Multiple sequence alignment - TraesCS5A01G343700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G343700 chr5A 100.000 2426 0 0 1 2426 548241313 548238888 0.000000e+00 4481.0
1 TraesCS5A01G343700 chr5A 97.267 439 12 0 1629 2067 117380667 117381105 0.000000e+00 745.0
2 TraesCS5A01G343700 chr5A 96.614 443 15 0 1625 2067 174592976 174592534 0.000000e+00 736.0
3 TraesCS5A01G343700 chr5A 96.128 439 17 0 1629 2067 220957082 220956644 0.000000e+00 717.0
4 TraesCS5A01G343700 chr5A 84.397 705 80 14 820 1506 548230937 548230245 0.000000e+00 665.0
5 TraesCS5A01G343700 chr5A 87.500 536 52 6 974 1506 549153805 549154328 2.670000e-169 604.0
6 TraesCS5A01G343700 chr5B 86.592 977 66 23 531 1475 527065222 527064279 0.000000e+00 1018.0
7 TraesCS5A01G343700 chr5B 88.783 526 58 1 982 1506 528524726 528525251 0.000000e+00 643.0
8 TraesCS5A01G343700 chr5B 83.734 707 85 17 820 1506 527049910 527049214 2.030000e-180 641.0
9 TraesCS5A01G343700 chr5B 86.122 526 56 12 870 1380 528537423 528537946 3.530000e-153 551.0
10 TraesCS5A01G343700 chr5B 83.333 468 71 4 1044 1506 526587394 526586929 2.230000e-115 425.0
11 TraesCS5A01G343700 chr5B 96.087 230 8 1 2197 2426 527064284 527064056 8.190000e-100 374.0
12 TraesCS5A01G343700 chr5B 89.252 214 21 2 2192 2403 527058235 527058022 1.430000e-67 267.0
13 TraesCS5A01G343700 chr5B 84.862 218 26 5 2189 2403 528538316 528538529 1.890000e-51 213.0
14 TraesCS5A01G343700 chr5B 81.095 201 23 10 632 819 527059358 527059160 1.940000e-31 147.0
15 TraesCS5A01G343700 chr5B 74.110 309 61 14 463 761 527061378 527061079 2.550000e-20 110.0
16 TraesCS5A01G343700 chr5D 92.550 698 37 10 820 1513 434322981 434323667 0.000000e+00 987.0
17 TraesCS5A01G343700 chr5D 89.548 708 55 6 820 1508 434403054 434402347 0.000000e+00 880.0
18 TraesCS5A01G343700 chr5D 84.648 697 86 16 820 1506 434393853 434393168 0.000000e+00 675.0
19 TraesCS5A01G343700 chr5D 89.154 544 55 4 974 1513 435237618 435238161 0.000000e+00 675.0
20 TraesCS5A01G343700 chr5D 94.444 396 17 4 426 819 434403498 434403106 2.670000e-169 604.0
21 TraesCS5A01G343700 chr5D 91.420 338 13 7 497 819 434322593 434322929 1.320000e-122 449.0
22 TraesCS5A01G343700 chr5D 88.391 379 23 4 2068 2426 434323757 434324134 1.030000e-118 436.0
23 TraesCS5A01G343700 chr5D 96.471 255 8 1 117 370 434322154 434322408 1.040000e-113 420.0
24 TraesCS5A01G343700 chr5D 87.805 164 18 2 2189 2350 435238348 435238511 8.850000e-45 191.0
25 TraesCS5A01G343700 chr5D 93.162 117 7 1 820 936 434329877 434329992 1.150000e-38 171.0
26 TraesCS5A01G343700 chr5D 86.022 93 8 4 345 434 306182028 306182118 7.140000e-16 95.3
27 TraesCS5A01G343700 chr5D 84.043 94 4 1 1539 1632 434402345 434402263 2.000000e-11 80.5
28 TraesCS5A01G343700 chr7A 96.583 439 15 0 1629 2067 379913589 379914027 0.000000e+00 728.0
29 TraesCS5A01G343700 chr7D 97.555 409 10 0 1659 2067 473864724 473865132 0.000000e+00 701.0
30 TraesCS5A01G343700 chr7D 90.361 83 5 3 351 433 482249137 482249216 3.300000e-19 106.0
31 TraesCS5A01G343700 chr2A 92.483 439 33 0 1629 2067 235298881 235299319 1.580000e-176 628.0
32 TraesCS5A01G343700 chr2A 92.000 75 4 2 351 425 762391401 762391473 1.190000e-18 104.0
33 TraesCS5A01G343700 chr4B 92.506 427 30 1 1643 2067 193984106 193984532 5.730000e-171 610.0
34 TraesCS5A01G343700 chr2D 93.155 336 23 0 1681 2016 539020034 539020369 6.030000e-136 494.0
35 TraesCS5A01G343700 chr6A 97.203 286 8 0 1626 1911 91291486 91291771 3.630000e-133 484.0
36 TraesCS5A01G343700 chr6A 92.105 76 3 3 351 425 20768464 20768391 1.190000e-18 104.0
37 TraesCS5A01G343700 chr6A 92.105 76 3 3 351 425 20801181 20801108 1.190000e-18 104.0
38 TraesCS5A01G343700 chr7B 76.606 218 38 12 446 660 547947988 547947781 9.170000e-20 108.0
39 TraesCS5A01G343700 chr7B 92.105 76 3 3 351 425 544476452 544476525 1.190000e-18 104.0
40 TraesCS5A01G343700 chr6B 92.105 76 3 3 351 425 536107772 536107845 1.190000e-18 104.0
41 TraesCS5A01G343700 chr6B 90.000 80 4 4 351 428 20143100 20143023 1.530000e-17 100.0
42 TraesCS5A01G343700 chr3D 92.105 76 3 3 351 425 134084372 134084299 1.190000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G343700 chr5A 548238888 548241313 2425 True 4481.0 4481 100.0000 1 2426 1 chr5A.!!$R4 2425
1 TraesCS5A01G343700 chr5A 548230245 548230937 692 True 665.0 665 84.3970 820 1506 1 chr5A.!!$R3 686
2 TraesCS5A01G343700 chr5A 549153805 549154328 523 False 604.0 604 87.5000 974 1506 1 chr5A.!!$F2 532
3 TraesCS5A01G343700 chr5B 528524726 528525251 525 False 643.0 643 88.7830 982 1506 1 chr5B.!!$F1 524
4 TraesCS5A01G343700 chr5B 527049214 527049910 696 True 641.0 641 83.7340 820 1506 1 chr5B.!!$R2 686
5 TraesCS5A01G343700 chr5B 527058022 527065222 7200 True 383.2 1018 85.4272 463 2426 5 chr5B.!!$R3 1963
6 TraesCS5A01G343700 chr5B 528537423 528538529 1106 False 382.0 551 85.4920 870 2403 2 chr5B.!!$F2 1533
7 TraesCS5A01G343700 chr5D 434393168 434393853 685 True 675.0 675 84.6480 820 1506 1 chr5D.!!$R1 686
8 TraesCS5A01G343700 chr5D 434322154 434324134 1980 False 573.0 987 92.2080 117 2426 4 chr5D.!!$F3 2309
9 TraesCS5A01G343700 chr5D 434402263 434403498 1235 True 521.5 880 89.3450 426 1632 3 chr5D.!!$R2 1206
10 TraesCS5A01G343700 chr5D 435237618 435238511 893 False 433.0 675 88.4795 974 2350 2 chr5D.!!$F4 1376

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
806 931 0.035056 AGGCTCCAGCATACACCAAC 60.035 55.0 0.03 0.0 44.36 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1806 7872 0.03601 AGTTCACGGCATCAAGGAGG 60.036 55.0 0.0 0.0 0.0 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 8.463930 AAAAACTAAATGATCACAGGTTCAGA 57.536 30.769 0.00 0.00 0.00 3.27
34 35 8.463930 AAAACTAAATGATCACAGGTTCAGAA 57.536 30.769 0.00 0.00 0.00 3.02
35 36 8.463930 AAACTAAATGATCACAGGTTCAGAAA 57.536 30.769 0.00 0.00 0.00 2.52
36 37 7.440523 ACTAAATGATCACAGGTTCAGAAAC 57.559 36.000 0.00 0.00 34.46 2.78
37 38 6.998074 ACTAAATGATCACAGGTTCAGAAACA 59.002 34.615 0.00 0.00 37.10 2.83
38 39 6.713762 AAATGATCACAGGTTCAGAAACAA 57.286 33.333 0.00 0.00 37.10 2.83
39 40 6.713762 AATGATCACAGGTTCAGAAACAAA 57.286 33.333 0.00 0.00 37.10 2.83
40 41 6.713762 ATGATCACAGGTTCAGAAACAAAA 57.286 33.333 0.00 0.00 37.10 2.44
41 42 6.135290 TGATCACAGGTTCAGAAACAAAAG 57.865 37.500 0.00 0.00 37.10 2.27
42 43 4.981806 TCACAGGTTCAGAAACAAAAGG 57.018 40.909 0.00 0.00 37.10 3.11
43 44 4.594970 TCACAGGTTCAGAAACAAAAGGA 58.405 39.130 0.00 0.00 37.10 3.36
44 45 4.640201 TCACAGGTTCAGAAACAAAAGGAG 59.360 41.667 0.00 0.00 37.10 3.69
45 46 3.381590 ACAGGTTCAGAAACAAAAGGAGC 59.618 43.478 0.00 0.00 37.10 4.70
46 47 3.633986 CAGGTTCAGAAACAAAAGGAGCT 59.366 43.478 0.00 0.00 37.10 4.09
47 48 3.633986 AGGTTCAGAAACAAAAGGAGCTG 59.366 43.478 0.00 0.00 37.10 4.24
48 49 3.375642 GTTCAGAAACAAAAGGAGCTGC 58.624 45.455 0.00 0.00 35.36 5.25
49 50 2.653726 TCAGAAACAAAAGGAGCTGCA 58.346 42.857 8.35 0.00 0.00 4.41
50 51 2.358898 TCAGAAACAAAAGGAGCTGCAC 59.641 45.455 8.35 0.00 0.00 4.57
51 52 2.099592 CAGAAACAAAAGGAGCTGCACA 59.900 45.455 8.35 0.00 0.00 4.57
52 53 2.099756 AGAAACAAAAGGAGCTGCACAC 59.900 45.455 8.35 0.00 0.00 3.82
53 54 1.473258 AACAAAAGGAGCTGCACACA 58.527 45.000 8.35 0.00 0.00 3.72
54 55 1.696063 ACAAAAGGAGCTGCACACAT 58.304 45.000 8.35 0.00 0.00 3.21
55 56 1.338973 ACAAAAGGAGCTGCACACATG 59.661 47.619 8.35 1.56 0.00 3.21
56 57 1.338973 CAAAAGGAGCTGCACACATGT 59.661 47.619 8.35 0.00 0.00 3.21
57 58 1.242076 AAAGGAGCTGCACACATGTC 58.758 50.000 8.35 0.00 0.00 3.06
58 59 0.399454 AAGGAGCTGCACACATGTCT 59.601 50.000 8.35 0.00 0.00 3.41
59 60 1.269958 AGGAGCTGCACACATGTCTA 58.730 50.000 8.35 0.00 0.00 2.59
60 61 1.206610 AGGAGCTGCACACATGTCTAG 59.793 52.381 8.35 0.00 0.00 2.43
61 62 1.066573 GGAGCTGCACACATGTCTAGT 60.067 52.381 0.00 0.00 0.00 2.57
62 63 2.166459 GGAGCTGCACACATGTCTAGTA 59.834 50.000 0.00 0.00 0.00 1.82
63 64 3.181471 GGAGCTGCACACATGTCTAGTAT 60.181 47.826 0.00 0.00 0.00 2.12
64 65 4.038042 GGAGCTGCACACATGTCTAGTATA 59.962 45.833 0.00 0.00 0.00 1.47
65 66 4.938080 AGCTGCACACATGTCTAGTATAC 58.062 43.478 1.02 0.00 0.00 1.47
66 67 4.402474 AGCTGCACACATGTCTAGTATACA 59.598 41.667 5.50 0.00 0.00 2.29
67 68 5.069648 AGCTGCACACATGTCTAGTATACAT 59.930 40.000 5.50 0.00 38.08 2.29
68 69 6.265422 AGCTGCACACATGTCTAGTATACATA 59.735 38.462 5.50 0.00 35.82 2.29
69 70 6.363626 GCTGCACACATGTCTAGTATACATAC 59.636 42.308 5.50 0.77 35.82 2.39
70 71 7.341445 TGCACACATGTCTAGTATACATACA 57.659 36.000 5.50 6.54 35.82 2.29
71 72 7.951591 TGCACACATGTCTAGTATACATACAT 58.048 34.615 5.50 8.50 35.82 2.29
78 79 9.399403 CATGTCTAGTATACATACATGTGTGTC 57.601 37.037 28.67 16.27 41.46 3.67
79 80 8.514330 TGTCTAGTATACATACATGTGTGTCA 57.486 34.615 28.67 16.59 41.89 3.58
80 81 9.131791 TGTCTAGTATACATACATGTGTGTCAT 57.868 33.333 28.67 21.03 41.89 3.06
81 82 9.613957 GTCTAGTATACATACATGTGTGTCATC 57.386 37.037 28.67 19.18 41.89 2.92
82 83 9.349713 TCTAGTATACATACATGTGTGTCATCA 57.650 33.333 28.67 14.00 41.89 3.07
83 84 9.399403 CTAGTATACATACATGTGTGTCATCAC 57.601 37.037 28.67 20.58 41.89 3.06
96 97 4.431809 GTGTCATCACATTCAGAGAGAGG 58.568 47.826 0.00 0.00 43.37 3.69
97 98 4.081752 GTGTCATCACATTCAGAGAGAGGT 60.082 45.833 0.00 0.00 43.37 3.85
98 99 4.529769 TGTCATCACATTCAGAGAGAGGTT 59.470 41.667 0.00 0.00 0.00 3.50
99 100 5.012458 TGTCATCACATTCAGAGAGAGGTTT 59.988 40.000 0.00 0.00 0.00 3.27
100 101 5.580297 GTCATCACATTCAGAGAGAGGTTTC 59.420 44.000 0.00 0.00 0.00 2.78
101 102 4.543590 TCACATTCAGAGAGAGGTTTCC 57.456 45.455 0.00 0.00 0.00 3.13
102 103 4.163427 TCACATTCAGAGAGAGGTTTCCT 58.837 43.478 0.00 0.00 36.03 3.36
103 104 4.594920 TCACATTCAGAGAGAGGTTTCCTT 59.405 41.667 0.00 0.00 31.76 3.36
104 105 4.934602 CACATTCAGAGAGAGGTTTCCTTC 59.065 45.833 0.00 0.00 31.76 3.46
105 106 4.843516 ACATTCAGAGAGAGGTTTCCTTCT 59.156 41.667 0.00 0.00 31.76 2.85
106 107 5.046663 ACATTCAGAGAGAGGTTTCCTTCTC 60.047 44.000 14.25 14.25 37.70 2.87
107 108 4.119556 TCAGAGAGAGGTTTCCTTCTCA 57.880 45.455 19.48 7.03 38.75 3.27
108 109 4.085733 TCAGAGAGAGGTTTCCTTCTCAG 58.914 47.826 19.48 15.16 38.75 3.35
109 110 3.831911 CAGAGAGAGGTTTCCTTCTCAGT 59.168 47.826 19.48 7.03 38.75 3.41
110 111 4.283212 CAGAGAGAGGTTTCCTTCTCAGTT 59.717 45.833 19.48 6.60 38.75 3.16
111 112 4.526650 AGAGAGAGGTTTCCTTCTCAGTTC 59.473 45.833 19.48 10.02 38.75 3.01
112 113 4.227197 AGAGAGGTTTCCTTCTCAGTTCA 58.773 43.478 4.91 0.00 33.43 3.18
113 114 4.283212 AGAGAGGTTTCCTTCTCAGTTCAG 59.717 45.833 4.91 0.00 33.43 3.02
114 115 3.326297 AGAGGTTTCCTTCTCAGTTCAGG 59.674 47.826 0.00 0.00 31.76 3.86
115 116 3.318313 AGGTTTCCTTCTCAGTTCAGGA 58.682 45.455 0.00 0.00 34.72 3.86
149 150 9.747898 AATATTTGTGTCTGAAACCCAACTATA 57.252 29.630 0.00 0.00 26.77 1.31
161 162 7.175990 TGAAACCCAACTATAACAGGAAACATC 59.824 37.037 0.00 0.00 0.00 3.06
198 200 2.210116 GCATACATACGGAACCCAGTG 58.790 52.381 0.00 0.00 0.00 3.66
227 229 1.736645 CCAACACACGGTAGAGGCG 60.737 63.158 0.00 0.00 0.00 5.52
229 231 0.241749 CAACACACGGTAGAGGCGTA 59.758 55.000 0.00 0.00 0.00 4.42
321 323 3.580458 AGGTCTTGTTCTAGTCATGTGCT 59.420 43.478 0.00 0.00 0.00 4.40
363 365 5.749462 ACTCCCTCTGGAATAATGAACAAG 58.251 41.667 0.00 0.00 41.17 3.16
370 372 6.338146 TCTGGAATAATGAACAAGTACTCCG 58.662 40.000 0.00 0.00 0.00 4.63
371 373 5.424757 TGGAATAATGAACAAGTACTCCGG 58.575 41.667 0.00 0.00 0.00 5.14
372 374 5.046159 TGGAATAATGAACAAGTACTCCGGT 60.046 40.000 0.00 0.00 0.00 5.28
373 375 6.154877 TGGAATAATGAACAAGTACTCCGGTA 59.845 38.462 0.00 0.00 0.00 4.02
374 376 7.147620 TGGAATAATGAACAAGTACTCCGGTAT 60.148 37.037 0.00 0.00 0.00 2.73
375 377 7.170998 GGAATAATGAACAAGTACTCCGGTATG 59.829 40.741 0.00 0.00 0.00 2.39
376 378 3.241067 TGAACAAGTACTCCGGTATGC 57.759 47.619 0.00 0.00 0.00 3.14
377 379 2.563620 TGAACAAGTACTCCGGTATGCA 59.436 45.455 0.00 0.00 0.00 3.96
378 380 3.196901 TGAACAAGTACTCCGGTATGCAT 59.803 43.478 3.79 3.79 0.00 3.96
379 381 3.454371 ACAAGTACTCCGGTATGCATC 57.546 47.619 0.19 0.00 0.00 3.91
380 382 2.223735 ACAAGTACTCCGGTATGCATCG 60.224 50.000 0.19 0.67 0.00 3.84
381 383 0.314302 AGTACTCCGGTATGCATCGC 59.686 55.000 0.19 0.00 0.00 4.58
382 384 0.666577 GTACTCCGGTATGCATCGCC 60.667 60.000 0.19 6.29 0.00 5.54
383 385 1.812686 TACTCCGGTATGCATCGCCC 61.813 60.000 0.19 0.65 0.00 6.13
384 386 3.157949 TCCGGTATGCATCGCCCA 61.158 61.111 0.19 0.00 0.00 5.36
385 387 2.666190 CCGGTATGCATCGCCCAG 60.666 66.667 0.19 0.00 0.00 4.45
386 388 2.421314 CGGTATGCATCGCCCAGA 59.579 61.111 0.19 0.00 0.00 3.86
387 389 1.004560 CGGTATGCATCGCCCAGAT 60.005 57.895 0.19 0.00 41.01 2.90
394 396 2.827423 ATCGCCCAGATGCAGAGG 59.173 61.111 0.00 0.00 38.36 3.69
395 397 3.472943 ATCGCCCAGATGCAGAGGC 62.473 63.158 8.59 8.59 42.18 4.70
398 400 4.559063 CCCAGATGCAGAGGCCGG 62.559 72.222 0.00 0.00 40.13 6.13
399 401 4.559063 CCAGATGCAGAGGCCGGG 62.559 72.222 2.18 0.00 40.13 5.73
400 402 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
406 408 3.866582 CAGAGGCCGGGGGTCATC 61.867 72.222 2.18 0.00 0.00 2.92
419 421 4.586306 GGGGTCATCCTCCTTTTCTAAA 57.414 45.455 0.00 0.00 35.33 1.85
420 422 4.930696 GGGGTCATCCTCCTTTTCTAAAA 58.069 43.478 0.00 0.00 35.33 1.52
421 423 5.330233 GGGGTCATCCTCCTTTTCTAAAAA 58.670 41.667 0.00 0.00 35.33 1.94
492 494 2.824936 TGCCGGAAATTGAACACATCAT 59.175 40.909 5.05 0.00 38.03 2.45
525 636 2.376032 GCACGAGCTTTTCAACTGAAC 58.624 47.619 0.00 0.00 37.91 3.18
589 700 7.563888 ACATTATCATGACACTCCAATCAAG 57.436 36.000 0.00 0.00 34.11 3.02
608 719 9.827411 CAATCAAGAGAAGCACATCAATATATG 57.173 33.333 0.00 0.00 0.00 1.78
720 845 0.105964 TCGACACACCTCTTGTTGGG 59.894 55.000 0.00 0.00 35.67 4.12
725 850 1.125633 ACACCTCTTGTTGGGTACGT 58.874 50.000 0.00 0.00 33.09 3.57
745 870 4.089239 TTCGGTATGGCAGCCGCA 62.089 61.111 23.07 13.49 46.79 5.69
806 931 0.035056 AGGCTCCAGCATACACCAAC 60.035 55.000 0.03 0.00 44.36 3.77
807 932 0.322456 GGCTCCAGCATACACCAACA 60.322 55.000 0.03 0.00 44.36 3.33
808 933 1.683011 GGCTCCAGCATACACCAACAT 60.683 52.381 0.03 0.00 44.36 2.71
896 1073 4.210331 CCTGGCCTATAAATTCAGCAAGT 58.790 43.478 3.32 0.00 0.00 3.16
1096 1293 1.466167 CGGTGTCAGCCAAAGAAGATG 59.534 52.381 0.00 0.00 0.00 2.90
1203 1400 1.153901 CAGCACGACGGTATTCGGT 60.154 57.895 0.00 0.00 43.58 4.69
1253 1450 4.228097 CTTTGCGAGCGATGGCGG 62.228 66.667 2.58 0.00 46.35 6.13
1259 1456 2.356793 GAGCGATGGCGGGATCAG 60.357 66.667 0.00 0.00 46.35 2.90
1356 5499 2.435437 TGCATTGCTGAGCTCTATGGTA 59.565 45.455 16.19 0.00 0.00 3.25
1400 5598 2.028112 GTGTGATGCCTACTGTTGGAGA 60.028 50.000 12.54 0.00 0.00 3.71
1482 7546 5.116180 TGTCTTCTGTCTTGTGTAGTTTGG 58.884 41.667 0.00 0.00 0.00 3.28
1513 7577 9.775854 ATAGCGTAAGATAGTTAGACAGTAGAA 57.224 33.333 0.00 0.00 44.00 2.10
1514 7578 8.680039 AGCGTAAGATAGTTAGACAGTAGAAT 57.320 34.615 0.00 0.00 43.02 2.40
1515 7579 9.122779 AGCGTAAGATAGTTAGACAGTAGAATT 57.877 33.333 0.00 0.00 43.02 2.17
1553 7617 2.233431 AGACAGCAGAAACTAGGAGCAG 59.767 50.000 0.00 0.00 0.00 4.24
1575 7640 9.799106 AGCAGGAAAATTGTATATATAGCAACT 57.201 29.630 8.82 0.00 0.00 3.16
1576 7641 9.831737 GCAGGAAAATTGTATATATAGCAACTG 57.168 33.333 8.82 10.83 0.00 3.16
1636 7702 4.931002 CAGTATGCATTGTTCTTTTTGGGG 59.069 41.667 3.54 0.00 0.00 4.96
1639 7705 4.494091 TGCATTGTTCTTTTTGGGGAAA 57.506 36.364 0.00 0.00 0.00 3.13
1640 7706 4.848357 TGCATTGTTCTTTTTGGGGAAAA 58.152 34.783 0.00 0.00 35.94 2.29
1641 7707 4.637977 TGCATTGTTCTTTTTGGGGAAAAC 59.362 37.500 0.00 0.00 33.78 2.43
1642 7708 4.260579 GCATTGTTCTTTTTGGGGAAAACG 60.261 41.667 0.00 0.00 33.78 3.60
1643 7709 2.894902 TGTTCTTTTTGGGGAAAACGC 58.105 42.857 0.00 0.00 33.78 4.84
1644 7710 2.233922 TGTTCTTTTTGGGGAAAACGCA 59.766 40.909 0.00 0.00 40.66 5.24
1650 7716 2.510664 TGGGGAAAACGCAAAAGCT 58.489 47.368 0.00 0.00 39.30 3.74
1651 7717 0.827368 TGGGGAAAACGCAAAAGCTT 59.173 45.000 0.00 0.00 39.30 3.74
1652 7718 1.208293 TGGGGAAAACGCAAAAGCTTT 59.792 42.857 5.69 5.69 39.30 3.51
1653 7719 1.597195 GGGGAAAACGCAAAAGCTTTG 59.403 47.619 13.54 8.26 0.00 2.77
1654 7720 1.003972 GGGAAAACGCAAAAGCTTTGC 60.004 47.619 13.54 16.43 41.71 3.68
1662 7728 3.590720 GCAAAAGCTTTGCGTTTCATT 57.409 38.095 13.54 0.00 38.06 2.57
1663 7729 3.282428 GCAAAAGCTTTGCGTTTCATTG 58.718 40.909 13.54 4.93 38.06 2.82
1664 7730 3.242381 GCAAAAGCTTTGCGTTTCATTGT 60.242 39.130 13.54 0.00 38.06 2.71
1665 7731 4.026145 GCAAAAGCTTTGCGTTTCATTGTA 60.026 37.500 13.54 0.00 38.06 2.41
1666 7732 5.333263 GCAAAAGCTTTGCGTTTCATTGTAT 60.333 36.000 13.54 0.00 38.06 2.29
1667 7733 6.648502 CAAAAGCTTTGCGTTTCATTGTATT 58.351 32.000 13.54 0.00 38.06 1.89
1668 7734 5.827568 AAGCTTTGCGTTTCATTGTATTG 57.172 34.783 0.00 0.00 0.00 1.90
1669 7735 5.119931 AGCTTTGCGTTTCATTGTATTGA 57.880 34.783 0.00 0.00 0.00 2.57
1670 7736 5.527951 AGCTTTGCGTTTCATTGTATTGAA 58.472 33.333 0.00 0.00 33.89 2.69
1671 7737 5.630680 AGCTTTGCGTTTCATTGTATTGAAG 59.369 36.000 0.00 0.00 36.97 3.02
1672 7738 5.629020 GCTTTGCGTTTCATTGTATTGAAGA 59.371 36.000 0.00 0.00 36.97 2.87
1673 7739 6.183359 GCTTTGCGTTTCATTGTATTGAAGAG 60.183 38.462 0.00 0.00 36.97 2.85
1674 7740 6.552859 TTGCGTTTCATTGTATTGAAGAGA 57.447 33.333 0.00 0.00 36.97 3.10
1675 7741 6.552859 TGCGTTTCATTGTATTGAAGAGAA 57.447 33.333 0.00 0.00 36.97 2.87
1676 7742 6.964908 TGCGTTTCATTGTATTGAAGAGAAA 58.035 32.000 0.00 0.00 36.97 2.52
1677 7743 7.077605 TGCGTTTCATTGTATTGAAGAGAAAG 58.922 34.615 0.00 0.00 36.97 2.62
1678 7744 7.041440 TGCGTTTCATTGTATTGAAGAGAAAGA 60.041 33.333 0.00 0.00 36.97 2.52
1679 7745 7.479916 GCGTTTCATTGTATTGAAGAGAAAGAG 59.520 37.037 0.00 0.00 36.97 2.85
1680 7746 8.499162 CGTTTCATTGTATTGAAGAGAAAGAGT 58.501 33.333 0.00 0.00 36.97 3.24
1681 7747 9.604626 GTTTCATTGTATTGAAGAGAAAGAGTG 57.395 33.333 0.00 0.00 36.97 3.51
1682 7748 8.908786 TTCATTGTATTGAAGAGAAAGAGTGT 57.091 30.769 0.00 0.00 32.07 3.55
1683 7749 8.908786 TCATTGTATTGAAGAGAAAGAGTGTT 57.091 30.769 0.00 0.00 0.00 3.32
1684 7750 9.342308 TCATTGTATTGAAGAGAAAGAGTGTTT 57.658 29.630 0.00 0.00 0.00 2.83
1685 7751 9.956720 CATTGTATTGAAGAGAAAGAGTGTTTT 57.043 29.630 0.00 0.00 0.00 2.43
1693 7759 9.607988 TGAAGAGAAAGAGTGTTTTATGTTACA 57.392 29.630 0.00 0.00 0.00 2.41
1695 7761 9.614792 AAGAGAAAGAGTGTTTTATGTTACAGT 57.385 29.630 0.00 0.00 0.00 3.55
1696 7762 9.262358 AGAGAAAGAGTGTTTTATGTTACAGTC 57.738 33.333 0.00 0.00 42.40 3.51
1697 7763 8.379457 AGAAAGAGTGTTTTATGTTACAGTCC 57.621 34.615 0.00 0.00 42.85 3.85
1698 7764 8.211629 AGAAAGAGTGTTTTATGTTACAGTCCT 58.788 33.333 0.00 0.00 42.85 3.85
1699 7765 7.964604 AAGAGTGTTTTATGTTACAGTCCTC 57.035 36.000 0.00 0.00 42.85 3.71
1700 7766 6.465084 AGAGTGTTTTATGTTACAGTCCTCC 58.535 40.000 0.00 0.00 42.85 4.30
1701 7767 6.270231 AGAGTGTTTTATGTTACAGTCCTCCT 59.730 38.462 0.00 0.00 42.85 3.69
1702 7768 7.453752 AGAGTGTTTTATGTTACAGTCCTCCTA 59.546 37.037 0.00 0.00 42.85 2.94
1703 7769 7.612677 AGTGTTTTATGTTACAGTCCTCCTAG 58.387 38.462 0.00 0.00 0.00 3.02
1704 7770 6.817140 GTGTTTTATGTTACAGTCCTCCTAGG 59.183 42.308 0.82 0.82 36.46 3.02
1705 7771 6.727231 TGTTTTATGTTACAGTCCTCCTAGGA 59.273 38.462 11.98 11.98 43.43 2.94
1706 7772 7.093465 TGTTTTATGTTACAGTCCTCCTAGGAG 60.093 40.741 29.27 29.27 46.90 3.69
1717 7783 3.651803 CTCCTAGGAGGCGAATTACAG 57.348 52.381 28.68 1.35 38.51 2.74
1718 7784 2.959707 CTCCTAGGAGGCGAATTACAGT 59.040 50.000 28.68 0.00 38.51 3.55
1719 7785 2.957006 TCCTAGGAGGCGAATTACAGTC 59.043 50.000 7.62 0.00 34.61 3.51
1720 7786 2.693591 CCTAGGAGGCGAATTACAGTCA 59.306 50.000 1.05 0.00 0.00 3.41
1721 7787 2.969628 AGGAGGCGAATTACAGTCAG 57.030 50.000 0.00 0.00 0.00 3.51
1722 7788 1.482593 AGGAGGCGAATTACAGTCAGG 59.517 52.381 0.00 0.00 0.00 3.86
1723 7789 1.473434 GGAGGCGAATTACAGTCAGGG 60.473 57.143 0.00 0.00 0.00 4.45
1724 7790 0.541863 AGGCGAATTACAGTCAGGGG 59.458 55.000 0.00 0.00 0.00 4.79
1725 7791 0.539986 GGCGAATTACAGTCAGGGGA 59.460 55.000 0.00 0.00 0.00 4.81
1726 7792 1.653151 GCGAATTACAGTCAGGGGAC 58.347 55.000 0.00 0.00 44.66 4.46
1727 7793 1.066430 GCGAATTACAGTCAGGGGACA 60.066 52.381 0.00 0.00 46.80 4.02
1728 7794 2.618053 CGAATTACAGTCAGGGGACAC 58.382 52.381 0.00 0.00 46.80 3.67
1729 7795 2.618053 GAATTACAGTCAGGGGACACG 58.382 52.381 0.00 0.00 46.80 4.49
1730 7796 1.933021 ATTACAGTCAGGGGACACGA 58.067 50.000 0.00 0.00 46.80 4.35
1731 7797 1.254026 TTACAGTCAGGGGACACGAG 58.746 55.000 0.00 0.00 46.80 4.18
1732 7798 1.248785 TACAGTCAGGGGACACGAGC 61.249 60.000 0.00 0.00 46.80 5.03
1733 7799 2.118513 AGTCAGGGGACACGAGCT 59.881 61.111 0.00 0.00 46.80 4.09
1734 7800 0.965866 CAGTCAGGGGACACGAGCTA 60.966 60.000 0.00 0.00 46.80 3.32
1735 7801 0.681564 AGTCAGGGGACACGAGCTAG 60.682 60.000 0.00 0.00 46.80 3.42
1736 7802 0.966370 GTCAGGGGACACGAGCTAGT 60.966 60.000 0.00 0.00 43.73 2.57
1737 7803 0.965866 TCAGGGGACACGAGCTAGTG 60.966 60.000 23.45 23.45 46.83 2.74
1738 7804 2.184579 GGGGACACGAGCTAGTGC 59.815 66.667 24.74 17.20 45.45 4.40
1739 7805 2.646175 GGGGACACGAGCTAGTGCA 61.646 63.158 24.74 0.00 45.45 4.57
1740 7806 1.446272 GGGACACGAGCTAGTGCAC 60.446 63.158 24.74 18.40 45.45 4.57
1745 7811 2.202623 CGAGCTAGTGCACGTCCC 60.203 66.667 12.01 1.39 45.56 4.46
1746 7812 2.970639 GAGCTAGTGCACGTCCCA 59.029 61.111 12.01 0.00 42.74 4.37
1747 7813 1.153745 GAGCTAGTGCACGTCCCAG 60.154 63.158 12.01 6.18 42.74 4.45
1748 7814 2.125512 GCTAGTGCACGTCCCAGG 60.126 66.667 12.01 0.00 39.41 4.45
1749 7815 2.943978 GCTAGTGCACGTCCCAGGT 61.944 63.158 12.01 0.00 39.41 4.00
1750 7816 1.215647 CTAGTGCACGTCCCAGGTC 59.784 63.158 12.01 0.00 0.00 3.85
1751 7817 2.543687 CTAGTGCACGTCCCAGGTCG 62.544 65.000 12.01 1.71 0.00 4.79
1761 7827 4.410400 CCAGGTCGGGGGCAAGAC 62.410 72.222 0.00 0.00 36.70 3.01
1762 7828 3.322466 CAGGTCGGGGGCAAGACT 61.322 66.667 6.28 0.00 37.52 3.24
1763 7829 1.987855 CAGGTCGGGGGCAAGACTA 60.988 63.158 6.28 0.00 37.52 2.59
1764 7830 1.988406 AGGTCGGGGGCAAGACTAC 60.988 63.158 6.28 0.00 37.52 2.73
1765 7831 1.988406 GGTCGGGGGCAAGACTACT 60.988 63.158 6.28 0.00 37.52 2.57
1766 7832 1.516423 GTCGGGGGCAAGACTACTC 59.484 63.158 0.00 0.00 34.74 2.59
1767 7833 0.971447 GTCGGGGGCAAGACTACTCT 60.971 60.000 0.00 0.00 34.74 3.24
1768 7834 0.970937 TCGGGGGCAAGACTACTCTG 60.971 60.000 0.00 0.00 0.00 3.35
1769 7835 0.970937 CGGGGGCAAGACTACTCTGA 60.971 60.000 0.00 0.00 0.00 3.27
1770 7836 0.827368 GGGGGCAAGACTACTCTGAG 59.173 60.000 2.45 2.45 0.00 3.35
1771 7837 0.176910 GGGGCAAGACTACTCTGAGC 59.823 60.000 4.19 0.00 0.00 4.26
1772 7838 0.176910 GGGCAAGACTACTCTGAGCC 59.823 60.000 4.19 0.00 43.31 4.70
1773 7839 0.176910 GGCAAGACTACTCTGAGCCC 59.823 60.000 4.19 0.00 40.38 5.19
1774 7840 0.898320 GCAAGACTACTCTGAGCCCA 59.102 55.000 4.19 0.00 0.00 5.36
1775 7841 1.134848 GCAAGACTACTCTGAGCCCAG 60.135 57.143 4.19 2.47 41.74 4.45
1776 7842 1.134848 CAAGACTACTCTGAGCCCAGC 60.135 57.143 4.19 0.00 40.20 4.85
1777 7843 0.040351 AGACTACTCTGAGCCCAGCA 59.960 55.000 4.19 0.00 40.20 4.41
1778 7844 0.459489 GACTACTCTGAGCCCAGCAG 59.541 60.000 4.19 0.00 40.20 4.24
1779 7845 1.143620 CTACTCTGAGCCCAGCAGC 59.856 63.158 4.19 0.00 40.20 5.25
1780 7846 2.625973 CTACTCTGAGCCCAGCAGCG 62.626 65.000 4.19 0.00 40.20 5.18
1797 7863 3.134127 GCCTGCCGTAGCCCAAAG 61.134 66.667 0.00 0.00 38.69 2.77
1798 7864 2.351276 CCTGCCGTAGCCCAAAGT 59.649 61.111 0.00 0.00 38.69 2.66
1799 7865 1.303317 CCTGCCGTAGCCCAAAGTT 60.303 57.895 0.00 0.00 38.69 2.66
1800 7866 0.893727 CCTGCCGTAGCCCAAAGTTT 60.894 55.000 0.00 0.00 38.69 2.66
1801 7867 0.240945 CTGCCGTAGCCCAAAGTTTG 59.759 55.000 8.73 8.73 38.69 2.93
1810 7876 2.658548 CCAAAGTTTGGCCTCCTCC 58.341 57.895 21.39 0.00 45.17 4.30
1811 7877 0.113190 CCAAAGTTTGGCCTCCTCCT 59.887 55.000 21.39 0.00 45.17 3.69
1812 7878 1.481242 CCAAAGTTTGGCCTCCTCCTT 60.481 52.381 21.39 0.00 45.17 3.36
1813 7879 1.615392 CAAAGTTTGGCCTCCTCCTTG 59.385 52.381 3.32 0.00 0.00 3.61
1814 7880 1.149101 AAGTTTGGCCTCCTCCTTGA 58.851 50.000 3.32 0.00 0.00 3.02
1815 7881 1.376649 AGTTTGGCCTCCTCCTTGAT 58.623 50.000 3.32 0.00 0.00 2.57
1816 7882 1.005215 AGTTTGGCCTCCTCCTTGATG 59.995 52.381 3.32 0.00 0.00 3.07
1817 7883 0.323725 TTTGGCCTCCTCCTTGATGC 60.324 55.000 3.32 0.00 0.00 3.91
1818 7884 2.194326 GGCCTCCTCCTTGATGCC 59.806 66.667 0.00 0.00 38.58 4.40
1819 7885 2.203126 GCCTCCTCCTTGATGCCG 60.203 66.667 0.00 0.00 0.00 5.69
1820 7886 3.036429 GCCTCCTCCTTGATGCCGT 62.036 63.158 0.00 0.00 0.00 5.68
1821 7887 1.153289 CCTCCTCCTTGATGCCGTG 60.153 63.158 0.00 0.00 0.00 4.94
1822 7888 1.617018 CCTCCTCCTTGATGCCGTGA 61.617 60.000 0.00 0.00 0.00 4.35
1823 7889 0.250234 CTCCTCCTTGATGCCGTGAA 59.750 55.000 0.00 0.00 0.00 3.18
1824 7890 0.036388 TCCTCCTTGATGCCGTGAAC 60.036 55.000 0.00 0.00 0.00 3.18
1825 7891 0.036010 CCTCCTTGATGCCGTGAACT 60.036 55.000 0.00 0.00 0.00 3.01
1826 7892 1.207089 CCTCCTTGATGCCGTGAACTA 59.793 52.381 0.00 0.00 0.00 2.24
1827 7893 2.544685 CTCCTTGATGCCGTGAACTAG 58.455 52.381 0.00 0.00 0.00 2.57
1828 7894 1.009829 CCTTGATGCCGTGAACTAGC 58.990 55.000 0.00 0.00 0.00 3.42
1829 7895 0.647410 CTTGATGCCGTGAACTAGCG 59.353 55.000 0.00 0.00 0.00 4.26
1830 7896 0.037697 TTGATGCCGTGAACTAGCGT 60.038 50.000 0.00 0.00 0.00 5.07
1831 7897 0.457853 TGATGCCGTGAACTAGCGTC 60.458 55.000 7.31 7.31 41.82 5.19
1832 7898 1.146358 GATGCCGTGAACTAGCGTCC 61.146 60.000 0.00 0.00 36.70 4.79
1833 7899 2.879462 GCCGTGAACTAGCGTCCG 60.879 66.667 0.00 0.00 0.00 4.79
1834 7900 2.202570 CCGTGAACTAGCGTCCGG 60.203 66.667 0.00 0.00 0.00 5.14
1835 7901 2.693762 CCGTGAACTAGCGTCCGGA 61.694 63.158 0.00 0.00 37.66 5.14
1836 7902 1.432251 CGTGAACTAGCGTCCGGAT 59.568 57.895 7.81 0.00 0.00 4.18
1837 7903 0.866061 CGTGAACTAGCGTCCGGATG 60.866 60.000 19.87 19.87 0.00 3.51
1838 7904 0.527817 GTGAACTAGCGTCCGGATGG 60.528 60.000 24.85 13.14 0.00 3.51
1839 7905 0.681887 TGAACTAGCGTCCGGATGGA 60.682 55.000 24.85 2.03 43.88 3.41
1847 7913 3.781307 TCCGGATGGAAGGGCGTG 61.781 66.667 0.00 0.00 42.85 5.34
1850 7916 4.778143 GGATGGAAGGGCGTGCGT 62.778 66.667 0.00 0.00 0.00 5.24
1851 7917 3.195698 GATGGAAGGGCGTGCGTC 61.196 66.667 0.00 0.00 0.00 5.19
1855 7921 4.072088 GAAGGGCGTGCGTCGTTG 62.072 66.667 8.82 0.00 42.13 4.10
1856 7922 4.595538 AAGGGCGTGCGTCGTTGA 62.596 61.111 3.35 0.00 42.13 3.18
1857 7923 4.595538 AGGGCGTGCGTCGTTGAA 62.596 61.111 0.00 0.00 42.13 2.69
1858 7924 4.072088 GGGCGTGCGTCGTTGAAG 62.072 66.667 0.00 0.00 42.13 3.02
1859 7925 3.033764 GGCGTGCGTCGTTGAAGA 61.034 61.111 0.00 0.00 42.13 2.87
1860 7926 2.167918 GCGTGCGTCGTTGAAGAC 59.832 61.111 0.00 0.00 42.13 3.01
1878 7944 4.771684 GCAATCGTTGCGATGCTT 57.228 50.000 4.75 0.00 46.30 3.91
1879 7945 2.559123 GCAATCGTTGCGATGCTTC 58.441 52.632 4.75 0.00 46.30 3.86
1880 7946 0.863119 GCAATCGTTGCGATGCTTCC 60.863 55.000 4.75 0.00 46.30 3.46
1881 7947 0.447406 CAATCGTTGCGATGCTTCCA 59.553 50.000 4.75 0.00 46.30 3.53
1882 7948 0.729116 AATCGTTGCGATGCTTCCAG 59.271 50.000 4.75 0.00 46.30 3.86
1883 7949 0.108186 ATCGTTGCGATGCTTCCAGA 60.108 50.000 3.08 0.00 45.24 3.86
1884 7950 0.108186 TCGTTGCGATGCTTCCAGAT 60.108 50.000 0.00 0.00 0.00 2.90
1885 7951 0.302890 CGTTGCGATGCTTCCAGATC 59.697 55.000 0.00 0.00 0.00 2.75
1886 7952 1.372582 GTTGCGATGCTTCCAGATCA 58.627 50.000 0.00 0.00 0.00 2.92
1887 7953 1.945394 GTTGCGATGCTTCCAGATCAT 59.055 47.619 0.00 0.00 0.00 2.45
1888 7954 1.875009 TGCGATGCTTCCAGATCATC 58.125 50.000 0.00 0.00 34.74 2.92
1889 7955 1.155042 GCGATGCTTCCAGATCATCC 58.845 55.000 0.00 0.00 34.63 3.51
1890 7956 1.541889 GCGATGCTTCCAGATCATCCA 60.542 52.381 0.00 0.00 34.63 3.41
1891 7957 2.414806 CGATGCTTCCAGATCATCCAG 58.585 52.381 0.00 0.00 34.63 3.86
1892 7958 2.780714 GATGCTTCCAGATCATCCAGG 58.219 52.381 0.00 0.00 32.60 4.45
1893 7959 1.883678 TGCTTCCAGATCATCCAGGA 58.116 50.000 0.00 0.00 0.00 3.86
1894 7960 1.767088 TGCTTCCAGATCATCCAGGAG 59.233 52.381 0.00 0.00 0.00 3.69
1895 7961 1.072015 GCTTCCAGATCATCCAGGAGG 59.928 57.143 0.00 0.00 0.00 4.30
1896 7962 2.406559 CTTCCAGATCATCCAGGAGGT 58.593 52.381 0.00 0.00 35.89 3.85
1897 7963 3.581101 CTTCCAGATCATCCAGGAGGTA 58.419 50.000 0.00 0.00 35.89 3.08
1898 7964 3.706389 TCCAGATCATCCAGGAGGTAA 57.294 47.619 0.00 0.00 35.89 2.85
1899 7965 3.581101 TCCAGATCATCCAGGAGGTAAG 58.419 50.000 0.00 0.00 35.89 2.34
1900 7966 3.207549 TCCAGATCATCCAGGAGGTAAGA 59.792 47.826 0.00 0.00 35.89 2.10
1901 7967 3.969976 CCAGATCATCCAGGAGGTAAGAA 59.030 47.826 0.00 0.00 35.89 2.52
1902 7968 4.040217 CCAGATCATCCAGGAGGTAAGAAG 59.960 50.000 0.00 0.00 35.89 2.85
1903 7969 4.653341 CAGATCATCCAGGAGGTAAGAAGT 59.347 45.833 0.00 0.00 35.89 3.01
1904 7970 4.653341 AGATCATCCAGGAGGTAAGAAGTG 59.347 45.833 0.00 0.00 35.89 3.16
1905 7971 3.791320 TCATCCAGGAGGTAAGAAGTGT 58.209 45.455 0.00 0.00 35.89 3.55
1906 7972 3.769844 TCATCCAGGAGGTAAGAAGTGTC 59.230 47.826 0.00 0.00 35.89 3.67
1907 7973 2.168496 TCCAGGAGGTAAGAAGTGTCG 58.832 52.381 0.00 0.00 35.89 4.35
1908 7974 1.404315 CCAGGAGGTAAGAAGTGTCGC 60.404 57.143 0.00 0.00 0.00 5.19
1909 7975 0.526662 AGGAGGTAAGAAGTGTCGCG 59.473 55.000 0.00 0.00 0.00 5.87
1910 7976 0.458025 GGAGGTAAGAAGTGTCGCGG 60.458 60.000 6.13 0.00 0.00 6.46
1911 7977 0.524862 GAGGTAAGAAGTGTCGCGGA 59.475 55.000 6.13 0.00 0.00 5.54
1912 7978 1.134560 GAGGTAAGAAGTGTCGCGGAT 59.865 52.381 6.13 0.00 0.00 4.18
1913 7979 1.135083 AGGTAAGAAGTGTCGCGGATG 60.135 52.381 6.13 0.00 0.00 3.51
1914 7980 0.645868 GTAAGAAGTGTCGCGGATGC 59.354 55.000 6.13 0.00 37.91 3.91
1915 7981 0.459585 TAAGAAGTGTCGCGGATGCC 60.460 55.000 6.13 0.00 38.08 4.40
1916 7982 2.434185 GAAGTGTCGCGGATGCCA 60.434 61.111 6.13 0.00 38.08 4.92
1917 7983 2.434884 AAGTGTCGCGGATGCCAG 60.435 61.111 6.13 0.00 38.08 4.85
1958 8024 3.410628 TGACCTGCCGGGCATCAT 61.411 61.111 24.10 10.95 45.79 2.45
1959 8025 2.903855 GACCTGCCGGGCATCATG 60.904 66.667 24.10 10.74 38.64 3.07
1971 8037 2.676632 GCATCATGCCACCAATCAAA 57.323 45.000 0.00 0.00 37.42 2.69
1972 8038 2.546778 GCATCATGCCACCAATCAAAG 58.453 47.619 0.00 0.00 37.42 2.77
1973 8039 2.166870 GCATCATGCCACCAATCAAAGA 59.833 45.455 0.00 0.00 37.42 2.52
1974 8040 3.737047 GCATCATGCCACCAATCAAAGAG 60.737 47.826 0.00 0.00 37.42 2.85
1975 8041 2.449464 TCATGCCACCAATCAAAGAGG 58.551 47.619 0.00 0.00 0.00 3.69
1976 8042 1.479323 CATGCCACCAATCAAAGAGGG 59.521 52.381 0.00 0.00 0.00 4.30
1977 8043 0.482446 TGCCACCAATCAAAGAGGGT 59.518 50.000 0.00 0.00 0.00 4.34
1978 8044 1.707989 TGCCACCAATCAAAGAGGGTA 59.292 47.619 0.00 0.00 31.05 3.69
1979 8045 2.290896 TGCCACCAATCAAAGAGGGTAG 60.291 50.000 0.00 0.00 31.05 3.18
1980 8046 2.369394 CCACCAATCAAAGAGGGTAGC 58.631 52.381 0.00 0.00 31.05 3.58
1981 8047 2.369394 CACCAATCAAAGAGGGTAGCC 58.631 52.381 1.60 1.60 31.05 3.93
1982 8048 2.025887 CACCAATCAAAGAGGGTAGCCT 60.026 50.000 14.79 14.79 31.05 4.58
1983 8049 2.239907 ACCAATCAAAGAGGGTAGCCTC 59.760 50.000 29.91 29.91 37.11 4.70
1984 8050 2.555199 CAATCAAAGAGGGTAGCCTCG 58.445 52.381 30.25 18.96 41.31 4.63
1985 8051 1.867363 ATCAAAGAGGGTAGCCTCGT 58.133 50.000 30.25 26.18 41.31 4.18
1986 8052 1.640917 TCAAAGAGGGTAGCCTCGTT 58.359 50.000 29.22 29.22 41.31 3.85
1987 8053 1.726853 CAAAGAGGGTAGCCTCGTTG 58.273 55.000 37.57 37.57 44.65 4.10
1988 8054 0.036294 AAAGAGGGTAGCCTCGTTGC 60.036 55.000 32.44 13.79 41.31 4.17
1989 8055 0.905337 AAGAGGGTAGCCTCGTTGCT 60.905 55.000 30.25 13.75 45.38 3.91
1990 8056 1.142097 GAGGGTAGCCTCGTTGCTC 59.858 63.158 24.47 1.66 41.68 4.26
1991 8057 2.202756 GGGTAGCCTCGTTGCTCG 60.203 66.667 2.95 0.00 41.68 5.03
1992 8058 2.202756 GGTAGCCTCGTTGCTCGG 60.203 66.667 4.76 0.00 41.68 4.63
1993 8059 2.202756 GTAGCCTCGTTGCTCGGG 60.203 66.667 4.76 0.00 41.68 5.14
2005 8071 4.785453 CTCGGGGGCCTGCAAGTC 62.785 72.222 0.84 0.00 0.00 3.01
2007 8073 4.431131 CGGGGGCCTGCAAGTCAT 62.431 66.667 0.84 0.00 0.00 3.06
2008 8074 2.757099 GGGGGCCTGCAAGTCATG 60.757 66.667 0.84 0.00 0.00 3.07
2016 8082 3.189921 GCAAGTCATGCGCATCCA 58.810 55.556 22.51 7.26 46.87 3.41
2017 8083 1.063649 GCAAGTCATGCGCATCCAG 59.936 57.895 22.51 10.17 46.87 3.86
2018 8084 1.725665 CAAGTCATGCGCATCCAGG 59.274 57.895 22.51 9.75 0.00 4.45
2019 8085 0.745486 CAAGTCATGCGCATCCAGGA 60.745 55.000 22.51 12.29 0.00 3.86
2020 8086 0.463295 AAGTCATGCGCATCCAGGAG 60.463 55.000 22.51 8.50 0.00 3.69
2021 8087 1.144716 GTCATGCGCATCCAGGAGA 59.855 57.895 22.51 11.06 0.00 3.71
2022 8088 0.879400 GTCATGCGCATCCAGGAGAG 60.879 60.000 22.51 6.85 0.00 3.20
2023 8089 1.597302 CATGCGCATCCAGGAGAGG 60.597 63.158 22.51 1.48 0.00 3.69
2024 8090 1.763655 ATGCGCATCCAGGAGAGGA 60.764 57.895 19.28 0.00 43.01 3.71
2026 8092 1.005156 GCGCATCCAGGAGAGGATC 60.005 63.158 0.30 0.00 45.16 3.36
2038 8104 2.026522 GAGGATCTCGGACCAGACG 58.973 63.158 0.00 0.00 0.00 4.18
2039 8105 0.748729 GAGGATCTCGGACCAGACGT 60.749 60.000 0.00 0.00 0.00 4.34
2040 8106 1.032657 AGGATCTCGGACCAGACGTG 61.033 60.000 0.00 0.00 0.00 4.49
2041 8107 1.226717 GATCTCGGACCAGACGTGC 60.227 63.158 0.00 0.00 0.00 5.34
2042 8108 2.615262 GATCTCGGACCAGACGTGCC 62.615 65.000 0.00 0.00 0.00 5.01
2043 8109 3.374402 CTCGGACCAGACGTGCCT 61.374 66.667 0.00 0.00 0.00 4.75
2044 8110 3.343788 CTCGGACCAGACGTGCCTC 62.344 68.421 0.00 0.00 0.00 4.70
2045 8111 4.778415 CGGACCAGACGTGCCTCG 62.778 72.222 0.00 0.00 46.00 4.63
2046 8112 3.371063 GGACCAGACGTGCCTCGA 61.371 66.667 0.00 0.00 42.86 4.04
2047 8113 2.179517 GACCAGACGTGCCTCGAG 59.820 66.667 5.13 5.13 42.86 4.04
2048 8114 2.282251 ACCAGACGTGCCTCGAGA 60.282 61.111 15.71 0.00 42.86 4.04
2049 8115 1.863662 GACCAGACGTGCCTCGAGAA 61.864 60.000 15.71 0.00 42.86 2.87
2050 8116 1.153939 CCAGACGTGCCTCGAGAAG 60.154 63.158 15.71 4.45 42.86 2.85
2061 8127 2.086054 CTCGAGAAGGAACACCCAAG 57.914 55.000 6.58 0.00 37.41 3.61
2062 8128 0.685097 TCGAGAAGGAACACCCAAGG 59.315 55.000 0.00 0.00 37.41 3.61
2063 8129 0.685097 CGAGAAGGAACACCCAAGGA 59.315 55.000 0.00 0.00 37.41 3.36
2064 8130 1.338200 CGAGAAGGAACACCCAAGGAG 60.338 57.143 0.00 0.00 37.41 3.69
2065 8131 1.003696 GAGAAGGAACACCCAAGGAGG 59.996 57.143 0.00 0.00 37.41 4.30
2066 8132 1.064825 GAAGGAACACCCAAGGAGGA 58.935 55.000 0.00 0.00 41.22 3.71
2079 8149 4.884164 CCCAAGGAGGATACATTTCAGTTC 59.116 45.833 0.00 0.00 41.22 3.01
2135 8205 6.320164 TGCAATTATTTTTAGGCATCGGTAGT 59.680 34.615 0.00 0.00 0.00 2.73
2161 8242 2.092429 TCCTGCTCCACAACAAGTTTCT 60.092 45.455 0.00 0.00 0.00 2.52
2162 8243 2.033801 CCTGCTCCACAACAAGTTTCTG 59.966 50.000 0.00 0.00 0.00 3.02
2196 8288 6.630071 TCATCTAAGCCAAGGCATTAAAAAC 58.370 36.000 14.40 0.00 44.88 2.43
2207 8299 7.388500 CCAAGGCATTAAAAACTTGTGAATCAT 59.612 33.333 12.45 0.00 38.84 2.45
2254 8346 9.354673 GGAACCATTTTAATGATGAATCCTCTA 57.645 33.333 4.07 0.00 38.70 2.43
2341 8436 3.117663 AGAAAGCAGGGTTTACTCCACAA 60.118 43.478 0.00 0.00 0.00 3.33
2353 8448 5.715434 TTACTCCACAAGTTTTAATGGGC 57.285 39.130 0.00 0.00 39.55 5.36
2360 8455 5.186797 CCACAAGTTTTAATGGGCATAAGGA 59.813 40.000 0.00 0.00 0.00 3.36
2367 8462 8.478066 AGTTTTAATGGGCATAAGGAAGATTTC 58.522 33.333 0.00 0.00 0.00 2.17
2413 8508 4.893424 TGGTTAACTGTCAAGCAAGAAC 57.107 40.909 5.42 0.00 30.91 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 8.463930 TCTGAACCTGTGATCATTTAGTTTTT 57.536 30.769 0.00 0.00 0.00 1.94
9 10 8.463930 TTCTGAACCTGTGATCATTTAGTTTT 57.536 30.769 0.00 0.00 0.00 2.43
10 11 8.352942 GTTTCTGAACCTGTGATCATTTAGTTT 58.647 33.333 0.00 0.00 0.00 2.66
11 12 7.502226 TGTTTCTGAACCTGTGATCATTTAGTT 59.498 33.333 0.00 0.74 34.80 2.24
12 13 6.998074 TGTTTCTGAACCTGTGATCATTTAGT 59.002 34.615 0.00 0.00 34.80 2.24
13 14 7.439157 TGTTTCTGAACCTGTGATCATTTAG 57.561 36.000 0.00 0.00 34.80 1.85
14 15 7.815840 TTGTTTCTGAACCTGTGATCATTTA 57.184 32.000 0.00 0.00 34.80 1.40
15 16 6.713762 TTGTTTCTGAACCTGTGATCATTT 57.286 33.333 0.00 0.00 34.80 2.32
16 17 6.713762 TTTGTTTCTGAACCTGTGATCATT 57.286 33.333 0.00 0.00 34.80 2.57
17 18 6.239120 CCTTTTGTTTCTGAACCTGTGATCAT 60.239 38.462 0.00 0.00 34.80 2.45
18 19 5.067674 CCTTTTGTTTCTGAACCTGTGATCA 59.932 40.000 0.00 0.00 34.80 2.92
19 20 5.299279 TCCTTTTGTTTCTGAACCTGTGATC 59.701 40.000 0.00 0.00 34.80 2.92
20 21 5.200483 TCCTTTTGTTTCTGAACCTGTGAT 58.800 37.500 0.00 0.00 34.80 3.06
21 22 4.594970 TCCTTTTGTTTCTGAACCTGTGA 58.405 39.130 0.00 0.00 34.80 3.58
22 23 4.734695 GCTCCTTTTGTTTCTGAACCTGTG 60.735 45.833 0.00 0.00 34.80 3.66
23 24 3.381590 GCTCCTTTTGTTTCTGAACCTGT 59.618 43.478 0.00 0.00 34.80 4.00
24 25 3.633986 AGCTCCTTTTGTTTCTGAACCTG 59.366 43.478 0.00 0.00 34.80 4.00
25 26 3.633986 CAGCTCCTTTTGTTTCTGAACCT 59.366 43.478 0.00 0.00 34.80 3.50
26 27 3.796844 GCAGCTCCTTTTGTTTCTGAACC 60.797 47.826 0.00 0.00 34.80 3.62
27 28 3.181487 TGCAGCTCCTTTTGTTTCTGAAC 60.181 43.478 0.00 0.00 36.29 3.18
28 29 3.023119 TGCAGCTCCTTTTGTTTCTGAA 58.977 40.909 0.00 0.00 0.00 3.02
29 30 2.358898 GTGCAGCTCCTTTTGTTTCTGA 59.641 45.455 0.00 0.00 0.00 3.27
30 31 2.099592 TGTGCAGCTCCTTTTGTTTCTG 59.900 45.455 0.00 0.00 0.00 3.02
31 32 2.099756 GTGTGCAGCTCCTTTTGTTTCT 59.900 45.455 0.00 0.00 0.00 2.52
32 33 2.159254 TGTGTGCAGCTCCTTTTGTTTC 60.159 45.455 0.00 0.00 0.00 2.78
33 34 1.824230 TGTGTGCAGCTCCTTTTGTTT 59.176 42.857 0.00 0.00 0.00 2.83
34 35 1.473258 TGTGTGCAGCTCCTTTTGTT 58.527 45.000 0.00 0.00 0.00 2.83
35 36 1.338973 CATGTGTGCAGCTCCTTTTGT 59.661 47.619 0.00 0.00 0.00 2.83
36 37 1.338973 ACATGTGTGCAGCTCCTTTTG 59.661 47.619 0.00 0.00 0.00 2.44
37 38 1.610522 GACATGTGTGCAGCTCCTTTT 59.389 47.619 1.15 0.00 0.00 2.27
38 39 1.202855 AGACATGTGTGCAGCTCCTTT 60.203 47.619 1.15 0.00 0.00 3.11
39 40 0.399454 AGACATGTGTGCAGCTCCTT 59.601 50.000 1.15 0.00 0.00 3.36
40 41 1.206610 CTAGACATGTGTGCAGCTCCT 59.793 52.381 1.15 0.00 0.00 3.69
41 42 1.066573 ACTAGACATGTGTGCAGCTCC 60.067 52.381 1.15 0.00 0.00 4.70
42 43 2.376808 ACTAGACATGTGTGCAGCTC 57.623 50.000 1.15 0.00 0.00 4.09
43 44 4.402474 TGTATACTAGACATGTGTGCAGCT 59.598 41.667 1.15 0.00 0.00 4.24
44 45 4.682787 TGTATACTAGACATGTGTGCAGC 58.317 43.478 1.15 0.00 0.00 5.25
45 46 7.425606 TGTATGTATACTAGACATGTGTGCAG 58.574 38.462 1.15 0.00 38.03 4.41
46 47 7.341445 TGTATGTATACTAGACATGTGTGCA 57.659 36.000 1.15 0.00 38.03 4.57
47 48 8.232497 CATGTATGTATACTAGACATGTGTGC 57.768 38.462 23.28 0.00 41.49 4.57
53 54 9.131791 TGACACACATGTATGTATACTAGACAT 57.868 33.333 10.31 7.99 39.95 3.06
54 55 8.514330 TGACACACATGTATGTATACTAGACA 57.486 34.615 10.31 0.00 39.95 3.41
55 56 9.613957 GATGACACACATGTATGTATACTAGAC 57.386 37.037 10.31 0.00 39.95 2.59
56 57 9.349713 TGATGACACACATGTATGTATACTAGA 57.650 33.333 10.31 0.00 39.95 2.43
57 58 9.399403 GTGATGACACACATGTATGTATACTAG 57.601 37.037 10.31 0.00 45.32 2.57
74 75 4.081752 ACCTCTCTCTGAATGTGATGACAC 60.082 45.833 0.00 0.00 46.09 3.67
75 76 4.092279 ACCTCTCTCTGAATGTGATGACA 58.908 43.478 0.00 0.00 36.22 3.58
76 77 4.734398 ACCTCTCTCTGAATGTGATGAC 57.266 45.455 0.00 0.00 0.00 3.06
77 78 5.337894 GGAAACCTCTCTCTGAATGTGATGA 60.338 44.000 0.00 0.00 0.00 2.92
78 79 4.874966 GGAAACCTCTCTCTGAATGTGATG 59.125 45.833 0.00 0.00 0.00 3.07
79 80 4.782156 AGGAAACCTCTCTCTGAATGTGAT 59.218 41.667 0.00 0.00 0.00 3.06
80 81 4.163427 AGGAAACCTCTCTCTGAATGTGA 58.837 43.478 0.00 0.00 0.00 3.58
81 82 4.550076 AGGAAACCTCTCTCTGAATGTG 57.450 45.455 0.00 0.00 0.00 3.21
82 83 4.843516 AGAAGGAAACCTCTCTCTGAATGT 59.156 41.667 0.00 0.00 30.89 2.71
83 84 5.046735 TGAGAAGGAAACCTCTCTCTGAATG 60.047 44.000 19.69 0.00 37.97 2.67
84 85 5.090139 TGAGAAGGAAACCTCTCTCTGAAT 58.910 41.667 19.69 0.00 37.97 2.57
85 86 4.483950 TGAGAAGGAAACCTCTCTCTGAA 58.516 43.478 19.69 7.38 37.97 3.02
86 87 4.085733 CTGAGAAGGAAACCTCTCTCTGA 58.914 47.826 19.69 5.06 38.01 3.27
87 88 3.831911 ACTGAGAAGGAAACCTCTCTCTG 59.168 47.826 20.41 20.41 39.47 3.35
88 89 4.126520 ACTGAGAAGGAAACCTCTCTCT 57.873 45.455 19.69 9.45 37.97 3.10
89 90 4.282195 TGAACTGAGAAGGAAACCTCTCTC 59.718 45.833 15.85 15.85 37.81 3.20
90 91 4.227197 TGAACTGAGAAGGAAACCTCTCT 58.773 43.478 0.00 0.00 32.76 3.10
91 92 4.562552 CCTGAACTGAGAAGGAAACCTCTC 60.563 50.000 0.00 0.00 32.43 3.20
92 93 3.326297 CCTGAACTGAGAAGGAAACCTCT 59.674 47.826 0.00 0.00 32.43 3.69
93 94 3.325135 TCCTGAACTGAGAAGGAAACCTC 59.675 47.826 1.78 0.00 37.16 3.85
94 95 3.318313 TCCTGAACTGAGAAGGAAACCT 58.682 45.455 1.78 0.00 37.16 3.50
95 96 3.771577 TCCTGAACTGAGAAGGAAACC 57.228 47.619 1.78 0.00 37.16 3.27
96 97 4.006319 CCATCCTGAACTGAGAAGGAAAC 58.994 47.826 7.23 0.00 43.20 2.78
97 98 3.652869 ACCATCCTGAACTGAGAAGGAAA 59.347 43.478 7.23 0.00 43.20 3.13
98 99 3.251484 ACCATCCTGAACTGAGAAGGAA 58.749 45.455 7.23 0.00 43.20 3.36
99 100 2.834549 GACCATCCTGAACTGAGAAGGA 59.165 50.000 5.93 5.93 44.06 3.36
100 101 2.093235 GGACCATCCTGAACTGAGAAGG 60.093 54.545 0.00 0.00 32.53 3.46
101 102 2.568956 TGGACCATCCTGAACTGAGAAG 59.431 50.000 0.00 0.00 37.46 2.85
102 103 2.619931 TGGACCATCCTGAACTGAGAA 58.380 47.619 0.00 0.00 37.46 2.87
103 104 2.325661 TGGACCATCCTGAACTGAGA 57.674 50.000 0.00 0.00 37.46 3.27
104 105 3.423539 TTTGGACCATCCTGAACTGAG 57.576 47.619 0.00 0.00 37.46 3.35
105 106 5.715439 ATATTTGGACCATCCTGAACTGA 57.285 39.130 0.00 0.00 37.46 3.41
106 107 6.153340 ACAAATATTTGGACCATCCTGAACTG 59.847 38.462 27.43 2.31 42.34 3.16
107 108 6.153340 CACAAATATTTGGACCATCCTGAACT 59.847 38.462 27.43 3.28 42.34 3.01
108 109 6.071391 ACACAAATATTTGGACCATCCTGAAC 60.071 38.462 27.43 0.00 42.34 3.18
109 110 6.015918 ACACAAATATTTGGACCATCCTGAA 58.984 36.000 27.43 0.00 42.34 3.02
110 111 5.579047 ACACAAATATTTGGACCATCCTGA 58.421 37.500 27.43 0.00 42.34 3.86
111 112 5.653769 AGACACAAATATTTGGACCATCCTG 59.346 40.000 27.43 17.53 42.34 3.86
112 113 5.653769 CAGACACAAATATTTGGACCATCCT 59.346 40.000 27.43 13.56 42.34 3.24
113 114 5.652014 TCAGACACAAATATTTGGACCATCC 59.348 40.000 27.43 11.93 42.34 3.51
114 115 6.757897 TCAGACACAAATATTTGGACCATC 57.242 37.500 27.43 17.48 42.34 3.51
115 116 7.378181 GTTTCAGACACAAATATTTGGACCAT 58.622 34.615 27.43 11.14 42.34 3.55
149 150 2.653726 TGCAGTGTGATGTTTCCTGTT 58.346 42.857 0.00 0.00 0.00 3.16
161 162 1.651132 GCGTGACGTTTGCAGTGTG 60.651 57.895 6.91 0.00 0.00 3.82
198 200 2.132762 CGTGTGTTGGGTTGACTACTC 58.867 52.381 0.00 0.00 0.00 2.59
227 229 3.641437 TGTTTGCAAGGTGAAGCATAC 57.359 42.857 0.00 0.00 40.94 2.39
229 231 2.629137 TCATGTTTGCAAGGTGAAGCAT 59.371 40.909 0.00 0.00 40.94 3.79
237 239 2.151202 AGGTACGTCATGTTTGCAAGG 58.849 47.619 0.00 0.00 0.00 3.61
321 323 6.388689 AGGGAGTATTTGTTATGGGTACATGA 59.611 38.462 0.00 0.00 37.97 3.07
363 365 0.666577 GGCGATGCATACCGGAGTAC 60.667 60.000 9.46 0.00 0.00 2.73
370 372 2.548178 CATCTGGGCGATGCATACC 58.452 57.895 0.00 4.15 42.75 2.73
377 379 2.827423 CCTCTGCATCTGGGCGAT 59.173 61.111 0.00 0.00 36.28 4.58
378 380 4.166888 GCCTCTGCATCTGGGCGA 62.167 66.667 0.00 0.00 37.47 5.54
381 383 4.559063 CCGGCCTCTGCATCTGGG 62.559 72.222 0.00 0.00 40.13 4.45
382 384 4.559063 CCCGGCCTCTGCATCTGG 62.559 72.222 0.00 0.00 40.13 3.86
383 385 4.559063 CCCCGGCCTCTGCATCTG 62.559 72.222 0.00 0.00 40.13 2.90
389 391 3.866582 GATGACCCCCGGCCTCTG 61.867 72.222 0.00 0.00 0.00 3.35
395 397 1.571773 AAAAGGAGGATGACCCCCGG 61.572 60.000 0.00 0.00 36.73 5.73
396 398 0.107165 GAAAAGGAGGATGACCCCCG 60.107 60.000 0.00 0.00 36.73 5.73
397 399 1.299939 AGAAAAGGAGGATGACCCCC 58.700 55.000 0.00 0.00 36.73 5.40
398 400 4.586306 TTTAGAAAAGGAGGATGACCCC 57.414 45.455 0.00 0.00 36.73 4.95
420 422 6.741240 GCCTTGTGAATGGGATGTTACTTTTT 60.741 38.462 0.00 0.00 0.00 1.94
421 423 5.279456 GCCTTGTGAATGGGATGTTACTTTT 60.279 40.000 0.00 0.00 0.00 2.27
422 424 4.220602 GCCTTGTGAATGGGATGTTACTTT 59.779 41.667 0.00 0.00 0.00 2.66
423 425 3.763897 GCCTTGTGAATGGGATGTTACTT 59.236 43.478 0.00 0.00 0.00 2.24
424 426 3.245229 TGCCTTGTGAATGGGATGTTACT 60.245 43.478 0.00 0.00 0.00 2.24
430 432 2.905415 TCTTGCCTTGTGAATGGGAT 57.095 45.000 0.00 0.00 0.00 3.85
431 433 2.673775 TTCTTGCCTTGTGAATGGGA 57.326 45.000 0.00 0.00 0.00 4.37
456 458 2.682352 TCCGGCATGTCACATGTTTATG 59.318 45.455 19.13 2.47 40.24 1.90
457 459 2.997980 TCCGGCATGTCACATGTTTAT 58.002 42.857 19.13 0.00 0.00 1.40
525 636 6.420306 CCTGATCAATCTATTCTCTGTGAACG 59.580 42.308 0.00 0.00 37.52 3.95
579 690 4.259356 TGATGTGCTTCTCTTGATTGGAG 58.741 43.478 0.00 0.00 0.00 3.86
589 700 6.754702 ATGCCATATATTGATGTGCTTCTC 57.245 37.500 0.00 0.00 0.00 2.87
608 719 5.106396 GGTGAGCACTGATCAATTATATGCC 60.106 44.000 0.00 0.00 26.97 4.40
720 845 0.108709 TGCCATACCGAACCACGTAC 60.109 55.000 0.00 0.00 40.78 3.67
725 850 2.270850 GGCTGCCATACCGAACCA 59.729 61.111 15.17 0.00 0.00 3.67
745 870 5.163478 GCATGGGTCTGCTTTCTTATCATTT 60.163 40.000 0.00 0.00 39.12 2.32
773 898 3.554934 TGGAGCCTATAGTTGCAATTGG 58.445 45.455 0.59 0.00 0.00 3.16
806 931 2.364186 GGGGAGTGGGGCCAAATG 60.364 66.667 4.39 0.00 0.00 2.32
807 932 2.537959 AGGGGAGTGGGGCCAAAT 60.538 61.111 4.39 0.00 0.00 2.32
808 933 3.589542 CAGGGGAGTGGGGCCAAA 61.590 66.667 4.39 0.00 0.00 3.28
896 1073 0.321919 GATGGTGTTGAGCTGAGCCA 60.322 55.000 0.00 0.00 0.00 4.75
1160 1357 1.423921 ACTCCAACGGGACCTCAAAAT 59.576 47.619 0.00 0.00 38.64 1.82
1203 1400 0.689080 GGGACATCCTCAGGAGCTCA 60.689 60.000 17.19 0.00 34.05 4.26
1253 1450 0.835941 ATCACAGGGCAGTCTGATCC 59.164 55.000 3.32 4.30 38.11 3.36
1259 1456 2.404995 GCAGCATCACAGGGCAGTC 61.405 63.158 0.00 0.00 0.00 3.51
1356 5499 1.540363 CCAGTGTAGTGGCAAGACGTT 60.540 52.381 0.00 0.00 0.00 3.99
1482 7546 6.072618 TGTCTAACTATCTTACGCTATCCAGC 60.073 42.308 0.00 0.00 44.90 4.85
1521 7585 9.567848 CTAGTTTCTGCTGTCTTTTGTTAAAAA 57.432 29.630 0.00 0.00 34.17 1.94
1522 7586 8.188139 CCTAGTTTCTGCTGTCTTTTGTTAAAA 58.812 33.333 0.00 0.00 0.00 1.52
1523 7587 7.554835 TCCTAGTTTCTGCTGTCTTTTGTTAAA 59.445 33.333 0.00 0.00 0.00 1.52
1524 7588 7.051623 TCCTAGTTTCTGCTGTCTTTTGTTAA 58.948 34.615 0.00 0.00 0.00 2.01
1525 7589 6.588204 TCCTAGTTTCTGCTGTCTTTTGTTA 58.412 36.000 0.00 0.00 0.00 2.41
1526 7590 5.437060 TCCTAGTTTCTGCTGTCTTTTGTT 58.563 37.500 0.00 0.00 0.00 2.83
1527 7591 5.036117 TCCTAGTTTCTGCTGTCTTTTGT 57.964 39.130 0.00 0.00 0.00 2.83
1528 7592 4.083590 GCTCCTAGTTTCTGCTGTCTTTTG 60.084 45.833 0.00 0.00 0.00 2.44
1529 7593 4.068599 GCTCCTAGTTTCTGCTGTCTTTT 58.931 43.478 0.00 0.00 0.00 2.27
1530 7594 3.071602 TGCTCCTAGTTTCTGCTGTCTTT 59.928 43.478 0.00 0.00 0.00 2.52
1531 7595 2.634940 TGCTCCTAGTTTCTGCTGTCTT 59.365 45.455 0.00 0.00 0.00 3.01
1532 7596 2.233431 CTGCTCCTAGTTTCTGCTGTCT 59.767 50.000 0.00 0.00 0.00 3.41
1533 7597 2.615869 CTGCTCCTAGTTTCTGCTGTC 58.384 52.381 0.00 0.00 0.00 3.51
1534 7598 1.277557 CCTGCTCCTAGTTTCTGCTGT 59.722 52.381 0.00 0.00 0.00 4.40
1535 7599 1.552337 TCCTGCTCCTAGTTTCTGCTG 59.448 52.381 0.00 0.00 0.00 4.41
1536 7600 1.944177 TCCTGCTCCTAGTTTCTGCT 58.056 50.000 0.00 0.00 0.00 4.24
1537 7601 2.770164 TTCCTGCTCCTAGTTTCTGC 57.230 50.000 0.00 0.00 0.00 4.26
1538 7602 5.474876 ACAATTTTCCTGCTCCTAGTTTCTG 59.525 40.000 0.00 0.00 0.00 3.02
1539 7603 5.635120 ACAATTTTCCTGCTCCTAGTTTCT 58.365 37.500 0.00 0.00 0.00 2.52
1540 7604 5.966742 ACAATTTTCCTGCTCCTAGTTTC 57.033 39.130 0.00 0.00 0.00 2.78
1574 7639 6.097356 ACTGCTTTGTTGCATTATTGATCAG 58.903 36.000 0.00 0.00 42.48 2.90
1575 7640 6.028146 ACTGCTTTGTTGCATTATTGATCA 57.972 33.333 0.00 0.00 42.48 2.92
1576 7641 8.638685 AATACTGCTTTGTTGCATTATTGATC 57.361 30.769 9.98 0.00 42.82 2.92
1578 7643 9.518906 CATAATACTGCTTTGTTGCATTATTGA 57.481 29.630 16.69 6.71 43.59 2.57
1579 7644 8.757789 CCATAATACTGCTTTGTTGCATTATTG 58.242 33.333 16.69 6.83 43.59 1.90
1580 7645 7.439056 GCCATAATACTGCTTTGTTGCATTATT 59.561 33.333 13.61 13.61 44.83 1.40
1629 7695 2.010497 GCTTTTGCGTTTTCCCCAAAA 58.990 42.857 0.00 0.00 37.06 2.44
1643 7709 4.519191 ACAATGAAACGCAAAGCTTTTG 57.481 36.364 9.53 7.81 30.42 2.44
1644 7710 6.478344 TCAATACAATGAAACGCAAAGCTTTT 59.522 30.769 9.53 0.00 32.86 2.27
1645 7711 5.982516 TCAATACAATGAAACGCAAAGCTTT 59.017 32.000 5.69 5.69 0.00 3.51
1646 7712 5.527951 TCAATACAATGAAACGCAAAGCTT 58.472 33.333 0.00 0.00 0.00 3.74
1647 7713 5.119931 TCAATACAATGAAACGCAAAGCT 57.880 34.783 0.00 0.00 0.00 3.74
1648 7714 5.629020 TCTTCAATACAATGAAACGCAAAGC 59.371 36.000 0.00 0.00 38.75 3.51
1649 7715 7.077605 TCTCTTCAATACAATGAAACGCAAAG 58.922 34.615 0.00 0.00 38.75 2.77
1650 7716 6.964908 TCTCTTCAATACAATGAAACGCAAA 58.035 32.000 0.00 0.00 38.75 3.68
1651 7717 6.552859 TCTCTTCAATACAATGAAACGCAA 57.447 33.333 0.00 0.00 38.75 4.85
1652 7718 6.552859 TTCTCTTCAATACAATGAAACGCA 57.447 33.333 0.00 0.00 38.75 5.24
1653 7719 7.298122 TCTTTCTCTTCAATACAATGAAACGC 58.702 34.615 0.00 0.00 38.75 4.84
1654 7720 8.499162 ACTCTTTCTCTTCAATACAATGAAACG 58.501 33.333 0.00 0.00 38.75 3.60
1655 7721 9.604626 CACTCTTTCTCTTCAATACAATGAAAC 57.395 33.333 0.00 0.00 38.75 2.78
1656 7722 9.342308 ACACTCTTTCTCTTCAATACAATGAAA 57.658 29.630 0.00 0.00 38.75 2.69
1657 7723 8.908786 ACACTCTTTCTCTTCAATACAATGAA 57.091 30.769 0.00 0.00 37.70 2.57
1658 7724 8.908786 AACACTCTTTCTCTTCAATACAATGA 57.091 30.769 0.00 0.00 0.00 2.57
1659 7725 9.956720 AAAACACTCTTTCTCTTCAATACAATG 57.043 29.630 0.00 0.00 0.00 2.82
1667 7733 9.607988 TGTAACATAAAACACTCTTTCTCTTCA 57.392 29.630 0.00 0.00 0.00 3.02
1669 7735 9.614792 ACTGTAACATAAAACACTCTTTCTCTT 57.385 29.630 0.00 0.00 0.00 2.85
1670 7736 9.262358 GACTGTAACATAAAACACTCTTTCTCT 57.738 33.333 0.00 0.00 0.00 3.10
1671 7737 8.496751 GGACTGTAACATAAAACACTCTTTCTC 58.503 37.037 0.00 0.00 0.00 2.87
1672 7738 8.211629 AGGACTGTAACATAAAACACTCTTTCT 58.788 33.333 0.00 0.00 0.00 2.52
1673 7739 8.379457 AGGACTGTAACATAAAACACTCTTTC 57.621 34.615 0.00 0.00 0.00 2.62
1674 7740 7.444487 GGAGGACTGTAACATAAAACACTCTTT 59.556 37.037 0.00 0.00 0.00 2.52
1675 7741 6.935208 GGAGGACTGTAACATAAAACACTCTT 59.065 38.462 0.00 0.00 0.00 2.85
1676 7742 6.270231 AGGAGGACTGTAACATAAAACACTCT 59.730 38.462 0.00 0.00 0.00 3.24
1677 7743 6.465084 AGGAGGACTGTAACATAAAACACTC 58.535 40.000 0.00 0.00 0.00 3.51
1678 7744 6.435292 AGGAGGACTGTAACATAAAACACT 57.565 37.500 0.00 0.00 0.00 3.55
1679 7745 6.817140 CCTAGGAGGACTGTAACATAAAACAC 59.183 42.308 1.05 0.00 37.67 3.32
1680 7746 6.727231 TCCTAGGAGGACTGTAACATAAAACA 59.273 38.462 7.62 0.00 40.06 2.83
1681 7747 7.179076 TCCTAGGAGGACTGTAACATAAAAC 57.821 40.000 7.62 0.00 40.06 2.43
1682 7748 7.419711 CTCCTAGGAGGACTGTAACATAAAA 57.580 40.000 28.68 0.00 40.06 1.52
1697 7763 2.959707 ACTGTAATTCGCCTCCTAGGAG 59.040 50.000 29.27 29.27 37.67 3.69
1698 7764 2.957006 GACTGTAATTCGCCTCCTAGGA 59.043 50.000 11.98 11.98 37.67 2.94
1699 7765 2.693591 TGACTGTAATTCGCCTCCTAGG 59.306 50.000 0.82 0.82 38.80 3.02
1700 7766 3.243569 CCTGACTGTAATTCGCCTCCTAG 60.244 52.174 0.00 0.00 0.00 3.02
1701 7767 2.693591 CCTGACTGTAATTCGCCTCCTA 59.306 50.000 0.00 0.00 0.00 2.94
1702 7768 1.482593 CCTGACTGTAATTCGCCTCCT 59.517 52.381 0.00 0.00 0.00 3.69
1703 7769 1.473434 CCCTGACTGTAATTCGCCTCC 60.473 57.143 0.00 0.00 0.00 4.30
1704 7770 1.473434 CCCCTGACTGTAATTCGCCTC 60.473 57.143 0.00 0.00 0.00 4.70
1705 7771 0.541863 CCCCTGACTGTAATTCGCCT 59.458 55.000 0.00 0.00 0.00 5.52
1706 7772 0.539986 TCCCCTGACTGTAATTCGCC 59.460 55.000 0.00 0.00 0.00 5.54
1707 7773 1.066430 TGTCCCCTGACTGTAATTCGC 60.066 52.381 0.00 0.00 42.28 4.70
1708 7774 2.618053 GTGTCCCCTGACTGTAATTCG 58.382 52.381 0.00 0.00 42.28 3.34
1709 7775 2.232941 TCGTGTCCCCTGACTGTAATTC 59.767 50.000 0.00 0.00 42.28 2.17
1710 7776 2.233922 CTCGTGTCCCCTGACTGTAATT 59.766 50.000 0.00 0.00 42.28 1.40
1711 7777 1.825474 CTCGTGTCCCCTGACTGTAAT 59.175 52.381 0.00 0.00 42.28 1.89
1712 7778 1.254026 CTCGTGTCCCCTGACTGTAA 58.746 55.000 0.00 0.00 42.28 2.41
1713 7779 1.248785 GCTCGTGTCCCCTGACTGTA 61.249 60.000 0.00 0.00 42.28 2.74
1714 7780 2.574955 GCTCGTGTCCCCTGACTGT 61.575 63.158 0.00 0.00 42.28 3.55
1715 7781 0.965866 TAGCTCGTGTCCCCTGACTG 60.966 60.000 0.00 0.00 42.28 3.51
1716 7782 0.681564 CTAGCTCGTGTCCCCTGACT 60.682 60.000 0.00 0.00 42.28 3.41
1717 7783 0.966370 ACTAGCTCGTGTCCCCTGAC 60.966 60.000 0.00 0.00 42.12 3.51
1718 7784 0.965866 CACTAGCTCGTGTCCCCTGA 60.966 60.000 10.13 0.00 0.00 3.86
1719 7785 1.513158 CACTAGCTCGTGTCCCCTG 59.487 63.158 10.13 0.00 0.00 4.45
1720 7786 2.352032 GCACTAGCTCGTGTCCCCT 61.352 63.158 18.55 0.00 37.24 4.79
1721 7787 2.184579 GCACTAGCTCGTGTCCCC 59.815 66.667 18.55 0.00 37.24 4.81
1722 7788 1.446272 GTGCACTAGCTCGTGTCCC 60.446 63.158 18.55 4.20 42.74 4.46
1723 7789 4.170723 GTGCACTAGCTCGTGTCC 57.829 61.111 18.55 6.90 42.74 4.02
1729 7795 1.153745 CTGGGACGTGCACTAGCTC 60.154 63.158 16.19 4.32 42.74 4.09
1730 7796 2.650116 CCTGGGACGTGCACTAGCT 61.650 63.158 16.19 0.00 42.74 3.32
1731 7797 2.125512 CCTGGGACGTGCACTAGC 60.126 66.667 16.19 3.57 42.57 3.42
1732 7798 1.215647 GACCTGGGACGTGCACTAG 59.784 63.158 16.19 2.33 0.00 2.57
1733 7799 2.632544 CGACCTGGGACGTGCACTA 61.633 63.158 16.19 0.00 0.00 2.74
1734 7800 3.991051 CGACCTGGGACGTGCACT 61.991 66.667 16.19 1.46 0.00 4.40
1744 7810 4.410400 GTCTTGCCCCCGACCTGG 62.410 72.222 0.00 0.00 37.55 4.45
1745 7811 1.987855 TAGTCTTGCCCCCGACCTG 60.988 63.158 0.00 0.00 0.00 4.00
1746 7812 1.988406 GTAGTCTTGCCCCCGACCT 60.988 63.158 0.00 0.00 0.00 3.85
1747 7813 1.957765 GAGTAGTCTTGCCCCCGACC 61.958 65.000 0.00 0.00 0.00 4.79
1748 7814 0.971447 AGAGTAGTCTTGCCCCCGAC 60.971 60.000 0.00 0.00 0.00 4.79
1749 7815 0.970937 CAGAGTAGTCTTGCCCCCGA 60.971 60.000 0.00 0.00 0.00 5.14
1750 7816 0.970937 TCAGAGTAGTCTTGCCCCCG 60.971 60.000 0.00 0.00 0.00 5.73
1751 7817 0.827368 CTCAGAGTAGTCTTGCCCCC 59.173 60.000 0.00 0.00 0.00 5.40
1752 7818 0.176910 GCTCAGAGTAGTCTTGCCCC 59.823 60.000 0.00 0.00 0.00 5.80
1753 7819 0.176910 GGCTCAGAGTAGTCTTGCCC 59.823 60.000 22.08 9.63 41.07 5.36
1754 7820 0.176910 GGGCTCAGAGTAGTCTTGCC 59.823 60.000 23.54 23.54 43.91 4.52
1755 7821 0.898320 TGGGCTCAGAGTAGTCTTGC 59.102 55.000 11.83 11.83 0.00 4.01
1756 7822 1.134848 GCTGGGCTCAGAGTAGTCTTG 60.135 57.143 20.53 0.00 43.49 3.02
1757 7823 1.190643 GCTGGGCTCAGAGTAGTCTT 58.809 55.000 20.53 0.00 43.49 3.01
1758 7824 0.040351 TGCTGGGCTCAGAGTAGTCT 59.960 55.000 20.53 0.00 43.49 3.24
1759 7825 0.459489 CTGCTGGGCTCAGAGTAGTC 59.541 60.000 20.53 0.00 43.49 2.59
1760 7826 1.612395 GCTGCTGGGCTCAGAGTAGT 61.612 60.000 20.53 0.00 43.49 2.73
1761 7827 1.143620 GCTGCTGGGCTCAGAGTAG 59.856 63.158 20.53 12.99 43.49 2.57
1762 7828 2.714991 CGCTGCTGGGCTCAGAGTA 61.715 63.158 20.53 1.08 43.49 2.59
1763 7829 4.079850 CGCTGCTGGGCTCAGAGT 62.080 66.667 20.53 0.00 43.49 3.24
1781 7847 0.893727 AAACTTTGGGCTACGGCAGG 60.894 55.000 0.00 0.00 40.87 4.85
1782 7848 0.240945 CAAACTTTGGGCTACGGCAG 59.759 55.000 0.00 0.00 40.87 4.85
1783 7849 2.336341 CAAACTTTGGGCTACGGCA 58.664 52.632 0.00 0.00 40.87 5.69
1793 7859 1.615392 CAAGGAGGAGGCCAAACTTTG 59.385 52.381 5.01 2.65 0.00 2.77
1794 7860 1.499007 TCAAGGAGGAGGCCAAACTTT 59.501 47.619 5.01 0.00 0.00 2.66
1795 7861 1.149101 TCAAGGAGGAGGCCAAACTT 58.851 50.000 5.01 0.00 0.00 2.66
1796 7862 1.005215 CATCAAGGAGGAGGCCAAACT 59.995 52.381 5.01 0.00 0.00 2.66
1797 7863 1.467920 CATCAAGGAGGAGGCCAAAC 58.532 55.000 5.01 0.00 0.00 2.93
1798 7864 0.323725 GCATCAAGGAGGAGGCCAAA 60.324 55.000 5.01 0.00 38.57 3.28
1799 7865 1.304282 GCATCAAGGAGGAGGCCAA 59.696 57.895 5.01 0.00 38.57 4.52
1800 7866 3.001514 GCATCAAGGAGGAGGCCA 58.998 61.111 5.01 0.00 38.57 5.36
1802 7868 2.203126 CGGCATCAAGGAGGAGGC 60.203 66.667 0.00 0.00 43.42 4.70
1803 7869 1.153289 CACGGCATCAAGGAGGAGG 60.153 63.158 0.00 0.00 0.00 4.30
1804 7870 0.250234 TTCACGGCATCAAGGAGGAG 59.750 55.000 0.00 0.00 0.00 3.69
1805 7871 0.036388 GTTCACGGCATCAAGGAGGA 60.036 55.000 0.00 0.00 0.00 3.71
1806 7872 0.036010 AGTTCACGGCATCAAGGAGG 60.036 55.000 0.00 0.00 0.00 4.30
1807 7873 2.544685 CTAGTTCACGGCATCAAGGAG 58.455 52.381 0.00 0.00 0.00 3.69
1808 7874 1.405526 GCTAGTTCACGGCATCAAGGA 60.406 52.381 0.00 0.00 0.00 3.36
1809 7875 1.009829 GCTAGTTCACGGCATCAAGG 58.990 55.000 0.00 0.00 0.00 3.61
1810 7876 0.647410 CGCTAGTTCACGGCATCAAG 59.353 55.000 0.00 0.00 0.00 3.02
1811 7877 0.037697 ACGCTAGTTCACGGCATCAA 60.038 50.000 0.00 0.00 0.00 2.57
1812 7878 0.457853 GACGCTAGTTCACGGCATCA 60.458 55.000 0.00 0.00 37.24 3.07
1813 7879 1.146358 GGACGCTAGTTCACGGCATC 61.146 60.000 0.00 0.00 39.73 3.91
1814 7880 1.153628 GGACGCTAGTTCACGGCAT 60.154 57.895 0.00 0.00 39.73 4.40
1815 7881 2.260434 GGACGCTAGTTCACGGCA 59.740 61.111 0.00 0.00 39.73 5.69
1816 7882 2.879462 CGGACGCTAGTTCACGGC 60.879 66.667 0.00 0.00 36.28 5.68
1817 7883 2.001361 ATCCGGACGCTAGTTCACGG 62.001 60.000 6.12 10.47 40.93 4.94
1818 7884 0.866061 CATCCGGACGCTAGTTCACG 60.866 60.000 6.12 0.00 0.00 4.35
1819 7885 0.527817 CCATCCGGACGCTAGTTCAC 60.528 60.000 6.12 0.00 0.00 3.18
1820 7886 0.681887 TCCATCCGGACGCTAGTTCA 60.682 55.000 6.12 0.00 35.91 3.18
1821 7887 0.458669 TTCCATCCGGACGCTAGTTC 59.541 55.000 6.12 0.00 42.67 3.01
1822 7888 0.460311 CTTCCATCCGGACGCTAGTT 59.540 55.000 6.12 0.00 42.67 2.24
1823 7889 1.392710 CCTTCCATCCGGACGCTAGT 61.393 60.000 6.12 0.00 42.67 2.57
1824 7890 1.364171 CCTTCCATCCGGACGCTAG 59.636 63.158 6.12 2.02 42.67 3.42
1825 7891 2.131709 CCCTTCCATCCGGACGCTA 61.132 63.158 6.12 0.00 42.67 4.26
1826 7892 3.470888 CCCTTCCATCCGGACGCT 61.471 66.667 6.12 0.00 42.67 5.07
1828 7894 4.891727 CGCCCTTCCATCCGGACG 62.892 72.222 6.12 0.00 42.67 4.79
1829 7895 3.782443 ACGCCCTTCCATCCGGAC 61.782 66.667 6.12 0.00 42.67 4.79
1830 7896 3.781307 CACGCCCTTCCATCCGGA 61.781 66.667 6.61 6.61 40.60 5.14
1833 7899 4.778143 ACGCACGCCCTTCCATCC 62.778 66.667 0.00 0.00 0.00 3.51
1834 7900 3.195698 GACGCACGCCCTTCCATC 61.196 66.667 0.00 0.00 0.00 3.51
1838 7904 4.072088 CAACGACGCACGCCCTTC 62.072 66.667 0.00 0.00 46.94 3.46
1839 7905 4.595538 TCAACGACGCACGCCCTT 62.596 61.111 0.00 0.00 46.94 3.95
1840 7906 4.595538 TTCAACGACGCACGCCCT 62.596 61.111 0.00 0.00 46.94 5.19
1841 7907 4.072088 CTTCAACGACGCACGCCC 62.072 66.667 0.00 0.00 46.94 6.13
1842 7908 3.033764 TCTTCAACGACGCACGCC 61.034 61.111 0.00 0.00 46.94 5.68
1843 7909 2.167918 GTCTTCAACGACGCACGC 59.832 61.111 0.00 0.00 46.94 5.34
1862 7928 0.447406 TGGAAGCATCGCAACGATTG 59.553 50.000 0.00 0.00 44.59 2.67
1863 7929 0.729116 CTGGAAGCATCGCAACGATT 59.271 50.000 0.00 0.00 44.59 3.34
1865 7931 0.108186 ATCTGGAAGCATCGCAACGA 60.108 50.000 0.00 0.00 41.13 3.85
1866 7932 0.302890 GATCTGGAAGCATCGCAACG 59.697 55.000 0.00 0.00 0.00 4.10
1867 7933 1.372582 TGATCTGGAAGCATCGCAAC 58.627 50.000 0.00 0.00 0.00 4.17
1868 7934 2.216046 GATGATCTGGAAGCATCGCAA 58.784 47.619 0.00 0.00 30.41 4.85
1869 7935 1.541889 GGATGATCTGGAAGCATCGCA 60.542 52.381 0.00 0.00 39.36 5.10
1870 7936 1.155042 GGATGATCTGGAAGCATCGC 58.845 55.000 0.00 0.00 39.36 4.58
1871 7937 2.414806 CTGGATGATCTGGAAGCATCG 58.585 52.381 0.00 0.00 39.36 3.84
1872 7938 2.371179 TCCTGGATGATCTGGAAGCATC 59.629 50.000 0.00 0.00 38.10 3.91
1873 7939 2.372504 CTCCTGGATGATCTGGAAGCAT 59.627 50.000 0.00 0.00 34.96 3.79
1874 7940 1.767088 CTCCTGGATGATCTGGAAGCA 59.233 52.381 0.00 0.00 34.96 3.91
1875 7941 1.072015 CCTCCTGGATGATCTGGAAGC 59.928 57.143 0.00 0.00 34.96 3.86
1876 7942 2.406559 ACCTCCTGGATGATCTGGAAG 58.593 52.381 5.95 5.90 34.96 3.46
1877 7943 2.575921 ACCTCCTGGATGATCTGGAA 57.424 50.000 5.95 0.00 34.96 3.53
1878 7944 3.207549 TCTTACCTCCTGGATGATCTGGA 59.792 47.826 5.95 7.31 37.04 3.86
1879 7945 3.581101 TCTTACCTCCTGGATGATCTGG 58.419 50.000 5.95 0.92 37.04 3.86
1880 7946 4.653341 ACTTCTTACCTCCTGGATGATCTG 59.347 45.833 5.95 0.00 37.04 2.90
1881 7947 4.653341 CACTTCTTACCTCCTGGATGATCT 59.347 45.833 5.95 0.00 37.04 2.75
1882 7948 4.407296 ACACTTCTTACCTCCTGGATGATC 59.593 45.833 5.95 0.00 37.04 2.92
1883 7949 4.366267 ACACTTCTTACCTCCTGGATGAT 58.634 43.478 5.95 0.00 37.04 2.45
1884 7950 3.769844 GACACTTCTTACCTCCTGGATGA 59.230 47.826 5.95 0.00 37.04 2.92
1885 7951 3.429547 CGACACTTCTTACCTCCTGGATG 60.430 52.174 0.00 0.00 37.04 3.51
1886 7952 2.761208 CGACACTTCTTACCTCCTGGAT 59.239 50.000 0.00 0.00 37.04 3.41
1887 7953 2.168496 CGACACTTCTTACCTCCTGGA 58.832 52.381 0.00 0.00 37.04 3.86
1888 7954 1.404315 GCGACACTTCTTACCTCCTGG 60.404 57.143 0.00 0.00 39.83 4.45
1889 7955 1.732732 CGCGACACTTCTTACCTCCTG 60.733 57.143 0.00 0.00 0.00 3.86
1890 7956 0.526662 CGCGACACTTCTTACCTCCT 59.473 55.000 0.00 0.00 0.00 3.69
1891 7957 0.458025 CCGCGACACTTCTTACCTCC 60.458 60.000 8.23 0.00 0.00 4.30
1892 7958 0.524862 TCCGCGACACTTCTTACCTC 59.475 55.000 8.23 0.00 0.00 3.85
1893 7959 1.135083 CATCCGCGACACTTCTTACCT 60.135 52.381 8.23 0.00 0.00 3.08
1894 7960 1.278238 CATCCGCGACACTTCTTACC 58.722 55.000 8.23 0.00 0.00 2.85
1895 7961 0.645868 GCATCCGCGACACTTCTTAC 59.354 55.000 8.23 0.00 0.00 2.34
1896 7962 0.459585 GGCATCCGCGACACTTCTTA 60.460 55.000 8.23 0.00 39.92 2.10
1897 7963 1.741770 GGCATCCGCGACACTTCTT 60.742 57.895 8.23 0.00 39.92 2.52
1898 7964 2.125512 GGCATCCGCGACACTTCT 60.126 61.111 8.23 0.00 39.92 2.85
1899 7965 2.434185 TGGCATCCGCGACACTTC 60.434 61.111 8.23 0.00 39.92 3.01
1900 7966 2.434884 CTGGCATCCGCGACACTT 60.435 61.111 8.23 0.00 39.92 3.16
1940 8006 3.704231 ATGATGCCCGGCAGGTCAC 62.704 63.158 18.96 7.23 43.65 3.67
1941 8007 3.410628 ATGATGCCCGGCAGGTCA 61.411 61.111 18.96 17.48 43.65 4.02
1942 8008 2.903855 CATGATGCCCGGCAGGTC 60.904 66.667 18.96 12.03 43.65 3.85
1952 8018 2.166870 TCTTTGATTGGTGGCATGATGC 59.833 45.455 9.33 9.33 44.08 3.91
1953 8019 3.181479 CCTCTTTGATTGGTGGCATGATG 60.181 47.826 0.00 0.00 0.00 3.07
1954 8020 3.028850 CCTCTTTGATTGGTGGCATGAT 58.971 45.455 0.00 0.00 0.00 2.45
1955 8021 2.449464 CCTCTTTGATTGGTGGCATGA 58.551 47.619 0.00 0.00 0.00 3.07
1956 8022 1.479323 CCCTCTTTGATTGGTGGCATG 59.521 52.381 0.00 0.00 0.00 4.06
1957 8023 1.077663 ACCCTCTTTGATTGGTGGCAT 59.922 47.619 0.00 0.00 0.00 4.40
1958 8024 0.482446 ACCCTCTTTGATTGGTGGCA 59.518 50.000 0.00 0.00 0.00 4.92
1959 8025 2.369394 CTACCCTCTTTGATTGGTGGC 58.631 52.381 0.00 0.00 32.27 5.01
1960 8026 2.369394 GCTACCCTCTTTGATTGGTGG 58.631 52.381 0.00 0.00 32.97 4.61
1961 8027 2.025887 AGGCTACCCTCTTTGATTGGTG 60.026 50.000 0.00 0.00 36.46 4.17
1962 8028 2.279173 AGGCTACCCTCTTTGATTGGT 58.721 47.619 0.00 0.00 36.46 3.67
1973 8039 2.711922 CGAGCAACGAGGCTACCCT 61.712 63.158 5.61 0.00 45.99 4.34
1974 8040 2.202756 CGAGCAACGAGGCTACCC 60.203 66.667 5.61 0.00 45.99 3.69
1975 8041 2.202756 CCGAGCAACGAGGCTACC 60.203 66.667 5.61 0.00 45.99 3.18
1976 8042 2.202756 CCCGAGCAACGAGGCTAC 60.203 66.667 5.61 0.58 45.99 3.58
1977 8043 3.458163 CCCCGAGCAACGAGGCTA 61.458 66.667 5.61 0.00 45.99 3.93
1988 8054 4.785453 GACTTGCAGGCCCCCGAG 62.785 72.222 0.00 2.05 0.00 4.63
1990 8056 4.431131 ATGACTTGCAGGCCCCCG 62.431 66.667 0.00 0.00 0.00 5.73
1991 8057 2.757099 CATGACTTGCAGGCCCCC 60.757 66.667 0.00 0.00 0.00 5.40
2000 8066 0.745486 TCCTGGATGCGCATGACTTG 60.745 55.000 30.76 15.79 0.00 3.16
2001 8067 0.463295 CTCCTGGATGCGCATGACTT 60.463 55.000 30.76 3.00 0.00 3.01
2002 8068 1.145598 CTCCTGGATGCGCATGACT 59.854 57.895 30.76 3.52 0.00 3.41
2003 8069 0.879400 CTCTCCTGGATGCGCATGAC 60.879 60.000 30.76 20.53 0.00 3.06
2004 8070 1.444672 CTCTCCTGGATGCGCATGA 59.555 57.895 30.76 17.61 0.00 3.07
2005 8071 1.597302 CCTCTCCTGGATGCGCATG 60.597 63.158 30.76 13.79 0.00 4.06
2006 8072 1.126329 ATCCTCTCCTGGATGCGCAT 61.126 55.000 25.66 25.66 44.48 4.73
2007 8073 1.752358 GATCCTCTCCTGGATGCGCA 61.752 60.000 14.96 14.96 46.00 6.09
2008 8074 1.005156 GATCCTCTCCTGGATGCGC 60.005 63.158 0.00 0.00 46.00 6.09
2009 8075 0.602562 GAGATCCTCTCCTGGATGCG 59.397 60.000 0.00 0.00 46.00 4.73
2010 8076 0.602562 CGAGATCCTCTCCTGGATGC 59.397 60.000 0.00 0.00 46.00 3.91
2011 8077 1.202989 TCCGAGATCCTCTCCTGGATG 60.203 57.143 0.00 0.00 46.00 3.51
2013 8079 0.183971 GTCCGAGATCCTCTCCTGGA 59.816 60.000 0.00 0.00 40.34 3.86
2014 8080 0.825840 GGTCCGAGATCCTCTCCTGG 60.826 65.000 0.00 0.00 40.34 4.45
2015 8081 0.106469 TGGTCCGAGATCCTCTCCTG 60.106 60.000 0.00 0.00 40.34 3.86
2016 8082 0.184933 CTGGTCCGAGATCCTCTCCT 59.815 60.000 0.00 0.00 40.34 3.69
2017 8083 0.183971 TCTGGTCCGAGATCCTCTCC 59.816 60.000 0.00 0.00 40.34 3.71
2018 8084 1.314730 GTCTGGTCCGAGATCCTCTC 58.685 60.000 0.00 0.00 40.06 3.20
2019 8085 0.464735 CGTCTGGTCCGAGATCCTCT 60.465 60.000 0.00 0.00 0.00 3.69
2020 8086 0.748729 ACGTCTGGTCCGAGATCCTC 60.749 60.000 0.00 0.00 0.00 3.71
2021 8087 1.032657 CACGTCTGGTCCGAGATCCT 61.033 60.000 0.00 0.00 0.00 3.24
2022 8088 1.433879 CACGTCTGGTCCGAGATCC 59.566 63.158 0.00 0.00 0.00 3.36
2023 8089 1.226717 GCACGTCTGGTCCGAGATC 60.227 63.158 0.00 0.00 0.00 2.75
2024 8090 2.711922 GGCACGTCTGGTCCGAGAT 61.712 63.158 0.00 0.00 0.00 2.75
2025 8091 3.371063 GGCACGTCTGGTCCGAGA 61.371 66.667 0.00 0.00 0.00 4.04
2026 8092 3.343788 GAGGCACGTCTGGTCCGAG 62.344 68.421 0.00 0.00 0.00 4.63
2027 8093 3.371063 GAGGCACGTCTGGTCCGA 61.371 66.667 0.00 0.00 0.00 4.55
2028 8094 4.778415 CGAGGCACGTCTGGTCCG 62.778 72.222 0.00 0.00 37.22 4.79
2029 8095 3.343788 CTCGAGGCACGTCTGGTCC 62.344 68.421 3.91 0.00 43.13 4.46
2030 8096 1.863662 TTCTCGAGGCACGTCTGGTC 61.864 60.000 13.56 0.00 43.13 4.02
2031 8097 1.867919 CTTCTCGAGGCACGTCTGGT 61.868 60.000 13.56 0.00 43.13 4.00
2032 8098 1.153939 CTTCTCGAGGCACGTCTGG 60.154 63.158 13.56 0.00 43.13 3.86
2033 8099 1.153939 CCTTCTCGAGGCACGTCTG 60.154 63.158 13.56 0.00 39.09 3.51
2034 8100 0.894184 TTCCTTCTCGAGGCACGTCT 60.894 55.000 13.56 0.00 45.87 4.18
2035 8101 0.733223 GTTCCTTCTCGAGGCACGTC 60.733 60.000 13.56 0.00 45.87 4.34
2036 8102 1.289380 GTTCCTTCTCGAGGCACGT 59.711 57.895 13.56 0.00 45.87 4.49
2037 8103 1.009389 GTGTTCCTTCTCGAGGCACG 61.009 60.000 13.56 0.00 43.75 5.34
2038 8104 0.670854 GGTGTTCCTTCTCGAGGCAC 60.671 60.000 13.56 11.48 45.87 5.01
2039 8105 1.671742 GGTGTTCCTTCTCGAGGCA 59.328 57.895 13.56 0.00 45.87 4.75
2040 8106 1.079057 GGGTGTTCCTTCTCGAGGC 60.079 63.158 13.56 0.00 45.87 4.70
2042 8108 1.338200 CCTTGGGTGTTCCTTCTCGAG 60.338 57.143 5.93 5.93 36.20 4.04
2043 8109 0.685097 CCTTGGGTGTTCCTTCTCGA 59.315 55.000 0.00 0.00 36.20 4.04
2044 8110 0.685097 TCCTTGGGTGTTCCTTCTCG 59.315 55.000 0.00 0.00 36.20 4.04
2045 8111 1.003696 CCTCCTTGGGTGTTCCTTCTC 59.996 57.143 0.00 0.00 36.20 2.87
2046 8112 1.068121 CCTCCTTGGGTGTTCCTTCT 58.932 55.000 0.00 0.00 36.20 2.85
2047 8113 1.064825 TCCTCCTTGGGTGTTCCTTC 58.935 55.000 0.00 0.00 36.20 3.46
2048 8114 1.760405 ATCCTCCTTGGGTGTTCCTT 58.240 50.000 0.00 0.00 36.20 3.36
2049 8115 2.197465 GTATCCTCCTTGGGTGTTCCT 58.803 52.381 0.00 0.00 36.20 3.36
2050 8116 1.913419 TGTATCCTCCTTGGGTGTTCC 59.087 52.381 0.00 0.00 36.20 3.62
2051 8117 3.933861 ATGTATCCTCCTTGGGTGTTC 57.066 47.619 0.00 0.00 36.20 3.18
2052 8118 4.044065 TGAAATGTATCCTCCTTGGGTGTT 59.956 41.667 0.00 0.00 36.20 3.32
2053 8119 3.591527 TGAAATGTATCCTCCTTGGGTGT 59.408 43.478 0.00 0.00 36.20 4.16
2054 8120 4.202441 CTGAAATGTATCCTCCTTGGGTG 58.798 47.826 0.00 0.00 36.20 4.61
2055 8121 3.852578 ACTGAAATGTATCCTCCTTGGGT 59.147 43.478 0.00 0.00 36.20 4.51
2056 8122 4.510167 ACTGAAATGTATCCTCCTTGGG 57.490 45.455 0.00 0.00 36.20 4.12
2057 8123 4.884164 GGAACTGAAATGTATCCTCCTTGG 59.116 45.833 0.00 0.00 37.10 3.61
2058 8124 4.572389 CGGAACTGAAATGTATCCTCCTTG 59.428 45.833 0.00 0.00 0.00 3.61
2059 8125 4.225267 ACGGAACTGAAATGTATCCTCCTT 59.775 41.667 0.00 0.00 0.00 3.36
2060 8126 3.775316 ACGGAACTGAAATGTATCCTCCT 59.225 43.478 0.00 0.00 0.00 3.69
2061 8127 4.138487 ACGGAACTGAAATGTATCCTCC 57.862 45.455 0.00 0.00 0.00 4.30
2062 8128 5.657474 TGTACGGAACTGAAATGTATCCTC 58.343 41.667 0.00 0.00 0.00 3.71
2063 8129 5.670792 TGTACGGAACTGAAATGTATCCT 57.329 39.130 0.00 0.00 0.00 3.24
2064 8130 5.873164 ACTTGTACGGAACTGAAATGTATCC 59.127 40.000 0.00 0.00 0.00 2.59
2065 8131 6.367969 ACACTTGTACGGAACTGAAATGTATC 59.632 38.462 0.00 0.00 0.00 2.24
2066 8132 6.228258 ACACTTGTACGGAACTGAAATGTAT 58.772 36.000 0.00 0.00 0.00 2.29
2112 8182 7.860872 GGAACTACCGATGCCTAAAAATAATTG 59.139 37.037 0.00 0.00 0.00 2.32
2113 8183 7.558444 TGGAACTACCGATGCCTAAAAATAATT 59.442 33.333 0.00 0.00 42.61 1.40
2125 8195 1.871080 CAGGATGGAACTACCGATGC 58.129 55.000 0.00 0.00 42.61 3.91
2135 8205 0.770499 TGTTGTGGAGCAGGATGGAA 59.230 50.000 0.00 0.00 35.86 3.53
2161 8242 7.445121 CCTTGGCTTAGATGATAGATTGTACA 58.555 38.462 0.00 0.00 0.00 2.90
2162 8243 6.370166 GCCTTGGCTTAGATGATAGATTGTAC 59.630 42.308 4.11 0.00 0.00 2.90
2207 8299 4.288366 TCCTGTACCACCTGATCATTTCAA 59.712 41.667 0.00 0.00 32.78 2.69
2216 8308 3.562141 TGGTTCCTGTACCACCTGA 57.438 52.632 0.00 0.00 43.14 3.86
2254 8346 7.977853 GGATTGATGTCATTGCAATACTTTTCT 59.022 33.333 12.53 0.00 32.80 2.52
2260 8353 8.570488 TCTATTGGATTGATGTCATTGCAATAC 58.430 33.333 12.53 11.15 42.34 1.89
2341 8436 7.978099 AATCTTCCTTATGCCCATTAAAACT 57.022 32.000 0.00 0.00 0.00 2.66
2353 8448 8.927411 ACCCCAATAATTGAAATCTTCCTTATG 58.073 33.333 0.00 0.00 0.00 1.90
2360 8455 8.601546 TGCTTTTACCCCAATAATTGAAATCTT 58.398 29.630 0.00 0.00 0.00 2.40
2367 8462 6.696411 TCACTTGCTTTTACCCCAATAATTG 58.304 36.000 0.00 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.