Multiple sequence alignment - TraesCS5A01G341200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G341200 chr5A 100.000 5128 0 0 1 5128 547408317 547413444 0.000000e+00 9470.0
1 TraesCS5A01G341200 chr5A 77.778 153 25 9 164 310 655925948 655926097 9.150000e-13 86.1
2 TraesCS5A01G341200 chr5D 88.084 2249 153 72 2386 4569 432871454 432873652 0.000000e+00 2562.0
3 TraesCS5A01G341200 chr5D 90.303 1485 84 25 949 2400 432869886 432871343 0.000000e+00 1890.0
4 TraesCS5A01G341200 chr5D 85.967 962 69 24 1 913 432845134 432846078 0.000000e+00 968.0
5 TraesCS5A01G341200 chr5D 89.634 164 16 1 4704 4866 26906338 26906501 1.870000e-49 207.0
6 TraesCS5A01G341200 chr5D 88.623 167 19 0 4701 4867 59947679 59947845 2.420000e-48 204.0
7 TraesCS5A01G341200 chr5B 91.638 1770 83 27 2386 4117 525810519 525812261 0.000000e+00 2388.0
8 TraesCS5A01G341200 chr5B 90.372 592 32 10 1830 2400 525809821 525810408 0.000000e+00 754.0
9 TraesCS5A01G341200 chr5B 82.885 707 60 29 1031 1691 525809057 525809748 3.440000e-161 579.0
10 TraesCS5A01G341200 chr5B 86.873 259 34 0 4240 4498 525812359 525812617 1.810000e-74 291.0
11 TraesCS5A01G341200 chr5B 85.572 201 18 8 4499 4694 525812782 525812976 3.130000e-47 200.0
12 TraesCS5A01G341200 chr5B 76.786 224 36 12 95 305 664940366 664940586 1.510000e-20 111.0
13 TraesCS5A01G341200 chr7D 87.260 1405 108 31 2564 3924 566026735 566028112 0.000000e+00 1537.0
14 TraesCS5A01G341200 chr7D 89.463 949 66 12 1649 2568 566025208 566026151 0.000000e+00 1168.0
15 TraesCS5A01G341200 chr7D 90.123 162 16 0 4704 4865 397554916 397555077 1.450000e-50 211.0
16 TraesCS5A01G341200 chr7D 89.157 166 17 1 4700 4865 619400838 619400674 6.730000e-49 206.0
17 TraesCS5A01G341200 chr7A 82.814 1670 152 56 2564 4156 652302330 652303941 0.000000e+00 1369.0
18 TraesCS5A01G341200 chr7A 89.041 949 70 12 1649 2568 652301133 652302076 0.000000e+00 1146.0
19 TraesCS5A01G341200 chr7A 90.741 162 15 0 4704 4865 451519972 451519811 3.110000e-52 217.0
20 TraesCS5A01G341200 chr7A 78.528 163 26 9 156 315 76930329 76930485 1.180000e-16 99.0
21 TraesCS5A01G341200 chr7B 85.033 1363 123 27 2670 3995 617566913 617568231 0.000000e+00 1312.0
22 TraesCS5A01G341200 chr7B 88.537 820 62 13 1649 2441 617566099 617566913 0.000000e+00 965.0
23 TraesCS5A01G341200 chr7B 82.440 672 54 24 1037 1691 493210820 493211444 3.520000e-146 529.0
24 TraesCS5A01G341200 chr7B 89.286 168 17 1 4700 4867 102234314 102234480 5.200000e-50 209.0
25 TraesCS5A01G341200 chr3D 88.690 168 18 1 4700 4867 553037749 553037915 2.420000e-48 204.0
26 TraesCS5A01G341200 chr3D 88.690 168 18 1 4700 4867 553071061 553071227 2.420000e-48 204.0
27 TraesCS5A01G341200 chr3D 91.667 72 6 0 3062 3133 133228560 133228631 3.270000e-17 100.0
28 TraesCS5A01G341200 chr6D 88.166 169 18 2 4700 4867 409773842 409774009 3.130000e-47 200.0
29 TraesCS5A01G341200 chr4B 80.233 172 23 11 177 343 90461609 90461444 9.020000e-23 119.0
30 TraesCS5A01G341200 chr3B 79.213 178 28 9 139 312 621542138 621542310 1.170000e-21 115.0
31 TraesCS5A01G341200 chr1D 95.714 70 3 0 233 302 399811253 399811184 4.200000e-21 113.0
32 TraesCS5A01G341200 chr1B 92.857 70 5 0 233 302 536574343 536574274 9.080000e-18 102.0
33 TraesCS5A01G341200 chr2D 87.500 80 10 0 261 340 634078208 634078287 5.470000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G341200 chr5A 547408317 547413444 5127 False 9470.0 9470 100.0000 1 5128 1 chr5A.!!$F1 5127
1 TraesCS5A01G341200 chr5D 432869886 432873652 3766 False 2226.0 2562 89.1935 949 4569 2 chr5D.!!$F4 3620
2 TraesCS5A01G341200 chr5D 432845134 432846078 944 False 968.0 968 85.9670 1 913 1 chr5D.!!$F3 912
3 TraesCS5A01G341200 chr5B 525809057 525812976 3919 False 842.4 2388 87.4680 1031 4694 5 chr5B.!!$F2 3663
4 TraesCS5A01G341200 chr7D 566025208 566028112 2904 False 1352.5 1537 88.3615 1649 3924 2 chr7D.!!$F2 2275
5 TraesCS5A01G341200 chr7A 652301133 652303941 2808 False 1257.5 1369 85.9275 1649 4156 2 chr7A.!!$F2 2507
6 TraesCS5A01G341200 chr7B 617566099 617568231 2132 False 1138.5 1312 86.7850 1649 3995 2 chr7B.!!$F3 2346
7 TraesCS5A01G341200 chr7B 493210820 493211444 624 False 529.0 529 82.4400 1037 1691 1 chr7B.!!$F2 654

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
184 185 0.039256 CCTTGTGCACCAAATGTCCG 60.039 55.0 15.69 0.0 31.20 4.79 F
1611 1728 0.105246 AGGCTCAGGGGACAGATAGG 60.105 60.0 0.00 0.0 0.00 2.57 F
2328 2499 0.114560 TTTCTCTCTCCCACCCTCGT 59.885 55.0 0.00 0.0 0.00 4.18 F
3372 4442 0.108186 TGGGTAACATGAGAGCAGCG 60.108 55.0 0.00 0.0 39.74 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1646 1772 0.674581 TCCAACGCAGATGAAGCAGG 60.675 55.0 0.00 0.00 29.10 4.85 R
3204 4242 0.037605 GTCCCACCCAGTTACTGACG 60.038 60.0 14.66 5.93 32.44 4.35 R
3731 4811 0.036732 TCAGGCGCTTCTTGGATGTT 59.963 50.0 7.64 0.00 0.00 2.71 R
5014 6373 0.034186 TCCCTGTGAACCATCCATGC 60.034 55.0 0.00 0.00 0.00 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
96 97 2.824689 TTAGGGCATCTTCAATGGCA 57.175 45.000 12.76 0.00 45.13 4.92
101 102 2.590821 GGCATCTTCAATGGCATACCT 58.409 47.619 0.00 0.00 43.15 3.08
118 119 6.018994 GGCATACCTTAAATCAGACACTAACG 60.019 42.308 0.00 0.00 0.00 3.18
154 155 2.225491 TGCGAACACTGATACAAAAGCC 59.775 45.455 0.00 0.00 0.00 4.35
169 170 0.609131 AAGCCGGTCATCCAACCTTG 60.609 55.000 1.90 0.00 37.15 3.61
176 177 0.184692 TCATCCAACCTTGTGCACCA 59.815 50.000 15.69 1.44 0.00 4.17
178 179 1.411977 CATCCAACCTTGTGCACCAAA 59.588 47.619 15.69 1.41 31.20 3.28
179 180 1.786937 TCCAACCTTGTGCACCAAAT 58.213 45.000 15.69 0.00 31.20 2.32
184 185 0.039256 CCTTGTGCACCAAATGTCCG 60.039 55.000 15.69 0.00 31.20 4.79
190 191 0.392461 GCACCAAATGTCCGCCTCTA 60.392 55.000 0.00 0.00 0.00 2.43
200 201 5.819825 ATGTCCGCCTCTATTTTCTTTTC 57.180 39.130 0.00 0.00 0.00 2.29
271 272 7.823149 AATTCTTCAAGCAGTGCAAATATTC 57.177 32.000 19.20 0.00 0.00 1.75
400 413 1.376683 ATGTTCGGCGCCTTAAGCA 60.377 52.632 26.68 17.68 44.04 3.91
466 479 1.616159 CCAACACACCCGAATTCCTT 58.384 50.000 0.00 0.00 0.00 3.36
482 495 6.514012 AATTCCTTGATTTGGGAAAAGGTT 57.486 33.333 0.00 0.00 43.62 3.50
537 553 4.989279 ATGTGGATTTGGGAAAGATTCG 57.011 40.909 0.00 0.00 0.00 3.34
539 555 2.099405 TGGATTTGGGAAAGATTCGCC 58.901 47.619 4.93 0.00 41.47 5.54
540 556 2.099405 GGATTTGGGAAAGATTCGCCA 58.901 47.619 4.93 1.55 41.47 5.69
541 557 2.695147 GGATTTGGGAAAGATTCGCCAT 59.305 45.455 4.93 0.00 41.47 4.40
576 611 8.716646 AAAAATCGTGAATTGGAAAAACTTCT 57.283 26.923 0.00 0.00 0.00 2.85
690 744 9.883142 AGTTCATGTATTTGAAAAGGAAAAACA 57.117 25.926 0.00 0.00 37.36 2.83
696 750 8.731605 TGTATTTGAAAAGGAAAAACAAAACCC 58.268 29.630 0.00 0.00 34.86 4.11
697 751 7.767250 ATTTGAAAAGGAAAAACAAAACCCA 57.233 28.000 0.00 0.00 34.86 4.51
698 752 7.582667 TTTGAAAAGGAAAAACAAAACCCAA 57.417 28.000 0.00 0.00 0.00 4.12
699 753 6.561737 TGAAAAGGAAAAACAAAACCCAAC 57.438 33.333 0.00 0.00 0.00 3.77
700 754 5.473846 TGAAAAGGAAAAACAAAACCCAACC 59.526 36.000 0.00 0.00 0.00 3.77
712 766 1.788229 ACCCAACCTGAAAAACCCAG 58.212 50.000 0.00 0.00 0.00 4.45
784 838 3.442625 GGTGTAAAGAAACCTACATGGGC 59.557 47.826 0.00 0.00 41.11 5.36
788 842 1.453197 GAAACCTACATGGGCCGGG 60.453 63.158 2.18 0.00 41.11 5.73
808 862 4.141846 CGGGCCATATAGCATCTATTGTCT 60.142 45.833 4.39 0.00 0.00 3.41
825 879 1.939785 CTACGAGTTAGCTGGCGCG 60.940 63.158 0.00 0.00 42.32 6.86
826 880 3.405592 TACGAGTTAGCTGGCGCGG 62.406 63.158 8.83 0.00 42.32 6.46
856 910 8.068892 TCTGGAAGAGGAGATAAAGAAGTAAC 57.931 38.462 0.00 0.00 38.67 2.50
876 930 2.361104 GGCCGAGCCCAAATGTGA 60.361 61.111 3.73 0.00 44.06 3.58
901 955 0.798776 GGAGGAGTGTGCGTCATTTG 59.201 55.000 0.00 0.00 0.00 2.32
909 963 1.268999 TGTGCGTCATTTGGCAGAAAC 60.269 47.619 0.00 0.00 40.32 2.78
913 967 0.388520 GTCATTTGGCAGAAACGGGC 60.389 55.000 0.00 0.00 0.00 6.13
914 968 0.825425 TCATTTGGCAGAAACGGGCA 60.825 50.000 0.00 0.00 39.24 5.36
915 969 0.667184 CATTTGGCAGAAACGGGCAC 60.667 55.000 0.00 0.00 40.83 5.01
916 970 0.827507 ATTTGGCAGAAACGGGCACT 60.828 50.000 0.00 0.00 40.83 4.40
917 971 1.452145 TTTGGCAGAAACGGGCACTC 61.452 55.000 0.00 0.00 40.83 3.51
918 972 3.423154 GGCAGAAACGGGCACTCG 61.423 66.667 0.00 0.00 0.00 4.18
919 973 2.665185 GCAGAAACGGGCACTCGT 60.665 61.111 0.00 0.00 46.08 4.18
920 974 2.954753 GCAGAAACGGGCACTCGTG 61.955 63.158 0.00 0.00 43.07 4.35
942 996 3.688086 GGCACGGCCCAATTGTAA 58.312 55.556 4.43 0.00 44.06 2.41
943 997 1.968310 GGCACGGCCCAATTGTAAA 59.032 52.632 4.43 0.00 44.06 2.01
944 998 0.389296 GGCACGGCCCAATTGTAAAC 60.389 55.000 4.43 0.00 44.06 2.01
945 999 0.731174 GCACGGCCCAATTGTAAACG 60.731 55.000 4.43 6.16 0.00 3.60
946 1000 0.594110 CACGGCCCAATTGTAAACGT 59.406 50.000 4.43 6.77 0.00 3.99
947 1001 0.876399 ACGGCCCAATTGTAAACGTC 59.124 50.000 4.43 0.00 0.00 4.34
952 1006 0.806241 CCAATTGTAAACGTCCCGGG 59.194 55.000 16.85 16.85 0.00 5.73
955 1009 2.127027 ATTGTAAACGTCCCGGGCCA 62.127 55.000 18.49 0.00 0.00 5.36
976 1030 4.142093 CCATTTGGCTACCTTTGATTCTGG 60.142 45.833 0.00 0.00 0.00 3.86
980 1034 2.092699 GGCTACCTTTGATTCTGGCTCT 60.093 50.000 0.00 0.00 0.00 4.09
981 1035 3.202097 GCTACCTTTGATTCTGGCTCTC 58.798 50.000 0.00 0.00 0.00 3.20
1001 1055 3.002371 CCCCTGCCTCCTCTTTCC 58.998 66.667 0.00 0.00 0.00 3.13
1010 1064 2.508526 CCTCCTCTTTCCTGTTGGTTG 58.491 52.381 0.00 0.00 34.23 3.77
1035 1092 0.256752 TCCTATCCGTCGTCCTCCAA 59.743 55.000 0.00 0.00 0.00 3.53
1111 1169 2.047274 CCACCGCGTCCACATCTT 60.047 61.111 4.92 0.00 0.00 2.40
1118 1176 0.390340 GCGTCCACATCTTGAGCTCA 60.390 55.000 13.74 13.74 0.00 4.26
1242 1340 2.805099 CAGCCTGATTTATCTTCTCGGC 59.195 50.000 0.00 0.00 36.58 5.54
1275 1373 6.963322 AGCCCTAACACTCTATGATTCTTTT 58.037 36.000 0.00 0.00 0.00 2.27
1283 1381 5.982516 CACTCTATGATTCTTTTCTCTCCGG 59.017 44.000 0.00 0.00 0.00 5.14
1388 1492 1.821332 GAATCCCTCAGGCCTTGCG 60.821 63.158 0.00 0.00 0.00 4.85
1392 1496 3.130160 CCTCAGGCCTTGCGCTTC 61.130 66.667 0.00 0.00 37.74 3.86
1402 1506 1.064654 CCTTGCGCTTCTCATTTAGCC 59.935 52.381 9.73 0.00 33.86 3.93
1541 1658 8.837389 GCAGTTATAAATTAGTAGAAACCAGGG 58.163 37.037 0.00 0.00 0.00 4.45
1564 1681 6.183360 GGGATCTTGAATTTCATTGCCACATA 60.183 38.462 0.00 0.00 0.00 2.29
1579 1696 9.547753 CATTGCCACATATAGTTTACTTCTAGT 57.452 33.333 0.00 0.00 0.00 2.57
1583 1700 7.868415 GCCACATATAGTTTACTTCTAGTCCAG 59.132 40.741 0.00 0.00 0.00 3.86
1597 1714 3.618690 AGTCCAGATGTAACAAGGCTC 57.381 47.619 0.00 0.00 0.00 4.70
1611 1728 0.105246 AGGCTCAGGGGACAGATAGG 60.105 60.000 0.00 0.00 0.00 2.57
1628 1745 5.478679 CAGATAGGTAGGGTCACATCTTAGG 59.521 48.000 0.00 0.00 0.00 2.69
1646 1772 6.608922 TCTTAGGTACATTAGGAGAGGGTAC 58.391 44.000 0.00 0.00 34.93 3.34
1771 1905 8.427774 GGAAACGTATTAGTTGTTACTGTACAC 58.572 37.037 0.00 0.00 35.78 2.90
1827 1961 0.547471 TGCTCCCTCCCAGTCATCAA 60.547 55.000 0.00 0.00 0.00 2.57
1883 2017 2.771943 CTGTTATCTTCTGTAGCCCCCA 59.228 50.000 0.00 0.00 0.00 4.96
1935 2106 6.976934 AAGAACATGTCCCACATAAACTTT 57.023 33.333 0.00 0.00 36.53 2.66
1984 2155 7.465245 GCTCATGCTTTAACACTCTGTTCTATC 60.465 40.741 0.00 0.00 37.73 2.08
2071 2242 1.207488 AGCTAGTCCCAATGGCACCA 61.207 55.000 0.00 0.00 0.00 4.17
2072 2243 1.032114 GCTAGTCCCAATGGCACCAC 61.032 60.000 0.00 0.00 0.00 4.16
2114 2285 1.537202 GTGAACTAGTGGCAAAGGCTG 59.463 52.381 0.00 0.00 40.87 4.85
2272 2443 1.484444 GCAACACCTCTGGGTCCTCT 61.484 60.000 0.00 0.00 45.41 3.69
2327 2498 0.820871 CTTTCTCTCTCCCACCCTCG 59.179 60.000 0.00 0.00 0.00 4.63
2328 2499 0.114560 TTTCTCTCTCCCACCCTCGT 59.885 55.000 0.00 0.00 0.00 4.18
2362 2533 6.373774 AGAATTCAGCTAAAATGAGTGTCAGG 59.626 38.462 8.44 0.00 0.00 3.86
2363 2534 3.942829 TCAGCTAAAATGAGTGTCAGGG 58.057 45.455 0.00 0.00 0.00 4.45
2408 2833 3.728076 TTATGCGGATAGGACTCACAC 57.272 47.619 0.00 0.00 0.00 3.82
2502 2928 5.988561 TGGTGAAGTTGCCATTTTATTGAAC 59.011 36.000 0.00 0.00 0.00 3.18
2591 3619 9.315525 GTTCTGGTGTCTATATAGGAAGAAAAC 57.684 37.037 9.89 0.00 0.00 2.43
2596 3624 9.614792 GGTGTCTATATAGGAAGAAAACACATT 57.385 33.333 21.04 0.00 0.00 2.71
2641 3669 5.479124 TTACAGAAGTCCCTTTACCTGTC 57.521 43.478 0.00 0.00 36.43 3.51
2655 3683 6.872020 CCTTTACCTGTCGATGTTCTTAAGAA 59.128 38.462 13.99 13.99 0.00 2.52
2724 3754 6.892658 TGCAGTTGACTATACCAAAACAAT 57.107 33.333 0.00 0.00 0.00 2.71
2731 3761 7.298507 TGACTATACCAAAACAATAAGACGC 57.701 36.000 0.00 0.00 0.00 5.19
2750 3780 5.041951 ACGCTTAAAATTTGCTCGATTCA 57.958 34.783 0.00 0.00 0.00 2.57
2773 3803 5.808042 TGAATCTCTAGAATGCAAGTTGC 57.192 39.130 21.17 21.17 45.29 4.17
2781 3811 3.689347 AGAATGCAAGTTGCTGTGGATA 58.311 40.909 27.17 6.82 45.31 2.59
2796 3826 7.517320 TGCTGTGGATATTAAGGTAACATCAT 58.483 34.615 0.00 0.00 41.41 2.45
2842 3875 6.279123 TGTTTTGCTGCATCACTTAATCAAA 58.721 32.000 1.84 0.00 0.00 2.69
2853 3886 7.147915 GCATCACTTAATCAAATGGGAGGTTAA 60.148 37.037 0.00 0.00 0.00 2.01
2873 3906 0.687354 AAGGCTGACGAATGACCACT 59.313 50.000 0.00 0.00 0.00 4.00
2885 3918 7.040755 TGACGAATGACCACTGTTTGATAAAAT 60.041 33.333 0.00 0.00 0.00 1.82
2974 4007 2.064762 CTTAGCTGCGATCATAGGCAC 58.935 52.381 0.00 0.00 34.97 5.01
2975 4008 0.318441 TAGCTGCGATCATAGGCACC 59.682 55.000 0.00 0.00 34.97 5.01
3079 4112 5.335976 CCAGGAGAAGATTTAGTGTTTTGCC 60.336 44.000 0.00 0.00 0.00 4.52
3083 4116 6.239036 GGAGAAGATTTAGTGTTTTGCCACTT 60.239 38.462 0.00 0.00 42.99 3.16
3085 4118 8.409358 AGAAGATTTAGTGTTTTGCCACTTAT 57.591 30.769 0.00 0.00 42.99 1.73
3156 4194 4.745620 GGCACGATCCTAGCTTAACTTTAG 59.254 45.833 0.00 0.00 0.00 1.85
3347 4399 3.576078 TGTCCATGTTTCTTCACCAGT 57.424 42.857 0.00 0.00 0.00 4.00
3365 4435 5.586243 CACCAGTATTCTTGGGTAACATGAG 59.414 44.000 0.00 0.00 35.06 2.90
3372 4442 0.108186 TGGGTAACATGAGAGCAGCG 60.108 55.000 0.00 0.00 39.74 5.18
3385 4455 2.617308 AGAGCAGCGGAAAATCATGATG 59.383 45.455 9.46 0.00 0.00 3.07
3521 4597 6.639686 CAGTTTTCTCAAGTTTCATGACATGG 59.360 38.462 15.37 0.00 0.00 3.66
3638 4718 1.192803 GGAGAAGGGAACAGGACCGT 61.193 60.000 0.00 0.00 0.00 4.83
3704 4784 0.250513 AGTTCAATCTGCGGAGGGAC 59.749 55.000 3.37 0.52 0.00 4.46
3731 4811 3.649277 GAAAGCAGCCGAGGAGCGA 62.649 63.158 0.00 0.00 44.57 4.93
3860 4952 0.333312 AGGTGGAGGAGTCAGACGAT 59.667 55.000 0.00 0.00 0.00 3.73
3906 4998 2.295696 GCGACGACAAGTTTAAGCAAC 58.704 47.619 0.00 0.00 35.32 4.17
3968 5067 8.651389 TCCTGGATATTACTTTTCATCACTAGG 58.349 37.037 0.00 0.00 0.00 3.02
3972 5071 8.871125 GGATATTACTTTTCATCACTAGGAGGA 58.129 37.037 0.00 0.00 33.84 3.71
3998 5131 0.842635 ATGATGAGGAAGACTGGGGC 59.157 55.000 0.00 0.00 0.00 5.80
4019 5152 1.670811 CATGAACTAACATCGGGTGCC 59.329 52.381 0.00 0.00 0.00 5.01
4032 5177 2.092049 TCGGGTGCCTAATAGAGACTCA 60.092 50.000 5.02 0.00 0.00 3.41
4082 5227 1.335597 GGCGCCCAGTTAGTTTGTTTC 60.336 52.381 18.11 0.00 0.00 2.78
4153 5299 0.106167 TCTCCTGGACGGTAGATGGG 60.106 60.000 0.00 0.00 0.00 4.00
4154 5300 1.075525 TCCTGGACGGTAGATGGGG 60.076 63.158 0.00 0.00 0.00 4.96
4155 5301 1.075525 CCTGGACGGTAGATGGGGA 60.076 63.158 0.00 0.00 0.00 4.81
4156 5302 1.400530 CCTGGACGGTAGATGGGGAC 61.401 65.000 0.00 0.00 0.00 4.46
4193 5339 4.864247 GCGCATTGGTTTCTTGTTATGAAT 59.136 37.500 0.30 0.00 0.00 2.57
4194 5340 6.033341 GCGCATTGGTTTCTTGTTATGAATA 58.967 36.000 0.30 0.00 0.00 1.75
4226 5381 2.782222 CCTGCTGACATGCCATGCC 61.782 63.158 4.17 0.00 0.00 4.40
4233 5388 1.180029 GACATGCCATGCCTGAAACT 58.820 50.000 4.17 0.00 0.00 2.66
4318 5501 6.215477 ACATAATGTATGAACTCAATCGCG 57.785 37.500 0.00 0.00 39.45 5.87
4331 5514 5.618561 ACTCAATCGCGTAATGTTTCTTTC 58.381 37.500 5.77 0.00 0.00 2.62
4334 5520 4.859629 ATCGCGTAATGTTTCTTTCTCC 57.140 40.909 5.77 0.00 0.00 3.71
4356 5542 5.900123 TCCCACCTTATGTTTCTTTTTGGAA 59.100 36.000 0.00 0.00 0.00 3.53
4357 5543 6.556874 TCCCACCTTATGTTTCTTTTTGGAAT 59.443 34.615 0.00 0.00 0.00 3.01
4365 5551 9.528018 TTATGTTTCTTTTTGGAATCACAACTC 57.472 29.630 0.00 0.00 30.80 3.01
4366 5552 6.929625 TGTTTCTTTTTGGAATCACAACTCA 58.070 32.000 0.00 0.00 0.00 3.41
4429 5616 4.645588 TGGTGGGTTTCGTTTATTTTGACT 59.354 37.500 0.00 0.00 0.00 3.41
4430 5617 5.217393 GGTGGGTTTCGTTTATTTTGACTC 58.783 41.667 0.00 0.00 0.00 3.36
4461 5648 8.858003 TTATGTAAGCAGAAGAAATACTCTCG 57.142 34.615 0.00 0.00 31.02 4.04
4466 5653 6.031751 AGCAGAAGAAATACTCTCGTTTCT 57.968 37.500 0.00 0.00 44.24 2.52
4478 5665 0.028770 TCGTTTCTTGCCGTGCTTTG 59.971 50.000 0.00 0.00 0.00 2.77
4569 5924 8.862325 TTTGAAGGTTATTAGCATCTGAAGAA 57.138 30.769 0.00 0.00 0.00 2.52
4571 5926 7.624549 TGAAGGTTATTAGCATCTGAAGAACT 58.375 34.615 0.00 0.00 29.65 3.01
4573 5928 8.499403 AAGGTTATTAGCATCTGAAGAACTTC 57.501 34.615 7.51 7.51 39.91 3.01
4574 5929 7.624549 AGGTTATTAGCATCTGAAGAACTTCA 58.375 34.615 15.05 15.05 46.27 3.02
4575 5930 7.550906 AGGTTATTAGCATCTGAAGAACTTCAC 59.449 37.037 12.40 4.45 43.90 3.18
4576 5931 7.201652 GGTTATTAGCATCTGAAGAACTTCACC 60.202 40.741 12.40 5.29 43.90 4.02
4577 5932 3.064900 AGCATCTGAAGAACTTCACCC 57.935 47.619 12.40 3.14 43.90 4.61
4579 5934 3.149196 GCATCTGAAGAACTTCACCCAA 58.851 45.455 12.40 1.30 43.90 4.12
4580 5935 3.760684 GCATCTGAAGAACTTCACCCAAT 59.239 43.478 12.40 3.24 43.90 3.16
4581 5936 4.219288 GCATCTGAAGAACTTCACCCAATT 59.781 41.667 12.40 0.00 43.90 2.32
4582 5937 5.415701 GCATCTGAAGAACTTCACCCAATTA 59.584 40.000 12.40 0.00 43.90 1.40
4583 5938 6.623767 GCATCTGAAGAACTTCACCCAATTAC 60.624 42.308 12.40 0.00 43.90 1.89
4584 5939 5.313712 TCTGAAGAACTTCACCCAATTACC 58.686 41.667 12.40 0.00 43.90 2.85
4586 5941 5.313712 TGAAGAACTTCACCCAATTACCTC 58.686 41.667 12.40 0.00 43.90 3.85
4588 5943 5.319043 AGAACTTCACCCAATTACCTCAA 57.681 39.130 0.00 0.00 0.00 3.02
4589 5944 5.701224 AGAACTTCACCCAATTACCTCAAA 58.299 37.500 0.00 0.00 0.00 2.69
4590 5945 6.314917 AGAACTTCACCCAATTACCTCAAAT 58.685 36.000 0.00 0.00 0.00 2.32
4591 5946 5.982890 ACTTCACCCAATTACCTCAAATG 57.017 39.130 0.00 0.00 0.00 2.32
4594 5949 4.006989 TCACCCAATTACCTCAAATGACG 58.993 43.478 0.00 0.00 0.00 4.35
4595 5950 3.128589 CACCCAATTACCTCAAATGACGG 59.871 47.826 0.00 0.00 0.00 4.79
4596 5951 3.009695 ACCCAATTACCTCAAATGACGGA 59.990 43.478 6.08 0.00 0.00 4.69
4599 5954 4.700213 CCAATTACCTCAAATGACGGAACT 59.300 41.667 6.08 0.00 0.00 3.01
4694 6053 5.278660 CCAAACATCTAGCAAGCATAATCCC 60.279 44.000 0.00 0.00 0.00 3.85
4695 6054 4.989875 ACATCTAGCAAGCATAATCCCT 57.010 40.909 0.00 0.00 0.00 4.20
4696 6055 4.904241 ACATCTAGCAAGCATAATCCCTC 58.096 43.478 0.00 0.00 0.00 4.30
4697 6056 4.596643 ACATCTAGCAAGCATAATCCCTCT 59.403 41.667 0.00 0.00 0.00 3.69
4698 6057 5.072872 ACATCTAGCAAGCATAATCCCTCTT 59.927 40.000 0.00 0.00 0.00 2.85
4699 6058 6.270927 ACATCTAGCAAGCATAATCCCTCTTA 59.729 38.462 0.00 0.00 0.00 2.10
4700 6059 6.942163 TCTAGCAAGCATAATCCCTCTTAT 57.058 37.500 0.00 0.00 0.00 1.73
4701 6060 8.481314 CATCTAGCAAGCATAATCCCTCTTATA 58.519 37.037 0.00 0.00 0.00 0.98
4702 6061 8.615360 TCTAGCAAGCATAATCCCTCTTATAT 57.385 34.615 0.00 0.00 0.00 0.86
4703 6062 9.051259 TCTAGCAAGCATAATCCCTCTTATATT 57.949 33.333 0.00 0.00 0.00 1.28
4706 6065 8.830741 AGCAAGCATAATCCCTCTTATATTACT 58.169 33.333 0.00 0.00 0.00 2.24
4707 6066 9.103861 GCAAGCATAATCCCTCTTATATTACTC 57.896 37.037 0.00 0.00 0.00 2.59
4708 6067 9.606631 CAAGCATAATCCCTCTTATATTACTCC 57.393 37.037 0.00 0.00 0.00 3.85
4709 6068 8.325477 AGCATAATCCCTCTTATATTACTCCC 57.675 38.462 0.00 0.00 0.00 4.30
4710 6069 8.132285 AGCATAATCCCTCTTATATTACTCCCT 58.868 37.037 0.00 0.00 0.00 4.20
4711 6070 8.425703 GCATAATCCCTCTTATATTACTCCCTC 58.574 40.741 0.00 0.00 0.00 4.30
4712 6071 8.929487 CATAATCCCTCTTATATTACTCCCTCC 58.071 40.741 0.00 0.00 0.00 4.30
4713 6072 4.931914 TCCCTCTTATATTACTCCCTCCG 58.068 47.826 0.00 0.00 0.00 4.63
4714 6073 4.356190 TCCCTCTTATATTACTCCCTCCGT 59.644 45.833 0.00 0.00 0.00 4.69
4715 6074 5.085219 CCCTCTTATATTACTCCCTCCGTT 58.915 45.833 0.00 0.00 0.00 4.44
4716 6075 5.185442 CCCTCTTATATTACTCCCTCCGTTC 59.815 48.000 0.00 0.00 0.00 3.95
4717 6076 5.185442 CCTCTTATATTACTCCCTCCGTTCC 59.815 48.000 0.00 0.00 0.00 3.62
4718 6077 5.961897 TCTTATATTACTCCCTCCGTTCCT 58.038 41.667 0.00 0.00 0.00 3.36
4719 6078 7.095183 TCTTATATTACTCCCTCCGTTCCTA 57.905 40.000 0.00 0.00 0.00 2.94
4720 6079 7.529555 TCTTATATTACTCCCTCCGTTCCTAA 58.470 38.462 0.00 0.00 0.00 2.69
4721 6080 8.006564 TCTTATATTACTCCCTCCGTTCCTAAA 58.993 37.037 0.00 0.00 0.00 1.85
4722 6081 8.731591 TTATATTACTCCCTCCGTTCCTAAAT 57.268 34.615 0.00 0.00 0.00 1.40
4723 6082 9.827198 TTATATTACTCCCTCCGTTCCTAAATA 57.173 33.333 0.00 0.00 0.00 1.40
4724 6083 8.912614 ATATTACTCCCTCCGTTCCTAAATAT 57.087 34.615 0.00 0.00 0.00 1.28
4726 6085 8.731591 ATTACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
4727 6086 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
4728 6087 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
4729 6088 6.614496 ACTCCCTCCGTTCCTAAATATAAGTT 59.386 38.462 0.00 0.00 0.00 2.66
4730 6089 7.126879 ACTCCCTCCGTTCCTAAATATAAGTTT 59.873 37.037 0.00 0.00 0.00 2.66
4731 6090 7.864770 TCCCTCCGTTCCTAAATATAAGTTTT 58.135 34.615 0.00 0.00 0.00 2.43
4732 6091 8.330993 TCCCTCCGTTCCTAAATATAAGTTTTT 58.669 33.333 0.00 0.00 0.00 1.94
4765 6124 9.778741 ATTCGAATAAGGACTAAATATGAAGCA 57.221 29.630 9.39 0.00 0.00 3.91
4766 6125 9.607988 TTCGAATAAGGACTAAATATGAAGCAA 57.392 29.630 0.00 0.00 0.00 3.91
4767 6126 9.607988 TCGAATAAGGACTAAATATGAAGCAAA 57.392 29.630 0.00 0.00 0.00 3.68
4773 6132 8.814038 AGGACTAAATATGAAGCAAATTGAGT 57.186 30.769 0.00 0.00 28.74 3.41
4774 6133 8.897752 AGGACTAAATATGAAGCAAATTGAGTC 58.102 33.333 0.00 3.99 39.15 3.36
4775 6134 8.677300 GGACTAAATATGAAGCAAATTGAGTCA 58.323 33.333 11.87 0.00 40.62 3.41
4782 6141 7.692460 ATGAAGCAAATTGAGTCAATCTACA 57.308 32.000 18.52 12.68 32.43 2.74
4783 6142 6.902341 TGAAGCAAATTGAGTCAATCTACAC 58.098 36.000 18.52 9.55 32.43 2.90
4784 6143 6.712095 TGAAGCAAATTGAGTCAATCTACACT 59.288 34.615 18.52 9.31 32.43 3.55
4785 6144 6.734104 AGCAAATTGAGTCAATCTACACTC 57.266 37.500 18.52 4.88 39.70 3.51
4786 6145 6.471146 AGCAAATTGAGTCAATCTACACTCT 58.529 36.000 18.52 6.81 39.92 3.24
4787 6146 7.615403 AGCAAATTGAGTCAATCTACACTCTA 58.385 34.615 18.52 0.00 39.92 2.43
4788 6147 8.097038 AGCAAATTGAGTCAATCTACACTCTAA 58.903 33.333 18.52 0.00 39.92 2.10
4789 6148 8.721478 GCAAATTGAGTCAATCTACACTCTAAA 58.279 33.333 18.52 0.00 39.92 1.85
4794 6153 7.749808 TGAGTCAATCTACACTCTAAACTACG 58.250 38.462 0.00 0.00 39.92 3.51
4795 6154 7.389884 TGAGTCAATCTACACTCTAAACTACGT 59.610 37.037 0.00 0.00 39.92 3.57
4796 6155 7.750769 AGTCAATCTACACTCTAAACTACGTC 58.249 38.462 0.00 0.00 0.00 4.34
4797 6156 7.607223 AGTCAATCTACACTCTAAACTACGTCT 59.393 37.037 0.00 0.00 0.00 4.18
4798 6157 8.877779 GTCAATCTACACTCTAAACTACGTCTA 58.122 37.037 0.00 0.00 0.00 2.59
4799 6158 9.610705 TCAATCTACACTCTAAACTACGTCTAT 57.389 33.333 0.00 0.00 0.00 1.98
4813 6172 8.865420 AACTACGTCTATATACATCCATCTGT 57.135 34.615 0.00 0.00 0.00 3.41
4814 6173 9.955102 AACTACGTCTATATACATCCATCTGTA 57.045 33.333 0.00 0.00 36.14 2.74
4815 6174 9.955102 ACTACGTCTATATACATCCATCTGTAA 57.045 33.333 0.00 0.00 35.37 2.41
4860 6219 8.622948 AAAGACTTGTATTTAAGAACAGAGGG 57.377 34.615 0.00 0.00 0.00 4.30
4861 6220 7.554959 AGACTTGTATTTAAGAACAGAGGGA 57.445 36.000 0.00 0.00 0.00 4.20
4862 6221 7.616313 AGACTTGTATTTAAGAACAGAGGGAG 58.384 38.462 0.00 0.00 0.00 4.30
4863 6222 7.235812 AGACTTGTATTTAAGAACAGAGGGAGT 59.764 37.037 0.00 0.00 0.00 3.85
4864 6223 8.431910 ACTTGTATTTAAGAACAGAGGGAGTA 57.568 34.615 0.00 0.00 0.00 2.59
4865 6224 8.312564 ACTTGTATTTAAGAACAGAGGGAGTAC 58.687 37.037 0.00 0.00 0.00 2.73
4866 6225 7.786046 TGTATTTAAGAACAGAGGGAGTACA 57.214 36.000 0.00 0.00 0.00 2.90
4867 6226 8.375493 TGTATTTAAGAACAGAGGGAGTACAT 57.625 34.615 0.00 0.00 0.00 2.29
4868 6227 8.258007 TGTATTTAAGAACAGAGGGAGTACATG 58.742 37.037 0.00 0.00 0.00 3.21
4869 6228 6.928348 TTTAAGAACAGAGGGAGTACATGA 57.072 37.500 0.00 0.00 0.00 3.07
4870 6229 7.496346 TTTAAGAACAGAGGGAGTACATGAT 57.504 36.000 0.00 0.00 0.00 2.45
4871 6230 8.603898 TTTAAGAACAGAGGGAGTACATGATA 57.396 34.615 0.00 0.00 0.00 2.15
4872 6231 6.723298 AAGAACAGAGGGAGTACATGATAG 57.277 41.667 0.00 0.00 0.00 2.08
4873 6232 6.019656 AGAACAGAGGGAGTACATGATAGA 57.980 41.667 0.00 0.00 0.00 1.98
4874 6233 6.436027 AGAACAGAGGGAGTACATGATAGAA 58.564 40.000 0.00 0.00 0.00 2.10
4875 6234 7.072562 AGAACAGAGGGAGTACATGATAGAAT 58.927 38.462 0.00 0.00 0.00 2.40
4876 6235 6.909550 ACAGAGGGAGTACATGATAGAATC 57.090 41.667 0.00 0.00 0.00 2.52
4877 6236 5.777732 ACAGAGGGAGTACATGATAGAATCC 59.222 44.000 0.00 0.00 0.00 3.01
4878 6237 5.777223 CAGAGGGAGTACATGATAGAATCCA 59.223 44.000 0.00 0.00 0.00 3.41
4879 6238 6.268617 CAGAGGGAGTACATGATAGAATCCAA 59.731 42.308 0.00 0.00 0.00 3.53
4880 6239 6.846505 AGAGGGAGTACATGATAGAATCCAAA 59.153 38.462 0.00 0.00 0.00 3.28
4881 6240 6.831976 AGGGAGTACATGATAGAATCCAAAC 58.168 40.000 0.00 0.00 0.00 2.93
4882 6241 5.696724 GGGAGTACATGATAGAATCCAAACG 59.303 44.000 0.00 0.00 0.00 3.60
4883 6242 6.281405 GGAGTACATGATAGAATCCAAACGT 58.719 40.000 0.00 0.00 0.00 3.99
4884 6243 7.431249 GGAGTACATGATAGAATCCAAACGTA 58.569 38.462 0.00 0.00 0.00 3.57
4885 6244 7.595502 GGAGTACATGATAGAATCCAAACGTAG 59.404 40.741 0.00 0.00 0.00 3.51
4886 6245 6.924060 AGTACATGATAGAATCCAAACGTAGC 59.076 38.462 0.00 0.00 0.00 3.58
4887 6246 5.918608 ACATGATAGAATCCAAACGTAGCT 58.081 37.500 0.00 0.00 0.00 3.32
4888 6247 6.349300 ACATGATAGAATCCAAACGTAGCTT 58.651 36.000 0.00 0.00 0.00 3.74
4889 6248 6.823689 ACATGATAGAATCCAAACGTAGCTTT 59.176 34.615 0.00 0.00 0.00 3.51
4890 6249 7.336931 ACATGATAGAATCCAAACGTAGCTTTT 59.663 33.333 0.00 0.00 0.00 2.27
4891 6250 8.826710 CATGATAGAATCCAAACGTAGCTTTTA 58.173 33.333 0.00 0.00 0.00 1.52
4892 6251 8.193250 TGATAGAATCCAAACGTAGCTTTTAC 57.807 34.615 0.00 0.00 0.00 2.01
4893 6252 7.820386 TGATAGAATCCAAACGTAGCTTTTACA 59.180 33.333 0.00 0.00 0.00 2.41
4894 6253 6.870971 AGAATCCAAACGTAGCTTTTACAA 57.129 33.333 0.00 0.00 0.00 2.41
4895 6254 6.899114 AGAATCCAAACGTAGCTTTTACAAG 58.101 36.000 0.00 0.00 0.00 3.16
4896 6255 6.485648 AGAATCCAAACGTAGCTTTTACAAGT 59.514 34.615 0.00 0.00 31.86 3.16
4897 6256 6.628919 ATCCAAACGTAGCTTTTACAAGTT 57.371 33.333 0.00 0.00 31.86 2.66
4898 6257 5.812652 TCCAAACGTAGCTTTTACAAGTTG 58.187 37.500 0.00 0.00 31.86 3.16
4899 6258 4.973663 CCAAACGTAGCTTTTACAAGTTGG 59.026 41.667 7.96 0.00 31.86 3.77
4900 6259 3.891056 ACGTAGCTTTTACAAGTTGGC 57.109 42.857 7.96 0.18 31.86 4.52
4901 6260 3.207778 ACGTAGCTTTTACAAGTTGGCA 58.792 40.909 7.96 0.00 31.86 4.92
4902 6261 3.002965 ACGTAGCTTTTACAAGTTGGCAC 59.997 43.478 7.96 1.79 31.86 5.01
4903 6262 3.002862 CGTAGCTTTTACAAGTTGGCACA 59.997 43.478 7.96 0.00 31.86 4.57
4914 6273 4.653893 TGGCACAAACACAGAGCA 57.346 50.000 0.00 0.00 31.92 4.26
4915 6274 2.879372 TGGCACAAACACAGAGCAA 58.121 47.368 0.00 0.00 31.92 3.91
4916 6275 1.180907 TGGCACAAACACAGAGCAAA 58.819 45.000 0.00 0.00 31.92 3.68
4917 6276 1.547820 TGGCACAAACACAGAGCAAAA 59.452 42.857 0.00 0.00 31.92 2.44
4918 6277 2.195922 GGCACAAACACAGAGCAAAAG 58.804 47.619 0.00 0.00 0.00 2.27
4919 6278 2.159254 GGCACAAACACAGAGCAAAAGA 60.159 45.455 0.00 0.00 0.00 2.52
4920 6279 3.510719 GCACAAACACAGAGCAAAAGAA 58.489 40.909 0.00 0.00 0.00 2.52
4921 6280 3.304293 GCACAAACACAGAGCAAAAGAAC 59.696 43.478 0.00 0.00 0.00 3.01
4922 6281 4.484236 CACAAACACAGAGCAAAAGAACA 58.516 39.130 0.00 0.00 0.00 3.18
4923 6282 5.104374 CACAAACACAGAGCAAAAGAACAT 58.896 37.500 0.00 0.00 0.00 2.71
4924 6283 5.230726 CACAAACACAGAGCAAAAGAACATC 59.769 40.000 0.00 0.00 0.00 3.06
4925 6284 5.105797 ACAAACACAGAGCAAAAGAACATCA 60.106 36.000 0.00 0.00 0.00 3.07
4926 6285 4.558538 ACACAGAGCAAAAGAACATCAC 57.441 40.909 0.00 0.00 0.00 3.06
4927 6286 3.316308 ACACAGAGCAAAAGAACATCACC 59.684 43.478 0.00 0.00 0.00 4.02
4928 6287 3.316029 CACAGAGCAAAAGAACATCACCA 59.684 43.478 0.00 0.00 0.00 4.17
4929 6288 4.022589 CACAGAGCAAAAGAACATCACCAT 60.023 41.667 0.00 0.00 0.00 3.55
4930 6289 4.217118 ACAGAGCAAAAGAACATCACCATC 59.783 41.667 0.00 0.00 0.00 3.51
4931 6290 4.216902 CAGAGCAAAAGAACATCACCATCA 59.783 41.667 0.00 0.00 0.00 3.07
4932 6291 4.828939 AGAGCAAAAGAACATCACCATCAA 59.171 37.500 0.00 0.00 0.00 2.57
4933 6292 4.874970 AGCAAAAGAACATCACCATCAAC 58.125 39.130 0.00 0.00 0.00 3.18
4934 6293 3.989817 GCAAAAGAACATCACCATCAACC 59.010 43.478 0.00 0.00 0.00 3.77
4935 6294 4.501229 GCAAAAGAACATCACCATCAACCA 60.501 41.667 0.00 0.00 0.00 3.67
4936 6295 5.786311 CAAAAGAACATCACCATCAACCAT 58.214 37.500 0.00 0.00 0.00 3.55
4937 6296 5.649782 AAAGAACATCACCATCAACCATC 57.350 39.130 0.00 0.00 0.00 3.51
4938 6297 4.305539 AGAACATCACCATCAACCATCA 57.694 40.909 0.00 0.00 0.00 3.07
4939 6298 4.863548 AGAACATCACCATCAACCATCAT 58.136 39.130 0.00 0.00 0.00 2.45
4940 6299 6.005066 AGAACATCACCATCAACCATCATA 57.995 37.500 0.00 0.00 0.00 2.15
4941 6300 6.425735 AGAACATCACCATCAACCATCATAA 58.574 36.000 0.00 0.00 0.00 1.90
4942 6301 7.064866 AGAACATCACCATCAACCATCATAAT 58.935 34.615 0.00 0.00 0.00 1.28
4943 6302 7.562454 AGAACATCACCATCAACCATCATAATT 59.438 33.333 0.00 0.00 0.00 1.40
4944 6303 8.765488 AACATCACCATCAACCATCATAATTA 57.235 30.769 0.00 0.00 0.00 1.40
4945 6304 8.400184 ACATCACCATCAACCATCATAATTAG 57.600 34.615 0.00 0.00 0.00 1.73
4946 6305 8.000709 ACATCACCATCAACCATCATAATTAGT 58.999 33.333 0.00 0.00 0.00 2.24
4947 6306 9.506018 CATCACCATCAACCATCATAATTAGTA 57.494 33.333 0.00 0.00 0.00 1.82
4949 6308 9.913310 TCACCATCAACCATCATAATTAGTAAA 57.087 29.630 0.00 0.00 0.00 2.01
4952 6311 9.965824 CCATCAACCATCATAATTAGTAAAACC 57.034 33.333 0.00 0.00 0.00 3.27
5006 6365 9.665264 AACAAAGACTAAAATTTCATCGTCTTC 57.335 29.630 17.25 0.00 39.86 2.87
5007 6366 8.836413 ACAAAGACTAAAATTTCATCGTCTTCA 58.164 29.630 17.25 0.00 39.86 3.02
5008 6367 9.831737 CAAAGACTAAAATTTCATCGTCTTCAT 57.168 29.630 17.25 7.16 39.86 2.57
5010 6369 8.777865 AGACTAAAATTTCATCGTCTTCATCA 57.222 30.769 0.00 0.00 0.00 3.07
5011 6370 8.660373 AGACTAAAATTTCATCGTCTTCATCAC 58.340 33.333 0.00 0.00 0.00 3.06
5012 6371 8.322906 ACTAAAATTTCATCGTCTTCATCACA 57.677 30.769 0.00 0.00 0.00 3.58
5013 6372 8.230486 ACTAAAATTTCATCGTCTTCATCACAC 58.770 33.333 0.00 0.00 0.00 3.82
5014 6373 4.847365 ATTTCATCGTCTTCATCACACG 57.153 40.909 0.00 0.00 34.78 4.49
5015 6374 1.629013 TCATCGTCTTCATCACACGC 58.371 50.000 0.00 0.00 33.46 5.34
5016 6375 1.067915 TCATCGTCTTCATCACACGCA 60.068 47.619 0.00 0.00 33.46 5.24
5017 6376 1.929169 CATCGTCTTCATCACACGCAT 59.071 47.619 0.00 0.00 33.46 4.73
5018 6377 1.349234 TCGTCTTCATCACACGCATG 58.651 50.000 0.00 0.00 33.46 4.06
5019 6378 0.371301 CGTCTTCATCACACGCATGG 59.629 55.000 0.00 0.00 0.00 3.66
5020 6379 1.725641 GTCTTCATCACACGCATGGA 58.274 50.000 0.00 0.00 0.00 3.41
5021 6380 2.283298 GTCTTCATCACACGCATGGAT 58.717 47.619 0.00 0.00 0.00 3.41
5022 6381 2.031314 GTCTTCATCACACGCATGGATG 59.969 50.000 5.28 5.28 39.75 3.51
5023 6382 1.332686 CTTCATCACACGCATGGATGG 59.667 52.381 10.10 0.00 39.07 3.51
5024 6383 0.252761 TCATCACACGCATGGATGGT 59.747 50.000 10.10 0.00 39.07 3.55
5025 6384 1.097232 CATCACACGCATGGATGGTT 58.903 50.000 0.00 0.00 35.83 3.67
5026 6385 1.064505 CATCACACGCATGGATGGTTC 59.935 52.381 0.00 0.00 35.83 3.62
5027 6386 0.036022 TCACACGCATGGATGGTTCA 59.964 50.000 0.00 0.00 0.00 3.18
5028 6387 0.168788 CACACGCATGGATGGTTCAC 59.831 55.000 0.00 0.00 0.00 3.18
5029 6388 0.250684 ACACGCATGGATGGTTCACA 60.251 50.000 0.00 0.00 0.00 3.58
5030 6389 0.448990 CACGCATGGATGGTTCACAG 59.551 55.000 0.00 0.00 0.00 3.66
5031 6390 0.677731 ACGCATGGATGGTTCACAGG 60.678 55.000 0.00 0.00 0.00 4.00
5032 6391 1.378882 CGCATGGATGGTTCACAGGG 61.379 60.000 0.00 0.00 0.00 4.45
5033 6392 0.034186 GCATGGATGGTTCACAGGGA 60.034 55.000 0.00 0.00 0.00 4.20
5034 6393 1.755179 CATGGATGGTTCACAGGGAC 58.245 55.000 0.00 0.00 0.00 4.46
5035 6394 1.004628 CATGGATGGTTCACAGGGACA 59.995 52.381 0.00 0.00 0.00 4.02
5036 6395 1.144691 TGGATGGTTCACAGGGACAA 58.855 50.000 0.00 0.00 0.00 3.18
5037 6396 1.496857 TGGATGGTTCACAGGGACAAA 59.503 47.619 0.00 0.00 0.00 2.83
5038 6397 2.091610 TGGATGGTTCACAGGGACAAAA 60.092 45.455 0.00 0.00 0.00 2.44
5039 6398 2.296190 GGATGGTTCACAGGGACAAAAC 59.704 50.000 0.00 0.00 0.00 2.43
5040 6399 1.770294 TGGTTCACAGGGACAAAACC 58.230 50.000 0.00 0.00 39.84 3.27
5041 6400 1.006043 TGGTTCACAGGGACAAAACCA 59.994 47.619 1.31 1.31 45.25 3.67
5042 6401 2.104170 GGTTCACAGGGACAAAACCAA 58.896 47.619 0.00 0.00 39.33 3.67
5043 6402 2.159156 GGTTCACAGGGACAAAACCAAC 60.159 50.000 0.00 0.00 39.33 3.77
5044 6403 2.494073 GTTCACAGGGACAAAACCAACA 59.506 45.455 0.00 0.00 0.00 3.33
5045 6404 3.025322 TCACAGGGACAAAACCAACAT 57.975 42.857 0.00 0.00 0.00 2.71
5046 6405 2.955660 TCACAGGGACAAAACCAACATC 59.044 45.455 0.00 0.00 0.00 3.06
5047 6406 2.035832 CACAGGGACAAAACCAACATCC 59.964 50.000 0.00 0.00 0.00 3.51
5050 6409 2.812358 GGACAAAACCAACATCCCAC 57.188 50.000 0.00 0.00 0.00 4.61
5051 6410 1.343142 GGACAAAACCAACATCCCACC 59.657 52.381 0.00 0.00 0.00 4.61
5052 6411 1.000717 GACAAAACCAACATCCCACCG 60.001 52.381 0.00 0.00 0.00 4.94
5053 6412 0.319469 CAAAACCAACATCCCACCGC 60.319 55.000 0.00 0.00 0.00 5.68
5054 6413 1.468506 AAAACCAACATCCCACCGCC 61.469 55.000 0.00 0.00 0.00 6.13
5055 6414 3.879180 AACCAACATCCCACCGCCC 62.879 63.158 0.00 0.00 0.00 6.13
5056 6415 4.047125 CCAACATCCCACCGCCCT 62.047 66.667 0.00 0.00 0.00 5.19
5057 6416 2.035626 CAACATCCCACCGCCCTT 59.964 61.111 0.00 0.00 0.00 3.95
5058 6417 2.046285 CAACATCCCACCGCCCTTC 61.046 63.158 0.00 0.00 0.00 3.46
5059 6418 2.534396 AACATCCCACCGCCCTTCA 61.534 57.895 0.00 0.00 0.00 3.02
5060 6419 1.863155 AACATCCCACCGCCCTTCAT 61.863 55.000 0.00 0.00 0.00 2.57
5061 6420 1.076777 CATCCCACCGCCCTTCATT 60.077 57.895 0.00 0.00 0.00 2.57
5062 6421 1.076777 ATCCCACCGCCCTTCATTG 60.077 57.895 0.00 0.00 0.00 2.82
5063 6422 3.451894 CCCACCGCCCTTCATTGC 61.452 66.667 0.00 0.00 0.00 3.56
5064 6423 2.361610 CCACCGCCCTTCATTGCT 60.362 61.111 0.00 0.00 0.00 3.91
5065 6424 2.409870 CCACCGCCCTTCATTGCTC 61.410 63.158 0.00 0.00 0.00 4.26
5066 6425 2.044946 ACCGCCCTTCATTGCTCC 60.045 61.111 0.00 0.00 0.00 4.70
5067 6426 2.045045 CCGCCCTTCATTGCTCCA 60.045 61.111 0.00 0.00 0.00 3.86
5068 6427 2.117156 CCGCCCTTCATTGCTCCAG 61.117 63.158 0.00 0.00 0.00 3.86
5069 6428 2.768492 CGCCCTTCATTGCTCCAGC 61.768 63.158 0.00 0.00 42.50 4.85
5085 6444 6.669125 GCTCCAGCATATATCATAGAGGAT 57.331 41.667 0.00 0.00 41.59 3.24
5086 6445 7.773489 GCTCCAGCATATATCATAGAGGATA 57.227 40.000 0.00 0.00 41.59 2.59
5087 6446 8.187913 GCTCCAGCATATATCATAGAGGATAA 57.812 38.462 0.00 0.00 41.59 1.75
5088 6447 8.814931 GCTCCAGCATATATCATAGAGGATAAT 58.185 37.037 0.00 0.00 41.59 1.28
5099 6458 7.739995 TCATAGAGGATAATATGGGTCTTGG 57.260 40.000 0.00 0.00 31.58 3.61
5100 6459 4.917906 AGAGGATAATATGGGTCTTGGC 57.082 45.455 0.00 0.00 0.00 4.52
5101 6460 4.242811 AGAGGATAATATGGGTCTTGGCA 58.757 43.478 0.00 0.00 0.00 4.92
5102 6461 4.854436 AGAGGATAATATGGGTCTTGGCAT 59.146 41.667 0.00 0.00 0.00 4.40
5103 6462 5.314306 AGAGGATAATATGGGTCTTGGCATT 59.686 40.000 0.00 0.00 0.00 3.56
5104 6463 5.969086 AGGATAATATGGGTCTTGGCATTT 58.031 37.500 0.00 0.00 0.00 2.32
5105 6464 6.012745 AGGATAATATGGGTCTTGGCATTTC 58.987 40.000 0.00 0.00 0.00 2.17
5106 6465 6.012745 GGATAATATGGGTCTTGGCATTTCT 58.987 40.000 0.00 0.00 0.00 2.52
5107 6466 7.018550 AGGATAATATGGGTCTTGGCATTTCTA 59.981 37.037 0.00 0.00 0.00 2.10
5108 6467 7.669722 GGATAATATGGGTCTTGGCATTTCTAA 59.330 37.037 0.00 0.00 0.00 2.10
5109 6468 9.247861 GATAATATGGGTCTTGGCATTTCTAAT 57.752 33.333 0.00 0.00 0.00 1.73
5110 6469 7.530426 AATATGGGTCTTGGCATTTCTAATC 57.470 36.000 0.00 0.00 0.00 1.75
5111 6470 3.631250 TGGGTCTTGGCATTTCTAATCC 58.369 45.455 0.00 0.00 0.00 3.01
5112 6471 2.959030 GGGTCTTGGCATTTCTAATCCC 59.041 50.000 0.00 0.00 0.00 3.85
5113 6472 3.627237 GGGTCTTGGCATTTCTAATCCCA 60.627 47.826 0.00 0.00 33.11 4.37
5114 6473 3.633986 GGTCTTGGCATTTCTAATCCCAG 59.366 47.826 0.00 0.00 0.00 4.45
5115 6474 3.067320 GTCTTGGCATTTCTAATCCCAGC 59.933 47.826 0.00 0.00 0.00 4.85
5116 6475 2.824689 TGGCATTTCTAATCCCAGCA 57.175 45.000 0.00 0.00 0.00 4.41
5117 6476 2.658285 TGGCATTTCTAATCCCAGCAG 58.342 47.619 0.00 0.00 0.00 4.24
5118 6477 2.241941 TGGCATTTCTAATCCCAGCAGA 59.758 45.455 0.00 0.00 0.00 4.26
5119 6478 3.117398 TGGCATTTCTAATCCCAGCAGAT 60.117 43.478 0.00 0.00 0.00 2.90
5120 6479 4.104579 TGGCATTTCTAATCCCAGCAGATA 59.895 41.667 0.00 0.00 0.00 1.98
5121 6480 4.457257 GGCATTTCTAATCCCAGCAGATAC 59.543 45.833 0.00 0.00 0.00 2.24
5122 6481 5.312079 GCATTTCTAATCCCAGCAGATACT 58.688 41.667 0.00 0.00 0.00 2.12
5123 6482 5.411053 GCATTTCTAATCCCAGCAGATACTC 59.589 44.000 0.00 0.00 0.00 2.59
5124 6483 6.743773 GCATTTCTAATCCCAGCAGATACTCT 60.744 42.308 0.00 0.00 0.00 3.24
5125 6484 5.798125 TTCTAATCCCAGCAGATACTCTG 57.202 43.478 0.00 0.00 46.90 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 89 6.318648 GTGTCTGATTTAAGGTATGCCATTGA 59.681 38.462 1.54 0.00 37.19 2.57
92 93 5.435686 AGTGTCTGATTTAAGGTATGCCA 57.564 39.130 1.54 0.00 37.19 4.92
96 97 7.093640 TGGACGTTAGTGTCTGATTTAAGGTAT 60.094 37.037 0.00 0.00 38.91 2.73
101 102 5.872617 CCATGGACGTTAGTGTCTGATTTAA 59.127 40.000 5.56 0.00 38.91 1.52
118 119 3.188786 GCAGACGCGTCCATGGAC 61.189 66.667 34.08 31.59 41.40 4.02
130 131 4.702392 CTTTTGTATCAGTGTTCGCAGAC 58.298 43.478 0.00 0.00 34.32 3.51
133 134 2.225491 GGCTTTTGTATCAGTGTTCGCA 59.775 45.455 0.00 0.00 0.00 5.10
134 135 2.724839 CGGCTTTTGTATCAGTGTTCGC 60.725 50.000 0.00 0.00 0.00 4.70
154 155 0.888736 TGCACAAGGTTGGATGACCG 60.889 55.000 0.00 0.00 44.62 4.79
169 170 2.200170 GAGGCGGACATTTGGTGCAC 62.200 60.000 8.80 8.80 37.78 4.57
176 177 6.434340 AGAAAAGAAAATAGAGGCGGACATTT 59.566 34.615 0.00 0.00 0.00 2.32
178 179 5.501156 AGAAAAGAAAATAGAGGCGGACAT 58.499 37.500 0.00 0.00 0.00 3.06
179 180 4.906618 AGAAAAGAAAATAGAGGCGGACA 58.093 39.130 0.00 0.00 0.00 4.02
184 185 7.042389 CGGACATAGAGAAAAGAAAATAGAGGC 60.042 40.741 0.00 0.00 0.00 4.70
190 191 6.206634 TGTTGCGGACATAGAGAAAAGAAAAT 59.793 34.615 0.00 0.00 32.00 1.82
200 201 2.654749 TGAGTGTTGCGGACATAGAG 57.345 50.000 0.00 0.00 41.10 2.43
241 242 9.880157 ATTTGCACTGCTTGAAGAATTATTTAT 57.120 25.926 1.98 0.00 0.00 1.40
338 339 5.885881 TGAACGAGTAAAAATGTGCAACTT 58.114 33.333 0.00 0.00 38.04 2.66
340 341 6.747659 AATGAACGAGTAAAAATGTGCAAC 57.252 33.333 0.00 0.00 37.35 4.17
400 413 2.143925 GCGCCAGTTGAGAAACTTAGT 58.856 47.619 0.00 0.00 0.00 2.24
444 457 0.879090 GAATTCGGGTGTGTTGGGTC 59.121 55.000 0.00 0.00 0.00 4.46
456 469 4.799564 TTTCCCAAATCAAGGAATTCGG 57.200 40.909 0.00 0.00 41.69 4.30
458 471 6.114187 ACCTTTTCCCAAATCAAGGAATTC 57.886 37.500 3.80 0.00 41.69 2.17
466 479 5.683876 TTTGTGAACCTTTTCCCAAATCA 57.316 34.783 0.00 0.00 35.09 2.57
519 535 2.099405 GGCGAATCTTTCCCAAATCCA 58.901 47.619 0.00 0.00 0.00 3.41
521 537 4.391405 AATGGCGAATCTTTCCCAAATC 57.609 40.909 0.00 0.00 34.93 2.17
553 587 7.224557 CCAAGAAGTTTTTCCAATTCACGATTT 59.775 33.333 0.00 0.00 33.64 2.17
554 588 6.701400 CCAAGAAGTTTTTCCAATTCACGATT 59.299 34.615 0.00 0.00 33.64 3.34
555 589 6.040391 TCCAAGAAGTTTTTCCAATTCACGAT 59.960 34.615 0.00 0.00 33.64 3.73
591 626 7.967890 ATGAACTTTTTCCCAATTCATGAAC 57.032 32.000 11.07 0.00 38.31 3.18
599 653 8.977267 TTCAAATTCATGAACTTTTTCCCAAT 57.023 26.923 11.07 0.00 34.50 3.16
682 736 4.209307 TCAGGTTGGGTTTTGTTTTTCC 57.791 40.909 0.00 0.00 0.00 3.13
683 737 6.561737 TTTTCAGGTTGGGTTTTGTTTTTC 57.438 33.333 0.00 0.00 0.00 2.29
687 741 4.328536 GGTTTTTCAGGTTGGGTTTTGTT 58.671 39.130 0.00 0.00 0.00 2.83
688 742 3.307833 GGGTTTTTCAGGTTGGGTTTTGT 60.308 43.478 0.00 0.00 0.00 2.83
689 743 3.275143 GGGTTTTTCAGGTTGGGTTTTG 58.725 45.455 0.00 0.00 0.00 2.44
690 744 2.913617 TGGGTTTTTCAGGTTGGGTTTT 59.086 40.909 0.00 0.00 0.00 2.43
691 745 2.503765 CTGGGTTTTTCAGGTTGGGTTT 59.496 45.455 0.00 0.00 0.00 3.27
692 746 2.115427 CTGGGTTTTTCAGGTTGGGTT 58.885 47.619 0.00 0.00 0.00 4.11
693 747 1.289530 TCTGGGTTTTTCAGGTTGGGT 59.710 47.619 0.00 0.00 33.36 4.51
694 748 1.963515 CTCTGGGTTTTTCAGGTTGGG 59.036 52.381 0.00 0.00 33.36 4.12
695 749 2.944129 TCTCTGGGTTTTTCAGGTTGG 58.056 47.619 0.00 0.00 33.36 3.77
696 750 5.109210 GTTTTCTCTGGGTTTTTCAGGTTG 58.891 41.667 0.00 0.00 33.36 3.77
697 751 4.161565 GGTTTTCTCTGGGTTTTTCAGGTT 59.838 41.667 0.00 0.00 33.36 3.50
698 752 3.704566 GGTTTTCTCTGGGTTTTTCAGGT 59.295 43.478 0.00 0.00 33.36 4.00
699 753 3.243401 CGGTTTTCTCTGGGTTTTTCAGG 60.243 47.826 0.00 0.00 33.36 3.86
700 754 3.795488 GCGGTTTTCTCTGGGTTTTTCAG 60.795 47.826 0.00 0.00 0.00 3.02
755 809 3.888583 AGGTTTCTTTACACCGGTTTCA 58.111 40.909 2.97 0.00 38.21 2.69
764 818 3.692690 GGCCCATGTAGGTTTCTTTACA 58.307 45.455 0.00 0.00 34.57 2.41
784 838 3.118261 ACAATAGATGCTATATGGCCCGG 60.118 47.826 8.76 0.00 0.00 5.73
788 842 6.796426 TCGTAGACAATAGATGCTATATGGC 58.204 40.000 3.73 3.73 0.00 4.40
797 851 6.146216 CCAGCTAACTCGTAGACAATAGATG 58.854 44.000 0.00 0.00 31.43 2.90
808 862 2.101575 CGCGCCAGCTAACTCGTA 59.898 61.111 0.00 0.00 42.32 3.43
826 880 0.030603 ATCTCCTCTTCCAGACCCCC 60.031 60.000 0.00 0.00 0.00 5.40
827 881 2.777459 TATCTCCTCTTCCAGACCCC 57.223 55.000 0.00 0.00 0.00 4.95
828 882 4.290942 TCTTTATCTCCTCTTCCAGACCC 58.709 47.826 0.00 0.00 0.00 4.46
875 929 1.599576 GCACACTCCTCCCCTCTTC 59.400 63.158 0.00 0.00 0.00 2.87
876 930 2.286523 CGCACACTCCTCCCCTCTT 61.287 63.158 0.00 0.00 0.00 2.85
901 955 3.423154 CGAGTGCCCGTTTCTGCC 61.423 66.667 0.00 0.00 0.00 4.85
926 980 0.731174 CGTTTACAATTGGGCCGTGC 60.731 55.000 10.83 0.00 0.00 5.34
927 981 0.594110 ACGTTTACAATTGGGCCGTG 59.406 50.000 10.83 0.00 0.00 4.94
928 982 0.876399 GACGTTTACAATTGGGCCGT 59.124 50.000 10.83 11.77 0.00 5.68
929 983 0.169451 GGACGTTTACAATTGGGCCG 59.831 55.000 10.83 8.71 0.00 6.13
930 984 0.528924 GGGACGTTTACAATTGGGCC 59.471 55.000 10.83 0.00 0.00 5.80
955 1009 3.448660 GCCAGAATCAAAGGTAGCCAAAT 59.551 43.478 0.00 0.00 0.00 2.32
1001 1055 1.358152 TAGGAGGACCCAACCAACAG 58.642 55.000 0.00 0.00 37.41 3.16
1010 1064 1.152798 ACGACGGATAGGAGGACCC 60.153 63.158 0.00 0.00 36.73 4.46
1111 1169 0.972134 GGATGGGATCGATGAGCTCA 59.028 55.000 20.79 20.79 31.32 4.26
1118 1176 2.276116 CGGACGGGATGGGATCGAT 61.276 63.158 0.00 0.00 0.00 3.59
1242 1340 1.067354 AGTGTTAGGGCTTTCGTACCG 60.067 52.381 0.00 0.00 0.00 4.02
1275 1373 1.544825 CCTGAAGCAACCCGGAGAGA 61.545 60.000 0.73 0.00 0.00 3.10
1283 1381 2.054453 GGGATGGCCTGAAGCAACC 61.054 63.158 3.32 0.00 46.50 3.77
1388 1492 2.686915 ACATGCTGGCTAAATGAGAAGC 59.313 45.455 0.00 0.00 37.08 3.86
1392 1496 3.693085 AGTTCACATGCTGGCTAAATGAG 59.307 43.478 0.00 0.00 0.00 2.90
1446 1555 3.135530 AGAGGAGAGGCATCACATTAACC 59.864 47.826 0.00 0.00 0.00 2.85
1447 1556 4.100808 AGAGAGGAGAGGCATCACATTAAC 59.899 45.833 0.00 0.00 0.00 2.01
1532 1649 5.982890 TGAAATTCAAGATCCCTGGTTTC 57.017 39.130 0.00 12.33 0.00 2.78
1541 1658 9.622004 CTATATGTGGCAATGAAATTCAAGATC 57.378 33.333 0.00 0.00 31.22 2.75
1579 1696 2.237143 CCTGAGCCTTGTTACATCTGGA 59.763 50.000 4.31 0.00 32.45 3.86
1583 1700 1.559682 TCCCCTGAGCCTTGTTACATC 59.440 52.381 0.00 0.00 0.00 3.06
1585 1702 0.690762 GTCCCCTGAGCCTTGTTACA 59.309 55.000 0.00 0.00 0.00 2.41
1597 1714 1.220750 ACCCTACCTATCTGTCCCCTG 59.779 57.143 0.00 0.00 0.00 4.45
1611 1728 6.481434 AATGTACCTAAGATGTGACCCTAC 57.519 41.667 0.00 0.00 0.00 3.18
1628 1745 3.321396 GCAGGTACCCTCTCCTAATGTAC 59.679 52.174 8.74 0.00 32.26 2.90
1646 1772 0.674581 TCCAACGCAGATGAAGCAGG 60.675 55.000 0.00 0.00 29.10 4.85
1712 1839 8.434661 CAACCTCGTGAAAAATGGAATAATTTG 58.565 33.333 0.00 0.00 30.21 2.32
1809 1943 0.842635 ATTGATGACTGGGAGGGAGC 59.157 55.000 0.00 0.00 0.00 4.70
1827 1961 6.101734 TGGACCTGGAAATAGCAAGAATAGAT 59.898 38.462 0.00 0.00 0.00 1.98
1883 2017 7.725251 TGCAATTGAAATTCCTAGTTGTCTTT 58.275 30.769 10.34 0.00 0.00 2.52
1935 2106 7.633789 AGCTAAGGATAGGAATTTTCACTTCA 58.366 34.615 0.00 0.00 0.00 3.02
2071 2242 4.660938 GAAGCCCTTGCCGGTGGT 62.661 66.667 1.90 0.00 38.69 4.16
2072 2243 4.351054 AGAAGCCCTTGCCGGTGG 62.351 66.667 1.90 3.04 38.69 4.61
2085 2256 2.872038 GCCACTAGTTCACCACCAGAAG 60.872 54.545 0.00 0.00 0.00 2.85
2272 2443 2.752358 CCAGAGCCAGAACCAGCA 59.248 61.111 0.00 0.00 0.00 4.41
2327 2498 7.435068 TTTTAGCTGAATTCTCCACTTGTAC 57.565 36.000 7.05 0.00 0.00 2.90
2328 2499 7.882791 TCATTTTAGCTGAATTCTCCACTTGTA 59.117 33.333 7.05 0.00 0.00 2.41
2502 2928 8.204160 AGACCCAAAATTTCCTTTAAGACAAAG 58.796 33.333 0.00 0.00 0.00 2.77
2564 2991 8.840200 TTTCTTCCTATATAGACACCAGAACT 57.160 34.615 11.53 0.00 0.00 3.01
2568 2995 8.258007 TGTGTTTTCTTCCTATATAGACACCAG 58.742 37.037 18.57 6.68 0.00 4.00
2581 3601 4.685924 CAAGCACAATGTGTTTTCTTCCT 58.314 39.130 12.70 0.00 34.94 3.36
2582 3602 3.245990 GCAAGCACAATGTGTTTTCTTCC 59.754 43.478 12.70 0.00 34.94 3.46
2583 3603 3.061006 CGCAAGCACAATGTGTTTTCTTC 60.061 43.478 12.70 2.78 34.94 2.87
2591 3619 4.768659 TTTTTAACGCAAGCACAATGTG 57.231 36.364 9.36 9.36 45.62 3.21
2628 3656 3.170717 AGAACATCGACAGGTAAAGGGA 58.829 45.455 0.00 0.00 0.00 4.20
2641 3669 9.227490 CTACTGTCAGTATTCTTAAGAACATCG 57.773 37.037 19.94 9.60 36.80 3.84
2655 3683 7.727181 ACTCAAGTGTTTTCTACTGTCAGTAT 58.273 34.615 13.10 0.00 29.08 2.12
2671 3701 7.862372 CAGCATACACAAAATTTACTCAAGTGT 59.138 33.333 0.00 0.00 41.15 3.55
2724 3754 5.849357 TCGAGCAAATTTTAAGCGTCTTA 57.151 34.783 0.00 0.00 0.00 2.10
2729 3759 5.738693 TCATGAATCGAGCAAATTTTAAGCG 59.261 36.000 0.00 0.00 0.00 4.68
2750 3780 6.374565 GCAACTTGCATTCTAGAGATTCAT 57.625 37.500 8.97 0.00 44.26 2.57
2773 3803 9.559732 TCAATGATGTTACCTTAATATCCACAG 57.440 33.333 1.60 0.00 36.00 3.66
2808 3841 7.330208 AGTGATGCAGCAAAACATATTCTTTTC 59.670 33.333 6.05 0.00 0.00 2.29
2842 3875 2.618045 CGTCAGCCTTTTAACCTCCCAT 60.618 50.000 0.00 0.00 0.00 4.00
2853 3886 1.072331 AGTGGTCATTCGTCAGCCTTT 59.928 47.619 0.00 0.00 0.00 3.11
2885 3918 9.599866 CACATCATAACTTAATAGACCTTCACA 57.400 33.333 0.00 0.00 0.00 3.58
2974 4007 6.769341 TGGAACTTCTGATTATCATGTGATGG 59.231 38.462 5.78 0.00 36.05 3.51
2975 4008 7.498239 ACTGGAACTTCTGATTATCATGTGATG 59.502 37.037 5.78 0.00 36.05 3.07
3156 4194 4.319766 CCACACACAAGTCAATAGCAGTTC 60.320 45.833 0.00 0.00 0.00 3.01
3204 4242 0.037605 GTCCCACCCAGTTACTGACG 60.038 60.000 14.66 5.93 32.44 4.35
3319 4368 7.232330 TGGTGAAGAAACATGGACAAAATATGA 59.768 33.333 0.00 0.00 0.00 2.15
3347 4399 5.674525 CTGCTCTCATGTTACCCAAGAATA 58.325 41.667 0.00 0.00 0.00 1.75
3365 4435 2.357009 ACATCATGATTTTCCGCTGCTC 59.643 45.455 5.16 0.00 0.00 4.26
3372 4442 8.776376 ACCAAATACAAACATCATGATTTTCC 57.224 30.769 5.16 0.00 0.00 3.13
3385 4455 5.278808 GGAACAGGAGGAACCAAATACAAAC 60.279 44.000 0.00 0.00 42.04 2.93
3521 4597 9.399403 GTTTCCATTCAAGTTCTCAAAACTATC 57.601 33.333 0.00 0.00 0.00 2.08
3638 4718 6.148976 CGTAATCAGTCTCCATCCTCGTTATA 59.851 42.308 0.00 0.00 0.00 0.98
3731 4811 0.036732 TCAGGCGCTTCTTGGATGTT 59.963 50.000 7.64 0.00 0.00 2.71
3860 4952 1.191535 AATCCGAACCCTCATCGTCA 58.808 50.000 0.00 0.00 38.60 4.35
3926 5018 1.754803 CAGGAATGGCGGTCTACAGTA 59.245 52.381 0.00 0.00 0.00 2.74
3931 5023 2.391926 TATCCAGGAATGGCGGTCTA 57.608 50.000 0.00 0.00 0.00 2.59
3968 5067 4.592351 TCTTCCTCATCATCCAGAATCCTC 59.408 45.833 0.00 0.00 0.00 3.71
3972 5071 4.102838 CCAGTCTTCCTCATCATCCAGAAT 59.897 45.833 0.00 0.00 0.00 2.40
3998 5131 1.670811 GCACCCGATGTTAGTTCATGG 59.329 52.381 0.00 0.00 0.00 3.66
4019 5152 9.190858 GCATGTATGTTTCTGAGTCTCTATTAG 57.809 37.037 0.65 0.00 0.00 1.73
4032 5177 5.380043 CCCCAATCTAGCATGTATGTTTCT 58.620 41.667 0.00 0.00 0.00 2.52
4069 5214 3.624410 AGCGTTTCCGAAACAAACTAACT 59.376 39.130 21.07 6.10 41.44 2.24
4082 5227 1.205064 CAGCAGACAAGCGTTTCCG 59.795 57.895 0.00 0.00 40.15 4.30
4164 5310 1.226660 GAAACCAATGCGCCATCCG 60.227 57.895 4.18 0.00 40.75 4.18
4168 5314 0.749649 AACAAGAAACCAATGCGCCA 59.250 45.000 4.18 0.00 0.00 5.69
4193 5339 6.953101 TGTCAGCAGGAAAAGGTACATAATA 58.047 36.000 0.00 0.00 0.00 0.98
4194 5340 5.815581 TGTCAGCAGGAAAAGGTACATAAT 58.184 37.500 0.00 0.00 0.00 1.28
4212 5366 1.135199 GTTTCAGGCATGGCATGTCAG 60.135 52.381 31.49 24.57 41.32 3.51
4226 5381 3.748568 GGAGCCTCAACACTAAGTTTCAG 59.251 47.826 0.00 0.00 38.74 3.02
4233 5388 5.048846 AGAAAAAGGAGCCTCAACACTAA 57.951 39.130 0.00 0.00 0.00 2.24
4312 5495 4.094442 GGGAGAAAGAAACATTACGCGATT 59.906 41.667 15.93 0.00 0.00 3.34
4318 5501 7.393515 ACATAAGGTGGGAGAAAGAAACATTAC 59.606 37.037 0.00 0.00 0.00 1.89
4331 5514 5.538433 TCCAAAAAGAAACATAAGGTGGGAG 59.462 40.000 0.00 0.00 0.00 4.30
4334 5520 7.384932 GTGATTCCAAAAAGAAACATAAGGTGG 59.615 37.037 0.00 0.00 32.13 4.61
4356 5542 3.244665 TGCTCACAGGATTGAGTTGTGAT 60.245 43.478 6.96 0.00 46.99 3.06
4357 5543 2.104622 TGCTCACAGGATTGAGTTGTGA 59.895 45.455 6.41 6.41 46.34 3.58
4365 5551 3.805207 TCATCTGATGCTCACAGGATTG 58.195 45.455 12.78 0.00 36.22 2.67
4366 5552 4.498894 TTCATCTGATGCTCACAGGATT 57.501 40.909 12.78 0.00 36.22 3.01
4458 5645 0.307760 AAAGCACGGCAAGAAACGAG 59.692 50.000 0.00 0.00 0.00 4.18
4461 5648 0.102300 ACCAAAGCACGGCAAGAAAC 59.898 50.000 0.00 0.00 0.00 2.78
4466 5653 1.315981 TGTTGACCAAAGCACGGCAA 61.316 50.000 0.00 0.00 0.00 4.52
4569 5924 5.476945 GTCATTTGAGGTAATTGGGTGAAGT 59.523 40.000 0.00 0.00 0.00 3.01
4571 5926 4.457603 CGTCATTTGAGGTAATTGGGTGAA 59.542 41.667 0.00 0.00 0.00 3.18
4573 5928 3.128589 CCGTCATTTGAGGTAATTGGGTG 59.871 47.826 0.00 0.00 0.00 4.61
4574 5929 3.009695 TCCGTCATTTGAGGTAATTGGGT 59.990 43.478 0.00 0.00 0.00 4.51
4575 5930 3.616219 TCCGTCATTTGAGGTAATTGGG 58.384 45.455 0.00 0.00 0.00 4.12
4576 5931 4.700213 AGTTCCGTCATTTGAGGTAATTGG 59.300 41.667 0.00 0.00 0.00 3.16
4577 5932 5.880054 AGTTCCGTCATTTGAGGTAATTG 57.120 39.130 0.00 0.00 0.00 2.32
4579 5934 6.894339 AAAAGTTCCGTCATTTGAGGTAAT 57.106 33.333 0.21 0.00 0.00 1.89
4580 5935 6.544564 AGAAAAAGTTCCGTCATTTGAGGTAA 59.455 34.615 0.21 0.00 33.92 2.85
4581 5936 6.059484 AGAAAAAGTTCCGTCATTTGAGGTA 58.941 36.000 0.21 0.00 33.92 3.08
4582 5937 4.887655 AGAAAAAGTTCCGTCATTTGAGGT 59.112 37.500 0.21 0.00 33.92 3.85
4583 5938 5.438761 AGAAAAAGTTCCGTCATTTGAGG 57.561 39.130 0.00 0.00 33.92 3.86
4584 5939 5.008613 TGGAGAAAAAGTTCCGTCATTTGAG 59.991 40.000 0.00 0.00 36.22 3.02
4586 5941 5.181690 TGGAGAAAAAGTTCCGTCATTTG 57.818 39.130 0.00 0.00 36.22 2.32
4588 5943 5.845391 TTTGGAGAAAAAGTTCCGTCATT 57.155 34.783 0.00 0.00 36.22 2.57
4589 5944 5.845391 TTTTGGAGAAAAAGTTCCGTCAT 57.155 34.783 0.00 0.00 36.22 3.06
4590 5945 5.646577 TTTTTGGAGAAAAAGTTCCGTCA 57.353 34.783 0.00 0.00 38.93 4.35
4614 5973 4.873827 GGTTCGGTGAGTGCTCATTATTTA 59.126 41.667 5.11 0.00 42.18 1.40
4615 5974 3.689649 GGTTCGGTGAGTGCTCATTATTT 59.310 43.478 5.11 0.00 42.18 1.40
4616 5975 3.055094 AGGTTCGGTGAGTGCTCATTATT 60.055 43.478 5.11 0.00 42.18 1.40
4617 5976 2.501723 AGGTTCGGTGAGTGCTCATTAT 59.498 45.455 5.11 0.00 42.18 1.28
4618 5977 1.899814 AGGTTCGGTGAGTGCTCATTA 59.100 47.619 5.11 0.00 42.18 1.90
4624 5983 2.047179 GGGAGGTTCGGTGAGTGC 60.047 66.667 0.00 0.00 0.00 4.40
4694 6053 6.011481 AGGAACGGAGGGAGTAATATAAGAG 58.989 44.000 0.00 0.00 0.00 2.85
4695 6054 5.961897 AGGAACGGAGGGAGTAATATAAGA 58.038 41.667 0.00 0.00 0.00 2.10
4696 6055 7.771927 TTAGGAACGGAGGGAGTAATATAAG 57.228 40.000 0.00 0.00 0.00 1.73
4697 6056 8.731591 ATTTAGGAACGGAGGGAGTAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
4699 6058 8.912614 ATATTTAGGAACGGAGGGAGTAATAT 57.087 34.615 0.00 0.00 0.00 1.28
4700 6059 9.827198 TTATATTTAGGAACGGAGGGAGTAATA 57.173 33.333 0.00 0.00 0.00 0.98
4701 6060 8.731591 TTATATTTAGGAACGGAGGGAGTAAT 57.268 34.615 0.00 0.00 0.00 1.89
4702 6061 7.786464 ACTTATATTTAGGAACGGAGGGAGTAA 59.214 37.037 0.00 0.00 0.00 2.24
4703 6062 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
4704 6063 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
4705 6064 6.667558 ACTTATATTTAGGAACGGAGGGAG 57.332 41.667 0.00 0.00 0.00 4.30
4706 6065 7.441903 AAACTTATATTTAGGAACGGAGGGA 57.558 36.000 0.00 0.00 0.00 4.20
4707 6066 8.515695 AAAAACTTATATTTAGGAACGGAGGG 57.484 34.615 0.00 0.00 0.00 4.30
4739 6098 9.778741 TGCTTCATATTTAGTCCTTATTCGAAT 57.221 29.630 16.15 16.15 0.00 3.34
4740 6099 9.607988 TTGCTTCATATTTAGTCCTTATTCGAA 57.392 29.630 0.00 0.00 0.00 3.71
4741 6100 9.607988 TTTGCTTCATATTTAGTCCTTATTCGA 57.392 29.630 0.00 0.00 0.00 3.71
4747 6106 9.247861 ACTCAATTTGCTTCATATTTAGTCCTT 57.752 29.630 0.00 0.00 0.00 3.36
4748 6107 8.814038 ACTCAATTTGCTTCATATTTAGTCCT 57.186 30.769 0.00 0.00 0.00 3.85
4749 6108 8.677300 TGACTCAATTTGCTTCATATTTAGTCC 58.323 33.333 15.18 5.35 36.34 3.85
4756 6115 9.399797 TGTAGATTGACTCAATTTGCTTCATAT 57.600 29.630 5.73 0.00 33.90 1.78
4757 6116 8.668353 GTGTAGATTGACTCAATTTGCTTCATA 58.332 33.333 5.73 0.00 33.90 2.15
4758 6117 7.392673 AGTGTAGATTGACTCAATTTGCTTCAT 59.607 33.333 5.73 0.00 33.90 2.57
4759 6118 6.712095 AGTGTAGATTGACTCAATTTGCTTCA 59.288 34.615 5.73 1.13 33.90 3.02
4760 6119 7.118971 AGAGTGTAGATTGACTCAATTTGCTTC 59.881 37.037 5.73 6.56 41.01 3.86
4761 6120 6.939163 AGAGTGTAGATTGACTCAATTTGCTT 59.061 34.615 5.73 0.00 41.01 3.91
4762 6121 6.471146 AGAGTGTAGATTGACTCAATTTGCT 58.529 36.000 5.73 1.94 41.01 3.91
4763 6122 6.734104 AGAGTGTAGATTGACTCAATTTGC 57.266 37.500 5.73 4.82 41.01 3.68
4768 6127 8.235226 CGTAGTTTAGAGTGTAGATTGACTCAA 58.765 37.037 0.00 0.00 41.01 3.02
4769 6128 7.389884 ACGTAGTTTAGAGTGTAGATTGACTCA 59.610 37.037 0.00 0.00 37.78 3.41
4770 6129 7.750769 ACGTAGTTTAGAGTGTAGATTGACTC 58.249 38.462 0.00 0.00 37.78 3.36
4771 6130 7.684937 ACGTAGTTTAGAGTGTAGATTGACT 57.315 36.000 0.00 0.00 37.78 3.41
4788 6147 9.955102 TACAGATGGATGTATATAGACGTAGTT 57.045 33.333 0.00 0.00 36.02 2.24
4789 6148 9.955102 TTACAGATGGATGTATATAGACGTAGT 57.045 33.333 0.00 0.00 38.51 2.73
4834 6193 9.067986 CCCTCTGTTCTTAAATACAAGTCTTTT 57.932 33.333 0.00 0.00 0.00 2.27
4835 6194 8.437575 TCCCTCTGTTCTTAAATACAAGTCTTT 58.562 33.333 0.00 0.00 0.00 2.52
4836 6195 7.974504 TCCCTCTGTTCTTAAATACAAGTCTT 58.025 34.615 0.00 0.00 0.00 3.01
4837 6196 7.235812 ACTCCCTCTGTTCTTAAATACAAGTCT 59.764 37.037 0.00 0.00 0.00 3.24
4838 6197 7.387643 ACTCCCTCTGTTCTTAAATACAAGTC 58.612 38.462 0.00 0.00 0.00 3.01
4839 6198 7.317722 ACTCCCTCTGTTCTTAAATACAAGT 57.682 36.000 0.00 0.00 0.00 3.16
4840 6199 8.311836 TGTACTCCCTCTGTTCTTAAATACAAG 58.688 37.037 0.00 0.00 0.00 3.16
4841 6200 8.197592 TGTACTCCCTCTGTTCTTAAATACAA 57.802 34.615 0.00 0.00 0.00 2.41
4842 6201 7.786046 TGTACTCCCTCTGTTCTTAAATACA 57.214 36.000 0.00 0.00 0.00 2.29
4843 6202 8.475639 TCATGTACTCCCTCTGTTCTTAAATAC 58.524 37.037 0.00 0.00 0.00 1.89
4844 6203 8.603898 TCATGTACTCCCTCTGTTCTTAAATA 57.396 34.615 0.00 0.00 0.00 1.40
4845 6204 7.496346 TCATGTACTCCCTCTGTTCTTAAAT 57.504 36.000 0.00 0.00 0.00 1.40
4846 6205 6.928348 TCATGTACTCCCTCTGTTCTTAAA 57.072 37.500 0.00 0.00 0.00 1.52
4847 6206 8.059461 TCTATCATGTACTCCCTCTGTTCTTAA 58.941 37.037 0.00 0.00 0.00 1.85
4848 6207 7.583625 TCTATCATGTACTCCCTCTGTTCTTA 58.416 38.462 0.00 0.00 0.00 2.10
4849 6208 6.436027 TCTATCATGTACTCCCTCTGTTCTT 58.564 40.000 0.00 0.00 0.00 2.52
4850 6209 6.019656 TCTATCATGTACTCCCTCTGTTCT 57.980 41.667 0.00 0.00 0.00 3.01
4851 6210 6.716934 TTCTATCATGTACTCCCTCTGTTC 57.283 41.667 0.00 0.00 0.00 3.18
4852 6211 6.268847 GGATTCTATCATGTACTCCCTCTGTT 59.731 42.308 0.00 0.00 0.00 3.16
4853 6212 5.777732 GGATTCTATCATGTACTCCCTCTGT 59.222 44.000 0.00 0.00 0.00 3.41
4854 6213 5.777223 TGGATTCTATCATGTACTCCCTCTG 59.223 44.000 0.00 0.00 0.00 3.35
4855 6214 5.970289 TGGATTCTATCATGTACTCCCTCT 58.030 41.667 0.00 0.00 0.00 3.69
4856 6215 6.672266 TTGGATTCTATCATGTACTCCCTC 57.328 41.667 0.00 0.00 0.00 4.30
4857 6216 6.463049 CGTTTGGATTCTATCATGTACTCCCT 60.463 42.308 0.00 0.00 0.00 4.20
4858 6217 5.696724 CGTTTGGATTCTATCATGTACTCCC 59.303 44.000 0.00 0.00 0.00 4.30
4859 6218 6.281405 ACGTTTGGATTCTATCATGTACTCC 58.719 40.000 0.00 0.00 0.00 3.85
4860 6219 7.115095 GCTACGTTTGGATTCTATCATGTACTC 59.885 40.741 0.00 0.00 0.00 2.59
4861 6220 6.924060 GCTACGTTTGGATTCTATCATGTACT 59.076 38.462 0.00 0.00 0.00 2.73
4862 6221 6.924060 AGCTACGTTTGGATTCTATCATGTAC 59.076 38.462 0.00 0.00 0.00 2.90
4863 6222 7.050970 AGCTACGTTTGGATTCTATCATGTA 57.949 36.000 0.00 0.00 0.00 2.29
4864 6223 5.918608 AGCTACGTTTGGATTCTATCATGT 58.081 37.500 0.00 0.00 0.00 3.21
4865 6224 6.851222 AAGCTACGTTTGGATTCTATCATG 57.149 37.500 0.00 0.00 0.00 3.07
4866 6225 7.865706 AAAAGCTACGTTTGGATTCTATCAT 57.134 32.000 0.00 0.00 0.00 2.45
4867 6226 7.820386 TGTAAAAGCTACGTTTGGATTCTATCA 59.180 33.333 0.00 0.00 0.00 2.15
4868 6227 8.193250 TGTAAAAGCTACGTTTGGATTCTATC 57.807 34.615 0.00 0.00 0.00 2.08
4869 6228 8.556213 TTGTAAAAGCTACGTTTGGATTCTAT 57.444 30.769 0.00 0.00 0.00 1.98
4870 6229 7.658575 ACTTGTAAAAGCTACGTTTGGATTCTA 59.341 33.333 0.00 0.00 0.00 2.10
4871 6230 6.485648 ACTTGTAAAAGCTACGTTTGGATTCT 59.514 34.615 0.00 0.00 0.00 2.40
4872 6231 6.665465 ACTTGTAAAAGCTACGTTTGGATTC 58.335 36.000 0.00 0.00 0.00 2.52
4873 6232 6.628919 ACTTGTAAAAGCTACGTTTGGATT 57.371 33.333 0.00 0.00 0.00 3.01
4874 6233 6.435428 CAACTTGTAAAAGCTACGTTTGGAT 58.565 36.000 0.00 0.00 0.00 3.41
4875 6234 5.220892 CCAACTTGTAAAAGCTACGTTTGGA 60.221 40.000 0.00 0.00 0.00 3.53
4876 6235 4.973663 CCAACTTGTAAAAGCTACGTTTGG 59.026 41.667 0.00 0.00 0.00 3.28
4877 6236 4.439776 GCCAACTTGTAAAAGCTACGTTTG 59.560 41.667 0.00 0.00 0.00 2.93
4878 6237 4.096682 TGCCAACTTGTAAAAGCTACGTTT 59.903 37.500 0.00 0.00 0.00 3.60
4879 6238 3.628487 TGCCAACTTGTAAAAGCTACGTT 59.372 39.130 0.00 0.00 0.00 3.99
4880 6239 3.002965 GTGCCAACTTGTAAAAGCTACGT 59.997 43.478 0.00 0.00 0.00 3.57
4881 6240 3.002862 TGTGCCAACTTGTAAAAGCTACG 59.997 43.478 0.00 0.00 0.00 3.51
4882 6241 4.561735 TGTGCCAACTTGTAAAAGCTAC 57.438 40.909 0.00 0.00 0.00 3.58
4883 6242 5.105716 TGTTTGTGCCAACTTGTAAAAGCTA 60.106 36.000 0.00 0.00 0.00 3.32
4884 6243 4.180817 GTTTGTGCCAACTTGTAAAAGCT 58.819 39.130 0.00 0.00 0.00 3.74
4885 6244 3.929610 TGTTTGTGCCAACTTGTAAAAGC 59.070 39.130 0.00 0.00 0.00 3.51
4886 6245 4.926238 TGTGTTTGTGCCAACTTGTAAAAG 59.074 37.500 0.00 0.00 0.00 2.27
4887 6246 4.883083 TGTGTTTGTGCCAACTTGTAAAA 58.117 34.783 0.00 0.00 0.00 1.52
4888 6247 4.218635 TCTGTGTTTGTGCCAACTTGTAAA 59.781 37.500 0.00 0.00 0.00 2.01
4889 6248 3.759086 TCTGTGTTTGTGCCAACTTGTAA 59.241 39.130 0.00 0.00 0.00 2.41
4890 6249 3.348119 TCTGTGTTTGTGCCAACTTGTA 58.652 40.909 0.00 0.00 0.00 2.41
4891 6250 2.164219 CTCTGTGTTTGTGCCAACTTGT 59.836 45.455 0.00 0.00 0.00 3.16
4892 6251 2.801063 CTCTGTGTTTGTGCCAACTTG 58.199 47.619 0.00 0.00 0.00 3.16
4893 6252 1.134946 GCTCTGTGTTTGTGCCAACTT 59.865 47.619 0.00 0.00 0.00 2.66
4894 6253 0.740737 GCTCTGTGTTTGTGCCAACT 59.259 50.000 0.00 0.00 0.00 3.16
4895 6254 0.455410 TGCTCTGTGTTTGTGCCAAC 59.545 50.000 0.00 0.00 0.00 3.77
4896 6255 1.180907 TTGCTCTGTGTTTGTGCCAA 58.819 45.000 0.00 0.00 0.00 4.52
4897 6256 1.180907 TTTGCTCTGTGTTTGTGCCA 58.819 45.000 0.00 0.00 0.00 4.92
4898 6257 2.159254 TCTTTTGCTCTGTGTTTGTGCC 60.159 45.455 0.00 0.00 0.00 5.01
4899 6258 3.149436 TCTTTTGCTCTGTGTTTGTGC 57.851 42.857 0.00 0.00 0.00 4.57
4900 6259 4.484236 TGTTCTTTTGCTCTGTGTTTGTG 58.516 39.130 0.00 0.00 0.00 3.33
4901 6260 4.782019 TGTTCTTTTGCTCTGTGTTTGT 57.218 36.364 0.00 0.00 0.00 2.83
4902 6261 5.230726 GTGATGTTCTTTTGCTCTGTGTTTG 59.769 40.000 0.00 0.00 0.00 2.93
4903 6262 5.343249 GTGATGTTCTTTTGCTCTGTGTTT 58.657 37.500 0.00 0.00 0.00 2.83
4904 6263 4.202050 GGTGATGTTCTTTTGCTCTGTGTT 60.202 41.667 0.00 0.00 0.00 3.32
4905 6264 3.316308 GGTGATGTTCTTTTGCTCTGTGT 59.684 43.478 0.00 0.00 0.00 3.72
4906 6265 3.316029 TGGTGATGTTCTTTTGCTCTGTG 59.684 43.478 0.00 0.00 0.00 3.66
4907 6266 3.554934 TGGTGATGTTCTTTTGCTCTGT 58.445 40.909 0.00 0.00 0.00 3.41
4908 6267 4.216902 TGATGGTGATGTTCTTTTGCTCTG 59.783 41.667 0.00 0.00 0.00 3.35
4909 6268 4.401022 TGATGGTGATGTTCTTTTGCTCT 58.599 39.130 0.00 0.00 0.00 4.09
4910 6269 4.771590 TGATGGTGATGTTCTTTTGCTC 57.228 40.909 0.00 0.00 0.00 4.26
4911 6270 4.262164 GGTTGATGGTGATGTTCTTTTGCT 60.262 41.667 0.00 0.00 0.00 3.91
4912 6271 3.989817 GGTTGATGGTGATGTTCTTTTGC 59.010 43.478 0.00 0.00 0.00 3.68
4913 6272 5.199024 TGGTTGATGGTGATGTTCTTTTG 57.801 39.130 0.00 0.00 0.00 2.44
4914 6273 5.539574 TGATGGTTGATGGTGATGTTCTTTT 59.460 36.000 0.00 0.00 0.00 2.27
4915 6274 5.078949 TGATGGTTGATGGTGATGTTCTTT 58.921 37.500 0.00 0.00 0.00 2.52
4916 6275 4.665451 TGATGGTTGATGGTGATGTTCTT 58.335 39.130 0.00 0.00 0.00 2.52
4917 6276 4.305539 TGATGGTTGATGGTGATGTTCT 57.694 40.909 0.00 0.00 0.00 3.01
4918 6277 6.698008 TTATGATGGTTGATGGTGATGTTC 57.302 37.500 0.00 0.00 0.00 3.18
4919 6278 7.664552 AATTATGATGGTTGATGGTGATGTT 57.335 32.000 0.00 0.00 0.00 2.71
4920 6279 8.000709 ACTAATTATGATGGTTGATGGTGATGT 58.999 33.333 0.00 0.00 0.00 3.06
4921 6280 8.400184 ACTAATTATGATGGTTGATGGTGATG 57.600 34.615 0.00 0.00 0.00 3.07
4923 6282 9.913310 TTTACTAATTATGATGGTTGATGGTGA 57.087 29.630 0.00 0.00 0.00 4.02
4926 6285 9.965824 GGTTTTACTAATTATGATGGTTGATGG 57.034 33.333 0.00 0.00 0.00 3.51
4980 6339 9.665264 GAAGACGATGAAATTTTAGTCTTTGTT 57.335 29.630 21.25 8.92 45.39 2.83
4981 6340 8.836413 TGAAGACGATGAAATTTTAGTCTTTGT 58.164 29.630 21.25 7.66 45.39 2.83
4982 6341 9.831737 ATGAAGACGATGAAATTTTAGTCTTTG 57.168 29.630 21.25 5.33 45.39 2.77
4985 6344 8.660373 GTGATGAAGACGATGAAATTTTAGTCT 58.340 33.333 10.78 10.78 40.22 3.24
4986 6345 8.443160 TGTGATGAAGACGATGAAATTTTAGTC 58.557 33.333 0.00 0.64 0.00 2.59
4987 6346 8.230486 GTGTGATGAAGACGATGAAATTTTAGT 58.770 33.333 0.00 0.00 0.00 2.24
4988 6347 8.593057 GTGTGATGAAGACGATGAAATTTTAG 57.407 34.615 0.00 0.00 0.00 1.85
5001 6360 1.725641 TCCATGCGTGTGATGAAGAC 58.274 50.000 4.96 0.00 0.00 3.01
5002 6361 2.282407 CATCCATGCGTGTGATGAAGA 58.718 47.619 22.76 6.44 36.20 2.87
5003 6362 1.332686 CCATCCATGCGTGTGATGAAG 59.667 52.381 26.21 14.31 36.20 3.02
5004 6363 1.339920 ACCATCCATGCGTGTGATGAA 60.340 47.619 26.21 1.46 36.20 2.57
5005 6364 0.252761 ACCATCCATGCGTGTGATGA 59.747 50.000 26.21 10.76 36.20 2.92
5006 6365 1.064505 GAACCATCCATGCGTGTGATG 59.935 52.381 21.33 21.33 35.02 3.07
5007 6366 1.339920 TGAACCATCCATGCGTGTGAT 60.340 47.619 4.96 4.74 0.00 3.06
5008 6367 0.036022 TGAACCATCCATGCGTGTGA 59.964 50.000 4.96 2.39 0.00 3.58
5009 6368 0.168788 GTGAACCATCCATGCGTGTG 59.831 55.000 4.96 0.00 0.00 3.82
5010 6369 0.250684 TGTGAACCATCCATGCGTGT 60.251 50.000 4.96 0.00 0.00 4.49
5011 6370 0.448990 CTGTGAACCATCCATGCGTG 59.551 55.000 0.00 0.00 0.00 5.34
5012 6371 0.677731 CCTGTGAACCATCCATGCGT 60.678 55.000 0.00 0.00 0.00 5.24
5013 6372 1.378882 CCCTGTGAACCATCCATGCG 61.379 60.000 0.00 0.00 0.00 4.73
5014 6373 0.034186 TCCCTGTGAACCATCCATGC 60.034 55.000 0.00 0.00 0.00 4.06
5015 6374 1.004628 TGTCCCTGTGAACCATCCATG 59.995 52.381 0.00 0.00 0.00 3.66
5016 6375 1.371467 TGTCCCTGTGAACCATCCAT 58.629 50.000 0.00 0.00 0.00 3.41
5017 6376 1.144691 TTGTCCCTGTGAACCATCCA 58.855 50.000 0.00 0.00 0.00 3.41
5018 6377 2.286365 TTTGTCCCTGTGAACCATCC 57.714 50.000 0.00 0.00 0.00 3.51
5019 6378 2.296190 GGTTTTGTCCCTGTGAACCATC 59.704 50.000 0.00 0.00 39.56 3.51
5020 6379 2.316108 GGTTTTGTCCCTGTGAACCAT 58.684 47.619 0.00 0.00 39.56 3.55
5021 6380 1.006043 TGGTTTTGTCCCTGTGAACCA 59.994 47.619 2.37 2.37 45.32 3.67
5022 6381 1.770294 TGGTTTTGTCCCTGTGAACC 58.230 50.000 0.00 0.00 40.06 3.62
5023 6382 2.494073 TGTTGGTTTTGTCCCTGTGAAC 59.506 45.455 0.00 0.00 0.00 3.18
5024 6383 2.808919 TGTTGGTTTTGTCCCTGTGAA 58.191 42.857 0.00 0.00 0.00 3.18
5025 6384 2.516227 TGTTGGTTTTGTCCCTGTGA 57.484 45.000 0.00 0.00 0.00 3.58
5026 6385 2.035832 GGATGTTGGTTTTGTCCCTGTG 59.964 50.000 0.00 0.00 0.00 3.66
5027 6386 2.316108 GGATGTTGGTTTTGTCCCTGT 58.684 47.619 0.00 0.00 0.00 4.00
5028 6387 1.618343 GGGATGTTGGTTTTGTCCCTG 59.382 52.381 1.55 0.00 44.15 4.45
5029 6388 1.219213 TGGGATGTTGGTTTTGTCCCT 59.781 47.619 9.88 0.00 46.97 4.20
5031 6390 1.343142 GGTGGGATGTTGGTTTTGTCC 59.657 52.381 0.00 0.00 0.00 4.02
5032 6391 1.000717 CGGTGGGATGTTGGTTTTGTC 60.001 52.381 0.00 0.00 0.00 3.18
5033 6392 1.036707 CGGTGGGATGTTGGTTTTGT 58.963 50.000 0.00 0.00 0.00 2.83
5034 6393 0.319469 GCGGTGGGATGTTGGTTTTG 60.319 55.000 0.00 0.00 0.00 2.44
5035 6394 1.468506 GGCGGTGGGATGTTGGTTTT 61.469 55.000 0.00 0.00 0.00 2.43
5036 6395 1.906333 GGCGGTGGGATGTTGGTTT 60.906 57.895 0.00 0.00 0.00 3.27
5037 6396 2.282887 GGCGGTGGGATGTTGGTT 60.283 61.111 0.00 0.00 0.00 3.67
5038 6397 4.360405 GGGCGGTGGGATGTTGGT 62.360 66.667 0.00 0.00 0.00 3.67
5039 6398 3.583882 AAGGGCGGTGGGATGTTGG 62.584 63.158 0.00 0.00 0.00 3.77
5040 6399 2.035626 AAGGGCGGTGGGATGTTG 59.964 61.111 0.00 0.00 0.00 3.33
5041 6400 1.863155 ATGAAGGGCGGTGGGATGTT 61.863 55.000 0.00 0.00 0.00 2.71
5042 6401 1.863155 AATGAAGGGCGGTGGGATGT 61.863 55.000 0.00 0.00 0.00 3.06
5043 6402 1.076777 AATGAAGGGCGGTGGGATG 60.077 57.895 0.00 0.00 0.00 3.51
5044 6403 1.076777 CAATGAAGGGCGGTGGGAT 60.077 57.895 0.00 0.00 0.00 3.85
5045 6404 2.354729 CAATGAAGGGCGGTGGGA 59.645 61.111 0.00 0.00 0.00 4.37
5046 6405 3.451894 GCAATGAAGGGCGGTGGG 61.452 66.667 0.00 0.00 0.00 4.61
5047 6406 2.361610 AGCAATGAAGGGCGGTGG 60.362 61.111 0.00 0.00 34.54 4.61
5048 6407 2.409870 GGAGCAATGAAGGGCGGTG 61.410 63.158 0.00 0.00 34.54 4.94
5049 6408 2.044946 GGAGCAATGAAGGGCGGT 60.045 61.111 0.00 0.00 34.54 5.68
5050 6409 2.045045 TGGAGCAATGAAGGGCGG 60.045 61.111 0.00 0.00 34.54 6.13
5051 6410 2.768492 GCTGGAGCAATGAAGGGCG 61.768 63.158 0.00 0.00 41.59 6.13
5052 6411 3.204418 GCTGGAGCAATGAAGGGC 58.796 61.111 0.00 0.00 41.59 5.19
5062 6421 6.669125 ATCCTCTATGATATATGCTGGAGC 57.331 41.667 0.00 0.00 42.50 4.70
5073 6432 9.439461 CCAAGACCCATATTATCCTCTATGATA 57.561 37.037 0.00 0.00 0.00 2.15
5074 6433 7.147408 GCCAAGACCCATATTATCCTCTATGAT 60.147 40.741 0.00 0.00 0.00 2.45
5075 6434 6.156949 GCCAAGACCCATATTATCCTCTATGA 59.843 42.308 0.00 0.00 0.00 2.15
5076 6435 6.070021 TGCCAAGACCCATATTATCCTCTATG 60.070 42.308 0.00 0.00 0.00 2.23
5077 6436 6.032039 TGCCAAGACCCATATTATCCTCTAT 58.968 40.000 0.00 0.00 0.00 1.98
5078 6437 5.411493 TGCCAAGACCCATATTATCCTCTA 58.589 41.667 0.00 0.00 0.00 2.43
5079 6438 4.242811 TGCCAAGACCCATATTATCCTCT 58.757 43.478 0.00 0.00 0.00 3.69
5080 6439 4.640771 TGCCAAGACCCATATTATCCTC 57.359 45.455 0.00 0.00 0.00 3.71
5081 6440 5.605540 AATGCCAAGACCCATATTATCCT 57.394 39.130 0.00 0.00 0.00 3.24
5082 6441 6.012745 AGAAATGCCAAGACCCATATTATCC 58.987 40.000 0.00 0.00 0.00 2.59
5083 6442 8.635765 TTAGAAATGCCAAGACCCATATTATC 57.364 34.615 0.00 0.00 0.00 1.75
5084 6443 9.247861 GATTAGAAATGCCAAGACCCATATTAT 57.752 33.333 0.00 0.00 0.00 1.28
5085 6444 7.669722 GGATTAGAAATGCCAAGACCCATATTA 59.330 37.037 0.00 0.00 0.00 0.98
5086 6445 6.494835 GGATTAGAAATGCCAAGACCCATATT 59.505 38.462 0.00 0.00 0.00 1.28
5087 6446 6.012745 GGATTAGAAATGCCAAGACCCATAT 58.987 40.000 0.00 0.00 0.00 1.78
5088 6447 5.385198 GGATTAGAAATGCCAAGACCCATA 58.615 41.667 0.00 0.00 0.00 2.74
5089 6448 4.218312 GGATTAGAAATGCCAAGACCCAT 58.782 43.478 0.00 0.00 0.00 4.00
5090 6449 3.627237 GGGATTAGAAATGCCAAGACCCA 60.627 47.826 5.41 0.00 34.43 4.51
5091 6450 2.959030 GGGATTAGAAATGCCAAGACCC 59.041 50.000 5.41 0.00 0.00 4.46
5092 6451 3.631250 TGGGATTAGAAATGCCAAGACC 58.369 45.455 10.07 0.00 36.56 3.85
5093 6452 3.067320 GCTGGGATTAGAAATGCCAAGAC 59.933 47.826 13.00 3.84 39.05 3.01
5094 6453 3.290710 GCTGGGATTAGAAATGCCAAGA 58.709 45.455 13.00 0.00 39.05 3.02
5095 6454 3.025978 TGCTGGGATTAGAAATGCCAAG 58.974 45.455 13.00 8.92 39.05 3.61
5096 6455 3.025978 CTGCTGGGATTAGAAATGCCAA 58.974 45.455 13.00 0.50 39.05 4.52
5097 6456 2.241941 TCTGCTGGGATTAGAAATGCCA 59.758 45.455 11.69 11.69 37.18 4.92
5098 6457 2.936202 TCTGCTGGGATTAGAAATGCC 58.064 47.619 3.44 3.44 0.00 4.40
5099 6458 5.312079 AGTATCTGCTGGGATTAGAAATGC 58.688 41.667 0.00 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.