATAAGATGGAAACC 59.561 38.462 8.37 0.00 0.00 3.27
3300 3635 5.268118 ACTAAATACGTGCTACCCCTTAC 57.732 43.478 0.00 0.00 0.00 2.34
3317 3652 6.687958 GCGTAATTTTAGCCGCAATAACTAAA 59.312 34.615 0.00 0.00 45.12 1.85
3329 3670 6.300354 AGTACATGATGCGTAATTTTAGCC 57.700 37.500 0.00 0.00 0.00 3.93
3340 3681 6.887376 AGTAACAGTTAAGTACATGATGCG 57.113 37.500 0.00 0.00 0.00 4.73
3375 3781 9.234827 TGGACCTCATTCATAGCATATTTATTG 57.765 33.333 0.00 0.00 0.00 1.90
3440 3846 7.945033 TTTCAATAAGCATCAAAGAACCAAC 57.055 32.000 0.00 0.00 0.00 3.77
3447 3853 6.252015 CCACGTCATTTCAATAAGCATCAAAG 59.748 38.462 0.00 0.00 0.00 2.77
3448 3854 6.092092 CCACGTCATTTCAATAAGCATCAAA 58.908 36.000 0.00 0.00 0.00 2.69
3449 3855 5.392919 CCCACGTCATTTCAATAAGCATCAA 60.393 40.000 0.00 0.00 0.00 2.57
3450 3856 4.096231 CCCACGTCATTTCAATAAGCATCA 59.904 41.667 0.00 0.00 0.00 3.07
3454 3860 2.099098 CCCCCACGTCATTTCAATAAGC 59.901 50.000 0.00 0.00 0.00 3.09
3457 3863 2.619332 CCACCCCCACGTCATTTCAATA 60.619 50.000 0.00 0.00 0.00 1.90
3468 3874 2.132089 TTTTAGAGGCCACCCCCACG 62.132 60.000 5.01 0.00 0.00 4.94
3496 3902 9.672086 CGTAGATACCATCAAACAAAAAGAAAA 57.328 29.630 0.00 0.00 0.00 2.29
3497 3903 8.842280 ACGTAGATACCATCAAACAAAAAGAAA 58.158 29.630 0.00 0.00 0.00 2.52
3498 3904 8.385898 ACGTAGATACCATCAAACAAAAAGAA 57.614 30.769 0.00 0.00 0.00 2.52
3499 3905 7.972832 ACGTAGATACCATCAAACAAAAAGA 57.027 32.000 0.00 0.00 0.00 2.52
3500 3906 9.113876 GAAACGTAGATACCATCAAACAAAAAG 57.886 33.333 0.00 0.00 0.00 2.27
3501 3907 7.799447 CGAAACGTAGATACCATCAAACAAAAA 59.201 33.333 0.00 0.00 0.00 1.94
3502 3908 7.171167 TCGAAACGTAGATACCATCAAACAAAA 59.829 33.333 0.00 0.00 0.00 2.44
3503 3909 6.645827 TCGAAACGTAGATACCATCAAACAAA 59.354 34.615 0.00 0.00 0.00 2.83
3504 3910 6.157904 TCGAAACGTAGATACCATCAAACAA 58.842 36.000 0.00 0.00 0.00 2.83
3505 3911 5.712004 TCGAAACGTAGATACCATCAAACA 58.288 37.500 0.00 0.00 0.00 2.83
3506 3912 6.636666 TTCGAAACGTAGATACCATCAAAC 57.363 37.500 0.00 0.00 0.00 2.93
3507 3913 6.869913 AGTTTCGAAACGTAGATACCATCAAA 59.130 34.615 29.72 0.00 43.51 2.69
3508 3914 6.392354 AGTTTCGAAACGTAGATACCATCAA 58.608 36.000 29.72 0.00 43.51 2.57
3509 3915 5.957798 AGTTTCGAAACGTAGATACCATCA 58.042 37.500 29.72 0.00 43.51 3.07
3510 3916 6.882458 AAGTTTCGAAACGTAGATACCATC 57.118 37.500 29.72 6.76 43.51 3.51
3511 3917 6.091713 CCAAAGTTTCGAAACGTAGATACCAT 59.908 38.462 29.72 10.74 43.51 3.55
3512 3918 5.406175 CCAAAGTTTCGAAACGTAGATACCA 59.594 40.000 29.72 0.00 43.51 3.25
3513 3919 5.669602 GCCAAAGTTTCGAAACGTAGATACC 60.670 44.000 29.72 14.11 43.51 2.73
3514 3920 5.311271 GCCAAAGTTTCGAAACGTAGATAC 58.689 41.667 29.72 16.31 43.51 2.24
3515 3921 4.389687 GGCCAAAGTTTCGAAACGTAGATA 59.610 41.667 29.72 0.00 43.51 1.98
3516 3922 3.187842 GGCCAAAGTTTCGAAACGTAGAT 59.812 43.478 29.72 13.61 43.51 1.98
3517 3923 2.545106 GGCCAAAGTTTCGAAACGTAGA 59.455 45.455 29.72 0.00 43.51 2.59
3518 3924 2.660900 CGGCCAAAGTTTCGAAACGTAG 60.661 50.000 29.72 22.71 43.51 3.51
3519 3925 1.261089 CGGCCAAAGTTTCGAAACGTA 59.739 47.619 29.72 0.00 43.51 3.57
3520 3926 0.028374 CGGCCAAAGTTTCGAAACGT 59.972 50.000 29.72 25.73 43.51 3.99
3521 3927 1.266124 GCGGCCAAAGTTTCGAAACG 61.266 55.000 29.72 19.53 43.51 3.60
3522 3928 0.248702 TGCGGCCAAAGTTTCGAAAC 60.249 50.000 29.36 29.36 39.17 2.78
3523 3929 0.671251 ATGCGGCCAAAGTTTCGAAA 59.329 45.000 6.47 6.47 0.00 3.46
3524 3930 0.671251 AATGCGGCCAAAGTTTCGAA 59.329 45.000 2.24 0.00 0.00 3.71
3525 3931 0.039617 CAATGCGGCCAAAGTTTCGA 60.040 50.000 2.24 0.00 0.00 3.71
3526 3932 1.616872 GCAATGCGGCCAAAGTTTCG 61.617 55.000 2.24 0.00 0.00 3.46
3527 3933 0.319813 AGCAATGCGGCCAAAGTTTC 60.320 50.000 2.24 0.00 0.00 2.78
3528 3934 0.106521 AAGCAATGCGGCCAAAGTTT 59.893 45.000 2.24 0.00 0.00 2.66
3529 3935 0.319813 GAAGCAATGCGGCCAAAGTT 60.320 50.000 2.24 0.00 0.00 2.66
3530 3936 1.181098 AGAAGCAATGCGGCCAAAGT 61.181 50.000 2.24 0.00 0.00 2.66
3531 3937 0.810648 TAGAAGCAATGCGGCCAAAG 59.189 50.000 2.24 0.00 0.00 2.77
3532 3938 0.810648 CTAGAAGCAATGCGGCCAAA 59.189 50.000 2.24 0.00 0.00 3.28
3533 3939 0.322456 ACTAGAAGCAATGCGGCCAA 60.322 50.000 2.24 0.00 0.00 4.52
3534 3940 0.744414 GACTAGAAGCAATGCGGCCA 60.744 55.000 2.24 0.00 0.00 5.36
3535 3941 1.440145 GGACTAGAAGCAATGCGGCC 61.440 60.000 0.00 0.00 0.00 6.13
3536 3942 1.440145 GGGACTAGAAGCAATGCGGC 61.440 60.000 0.00 0.00 0.00 6.53
3537 3943 0.815615 GGGGACTAGAAGCAATGCGG 60.816 60.000 0.00 0.00 0.00 5.69
3538 3944 0.815615 GGGGGACTAGAAGCAATGCG 60.816 60.000 0.00 0.00 0.00 4.73
3539 3945 0.815615 CGGGGGACTAGAAGCAATGC 60.816 60.000 0.00 0.00 0.00 3.56
3540 3946 0.815615 GCGGGGGACTAGAAGCAATG 60.816 60.000 0.00 0.00 0.00 2.82
3541 3947 0.983378 AGCGGGGGACTAGAAGCAAT 60.983 55.000 0.00 0.00 0.00 3.56
3542 3948 1.612442 AGCGGGGGACTAGAAGCAA 60.612 57.895 0.00 0.00 0.00 3.91
3543 3949 2.038975 AGCGGGGGACTAGAAGCA 59.961 61.111 0.00 0.00 0.00 3.91
3544 3950 1.758906 AGAGCGGGGGACTAGAAGC 60.759 63.158 0.00 0.00 0.00 3.86
3545 3951 0.684805 ACAGAGCGGGGGACTAGAAG 60.685 60.000 0.00 0.00 0.00 2.85
3546 3952 0.683504 GACAGAGCGGGGGACTAGAA 60.684 60.000 0.00 0.00 0.00 2.10
3547 3953 1.076923 GACAGAGCGGGGGACTAGA 60.077 63.158 0.00 0.00 0.00 2.43
3548 3954 0.757188 ATGACAGAGCGGGGGACTAG 60.757 60.000 0.00 0.00 0.00 2.57
3549 3955 1.043116 CATGACAGAGCGGGGGACTA 61.043 60.000 0.00 0.00 0.00 2.59
3550 3956 2.039624 ATGACAGAGCGGGGGACT 59.960 61.111 0.00 0.00 0.00 3.85
3551 3957 2.187946 CATGACAGAGCGGGGGAC 59.812 66.667 0.00 0.00 0.00 4.46
3552 3958 3.785859 GCATGACAGAGCGGGGGA 61.786 66.667 0.00 0.00 0.00 4.81
3553 3959 4.100084 TGCATGACAGAGCGGGGG 62.100 66.667 0.00 0.00 0.00 5.40
3554 3960 2.821366 GTGCATGACAGAGCGGGG 60.821 66.667 0.00 0.00 0.00 5.73
3555 3961 2.046988 TGTGCATGACAGAGCGGG 60.047 61.111 0.00 0.00 0.00 6.13
3556 3962 1.229975 TTGTGTGCATGACAGAGCGG 61.230 55.000 0.00 0.00 34.28 5.52
3557 3963 0.800631 ATTGTGTGCATGACAGAGCG 59.199 50.000 0.00 0.00 34.28 5.03
3558 3964 2.257974 CATTGTGTGCATGACAGAGC 57.742 50.000 0.00 0.00 34.28 4.09
3572 3978 4.695396 TGCATCACAAAAGAAAGCATTGT 58.305 34.783 0.00 0.00 37.76 2.71
3573 3979 5.856126 ATGCATCACAAAAGAAAGCATTG 57.144 34.783 0.00 0.00 39.02 2.82
3574 3980 6.537301 CCATATGCATCACAAAAGAAAGCATT 59.463 34.615 0.19 0.00 40.97 3.56
3575 3981 6.046593 CCATATGCATCACAAAAGAAAGCAT 58.953 36.000 0.19 0.00 42.28 3.79
3576 3982 5.412640 CCATATGCATCACAAAAGAAAGCA 58.587 37.500 0.19 0.00 37.15 3.91
3577 3983 4.807304 CCCATATGCATCACAAAAGAAAGC 59.193 41.667 0.19 0.00 0.00 3.51
3578 3984 5.969423 ACCCATATGCATCACAAAAGAAAG 58.031 37.500 0.19 0.00 0.00 2.62
3579 3985 5.479724 TGACCCATATGCATCACAAAAGAAA 59.520 36.000 0.19 0.00 0.00 2.52
3580 3986 5.015515 TGACCCATATGCATCACAAAAGAA 58.984 37.500 0.19 0.00 0.00 2.52
3581 3987 4.598022 TGACCCATATGCATCACAAAAGA 58.402 39.130 0.19 0.00 0.00 2.52
3582 3988 4.987408 TGACCCATATGCATCACAAAAG 57.013 40.909 0.19 0.00 0.00 2.27
3583 3989 5.735285 TTTGACCCATATGCATCACAAAA 57.265 34.783 0.19 0.00 0.00 2.44
3584 3990 5.187381 ACATTTGACCCATATGCATCACAAA 59.813 36.000 0.19 8.59 0.00 2.83
3585 3991 4.710865 ACATTTGACCCATATGCATCACAA 59.289 37.500 0.19 0.00 0.00 3.33
3586 3992 4.279982 ACATTTGACCCATATGCATCACA 58.720 39.130 0.19 2.25 0.00 3.58
3587 3993 4.924305 ACATTTGACCCATATGCATCAC 57.076 40.909 0.19 0.00 0.00 3.06
3588 3994 5.936187 AAACATTTGACCCATATGCATCA 57.064 34.783 0.19 0.00 0.00 3.07
3589 3995 7.043565 AGAAAAACATTTGACCCATATGCATC 58.956 34.615 0.19 0.00 0.00 3.91
3590 3996 6.949715 AGAAAAACATTTGACCCATATGCAT 58.050 32.000 3.79 3.79 0.00 3.96
3591 3997 6.357579 AGAAAAACATTTGACCCATATGCA 57.642 33.333 0.00 0.00 0.00 3.96
3592 3998 8.947055 ATAAGAAAAACATTTGACCCATATGC 57.053 30.769 0.00 0.00 0.00 3.14
3596 4002 9.657419 GAATGATAAGAAAAACATTTGACCCAT 57.343 29.630 0.00 0.00 33.92 4.00
3597 4003 8.869109 AGAATGATAAGAAAAACATTTGACCCA 58.131 29.630 0.00 0.00 33.92 4.51
3598 4004 9.143631 CAGAATGATAAGAAAAACATTTGACCC 57.856 33.333 0.00 0.00 39.69 4.46
3599 4005 8.650714 GCAGAATGATAAGAAAAACATTTGACC 58.349 33.333 0.00 0.00 39.69 4.02
3600 4006 9.195411 TGCAGAATGATAAGAAAAACATTTGAC 57.805 29.630 0.00 0.00 39.69 3.18
3601 4007 9.195411 GTGCAGAATGATAAGAAAAACATTTGA 57.805 29.630 0.00 0.00 39.69 2.69
3602 4008 8.437742 GGTGCAGAATGATAAGAAAAACATTTG 58.562 33.333 0.00 0.00 39.69 2.32
3603 4009 7.603784 GGGTGCAGAATGATAAGAAAAACATTT 59.396 33.333 0.00 0.00 39.69 2.32
3604 4010 7.099120 GGGTGCAGAATGATAAGAAAAACATT 58.901 34.615 0.00 0.00 39.69 2.71
3605 4011 6.211184 TGGGTGCAGAATGATAAGAAAAACAT 59.789 34.615 0.00 0.00 39.69 2.71
3606 4012 5.538053 TGGGTGCAGAATGATAAGAAAAACA 59.462 36.000 0.00 0.00 39.69 2.83
3607 4013 6.024552 TGGGTGCAGAATGATAAGAAAAAC 57.975 37.500 0.00 0.00 39.69 2.43
3608 4014 6.855763 ATGGGTGCAGAATGATAAGAAAAA 57.144 33.333 0.00 0.00 39.69 1.94
3620 4026 0.187117 TTGGGTCAATGGGTGCAGAA 59.813 50.000 0.00 0.00 0.00 3.02
3633 4039 6.831976 AGTCCAGTGAATCTAATATTGGGTC 58.168 40.000 0.00 0.00 0.00 4.46
3635 4041 6.830912 TGAGTCCAGTGAATCTAATATTGGG 58.169 40.000 0.00 0.00 36.56 4.12
3651 4057 1.344763 ACCCGAAGAAACTGAGTCCAG 59.655 52.381 0.00 0.00 45.76 3.86
3707 4113 2.027625 GTCCTGGCGTTTCCTGTCG 61.028 63.158 0.00 0.00 35.26 4.35
3710 4116 1.672356 CAGGTCCTGGCGTTTCCTG 60.672 63.158 11.46 0.00 39.41 3.86
3734 4140 6.638468 CAGTTTCTGCACCTTTTTCATCTAAC 59.362 38.462 0.00 0.00 0.00 2.34
3743 4149 5.659440 TCTTTTCAGTTTCTGCACCTTTT 57.341 34.783 0.00 0.00 0.00 2.27
3773 4179 9.103861 GATAACTTCCTTATTTCCTTCTCAGTG 57.896 37.037 0.00 0.00 0.00 3.66
3836 4242 4.898265 AGCTTACTGATCTTGCCTGAGATA 59.102 41.667 0.00 0.00 36.54 1.98
4026 4432 9.450807 AATCTACTAATTTGCATATGCGAAAAC 57.549 29.630 29.48 1.83 46.42 2.43
4095 4501 3.119101 CGTGCCTTACTATCACCTCACTT 60.119 47.826 0.00 0.00 0.00 3.16
4110 4516 2.226330 TCACTGTTAATTGCGTGCCTT 58.774 42.857 0.00 0.00 0.00 4.35
4117 4523 3.855950 GCTCATTGCTCACTGTTAATTGC 59.144 43.478 0.00 0.00 38.95 3.56
4305 4715 5.083533 TGGACAAAAAGCTGTGAACAAAT 57.916 34.783 0.00 0.00 0.00 2.32
4317 4727 5.408909 TGCAATGCATTACATGGACAAAAAG 59.591 36.000 12.53 0.00 39.60 2.27
4332 4743 6.097356 CAGTCAACTAAATCTTGCAATGCAT 58.903 36.000 9.39 0.00 38.76 3.96
4459 4870 6.442112 GCATCAGCCTGGATAAAAGTATTTC 58.558 40.000 0.00 0.00 33.03 2.17
4568 4979 2.622942 TGATCTTCACCAAACCTTGCAC 59.377 45.455 0.00 0.00 0.00 4.57
4584 4995 4.197750 GCTTGATCAAGTCCATGTGATCT 58.802 43.478 30.88 4.12 46.82 2.75
4658 5069 6.307318 CGTAGTAACATAGTTCTTTTGAGCGT 59.693 38.462 0.00 0.00 34.69 5.07
4679 5090 2.029244 CGCAGCCAGTCATTTAACGTAG 59.971 50.000 0.00 0.00 0.00 3.51
4812 5223 0.179001 TCTCGGATATCCTCGCCACA 60.179 55.000 19.61 0.00 0.00 4.17
4836 5247 0.453282 CTTGCATTGCCTTGACGACG 60.453 55.000 6.12 0.00 0.00 5.12
4926 5337 0.395724 GGCCCCTGTCCATACCTTTG 60.396 60.000 0.00 0.00 0.00 2.77
4932 5343 0.399091 CTCTCAGGCCCCTGTCCATA 60.399 60.000 13.66 0.00 43.96 2.74
4943 5354 2.026822 TCCTTTTCCATCACTCTCAGGC 60.027 50.000 0.00 0.00 0.00 4.85
4971 5382 3.446570 AGAGCCTTGCGCATTGCC 61.447 61.111 23.19 16.18 45.60 4.52
4972 5383 2.202570 CAGAGCCTTGCGCATTGC 60.203 61.111 20.39 20.39 46.70 3.56
4973 5384 1.588824 TTCCAGAGCCTTGCGCATTG 61.589 55.000 12.75 6.62 41.38 2.82
5085 5496 1.508545 GCTCGACTGCAGACTGCTA 59.491 57.895 26.94 13.16 45.31 3.49
5149 5560 6.550108 AGGTTGAGCTCCTTATAAGTATTCGA 59.450 38.462 12.15 0.63 30.18 3.71
5151 5562 7.382759 CGAAGGTTGAGCTCCTTATAAGTATTC 59.617 40.741 12.15 4.62 44.19 1.75
5166 5577 2.734673 CTCAGCGCGAAGGTTGAGC 61.735 63.158 12.10 0.00 0.00 4.26
5181 5592 1.272203 ACTCGAGCTTTCTCCTCCTCA 60.272 52.381 13.61 0.00 35.94 3.86
5236 5647 0.665369 GCAGCAAACACAGACCATGC 60.665 55.000 0.00 0.00 37.28 4.06
5313 5724 1.078709 CCATGCACACTACAGTTCCG 58.921 55.000 0.00 0.00 0.00 4.30
5346 5758 4.179361 CTGAAAGCCTGCCACCAA 57.821 55.556 0.00 0.00 0.00 3.67
5455 5881 1.103398 CCGGCCATCCAATCCTCAAC 61.103 60.000 2.24 0.00 0.00 3.18
5489 5915 1.207089 TCCTTGCTCTTCACCGGTATG 59.793 52.381 6.87 0.00 0.00 2.39
5490 5916 1.568504 TCCTTGCTCTTCACCGGTAT 58.431 50.000 6.87 0.00 0.00 2.73
5494 5920 1.532868 CAGTTTCCTTGCTCTTCACCG 59.467 52.381 0.00 0.00 0.00 4.94
5497 5923 2.092429 ACCACAGTTTCCTTGCTCTTCA 60.092 45.455 0.00 0.00 0.00 3.02
5530 5967 2.037367 AGGTAGCCGAGTGCCTCA 59.963 61.111 3.57 0.00 42.71 3.86
5586 6025 0.332632 AGCCCCATTGCTTAGCTCAA 59.667 50.000 5.60 0.00 38.85 3.02
5623 6062 1.677820 CGGTGTATGGAAACCCCTCAC 60.678 57.143 0.00 0.00 35.38 3.51
5645 6084 5.773239 TCGATTTCTTCTTTTTACGCGAT 57.227 34.783 15.93 0.00 0.00 4.58
5649 6088 6.827641 TGACCATCGATTTCTTCTTTTTACG 58.172 36.000 0.00 0.00 0.00 3.18
5657 6099 3.547613 GCAGCATGACCATCGATTTCTTC 60.548 47.826 0.00 0.00 39.69 2.87
5660 6102 1.002033 GGCAGCATGACCATCGATTTC 60.002 52.381 0.00 0.00 39.24 2.17
5731 6176 0.315886 ATGTCCGCAACACGTCTGTA 59.684 50.000 0.00 0.00 41.75 2.74
5739 6184 4.634703 ACCGCCATGTCCGCAACA 62.635 61.111 0.00 0.00 43.51 3.33
5763 6208 2.029073 ATTGTATCCCTCGGCGCG 59.971 61.111 0.00 0.00 0.00 6.86
5794 6269 2.822399 CCGTCAGGCTCCCCATAC 59.178 66.667 0.00 0.00 0.00 2.39
5829 6318 3.903360 ACTACAACTGAAAGAGTCGCTC 58.097 45.455 0.00 0.00 37.43 5.03
5889 6378 6.535963 TCTACTATATCCTACGGTCGATCA 57.464 41.667 0.00 0.00 0.00 2.92
5928 6443 2.162809 ACACAACAAGAACAAACGACCC 59.837 45.455 0.00 0.00 0.00 4.46
5976 6493 0.319469 CCAACCAACGGCACCAATTC 60.319 55.000 0.00 0.00 0.00 2.17
5986 6503 3.495001 ACAAAACAAACAACCAACCAACG 59.505 39.130 0.00 0.00 0.00 4.10
6022 6547 7.338449 AGAAAACAACAGGCTAAGTTCAGTTAA 59.662 33.333 0.00 0.00 0.00 2.01
6035 6560 2.423538 ACACACAGAGAAAACAACAGGC 59.576 45.455 0.00 0.00 0.00 4.85
6037 6562 4.154015 TGACACACACAGAGAAAACAACAG 59.846 41.667 0.00 0.00 0.00 3.16
6038 6563 4.068599 TGACACACACAGAGAAAACAACA 58.931 39.130 0.00 0.00 0.00 3.33
6039 6564 4.678509 TGACACACACAGAGAAAACAAC 57.321 40.909 0.00 0.00 0.00 3.32
6040 6565 7.566760 AATATGACACACACAGAGAAAACAA 57.433 32.000 0.00 0.00 0.00 2.83
6041 6566 7.566760 AAATATGACACACACAGAGAAAACA 57.433 32.000 0.00 0.00 0.00 2.83
6042 6567 7.321271 CGAAAATATGACACACACAGAGAAAAC 59.679 37.037 0.00 0.00 0.00 2.43
6043 6568 7.351981 CGAAAATATGACACACACAGAGAAAA 58.648 34.615 0.00 0.00 0.00 2.29
6044 6569 6.565811 GCGAAAATATGACACACACAGAGAAA 60.566 38.462 0.00 0.00 0.00 2.52
6045 6570 5.107104 GCGAAAATATGACACACACAGAGAA 60.107 40.000 0.00 0.00 0.00 2.87
6102 6643 2.865119 TCAGCTTCAGCAAATCCAGA 57.135 45.000 0.75 0.00 45.16 3.86
6119 6660 3.372440 TCAGTAGAGGCTCACTGATCA 57.628 47.619 29.45 17.45 44.70 2.92
6159 6700 1.869648 ACCTCTAGGGGATGTCAGGAT 59.130 52.381 18.04 0.00 40.27 3.24
6166 6707 2.883026 CTACCAGACCTCTAGGGGATG 58.117 57.143 18.04 13.47 40.27 3.51
6167 6708 1.148236 GCTACCAGACCTCTAGGGGAT 59.852 57.143 18.04 0.00 40.27 3.85
6168 6709 0.556747 GCTACCAGACCTCTAGGGGA 59.443 60.000 18.04 0.00 40.27 4.81
6169 6710 0.261991 TGCTACCAGACCTCTAGGGG 59.738 60.000 7.26 7.26 40.27 4.79
6195 6770 7.122204 TGCACACTGTGATGTAGTAATACTACT 59.878 37.037 25.43 14.40 42.45 2.57
6197 6772 7.399245 TGCACACTGTGATGTAGTAATACTA 57.601 36.000 15.86 0.00 35.23 1.82
6198 6773 6.280855 TGCACACTGTGATGTAGTAATACT 57.719 37.500 15.86 0.00 35.23 2.12
6199 6774 5.005779 GCTGCACACTGTGATGTAGTAATAC 59.994 44.000 15.86 0.00 35.23 1.89
6200 6775 5.105351 AGCTGCACACTGTGATGTAGTAATA 60.105 40.000 15.86 0.00 35.23 0.98
6201 6776 3.935203 GCTGCACACTGTGATGTAGTAAT 59.065 43.478 15.86 0.00 35.23 1.89
6202 6777 3.006859 AGCTGCACACTGTGATGTAGTAA 59.993 43.478 15.86 0.00 35.23 2.24
6203 6778 2.562738 AGCTGCACACTGTGATGTAGTA 59.437 45.455 15.86 0.00 35.23 1.82
6204 6779 1.345741 AGCTGCACACTGTGATGTAGT 59.654 47.619 15.86 6.35 35.23 2.73
6205 6780 2.090400 AGCTGCACACTGTGATGTAG 57.910 50.000 15.86 16.79 35.23 2.74
6209 6784 1.233019 GTCAAGCTGCACACTGTGAT 58.767 50.000 15.86 0.00 35.23 3.06
6240 6815 2.093106 ACGATACCCAGTGTGAGAGAC 58.907 52.381 0.00 0.00 0.00 3.36
6241 6816 2.509166 ACGATACCCAGTGTGAGAGA 57.491 50.000 0.00 0.00 0.00 3.10
6242 6817 3.014623 TGTACGATACCCAGTGTGAGAG 58.985 50.000 0.00 0.00 0.00 3.20
6243 6818 2.751259 GTGTACGATACCCAGTGTGAGA 59.249 50.000 0.00 0.00 0.00 3.27
6244 6819 2.753452 AGTGTACGATACCCAGTGTGAG 59.247 50.000 0.00 0.00 0.00 3.51
6245 6820 2.490509 CAGTGTACGATACCCAGTGTGA 59.509 50.000 0.00 0.00 0.00 3.58
6246 6821 2.416836 CCAGTGTACGATACCCAGTGTG 60.417 54.545 0.00 0.00 0.00 3.82
6247 6822 1.822990 CCAGTGTACGATACCCAGTGT 59.177 52.381 0.00 0.00 0.00 3.55
6248 6823 1.470979 GCCAGTGTACGATACCCAGTG 60.471 57.143 0.00 0.00 0.00 3.66
6249 6824 0.822164 GCCAGTGTACGATACCCAGT 59.178 55.000 0.00 0.00 0.00 4.00
6250 6825 1.112113 AGCCAGTGTACGATACCCAG 58.888 55.000 0.00 0.00 0.00 4.45
6251 6826 2.026641 GTAGCCAGTGTACGATACCCA 58.973 52.381 0.00 0.00 0.00 4.51
6252 6827 2.034305 CAGTAGCCAGTGTACGATACCC 59.966 54.545 0.00 0.00 0.00 3.69
6253 6828 2.543238 GCAGTAGCCAGTGTACGATACC 60.543 54.545 0.00 0.00 33.58 2.73
6254 6829 2.358267 AGCAGTAGCCAGTGTACGATAC 59.642 50.000 0.00 0.00 43.56 2.24
6255 6830 2.357952 CAGCAGTAGCCAGTGTACGATA 59.642 50.000 0.00 0.00 43.56 2.92
6256 6831 1.135139 CAGCAGTAGCCAGTGTACGAT 59.865 52.381 0.00 0.00 43.56 3.73
6257 6832 0.526211 CAGCAGTAGCCAGTGTACGA 59.474 55.000 0.00 0.00 43.56 3.43
6258 6833 1.078759 GCAGCAGTAGCCAGTGTACG 61.079 60.000 0.00 0.00 43.56 3.67
6259 6834 0.247736 AGCAGCAGTAGCCAGTGTAC 59.752 55.000 0.00 0.00 43.56 2.90
6260 6835 0.247460 CAGCAGCAGTAGCCAGTGTA 59.753 55.000 0.00 0.00 43.56 2.90
6261 6836 1.004080 CAGCAGCAGTAGCCAGTGT 60.004 57.895 0.00 0.00 43.56 3.55
6262 6837 0.321034 TTCAGCAGCAGTAGCCAGTG 60.321 55.000 0.00 0.00 43.56 3.66
6263 6838 0.321122 GTTCAGCAGCAGTAGCCAGT 60.321 55.000 0.00 0.00 43.56 4.00
6264 6839 0.321034 TGTTCAGCAGCAGTAGCCAG 60.321 55.000 0.00 0.00 43.56 4.85
6265 6840 0.325933 ATGTTCAGCAGCAGTAGCCA 59.674 50.000 0.00 0.00 43.56 4.75
6266 6841 0.731417 CATGTTCAGCAGCAGTAGCC 59.269 55.000 0.00 0.00 43.56 3.93
6267 6842 0.731417 CCATGTTCAGCAGCAGTAGC 59.269 55.000 0.00 0.00 42.56 3.58
6268 6843 0.731417 GCCATGTTCAGCAGCAGTAG 59.269 55.000 0.00 0.00 0.00 2.57
6269 6844 0.677731 GGCCATGTTCAGCAGCAGTA 60.678 55.000 0.00 0.00 0.00 2.74
6270 6845 1.975407 GGCCATGTTCAGCAGCAGT 60.975 57.895 0.00 0.00 0.00 4.40
6271 6846 2.882876 GGCCATGTTCAGCAGCAG 59.117 61.111 0.00 0.00 0.00 4.24
6272 6847 3.057548 CGGCCATGTTCAGCAGCA 61.058 61.111 2.24 0.00 0.00 4.41
6273 6848 2.747460 TCGGCCATGTTCAGCAGC 60.747 61.111 2.24 0.00 0.00 5.25
6274 6849 1.364626 GAGTCGGCCATGTTCAGCAG 61.365 60.000 2.24 0.00 0.00 4.24
6275 6850 1.375908 GAGTCGGCCATGTTCAGCA 60.376 57.895 2.24 0.00 0.00 4.41
6276 6851 2.109126 GGAGTCGGCCATGTTCAGC 61.109 63.158 2.24 0.00 0.00 4.26
6277 6852 1.021390 GTGGAGTCGGCCATGTTCAG 61.021 60.000 2.24 0.00 40.68 3.02
6278 6853 1.003839 GTGGAGTCGGCCATGTTCA 60.004 57.895 2.24 0.00 40.68 3.18
6279 6854 2.100631 CGTGGAGTCGGCCATGTTC 61.101 63.158 2.24 0.00 40.68 3.18
6280 6855 1.899437 ATCGTGGAGTCGGCCATGTT 61.899 55.000 2.24 2.39 43.83 2.71
6281 6856 1.899437 AATCGTGGAGTCGGCCATGT 61.899 55.000 2.24 0.00 43.83 3.21
6282 6857 1.153369 AATCGTGGAGTCGGCCATG 60.153 57.895 2.24 0.00 44.60 3.66
6283 6858 1.144057 GAATCGTGGAGTCGGCCAT 59.856 57.895 2.24 0.00 40.68 4.40
6284 6859 1.613317 ATGAATCGTGGAGTCGGCCA 61.613 55.000 2.24 0.00 35.02 5.36
6285 6860 0.462047 AATGAATCGTGGAGTCGGCC 60.462 55.000 0.00 0.00 28.49 6.13
6286 6861 1.369625 AAATGAATCGTGGAGTCGGC 58.630 50.000 0.00 0.00 28.49 5.54
6287 6862 3.000041 TGAAAATGAATCGTGGAGTCGG 59.000 45.455 0.00 0.00 28.49 4.79
6288 6863 3.481951 CGTGAAAATGAATCGTGGAGTCG 60.482 47.826 0.00 0.00 28.49 4.18
6289 6864 3.725010 GCGTGAAAATGAATCGTGGAGTC 60.725 47.826 0.00 0.00 0.00 3.36
6290 6865 2.159627 GCGTGAAAATGAATCGTGGAGT 59.840 45.455 0.00 0.00 0.00 3.85
6291 6866 2.159430 TGCGTGAAAATGAATCGTGGAG 59.841 45.455 0.00 0.00 0.00 3.86
6292 6867 2.147150 TGCGTGAAAATGAATCGTGGA 58.853 42.857 0.00 0.00 0.00 4.02
6293 6868 2.610219 TGCGTGAAAATGAATCGTGG 57.390 45.000 0.00 0.00 0.00 4.94
6294 6869 2.335320 CGTTGCGTGAAAATGAATCGTG 59.665 45.455 0.00 0.00 0.00 4.35
6295 6870 2.570169 CGTTGCGTGAAAATGAATCGT 58.430 42.857 0.00 0.00 0.00 3.73
6296 6871 1.904412 CCGTTGCGTGAAAATGAATCG 59.096 47.619 0.00 0.00 0.00 3.34
6297 6872 2.250188 CCCGTTGCGTGAAAATGAATC 58.750 47.619 0.00 0.00 0.00 2.52
6298 6873 1.611491 ACCCGTTGCGTGAAAATGAAT 59.389 42.857 0.00 0.00 0.00 2.57
6299 6874 1.025812 ACCCGTTGCGTGAAAATGAA 58.974 45.000 0.00 0.00 0.00 2.57
6300 6875 0.309302 CACCCGTTGCGTGAAAATGA 59.691 50.000 0.00 0.00 32.77 2.57
6301 6876 0.030101 ACACCCGTTGCGTGAAAATG 59.970 50.000 0.00 0.00 35.17 2.32
6302 6877 0.030101 CACACCCGTTGCGTGAAAAT 59.970 50.000 0.00 0.00 35.17 1.82
6303 6878 1.306642 ACACACCCGTTGCGTGAAAA 61.307 50.000 0.00 0.00 35.17 2.29
6304 6879 0.461516 TACACACCCGTTGCGTGAAA 60.462 50.000 0.00 0.00 35.17 2.69
6305 6880 1.143401 TACACACCCGTTGCGTGAA 59.857 52.632 0.00 0.00 35.17 3.18
6306 6881 1.592131 GTACACACCCGTTGCGTGA 60.592 57.895 0.00 0.00 35.17 4.35
6307 6882 2.600475 GGTACACACCCGTTGCGTG 61.600 63.158 0.00 0.00 39.11 5.34
6308 6883 2.280321 GGTACACACCCGTTGCGT 60.280 61.111 0.00 0.00 39.11 5.24
6316 6891 0.391263 GGCTGCTACAGGTACACACC 60.391 60.000 0.00 0.00 46.19 4.16
6317 6892 0.608640 AGGCTGCTACAGGTACACAC 59.391 55.000 0.00 0.00 31.21 3.82
6318 6893 1.822990 GTAGGCTGCTACAGGTACACA 59.177 52.381 0.00 0.00 31.21 3.72
6319 6894 2.100989 AGTAGGCTGCTACAGGTACAC 58.899 52.381 2.25 0.00 32.56 2.90
6320 6895 2.100197 CAGTAGGCTGCTACAGGTACA 58.900 52.381 4.33 0.00 35.77 2.90
6321 6896 2.873133 CAGTAGGCTGCTACAGGTAC 57.127 55.000 4.33 0.00 35.77 3.34
6331 6906 2.437359 GGTGCTGGCAGTAGGCTG 60.437 66.667 17.16 0.00 45.23 4.85
6332 6907 3.721706 GGGTGCTGGCAGTAGGCT 61.722 66.667 17.16 0.00 44.01 4.58
6334 6909 2.650813 GATCGGGTGCTGGCAGTAGG 62.651 65.000 17.16 4.20 0.00 3.18
6335 6910 1.227380 GATCGGGTGCTGGCAGTAG 60.227 63.158 17.16 0.00 0.00 2.57
6336 6911 1.987306 TGATCGGGTGCTGGCAGTA 60.987 57.895 17.16 9.18 0.00 2.74
6337 6912 3.321648 TGATCGGGTGCTGGCAGT 61.322 61.111 17.16 0.00 0.00 4.40
6338 6913 2.821366 GTGATCGGGTGCTGGCAG 60.821 66.667 10.94 10.94 0.00 4.85
6339 6914 3.321648 AGTGATCGGGTGCTGGCA 61.322 61.111 0.00 0.00 0.00 4.92
6340 6915 2.821366 CAGTGATCGGGTGCTGGC 60.821 66.667 0.00 0.00 0.00 4.85
6341 6916 2.124983 CCAGTGATCGGGTGCTGG 60.125 66.667 0.00 0.00 41.89 4.85
6342 6917 1.448540 GACCAGTGATCGGGTGCTG 60.449 63.158 8.11 2.10 41.88 4.41
6343 6918 2.660064 GGACCAGTGATCGGGTGCT 61.660 63.158 13.06 0.00 43.97 4.40
6344 6919 2.125106 GGACCAGTGATCGGGTGC 60.125 66.667 8.11 7.39 41.88 5.01
6345 6920 1.219124 CTGGACCAGTGATCGGGTG 59.781 63.158 13.84 0.00 41.88 4.61
6346 6921 2.660064 GCTGGACCAGTGATCGGGT 61.660 63.158 22.58 3.43 44.31 5.28
6347 6922 1.976132 ATGCTGGACCAGTGATCGGG 61.976 60.000 22.58 0.00 33.43 5.14
6348 6923 0.812811 CATGCTGGACCAGTGATCGG 60.813 60.000 22.58 3.71 33.43 4.18
6349 6924 1.434622 GCATGCTGGACCAGTGATCG 61.435 60.000 22.58 8.46 33.43 3.69
6350 6925 0.393402 TGCATGCTGGACCAGTGATC 60.393 55.000 22.58 10.46 33.43 2.92
6351 6926 0.257905 ATGCATGCTGGACCAGTGAT 59.742 50.000 22.58 12.15 33.43 3.06
6352 6927 0.678684 CATGCATGCTGGACCAGTGA 60.679 55.000 22.58 10.34 33.43 3.41
6353 6928 1.807226 CATGCATGCTGGACCAGTG 59.193 57.895 22.58 14.70 33.43 3.66
6354 6929 4.331622 CATGCATGCTGGACCAGT 57.668 55.556 22.58 0.58 33.43 4.00
6379 6954 2.945447 TCAATGGTGCTTGCTTATGC 57.055 45.000 0.00 0.00 40.20 3.14
6380 6955 3.624900 CGATCAATGGTGCTTGCTTATG 58.375 45.455 0.00 0.00 0.00 1.90
6381 6956 2.033801 GCGATCAATGGTGCTTGCTTAT 59.966 45.455 0.00 0.00 29.16 1.73
6382 6957 1.401552 GCGATCAATGGTGCTTGCTTA 59.598 47.619 0.00 0.00 29.16 3.09
6383 6958 0.171903 GCGATCAATGGTGCTTGCTT 59.828 50.000 0.00 0.00 29.16 3.91
6384 6959 1.660560 GGCGATCAATGGTGCTTGCT 61.661 55.000 0.00 0.00 31.92 3.91
6385 6960 1.226773 GGCGATCAATGGTGCTTGC 60.227 57.895 0.00 0.00 30.67 4.01
6386 6961 0.099968 CAGGCGATCAATGGTGCTTG 59.900 55.000 0.00 0.00 0.00 4.01
6387 6962 0.035152 TCAGGCGATCAATGGTGCTT 60.035 50.000 0.00 0.00 0.00 3.91
6388 6963 0.035152 TTCAGGCGATCAATGGTGCT 60.035 50.000 0.00 0.00 0.00 4.40
6389 6964 0.810648 TTTCAGGCGATCAATGGTGC 59.189 50.000 0.00 0.00 0.00 5.01
6390 6965 3.379372 AGATTTTCAGGCGATCAATGGTG 59.621 43.478 0.00 0.00 0.00 4.17
6391 6966 3.624777 AGATTTTCAGGCGATCAATGGT 58.375 40.909 0.00 0.00 0.00 3.55
6392 6967 4.644103 AAGATTTTCAGGCGATCAATGG 57.356 40.909 0.00 0.00 0.00 3.16
6393 6968 6.956299 AAAAAGATTTTCAGGCGATCAATG 57.044 33.333 0.00 0.00 0.00 2.82
6394 6969 7.830739 AGTAAAAAGATTTTCAGGCGATCAAT 58.169 30.769 0.00 0.00 0.00 2.57
6395 6970 7.214467 AGTAAAAAGATTTTCAGGCGATCAA 57.786 32.000 0.00 0.00 0.00 2.57
6396 6971 6.817765 AGTAAAAAGATTTTCAGGCGATCA 57.182 33.333 0.00 0.00 0.00 2.92
6397 6972 8.612619 TGATAGTAAAAAGATTTTCAGGCGATC 58.387 33.333 0.00 0.00 0.00 3.69
6398 6973 8.506168 TGATAGTAAAAAGATTTTCAGGCGAT 57.494 30.769 0.00 0.00 0.00 4.58
6399 6974 7.915293 TGATAGTAAAAAGATTTTCAGGCGA 57.085 32.000 0.00 0.00 0.00 5.54
6400 6975 7.166473 GCATGATAGTAAAAAGATTTTCAGGCG 59.834 37.037 0.00 0.00 32.88 5.52
6401 6976 7.975616 TGCATGATAGTAAAAAGATTTTCAGGC 59.024 33.333 0.00 0.00 38.68 4.85
6402 6977 9.294030 GTGCATGATAGTAAAAAGATTTTCAGG 57.706 33.333 0.00 0.00 0.00 3.86
6403 6978 9.003112 CGTGCATGATAGTAAAAAGATTTTCAG 57.997 33.333 0.00 0.00 0.00 3.02
6404 6979 7.484641 GCGTGCATGATAGTAAAAAGATTTTCA 59.515 33.333 10.93 0.00 0.00 2.69
6405 6980 7.044052 GGCGTGCATGATAGTAAAAAGATTTTC 60.044 37.037 10.93 0.00 0.00 2.29
6406 6981 6.751888 GGCGTGCATGATAGTAAAAAGATTTT 59.248 34.615 10.93 0.00 0.00 1.82
6407 6982 6.127758 TGGCGTGCATGATAGTAAAAAGATTT 60.128 34.615 10.93 0.00 0.00 2.17
6408 6983 5.356751 TGGCGTGCATGATAGTAAAAAGATT 59.643 36.000 10.93 0.00 0.00 2.40
6409 6984 4.881273 TGGCGTGCATGATAGTAAAAAGAT 59.119 37.500 10.93 0.00 0.00 2.40
6410 6985 4.257731 TGGCGTGCATGATAGTAAAAAGA 58.742 39.130 10.93 0.00 0.00 2.52
6411 6986 4.614555 TGGCGTGCATGATAGTAAAAAG 57.385 40.909 10.93 0.00 0.00 2.27
6412 6987 5.378292 TTTGGCGTGCATGATAGTAAAAA 57.622 34.783 10.93 0.00 0.00 1.94
6413 6988 5.378292 TTTTGGCGTGCATGATAGTAAAA 57.622 34.783 10.93 6.18 0.00 1.52
6414 6989 5.378292 TTTTTGGCGTGCATGATAGTAAA 57.622 34.783 10.93 0.19 0.00 2.01
6415 6990 5.574891 ATTTTTGGCGTGCATGATAGTAA 57.425 34.783 10.93 0.00 0.00 2.24
6416 6991 5.008217 GGTATTTTTGGCGTGCATGATAGTA 59.992 40.000 10.93 0.00 0.00 1.82
6417 6992 4.202010 GGTATTTTTGGCGTGCATGATAGT 60.202 41.667 10.93 0.00 0.00 2.12
6418 6993 4.202000 TGGTATTTTTGGCGTGCATGATAG 60.202 41.667 10.93 0.00 0.00 2.08
6419 6994 3.696548 TGGTATTTTTGGCGTGCATGATA 59.303 39.130 10.93 0.00 0.00 2.15
6420 6995 2.495270 TGGTATTTTTGGCGTGCATGAT 59.505 40.909 10.93 0.00 0.00 2.45
6421 6996 1.889170 TGGTATTTTTGGCGTGCATGA 59.111 42.857 10.93 0.00 0.00 3.07
6422 6997 2.360553 TGGTATTTTTGGCGTGCATG 57.639 45.000 0.09 0.09 0.00 4.06
6423 6998 3.608316 AATGGTATTTTTGGCGTGCAT 57.392 38.095 0.00 0.00 0.00 3.96
6424 6999 3.062763 CAAATGGTATTTTTGGCGTGCA 58.937 40.909 0.00 0.00 31.82 4.57
6425 7000 2.414825 CCAAATGGTATTTTTGGCGTGC 59.585 45.455 2.53 0.00 44.69 5.34
6431 7006 5.008118 ACGGTTTTGCCAAATGGTATTTTTG 59.992 36.000 0.71 0.00 36.97 2.44
6432 7007 5.008118 CACGGTTTTGCCAAATGGTATTTTT 59.992 36.000 0.71 0.00 36.97 1.94
6433 7008 4.513318 CACGGTTTTGCCAAATGGTATTTT 59.487 37.500 0.71 0.00 36.97 1.82
6434 7009 4.061596 CACGGTTTTGCCAAATGGTATTT 58.938 39.130 0.71 0.00 36.97 1.40
6435 7010 3.658709 CACGGTTTTGCCAAATGGTATT 58.341 40.909 0.71 0.00 36.97 1.89
6436 7011 2.611722 GCACGGTTTTGCCAAATGGTAT 60.612 45.455 0.71 0.00 36.42 2.73
6437 7012 1.269831 GCACGGTTTTGCCAAATGGTA 60.270 47.619 0.71 0.00 36.42 3.25
6438 7013 0.531753 GCACGGTTTTGCCAAATGGT 60.532 50.000 0.71 0.00 36.42 3.55
6439 7014 0.531532 TGCACGGTTTTGCCAAATGG 60.532 50.000 0.00 0.00 42.25 3.16
6440 7015 1.460359 GATGCACGGTTTTGCCAAATG 59.540 47.619 0.00 0.00 42.25 2.32
6441 7016 1.794512 GATGCACGGTTTTGCCAAAT 58.205 45.000 0.00 0.00 42.25 2.32
6442 7017 0.596083 CGATGCACGGTTTTGCCAAA 60.596 50.000 0.00 0.00 42.25 3.28
6443 7018 1.007964 CGATGCACGGTTTTGCCAA 60.008 52.632 0.00 0.00 42.25 4.52
6444 7019 2.642129 CGATGCACGGTTTTGCCA 59.358 55.556 0.00 0.00 42.25 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.