Multiple sequence alignment - TraesCS5A01G340900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G340900 chr5A 100.000 3130 0 0 852 3981 547332511 547329382 0.000000e+00 5781.0
1 TraesCS5A01G340900 chr5A 100.000 588 0 0 1 588 547333362 547332775 0.000000e+00 1086.0
2 TraesCS5A01G340900 chr5B 92.443 2726 135 35 941 3635 523213392 523216077 0.000000e+00 3827.0
3 TraesCS5A01G340900 chr5B 79.938 643 56 35 3 588 523212112 523212738 4.790000e-109 405.0
4 TraesCS5A01G340900 chr5B 79.705 271 36 11 26 283 523210824 523211088 1.140000e-40 178.0
5 TraesCS5A01G340900 chr5D 91.931 2739 114 50 930 3635 432514702 432512038 0.000000e+00 3735.0
6 TraesCS5A01G340900 chr5D 94.643 112 5 1 3871 3981 290814605 290814716 5.290000e-39 172.0
7 TraesCS5A01G340900 chr5D 97.059 34 1 0 3721 3754 480983704 480983737 1.550000e-04 58.4
8 TraesCS5A01G340900 chr2A 83.871 372 28 9 3165 3528 746066169 746066516 3.840000e-85 326.0
9 TraesCS5A01G340900 chr2B 82.282 333 23 15 3307 3635 53599733 53600033 5.110000e-64 255.0
10 TraesCS5A01G340900 chr7B 86.449 214 22 2 3652 3858 612607502 612607715 1.110000e-55 228.0
11 TraesCS5A01G340900 chr7B 97.059 34 1 0 3721 3754 330567172 330567205 1.550000e-04 58.4
12 TraesCS5A01G340900 chr3B 92.126 127 9 1 985 1111 625336938 625336813 1.140000e-40 178.0
13 TraesCS5A01G340900 chr1D 92.683 123 9 0 989 1111 377973954 377974076 1.140000e-40 178.0
14 TraesCS5A01G340900 chr1D 87.500 128 16 0 982 1109 297538632 297538505 8.910000e-32 148.0
15 TraesCS5A01G340900 chr6D 98.020 101 2 0 3881 3981 28048652 28048752 4.090000e-40 176.0
16 TraesCS5A01G340900 chr6D 98.020 101 2 0 3881 3981 251231942 251231842 4.090000e-40 176.0
17 TraesCS5A01G340900 chr6D 92.126 127 4 4 3857 3981 294088236 294088358 1.470000e-39 174.0
18 TraesCS5A01G340900 chr6D 94.643 112 5 1 3871 3981 179949733 179949622 5.290000e-39 172.0
19 TraesCS5A01G340900 chr4D 98.039 102 1 1 3881 3981 161262265 161262366 4.090000e-40 176.0
20 TraesCS5A01G340900 chr4D 98.020 101 2 0 3881 3981 172516048 172515948 4.090000e-40 176.0
21 TraesCS5A01G340900 chr4D 98.020 101 2 0 3881 3981 358481164 358481264 4.090000e-40 176.0
22 TraesCS5A01G340900 chr4D 94.595 37 2 0 3721 3757 380528275 380528239 1.550000e-04 58.4
23 TraesCS5A01G340900 chr6A 94.643 112 5 1 3871 3981 235919557 235919446 5.290000e-39 172.0
24 TraesCS5A01G340900 chr1A 91.870 123 10 0 989 1111 478567440 478567562 5.290000e-39 172.0
25 TraesCS5A01G340900 chr1A 86.957 138 17 1 982 1119 370110240 370110104 1.920000e-33 154.0
26 TraesCS5A01G340900 chr1A 94.595 37 2 0 3721 3757 380559414 380559378 1.550000e-04 58.4
27 TraesCS5A01G340900 chr3D 90.551 127 11 1 986 1111 470894841 470894715 2.460000e-37 167.0
28 TraesCS5A01G340900 chr1B 91.057 123 11 0 989 1111 505626343 505626465 2.460000e-37 167.0
29 TraesCS5A01G340900 chr1B 94.595 37 2 0 3721 3757 121243973 121243937 1.550000e-04 58.4
30 TraesCS5A01G340900 chr7D 94.872 39 1 1 3721 3759 9033821 9033858 4.300000e-05 60.2
31 TraesCS5A01G340900 chr2D 97.143 35 1 0 3720 3754 27553168 27553202 4.300000e-05 60.2
32 TraesCS5A01G340900 chr2D 97.059 34 1 0 3721 3754 400494496 400494529 1.550000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G340900 chr5A 547329382 547333362 3980 True 3433.5 5781 100.000000 1 3981 2 chr5A.!!$R1 3980
1 TraesCS5A01G340900 chr5B 523210824 523216077 5253 False 1470.0 3827 84.028667 3 3635 3 chr5B.!!$F1 3632
2 TraesCS5A01G340900 chr5D 432512038 432514702 2664 True 3735.0 3735 91.931000 930 3635 1 chr5D.!!$R1 2705

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
90 1380 0.031585 GAAAACCGCCGCTCCTTTTT 59.968 50.0 0.0 0.0 0.00 1.94 F
891 2233 0.032714 ACCTCTCCGGTAAGTACCCC 60.033 60.0 0.0 0.0 46.73 4.95 F
1185 3096 0.098728 AAATACGTGCTGAATGCCGC 59.901 50.0 0.0 0.0 42.00 6.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1489 3400 0.877071 TGTCGACGTACCAGAAGTCC 59.123 55.000 11.62 0.0 33.38 3.85 R
2743 4663 0.249280 CGTATGGCGTGTGCTGGATA 60.249 55.000 0.00 0.0 42.25 2.59 R
3036 4959 1.267261 CCGACCGGATCAGTATCTGTC 59.733 57.143 9.46 0.0 36.85 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 1315 0.327000 CCTGGTCTCCCTCCATTCCT 60.327 60.000 0.00 0.00 34.26 3.36
32 1319 1.419381 GTCTCCCTCCATTCCTCCTC 58.581 60.000 0.00 0.00 0.00 3.71
33 1320 0.105964 TCTCCCTCCATTCCTCCTCG 60.106 60.000 0.00 0.00 0.00 4.63
41 1331 1.068588 CCATTCCTCCTCGCGTCAATA 59.931 52.381 5.77 0.00 0.00 1.90
56 1346 5.031578 GCGTCAATATGGCAATTTCGTTTA 58.968 37.500 0.00 0.00 0.00 2.01
72 1362 1.134729 GTTTACATAGGTTCCCGCCGA 60.135 52.381 0.00 0.00 0.00 5.54
73 1363 1.193323 TTACATAGGTTCCCGCCGAA 58.807 50.000 0.00 0.00 0.00 4.30
74 1364 1.193323 TACATAGGTTCCCGCCGAAA 58.807 50.000 0.00 0.00 30.39 3.46
75 1365 0.325602 ACATAGGTTCCCGCCGAAAA 59.674 50.000 0.00 0.00 30.39 2.29
76 1366 0.730840 CATAGGTTCCCGCCGAAAAC 59.269 55.000 0.00 0.00 30.39 2.43
77 1367 0.393402 ATAGGTTCCCGCCGAAAACC 60.393 55.000 11.24 11.24 42.27 3.27
78 1368 2.784889 TAGGTTCCCGCCGAAAACCG 62.785 60.000 12.76 0.00 45.70 4.44
79 1369 4.394078 GTTCCCGCCGAAAACCGC 62.394 66.667 0.00 0.00 36.84 5.68
90 1380 0.031585 GAAAACCGCCGCTCCTTTTT 59.968 50.000 0.00 0.00 0.00 1.94
129 1433 2.145536 GACGCCGGGTTTCTAGAAAAA 58.854 47.619 19.30 0.00 31.33 1.94
135 1439 3.215975 CGGGTTTCTAGAAAAACACCCA 58.784 45.455 29.89 4.86 38.97 4.51
138 1442 4.277672 GGGTTTCTAGAAAAACACCCACTC 59.722 45.833 27.67 10.10 40.22 3.51
146 1450 4.962362 AGAAAAACACCCACTCTCCATTTT 59.038 37.500 0.00 0.00 0.00 1.82
154 1458 1.808945 CACTCTCCATTTTGCGCTTCT 59.191 47.619 9.73 0.00 0.00 2.85
167 1471 3.132925 TGCGCTTCTACGTTAAGGTTTT 58.867 40.909 9.73 0.00 34.88 2.43
174 1478 6.017687 GCTTCTACGTTAAGGTTTTCCAAAGA 60.018 38.462 6.07 0.00 43.73 2.52
176 1480 7.486802 TCTACGTTAAGGTTTTCCAAAGAAG 57.513 36.000 6.07 0.00 43.73 2.85
179 1483 5.105675 ACGTTAAGGTTTTCCAAAGAAGCAA 60.106 36.000 0.00 0.00 43.73 3.91
185 1489 5.523552 AGGTTTTCCAAAGAAGCAAAATTCG 59.476 36.000 0.00 0.00 43.73 3.34
193 1497 6.528072 CCAAAGAAGCAAAATTCGATTCCTAC 59.472 38.462 3.05 0.00 34.27 3.18
203 1507 0.178998 CGATTCCTACCCCTCTCCGA 60.179 60.000 0.00 0.00 0.00 4.55
205 1509 0.935194 ATTCCTACCCCTCTCCGACT 59.065 55.000 0.00 0.00 0.00 4.18
208 1512 1.038130 CCTACCCCTCTCCGACTGTG 61.038 65.000 0.00 0.00 0.00 3.66
211 1515 2.575993 CCCTCTCCGACTGTGCTG 59.424 66.667 0.00 0.00 0.00 4.41
232 1537 3.243805 TGACACCATCAGCACAAAAATGG 60.244 43.478 0.00 0.00 43.52 3.16
243 1548 7.370383 TCAGCACAAAAATGGAAGAAATCTAC 58.630 34.615 0.00 0.00 0.00 2.59
244 1549 6.306356 CAGCACAAAAATGGAAGAAATCTACG 59.694 38.462 0.00 0.00 0.00 3.51
255 1560 5.163784 GGAAGAAATCTACGGGTTTTGCTAC 60.164 44.000 0.00 0.00 0.00 3.58
304 1609 2.171027 ACCACTTCCAACTCACCGTTAA 59.829 45.455 0.00 0.00 33.63 2.01
306 1611 3.002965 CCACTTCCAACTCACCGTTAAAC 59.997 47.826 0.00 0.00 33.63 2.01
356 1664 4.514816 CCATTCATGATTGGTATACACGCA 59.485 41.667 23.04 0.00 0.00 5.24
359 1667 5.671742 TCATGATTGGTATACACGCATTG 57.328 39.130 5.01 0.00 0.00 2.82
363 1671 6.597262 TGATTGGTATACACGCATTGTAAG 57.403 37.500 5.01 0.00 44.11 2.34
369 1677 6.874664 TGGTATACACGCATTGTAAGAAAGAA 59.125 34.615 5.01 0.00 44.11 2.52
370 1678 7.064134 TGGTATACACGCATTGTAAGAAAGAAG 59.936 37.037 5.01 0.00 44.11 2.85
371 1679 7.277098 GGTATACACGCATTGTAAGAAAGAAGA 59.723 37.037 5.01 0.00 44.11 2.87
381 1689 7.497925 TTGTAAGAAAGAAGAAGAAAGCCTC 57.502 36.000 0.00 0.00 0.00 4.70
412 1720 7.387673 CGAGGCTATCAATGTGAACCATATTTA 59.612 37.037 0.00 0.00 31.97 1.40
418 1739 7.389803 TCAATGTGAACCATATTTACCTGTG 57.610 36.000 0.00 0.00 31.97 3.66
421 1742 4.013728 GTGAACCATATTTACCTGTGGCA 58.986 43.478 0.00 0.00 35.11 4.92
441 1762 4.133078 GCAATCTCCTCATCCGAAATCTT 58.867 43.478 0.00 0.00 0.00 2.40
442 1763 5.300752 GCAATCTCCTCATCCGAAATCTTA 58.699 41.667 0.00 0.00 0.00 2.10
445 1766 7.040823 GCAATCTCCTCATCCGAAATCTTATTT 60.041 37.037 0.00 0.00 0.00 1.40
446 1767 9.494271 CAATCTCCTCATCCGAAATCTTATTTA 57.506 33.333 0.00 0.00 0.00 1.40
447 1768 9.495572 AATCTCCTCATCCGAAATCTTATTTAC 57.504 33.333 0.00 0.00 0.00 2.01
449 1770 8.482943 TCTCCTCATCCGAAATCTTATTTACAA 58.517 33.333 0.00 0.00 0.00 2.41
450 1771 8.662781 TCCTCATCCGAAATCTTATTTACAAG 57.337 34.615 0.00 0.00 0.00 3.16
460 1784 9.704098 GAAATCTTATTTACAAGCTTCCGTTAG 57.296 33.333 0.00 0.00 0.00 2.34
476 1800 2.279921 CGTTAGCATCATCGTCACACAG 59.720 50.000 0.00 0.00 0.00 3.66
477 1801 1.926561 TAGCATCATCGTCACACAGC 58.073 50.000 0.00 0.00 0.00 4.40
479 1803 0.095935 GCATCATCGTCACACAGCAC 59.904 55.000 0.00 0.00 0.00 4.40
506 1832 1.120530 CCGGTCCAGGCTATACAGTT 58.879 55.000 0.00 0.00 0.00 3.16
507 1833 1.202533 CCGGTCCAGGCTATACAGTTG 60.203 57.143 0.00 0.00 0.00 3.16
508 1834 1.806623 CGGTCCAGGCTATACAGTTGC 60.807 57.143 0.00 0.00 0.00 4.17
509 1835 1.571919 GTCCAGGCTATACAGTTGCG 58.428 55.000 0.00 0.00 0.00 4.85
510 1836 0.179084 TCCAGGCTATACAGTTGCGC 60.179 55.000 0.00 0.00 0.00 6.09
511 1837 1.490693 CCAGGCTATACAGTTGCGCG 61.491 60.000 0.00 0.00 0.00 6.86
512 1838 0.806102 CAGGCTATACAGTTGCGCGT 60.806 55.000 8.43 0.00 0.00 6.01
513 1839 0.742505 AGGCTATACAGTTGCGCGTA 59.257 50.000 8.43 0.00 0.00 4.42
514 1840 1.129326 GGCTATACAGTTGCGCGTAG 58.871 55.000 8.43 0.00 0.00 3.51
535 1863 7.093992 CGTAGAAAAGATCTGAAAAGAGGAGT 58.906 38.462 0.00 0.00 39.30 3.85
536 1864 7.274686 CGTAGAAAAGATCTGAAAAGAGGAGTC 59.725 40.741 0.00 0.00 39.30 3.36
538 1866 4.464069 AAGATCTGAAAAGAGGAGTCGG 57.536 45.455 0.00 0.00 0.00 4.79
539 1867 2.167487 AGATCTGAAAAGAGGAGTCGGC 59.833 50.000 0.00 0.00 0.00 5.54
540 1868 0.243907 TCTGAAAAGAGGAGTCGGCG 59.756 55.000 0.00 0.00 0.00 6.46
542 1870 1.292541 GAAAAGAGGAGTCGGCGGT 59.707 57.895 7.21 0.00 0.00 5.68
543 1871 0.529378 GAAAAGAGGAGTCGGCGGTA 59.471 55.000 7.21 0.00 0.00 4.02
544 1872 0.245813 AAAAGAGGAGTCGGCGGTAC 59.754 55.000 7.21 0.00 0.00 3.34
549 1886 2.799371 GAGTCGGCGGTACTCCTG 59.201 66.667 15.58 0.00 37.91 3.86
890 2232 3.604024 ACCTCTCCGGTAAGTACCC 57.396 57.895 0.00 0.00 46.73 3.69
891 2233 0.032714 ACCTCTCCGGTAAGTACCCC 60.033 60.000 0.00 0.00 46.73 4.95
892 2234 1.105759 CCTCTCCGGTAAGTACCCCG 61.106 65.000 0.00 8.77 43.51 5.73
897 2239 2.586245 GGTAAGTACCCCGCCCAC 59.414 66.667 0.00 0.00 40.53 4.61
900 2242 3.256941 TAAGTACCCCGCCCACCCT 62.257 63.158 0.00 0.00 0.00 4.34
901 2243 2.769145 TAAGTACCCCGCCCACCCTT 62.769 60.000 0.00 0.00 0.00 3.95
903 2245 3.653078 TACCCCGCCCACCCTTTG 61.653 66.667 0.00 0.00 0.00 2.77
906 2248 4.994756 CCCGCCCACCCTTTGCTT 62.995 66.667 0.00 0.00 0.00 3.91
907 2249 2.034999 CCGCCCACCCTTTGCTTA 59.965 61.111 0.00 0.00 0.00 3.09
908 2250 2.046285 CCGCCCACCCTTTGCTTAG 61.046 63.158 0.00 0.00 0.00 2.18
909 2251 1.002624 CGCCCACCCTTTGCTTAGA 60.003 57.895 0.00 0.00 0.00 2.10
910 2252 0.394352 CGCCCACCCTTTGCTTAGAT 60.394 55.000 0.00 0.00 0.00 1.98
912 2254 1.064389 GCCCACCCTTTGCTTAGATCT 60.064 52.381 0.00 0.00 0.00 2.75
913 2255 2.621668 GCCCACCCTTTGCTTAGATCTT 60.622 50.000 0.00 0.00 0.00 2.40
915 2257 4.200092 CCCACCCTTTGCTTAGATCTTAC 58.800 47.826 0.00 0.00 0.00 2.34
916 2258 4.080299 CCCACCCTTTGCTTAGATCTTACT 60.080 45.833 0.00 0.00 0.00 2.24
928 2831 0.824759 ATCTTACTCCACTCCGCACC 59.175 55.000 0.00 0.00 0.00 5.01
934 2837 2.227089 CTCCACTCCGCACCAGTACC 62.227 65.000 0.00 0.00 0.00 3.34
944 2847 1.670083 ACCAGTACCGGCGCTTTTC 60.670 57.895 7.64 0.00 0.00 2.29
946 2849 1.635663 CCAGTACCGGCGCTTTTCTG 61.636 60.000 7.64 9.92 0.00 3.02
963 2874 0.390472 CTGTTTCTGACGGGAGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
964 2875 0.832135 TGTTTCTGACGGGAGAGCCT 60.832 55.000 0.00 0.00 0.00 4.58
965 2876 0.321996 GTTTCTGACGGGAGAGCCTT 59.678 55.000 0.00 0.00 0.00 4.35
966 2877 0.608640 TTTCTGACGGGAGAGCCTTC 59.391 55.000 0.00 0.00 0.00 3.46
985 2896 3.235292 TTTTCTGCTGCGTTCGCCG 62.235 57.895 14.44 9.34 40.40 6.46
1162 3073 1.376609 ATTCCCGTGATTTCTGCCGC 61.377 55.000 0.00 0.00 0.00 6.53
1163 3074 2.436646 CCCGTGATTTCTGCCGCT 60.437 61.111 0.00 0.00 0.00 5.52
1182 3093 2.848302 GCTGAAAATACGTGCTGAATGC 59.152 45.455 0.00 0.00 43.25 3.56
1183 3094 3.429085 CTGAAAATACGTGCTGAATGCC 58.571 45.455 0.00 0.00 42.00 4.40
1184 3095 2.159585 TGAAAATACGTGCTGAATGCCG 60.160 45.455 0.00 0.00 42.00 5.69
1185 3096 0.098728 AAATACGTGCTGAATGCCGC 59.901 50.000 0.00 0.00 42.00 6.53
1186 3097 2.035617 AATACGTGCTGAATGCCGCG 62.036 55.000 0.00 0.00 42.00 6.46
1189 3100 2.255252 GTGCTGAATGCCGCGTTT 59.745 55.556 4.92 0.00 42.00 3.60
1190 3101 2.082366 GTGCTGAATGCCGCGTTTG 61.082 57.895 4.92 0.00 42.00 2.93
1191 3102 2.255252 GCTGAATGCCGCGTTTGT 59.745 55.556 4.92 0.00 35.15 2.83
1193 3104 0.939106 GCTGAATGCCGCGTTTGTTT 60.939 50.000 4.92 0.00 35.15 2.83
1196 3107 1.204792 GAATGCCGCGTTTGTTTTGT 58.795 45.000 4.92 0.00 0.00 2.83
1489 3400 0.516001 TCGACGAGTTCAAGGAGACG 59.484 55.000 0.00 0.00 0.00 4.18
1705 3616 1.332997 GCCAATCAGATTCTGAAGGCG 59.667 52.381 31.02 17.46 46.98 5.52
1788 3699 3.977427 CCTTGCCAAAGGTAAACACTTC 58.023 45.455 0.00 0.00 46.97 3.01
1789 3700 3.383185 CCTTGCCAAAGGTAAACACTTCA 59.617 43.478 0.00 0.00 46.97 3.02
1831 3742 5.472820 GTGGTACTACTAACTGTCACTGAGT 59.527 44.000 1.48 0.00 0.00 3.41
1841 3752 3.069289 CTGTCACTGAGTTGCTATGCAA 58.931 45.455 0.45 0.45 46.80 4.08
1856 3767 5.183713 TGCTATGCAAACTTAAGTTGCTGAT 59.816 36.000 27.56 20.75 38.44 2.90
1916 3827 9.082313 GGGTCATGGATATTTCTATCAATTGTT 57.918 33.333 5.13 0.00 36.27 2.83
1917 3828 9.903682 GGTCATGGATATTTCTATCAATTGTTG 57.096 33.333 5.13 0.00 36.27 3.33
1921 3832 8.153479 TGGATATTTCTATCAATTGTTGGTCG 57.847 34.615 5.13 0.00 36.27 4.79
1926 3837 5.966636 TCTATCAATTGTTGGTCGAATCG 57.033 39.130 5.13 0.00 0.00 3.34
1931 3842 1.309950 TTGTTGGTCGAATCGCCAAA 58.690 45.000 24.74 15.86 41.56 3.28
1932 3843 1.309950 TGTTGGTCGAATCGCCAAAA 58.690 45.000 24.74 19.78 41.56 2.44
1933 3844 1.676529 TGTTGGTCGAATCGCCAAAAA 59.323 42.857 24.74 16.79 41.56 1.94
2231 4142 3.056107 TGAAGGGTCTTGTTGGAGATACG 60.056 47.826 0.00 0.00 0.00 3.06
2297 4208 0.392461 TAAGATTGCGACACCCTGGC 60.392 55.000 0.00 0.00 0.00 4.85
2362 4273 5.068591 ACAAGGTTAACAATTCTTCACACCC 59.931 40.000 8.10 0.00 0.00 4.61
2407 4318 4.387862 CCTTGAAAGTGATTGCTTGCATTC 59.612 41.667 9.68 9.68 34.28 2.67
2469 4386 7.283127 TGGAGCTTACAATTATCATCAGAAACC 59.717 37.037 0.00 0.00 0.00 3.27
2587 4507 4.684484 ACTTGAAAGTTACTCGAGGGTT 57.316 40.909 18.41 2.75 35.21 4.11
2623 4543 3.609175 CGTTCAACACAATTGCGAGGATT 60.609 43.478 5.05 0.00 0.00 3.01
2743 4663 0.253347 TCTCCCCAAGCCCATTCTCT 60.253 55.000 0.00 0.00 0.00 3.10
2884 4807 1.393883 GCGAAACCCGAGATCAAAGTC 59.606 52.381 0.00 0.00 41.76 3.01
2992 4915 0.310854 GGGACTGAGTTTTTGGCGTG 59.689 55.000 0.00 0.00 0.00 5.34
2993 4916 0.317854 GGACTGAGTTTTTGGCGTGC 60.318 55.000 0.00 0.00 0.00 5.34
2995 4918 2.010817 CTGAGTTTTTGGCGTGCGC 61.011 57.895 8.17 8.17 41.06 6.09
3036 4959 6.045318 ACAGACAGGTATCAATCTTCATTCG 58.955 40.000 0.00 0.00 0.00 3.34
3145 5071 1.202557 TCCGCAGACCGTGTACTTTTT 60.203 47.619 0.00 0.00 34.38 1.94
3168 5094 1.333636 CCCTCCCTGCTCACCTAGTG 61.334 65.000 0.00 0.00 34.45 2.74
3192 5118 5.152623 TGGAGTAAGTGAACTCTTGATGG 57.847 43.478 4.20 0.00 44.42 3.51
3206 5141 3.764434 TCTTGATGGCGTCTAGTTTCTCT 59.236 43.478 15.98 0.00 32.43 3.10
3225 5160 2.034685 TCTGTCAGTCAGCTGTGTGTAC 59.965 50.000 14.67 3.79 43.32 2.90
3226 5161 1.068588 TGTCAGTCAGCTGTGTGTACC 59.931 52.381 14.67 6.05 43.05 3.34
3290 5233 2.666190 GCAGCAGCCGAGTGAACA 60.666 61.111 0.00 0.00 33.58 3.18
3297 5240 1.931841 CAGCCGAGTGAACATGAGATG 59.068 52.381 0.00 0.00 0.00 2.90
3299 5242 1.662629 GCCGAGTGAACATGAGATGTG 59.337 52.381 0.00 0.00 44.07 3.21
3349 5295 1.153289 CCTGATCCTGAAGCCACCG 60.153 63.158 0.00 0.00 0.00 4.94
3422 5370 3.803082 CGGTGGCCGTGCATTCTG 61.803 66.667 0.00 0.00 42.73 3.02
3487 5436 6.451064 TGATCTGACGCTAGTTTCTTCATA 57.549 37.500 0.00 0.00 0.00 2.15
3514 5465 7.820872 TCTTTGCCTACTGGTACTGTTATTAAC 59.179 37.037 0.00 0.00 41.74 2.01
3573 5524 3.193263 CGGTCACTTCATTCATCTCTGG 58.807 50.000 0.00 0.00 0.00 3.86
3584 5535 3.717400 TCATCTCTGGAATGAGTACGC 57.283 47.619 0.00 0.00 35.68 4.42
3585 5536 3.023832 TCATCTCTGGAATGAGTACGCA 58.976 45.455 0.51 0.51 35.68 5.24
3595 5546 0.313987 TGAGTACGCAGTGACAGTGG 59.686 55.000 12.19 5.04 45.73 4.00
3612 5563 1.236616 TGGCACTGCTCGTTCATTGG 61.237 55.000 0.00 0.00 0.00 3.16
3622 5573 0.869068 CGTTCATTGGTGCCGTTGTA 59.131 50.000 0.00 0.00 0.00 2.41
3631 5582 1.991965 GGTGCCGTTGTATGCAAATTG 59.008 47.619 0.00 0.00 39.57 2.32
3635 5586 3.063485 GCCGTTGTATGCAAATTGGTTT 58.937 40.909 0.00 0.00 36.22 3.27
3636 5587 3.120718 GCCGTTGTATGCAAATTGGTTTG 60.121 43.478 0.00 0.00 45.92 2.93
3637 5588 3.431572 CCGTTGTATGCAAATTGGTTTGG 59.568 43.478 0.00 0.00 43.88 3.28
3638 5589 4.054671 CGTTGTATGCAAATTGGTTTGGT 58.945 39.130 0.00 0.00 43.88 3.67
3639 5590 4.509600 CGTTGTATGCAAATTGGTTTGGTT 59.490 37.500 0.00 0.00 43.88 3.67
3640 5591 5.692204 CGTTGTATGCAAATTGGTTTGGTTA 59.308 36.000 0.00 0.00 43.88 2.85
3641 5592 6.346199 CGTTGTATGCAAATTGGTTTGGTTAC 60.346 38.462 0.00 0.00 43.88 2.50
3642 5593 6.161855 TGTATGCAAATTGGTTTGGTTACA 57.838 33.333 0.00 0.00 43.88 2.41
3643 5594 6.219473 TGTATGCAAATTGGTTTGGTTACAG 58.781 36.000 0.00 0.00 43.88 2.74
3644 5595 4.744795 TGCAAATTGGTTTGGTTACAGT 57.255 36.364 0.00 0.00 43.88 3.55
3645 5596 5.091261 TGCAAATTGGTTTGGTTACAGTT 57.909 34.783 0.00 0.00 43.88 3.16
3646 5597 6.222038 TGCAAATTGGTTTGGTTACAGTTA 57.778 33.333 0.00 0.00 43.88 2.24
3647 5598 6.821388 TGCAAATTGGTTTGGTTACAGTTAT 58.179 32.000 0.00 0.00 43.88 1.89
3648 5599 7.275920 TGCAAATTGGTTTGGTTACAGTTATT 58.724 30.769 0.00 0.00 43.88 1.40
3649 5600 7.225538 TGCAAATTGGTTTGGTTACAGTTATTG 59.774 33.333 0.00 0.00 43.88 1.90
3650 5601 7.225734 GCAAATTGGTTTGGTTACAGTTATTGT 59.774 33.333 0.00 0.00 43.88 2.71
3651 5602 8.547069 CAAATTGGTTTGGTTACAGTTATTGTG 58.453 33.333 0.00 0.00 39.69 3.33
3652 5603 5.776173 TGGTTTGGTTACAGTTATTGTGG 57.224 39.130 0.00 0.00 41.10 4.17
3653 5604 4.585162 TGGTTTGGTTACAGTTATTGTGGG 59.415 41.667 0.00 0.00 41.10 4.61
3654 5605 4.552355 GTTTGGTTACAGTTATTGTGGGC 58.448 43.478 0.00 0.00 41.10 5.36
3655 5606 2.428491 TGGTTACAGTTATTGTGGGCG 58.572 47.619 0.00 0.00 41.10 6.13
3656 5607 1.131693 GGTTACAGTTATTGTGGGCGC 59.868 52.381 0.00 0.00 41.10 6.53
3657 5608 1.080298 TTACAGTTATTGTGGGCGCG 58.920 50.000 0.00 0.00 41.10 6.86
3658 5609 0.037139 TACAGTTATTGTGGGCGCGT 60.037 50.000 8.43 0.00 41.10 6.01
3659 5610 0.887387 ACAGTTATTGTGGGCGCGTT 60.887 50.000 8.43 0.00 38.99 4.84
3660 5611 0.239879 CAGTTATTGTGGGCGCGTTT 59.760 50.000 8.43 0.00 0.00 3.60
3661 5612 0.239879 AGTTATTGTGGGCGCGTTTG 59.760 50.000 8.43 0.00 0.00 2.93
3662 5613 0.731174 GTTATTGTGGGCGCGTTTGG 60.731 55.000 8.43 0.00 0.00 3.28
3663 5614 1.173444 TTATTGTGGGCGCGTTTGGT 61.173 50.000 8.43 0.00 0.00 3.67
3664 5615 1.173444 TATTGTGGGCGCGTTTGGTT 61.173 50.000 8.43 0.00 0.00 3.67
3665 5616 1.173444 ATTGTGGGCGCGTTTGGTTA 61.173 50.000 8.43 0.00 0.00 2.85
3666 5617 1.787057 TTGTGGGCGCGTTTGGTTAG 61.787 55.000 8.43 0.00 0.00 2.34
3667 5618 2.111460 TGGGCGCGTTTGGTTAGT 59.889 55.556 8.43 0.00 0.00 2.24
3668 5619 1.526455 TGGGCGCGTTTGGTTAGTT 60.526 52.632 8.43 0.00 0.00 2.24
3669 5620 1.102222 TGGGCGCGTTTGGTTAGTTT 61.102 50.000 8.43 0.00 0.00 2.66
3670 5621 0.386352 GGGCGCGTTTGGTTAGTTTC 60.386 55.000 8.43 0.00 0.00 2.78
3671 5622 0.589708 GGCGCGTTTGGTTAGTTTCT 59.410 50.000 8.43 0.00 0.00 2.52
3672 5623 1.399343 GGCGCGTTTGGTTAGTTTCTC 60.399 52.381 8.43 0.00 0.00 2.87
3673 5624 1.262151 GCGCGTTTGGTTAGTTTCTCA 59.738 47.619 8.43 0.00 0.00 3.27
3674 5625 2.661979 GCGCGTTTGGTTAGTTTCTCAG 60.662 50.000 8.43 0.00 0.00 3.35
3675 5626 2.661979 CGCGTTTGGTTAGTTTCTCAGC 60.662 50.000 0.00 0.00 0.00 4.26
3676 5627 2.661979 GCGTTTGGTTAGTTTCTCAGCG 60.662 50.000 0.00 0.00 0.00 5.18
3677 5628 2.096417 CGTTTGGTTAGTTTCTCAGCGG 60.096 50.000 0.00 0.00 0.00 5.52
3678 5629 3.135994 GTTTGGTTAGTTTCTCAGCGGA 58.864 45.455 0.00 0.00 0.00 5.54
3679 5630 2.743636 TGGTTAGTTTCTCAGCGGAG 57.256 50.000 7.64 7.64 42.80 4.63
3694 5645 3.775654 GAGCCTGTCCCCGTGGAG 61.776 72.222 0.00 0.00 42.85 3.86
3698 5649 4.087892 CTGTCCCCGTGGAGCCTG 62.088 72.222 0.00 0.00 42.85 4.85
3701 5652 4.974438 TCCCCGTGGAGCCTGGTT 62.974 66.667 0.00 0.00 35.03 3.67
3702 5653 4.410400 CCCCGTGGAGCCTGGTTC 62.410 72.222 1.35 1.35 0.00 3.62
3703 5654 3.636231 CCCGTGGAGCCTGGTTCA 61.636 66.667 12.78 0.00 0.00 3.18
3704 5655 2.046892 CCGTGGAGCCTGGTTCAG 60.047 66.667 12.78 3.30 0.00 3.02
3705 5656 2.743718 CGTGGAGCCTGGTTCAGT 59.256 61.111 12.78 0.00 0.00 3.41
3706 5657 1.541310 CCGTGGAGCCTGGTTCAGTA 61.541 60.000 12.78 0.00 0.00 2.74
3707 5658 0.537188 CGTGGAGCCTGGTTCAGTAT 59.463 55.000 12.78 0.00 0.00 2.12
3708 5659 1.754803 CGTGGAGCCTGGTTCAGTATA 59.245 52.381 12.78 0.00 0.00 1.47
3709 5660 2.481449 CGTGGAGCCTGGTTCAGTATAC 60.481 54.545 12.78 0.00 0.00 1.47
3710 5661 2.500098 GTGGAGCCTGGTTCAGTATACA 59.500 50.000 12.78 0.00 0.00 2.29
3711 5662 2.766263 TGGAGCCTGGTTCAGTATACAG 59.234 50.000 12.78 0.00 0.00 2.74
3715 5666 3.460857 CCTGGTTCAGTATACAGGCTC 57.539 52.381 5.50 0.00 43.41 4.70
3716 5667 3.034635 CCTGGTTCAGTATACAGGCTCT 58.965 50.000 5.50 0.00 43.41 4.09
3717 5668 3.181471 CCTGGTTCAGTATACAGGCTCTG 60.181 52.174 5.50 1.16 43.41 3.35
3718 5669 2.766263 TGGTTCAGTATACAGGCTCTGG 59.234 50.000 5.50 0.00 35.51 3.86
3719 5670 2.103263 GGTTCAGTATACAGGCTCTGGG 59.897 54.545 5.50 0.00 35.51 4.45
3720 5671 1.414158 TCAGTATACAGGCTCTGGGC 58.586 55.000 5.50 0.00 35.51 5.36
3729 5680 4.477413 GCTCTGGGCCATCATCTG 57.523 61.111 6.72 0.00 34.27 2.90
3730 5681 1.897615 GCTCTGGGCCATCATCTGC 60.898 63.158 6.72 1.60 34.27 4.26
3731 5682 1.530283 CTCTGGGCCATCATCTGCA 59.470 57.895 6.72 0.00 0.00 4.41
3732 5683 0.110678 CTCTGGGCCATCATCTGCAT 59.889 55.000 6.72 0.00 0.00 3.96
3733 5684 0.179001 TCTGGGCCATCATCTGCATG 60.179 55.000 6.72 0.00 0.00 4.06
3734 5685 0.467474 CTGGGCCATCATCTGCATGT 60.467 55.000 6.72 0.00 0.00 3.21
3735 5686 0.845337 TGGGCCATCATCTGCATGTA 59.155 50.000 0.00 0.00 0.00 2.29
3736 5687 1.202842 TGGGCCATCATCTGCATGTAG 60.203 52.381 0.00 4.14 0.00 2.74
3737 5688 1.202855 GGGCCATCATCTGCATGTAGT 60.203 52.381 10.80 0.00 0.00 2.73
3738 5689 2.579873 GGCCATCATCTGCATGTAGTT 58.420 47.619 10.80 0.00 0.00 2.24
3739 5690 2.954318 GGCCATCATCTGCATGTAGTTT 59.046 45.455 10.80 0.00 0.00 2.66
3740 5691 3.243301 GGCCATCATCTGCATGTAGTTTG 60.243 47.826 10.80 9.83 0.00 2.93
3741 5692 3.243301 GCCATCATCTGCATGTAGTTTGG 60.243 47.826 10.80 13.18 0.00 3.28
3742 5693 3.949754 CCATCATCTGCATGTAGTTTGGT 59.050 43.478 10.80 3.87 0.00 3.67
3743 5694 4.400251 CCATCATCTGCATGTAGTTTGGTT 59.600 41.667 10.80 0.46 0.00 3.67
3744 5695 5.337554 CATCATCTGCATGTAGTTTGGTTG 58.662 41.667 10.80 7.86 0.00 3.77
3745 5696 3.191162 TCATCTGCATGTAGTTTGGTTGC 59.809 43.478 10.80 0.00 0.00 4.17
3746 5697 1.885887 TCTGCATGTAGTTTGGTTGCC 59.114 47.619 10.80 0.00 32.39 4.52
3747 5698 1.888512 CTGCATGTAGTTTGGTTGCCT 59.111 47.619 2.12 0.00 32.39 4.75
3748 5699 1.612950 TGCATGTAGTTTGGTTGCCTG 59.387 47.619 0.00 0.00 32.39 4.85
3749 5700 1.669795 GCATGTAGTTTGGTTGCCTGC 60.670 52.381 0.00 0.00 0.00 4.85
3750 5701 1.612950 CATGTAGTTTGGTTGCCTGCA 59.387 47.619 0.00 0.00 0.00 4.41
3751 5702 1.993956 TGTAGTTTGGTTGCCTGCAT 58.006 45.000 0.00 0.00 0.00 3.96
3752 5703 2.315176 TGTAGTTTGGTTGCCTGCATT 58.685 42.857 0.00 0.00 0.00 3.56
3753 5704 3.491342 TGTAGTTTGGTTGCCTGCATTA 58.509 40.909 0.00 0.00 0.00 1.90
3754 5705 3.891977 TGTAGTTTGGTTGCCTGCATTAA 59.108 39.130 0.00 0.00 0.00 1.40
3755 5706 3.665745 AGTTTGGTTGCCTGCATTAAG 57.334 42.857 0.00 0.00 0.00 1.85
3756 5707 2.068519 GTTTGGTTGCCTGCATTAAGC 58.931 47.619 0.00 0.00 45.96 3.09
3757 5708 0.607620 TTGGTTGCCTGCATTAAGCC 59.392 50.000 0.00 0.00 44.83 4.35
3758 5709 0.251742 TGGTTGCCTGCATTAAGCCT 60.252 50.000 0.00 0.00 44.83 4.58
3759 5710 1.005332 TGGTTGCCTGCATTAAGCCTA 59.995 47.619 0.00 0.00 44.83 3.93
3760 5711 2.099405 GGTTGCCTGCATTAAGCCTAA 58.901 47.619 0.00 0.00 44.83 2.69
3761 5712 2.159240 GGTTGCCTGCATTAAGCCTAAC 60.159 50.000 0.00 0.00 44.83 2.34
3762 5713 2.755103 GTTGCCTGCATTAAGCCTAACT 59.245 45.455 0.00 0.00 44.83 2.24
3763 5714 2.643551 TGCCTGCATTAAGCCTAACTC 58.356 47.619 0.00 0.00 44.83 3.01
3764 5715 2.239654 TGCCTGCATTAAGCCTAACTCT 59.760 45.455 0.00 0.00 44.83 3.24
3765 5716 2.875317 GCCTGCATTAAGCCTAACTCTC 59.125 50.000 0.00 0.00 44.83 3.20
3766 5717 3.682718 GCCTGCATTAAGCCTAACTCTCA 60.683 47.826 0.00 0.00 44.83 3.27
3767 5718 4.712476 CCTGCATTAAGCCTAACTCTCAT 58.288 43.478 0.00 0.00 44.83 2.90
3768 5719 5.743130 GCCTGCATTAAGCCTAACTCTCATA 60.743 44.000 0.00 0.00 44.83 2.15
3769 5720 5.698545 CCTGCATTAAGCCTAACTCTCATAC 59.301 44.000 0.00 0.00 44.83 2.39
3770 5721 6.463614 CCTGCATTAAGCCTAACTCTCATACT 60.464 42.308 0.00 0.00 44.83 2.12
3771 5722 6.516718 TGCATTAAGCCTAACTCTCATACTC 58.483 40.000 0.00 0.00 44.83 2.59
3772 5723 5.929415 GCATTAAGCCTAACTCTCATACTCC 59.071 44.000 0.00 0.00 37.23 3.85
3773 5724 6.459923 CATTAAGCCTAACTCTCATACTCCC 58.540 44.000 0.00 0.00 0.00 4.30
3774 5725 3.983533 AGCCTAACTCTCATACTCCCT 57.016 47.619 0.00 0.00 0.00 4.20
3775 5726 3.571590 AGCCTAACTCTCATACTCCCTG 58.428 50.000 0.00 0.00 0.00 4.45
3776 5727 3.052490 AGCCTAACTCTCATACTCCCTGT 60.052 47.826 0.00 0.00 0.00 4.00
3777 5728 3.068873 GCCTAACTCTCATACTCCCTGTG 59.931 52.174 0.00 0.00 0.00 3.66
3778 5729 3.639094 CCTAACTCTCATACTCCCTGTGG 59.361 52.174 0.00 0.00 0.00 4.17
3779 5730 2.930109 ACTCTCATACTCCCTGTGGT 57.070 50.000 0.00 0.00 0.00 4.16
3780 5731 2.461695 ACTCTCATACTCCCTGTGGTG 58.538 52.381 0.00 0.00 0.00 4.17
3781 5732 2.225394 ACTCTCATACTCCCTGTGGTGT 60.225 50.000 0.00 0.00 41.19 4.16
3782 5733 3.011369 ACTCTCATACTCCCTGTGGTGTA 59.989 47.826 0.00 0.00 42.95 2.90
3783 5734 4.023980 CTCTCATACTCCCTGTGGTGTAA 58.976 47.826 0.00 0.00 42.28 2.41
3784 5735 4.422057 TCTCATACTCCCTGTGGTGTAAA 58.578 43.478 0.00 0.00 42.28 2.01
3785 5736 5.030147 TCTCATACTCCCTGTGGTGTAAAT 58.970 41.667 0.00 0.00 42.28 1.40
3786 5737 5.487488 TCTCATACTCCCTGTGGTGTAAATT 59.513 40.000 0.00 0.00 42.28 1.82
3787 5738 5.496556 TCATACTCCCTGTGGTGTAAATTG 58.503 41.667 0.00 0.00 42.28 2.32
3788 5739 2.514803 ACTCCCTGTGGTGTAAATTGC 58.485 47.619 0.00 0.00 36.61 3.56
3789 5740 2.158534 ACTCCCTGTGGTGTAAATTGCA 60.159 45.455 0.00 0.00 36.61 4.08
3790 5741 2.228822 CTCCCTGTGGTGTAAATTGCAC 59.771 50.000 5.63 5.63 36.22 4.57
3791 5742 1.959985 CCCTGTGGTGTAAATTGCACA 59.040 47.619 15.56 0.00 38.51 4.57
3792 5743 2.363680 CCCTGTGGTGTAAATTGCACAA 59.636 45.455 15.56 1.59 38.51 3.33
3793 5744 3.181471 CCCTGTGGTGTAAATTGCACAAA 60.181 43.478 15.56 1.08 38.51 2.83
3794 5745 4.050553 CCTGTGGTGTAAATTGCACAAAG 58.949 43.478 15.56 9.13 38.51 2.77
3795 5746 3.452474 TGTGGTGTAAATTGCACAAAGC 58.548 40.909 15.56 3.74 45.96 3.51
3796 5747 2.799978 GTGGTGTAAATTGCACAAAGCC 59.200 45.455 15.56 0.00 44.83 4.35
3797 5748 2.224161 TGGTGTAAATTGCACAAAGCCC 60.224 45.455 15.56 0.00 44.83 5.19
3798 5749 2.224161 GGTGTAAATTGCACAAAGCCCA 60.224 45.455 15.56 0.00 44.83 5.36
3799 5750 3.462021 GTGTAAATTGCACAAAGCCCAA 58.538 40.909 9.29 0.00 44.83 4.12
3800 5751 3.247411 GTGTAAATTGCACAAAGCCCAAC 59.753 43.478 9.29 0.00 44.83 3.77
3801 5752 3.133721 TGTAAATTGCACAAAGCCCAACT 59.866 39.130 0.00 0.00 44.83 3.16
3802 5753 3.280197 AAATTGCACAAAGCCCAACTT 57.720 38.095 0.00 0.00 44.83 2.66
3803 5754 2.243602 ATTGCACAAAGCCCAACTTG 57.756 45.000 0.00 0.00 44.83 3.16
3804 5755 0.461693 TTGCACAAAGCCCAACTTGC 60.462 50.000 0.00 0.00 44.83 4.01
3805 5756 1.143620 GCACAAAGCCCAACTTGCA 59.856 52.632 0.00 0.00 39.09 4.08
3806 5757 0.249996 GCACAAAGCCCAACTTGCAT 60.250 50.000 0.00 0.00 39.09 3.96
3807 5758 1.787012 CACAAAGCCCAACTTGCATC 58.213 50.000 0.00 0.00 39.09 3.91
3808 5759 1.342174 CACAAAGCCCAACTTGCATCT 59.658 47.619 0.00 0.00 39.09 2.90
3809 5760 2.041701 ACAAAGCCCAACTTGCATCTT 58.958 42.857 0.00 0.00 39.09 2.40
3810 5761 3.005684 CACAAAGCCCAACTTGCATCTTA 59.994 43.478 0.00 0.00 39.09 2.10
3811 5762 3.640967 ACAAAGCCCAACTTGCATCTTAA 59.359 39.130 0.00 0.00 39.09 1.85
3812 5763 4.100808 ACAAAGCCCAACTTGCATCTTAAA 59.899 37.500 0.00 0.00 39.09 1.52
3813 5764 4.953940 AAGCCCAACTTGCATCTTAAAA 57.046 36.364 0.00 0.00 37.17 1.52
3814 5765 4.953940 AGCCCAACTTGCATCTTAAAAA 57.046 36.364 0.00 0.00 0.00 1.94
3830 5781 1.496934 AAAAACGGCCAATTTGAGCG 58.503 45.000 2.24 0.00 0.00 5.03
3831 5782 0.943835 AAAACGGCCAATTTGAGCGC 60.944 50.000 2.24 0.00 0.00 5.92
3832 5783 1.805428 AAACGGCCAATTTGAGCGCT 61.805 50.000 11.27 11.27 0.00 5.92
3833 5784 2.100991 CGGCCAATTTGAGCGCTC 59.899 61.111 30.42 30.42 0.00 5.03
3834 5785 2.491621 GGCCAATTTGAGCGCTCC 59.508 61.111 33.23 16.27 0.00 4.70
3835 5786 2.048603 GGCCAATTTGAGCGCTCCT 61.049 57.895 33.23 16.06 0.00 3.69
3836 5787 1.138247 GCCAATTTGAGCGCTCCTG 59.862 57.895 33.23 22.90 0.00 3.86
3837 5788 1.805254 CCAATTTGAGCGCTCCTGG 59.195 57.895 33.23 27.00 0.00 4.45
3838 5789 1.138247 CAATTTGAGCGCTCCTGGC 59.862 57.895 33.23 10.71 37.64 4.85
3847 5798 4.785453 GCTCCTGGCGGGTTGAGG 62.785 72.222 13.14 0.00 36.25 3.86
3848 5799 4.101448 CTCCTGGCGGGTTGAGGG 62.101 72.222 13.14 0.00 36.25 4.30
3855 5806 2.046700 CGGGTTGAGGGCGCTTTA 60.047 61.111 7.64 0.00 0.00 1.85
3856 5807 1.673009 CGGGTTGAGGGCGCTTTAA 60.673 57.895 7.64 0.75 0.00 1.52
3857 5808 1.644786 CGGGTTGAGGGCGCTTTAAG 61.645 60.000 7.64 0.00 0.00 1.85
3858 5809 1.313091 GGGTTGAGGGCGCTTTAAGG 61.313 60.000 7.64 0.00 0.00 2.69
3859 5810 1.506718 GTTGAGGGCGCTTTAAGGC 59.493 57.895 7.64 0.00 0.00 4.35
3864 5815 2.272471 GGCGCTTTAAGGCCTCCT 59.728 61.111 5.23 0.00 45.93 3.69
3865 5816 1.378646 GGCGCTTTAAGGCCTCCTT 60.379 57.895 5.23 3.40 46.63 3.36
3866 5817 0.965866 GGCGCTTTAAGGCCTCCTTT 60.966 55.000 5.23 0.00 41.69 3.11
3867 5818 0.171231 GCGCTTTAAGGCCTCCTTTG 59.829 55.000 5.23 0.00 41.69 2.77
3868 5819 0.811281 CGCTTTAAGGCCTCCTTTGG 59.189 55.000 5.23 0.00 41.69 3.28
3869 5820 1.886655 CGCTTTAAGGCCTCCTTTGGT 60.887 52.381 5.23 0.00 41.69 3.67
3870 5821 2.248248 GCTTTAAGGCCTCCTTTGGTT 58.752 47.619 5.23 0.00 41.69 3.67
3871 5822 2.231478 GCTTTAAGGCCTCCTTTGGTTC 59.769 50.000 5.23 0.00 41.69 3.62
3872 5823 3.496331 CTTTAAGGCCTCCTTTGGTTCA 58.504 45.455 5.23 0.00 41.69 3.18
3873 5824 3.825908 TTAAGGCCTCCTTTGGTTCAT 57.174 42.857 5.23 0.00 41.69 2.57
3874 5825 4.938575 TTAAGGCCTCCTTTGGTTCATA 57.061 40.909 5.23 0.00 41.69 2.15
3875 5826 3.372440 AAGGCCTCCTTTGGTTCATAG 57.628 47.619 5.23 0.00 41.69 2.23
3876 5827 1.566231 AGGCCTCCTTTGGTTCATAGG 59.434 52.381 0.00 0.00 34.61 2.57
3877 5828 1.410224 GGCCTCCTTTGGTTCATAGGG 60.410 57.143 0.00 0.00 34.20 3.53
3878 5829 1.285078 GCCTCCTTTGGTTCATAGGGT 59.715 52.381 4.94 0.00 34.20 4.34
3879 5830 2.945890 GCCTCCTTTGGTTCATAGGGTG 60.946 54.545 4.94 0.00 34.20 4.61
3880 5831 2.357154 CCTCCTTTGGTTCATAGGGTGG 60.357 54.545 4.94 4.59 34.20 4.61
3881 5832 2.576191 CTCCTTTGGTTCATAGGGTGGA 59.424 50.000 4.94 0.00 34.20 4.02
3882 5833 2.576191 TCCTTTGGTTCATAGGGTGGAG 59.424 50.000 4.94 0.00 34.20 3.86
3883 5834 2.576191 CCTTTGGTTCATAGGGTGGAGA 59.424 50.000 0.00 0.00 30.68 3.71
3884 5835 3.203040 CCTTTGGTTCATAGGGTGGAGAT 59.797 47.826 0.00 0.00 30.68 2.75
3885 5836 3.931907 TTGGTTCATAGGGTGGAGATG 57.068 47.619 0.00 0.00 0.00 2.90
3886 5837 3.129262 TGGTTCATAGGGTGGAGATGA 57.871 47.619 0.00 0.00 0.00 2.92
3887 5838 2.771943 TGGTTCATAGGGTGGAGATGAC 59.228 50.000 0.00 0.00 29.44 3.06
3888 5839 2.771943 GGTTCATAGGGTGGAGATGACA 59.228 50.000 0.00 0.00 29.44 3.58
3889 5840 3.392616 GGTTCATAGGGTGGAGATGACAT 59.607 47.826 0.00 0.00 29.44 3.06
3890 5841 4.384056 GTTCATAGGGTGGAGATGACATG 58.616 47.826 0.00 0.00 29.44 3.21
3891 5842 3.657610 TCATAGGGTGGAGATGACATGT 58.342 45.455 0.00 0.00 0.00 3.21
3892 5843 4.814967 TCATAGGGTGGAGATGACATGTA 58.185 43.478 0.00 0.00 0.00 2.29
3893 5844 5.406163 TCATAGGGTGGAGATGACATGTAT 58.594 41.667 0.00 0.00 0.00 2.29
3894 5845 5.481824 TCATAGGGTGGAGATGACATGTATC 59.518 44.000 0.00 2.87 0.00 2.24
3895 5846 3.933886 AGGGTGGAGATGACATGTATCT 58.066 45.455 14.05 14.05 37.59 1.98
3896 5847 3.900601 AGGGTGGAGATGACATGTATCTC 59.099 47.826 23.39 23.39 46.23 2.75
3906 5857 9.368674 GAGATGACATGTATCTCAAATCCTATG 57.631 37.037 24.95 0.00 46.22 2.23
3907 5858 9.097946 AGATGACATGTATCTCAAATCCTATGA 57.902 33.333 0.00 0.00 29.05 2.15
3908 5859 9.368674 GATGACATGTATCTCAAATCCTATGAG 57.631 37.037 0.00 0.00 44.53 2.90
3909 5860 8.255111 TGACATGTATCTCAAATCCTATGAGT 57.745 34.615 0.00 0.00 43.77 3.41
3910 5861 9.367160 TGACATGTATCTCAAATCCTATGAGTA 57.633 33.333 0.00 0.00 43.77 2.59
3911 5862 9.853555 GACATGTATCTCAAATCCTATGAGTAG 57.146 37.037 0.00 0.00 43.77 2.57
3925 5876 6.107901 CTATGAGTAGGAATGGGAAAGGAG 57.892 45.833 0.00 0.00 0.00 3.69
3926 5877 4.074799 TGAGTAGGAATGGGAAAGGAGA 57.925 45.455 0.00 0.00 0.00 3.71
3927 5878 4.635473 TGAGTAGGAATGGGAAAGGAGAT 58.365 43.478 0.00 0.00 0.00 2.75
3928 5879 4.410228 TGAGTAGGAATGGGAAAGGAGATG 59.590 45.833 0.00 0.00 0.00 2.90
3929 5880 2.744352 AGGAATGGGAAAGGAGATGC 57.256 50.000 0.00 0.00 0.00 3.91
3930 5881 1.216427 AGGAATGGGAAAGGAGATGCC 59.784 52.381 0.00 0.00 0.00 4.40
3931 5882 1.697284 GAATGGGAAAGGAGATGCCC 58.303 55.000 0.00 0.00 41.08 5.36
3932 5883 1.216427 GAATGGGAAAGGAGATGCCCT 59.784 52.381 0.00 0.00 41.28 5.19
3940 5891 3.744940 AAGGAGATGCCCTTTGATTCA 57.255 42.857 0.00 0.00 43.68 2.57
3941 5892 3.010200 AGGAGATGCCCTTTGATTCAC 57.990 47.619 0.00 0.00 37.37 3.18
3942 5893 2.309755 AGGAGATGCCCTTTGATTCACA 59.690 45.455 0.00 0.00 37.37 3.58
3943 5894 3.053095 AGGAGATGCCCTTTGATTCACAT 60.053 43.478 0.00 0.00 37.37 3.21
3944 5895 3.317430 GGAGATGCCCTTTGATTCACATC 59.683 47.826 6.23 6.23 35.31 3.06
3945 5896 3.949754 GAGATGCCCTTTGATTCACATCA 59.050 43.478 13.54 0.00 37.67 3.07
3946 5897 4.543689 AGATGCCCTTTGATTCACATCAT 58.456 39.130 13.54 2.83 39.28 2.45
3947 5898 5.698104 AGATGCCCTTTGATTCACATCATA 58.302 37.500 13.54 0.00 39.28 2.15
3948 5899 5.768662 AGATGCCCTTTGATTCACATCATAG 59.231 40.000 13.54 1.71 39.28 2.23
3978 5929 8.635765 TTTTTCATTGAGTCTAGGCTAATGTT 57.364 30.769 18.08 0.00 32.22 2.71
3979 5930 8.635765 TTTTCATTGAGTCTAGGCTAATGTTT 57.364 30.769 18.08 0.00 32.22 2.83
3980 5931 9.733556 TTTTCATTGAGTCTAGGCTAATGTTTA 57.266 29.630 18.08 8.82 32.22 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 1315 0.176910 TTGCCATATTGACGCGAGGA 59.823 50.000 15.93 0.00 0.00 3.71
32 1319 2.036217 CGAAATTGCCATATTGACGCG 58.964 47.619 3.53 3.53 0.00 6.01
33 1320 3.065019 ACGAAATTGCCATATTGACGC 57.935 42.857 0.00 0.00 0.00 5.19
41 1331 6.405397 GGAACCTATGTAAACGAAATTGCCAT 60.405 38.462 0.00 0.00 0.00 4.40
72 1362 2.120765 AAAAAGGAGCGGCGGTTTT 58.879 47.368 14.71 8.09 0.00 2.43
73 1363 3.850508 AAAAAGGAGCGGCGGTTT 58.149 50.000 14.71 0.63 0.00 3.27
90 1380 2.034053 GTCGATTCCAGGCAAAACACAA 59.966 45.455 0.00 0.00 0.00 3.33
93 1383 0.871722 CGTCGATTCCAGGCAAAACA 59.128 50.000 0.00 0.00 0.00 2.83
96 1386 2.038269 GGCGTCGATTCCAGGCAAA 61.038 57.895 0.00 0.00 0.00 3.68
98 1388 4.812476 CGGCGTCGATTCCAGGCA 62.812 66.667 1.44 0.00 39.00 4.75
104 1394 0.179129 TAGAAACCCGGCGTCGATTC 60.179 55.000 12.93 12.66 39.00 2.52
116 1406 5.131067 AGAGTGGGTGTTTTTCTAGAAACC 58.869 41.667 17.51 15.29 38.45 3.27
129 1433 1.620822 GCAAAATGGAGAGTGGGTGT 58.379 50.000 0.00 0.00 0.00 4.16
135 1439 2.191128 AGAAGCGCAAAATGGAGAGT 57.809 45.000 11.47 0.00 0.00 3.24
138 1442 1.732259 ACGTAGAAGCGCAAAATGGAG 59.268 47.619 11.47 0.00 34.88 3.86
146 1450 2.443887 AACCTTAACGTAGAAGCGCA 57.556 45.000 11.47 0.00 34.88 6.09
154 1458 5.589452 TGCTTCTTTGGAAAACCTTAACGTA 59.411 36.000 0.00 0.00 0.00 3.57
167 1471 5.243730 AGGAATCGAATTTTGCTTCTTTGGA 59.756 36.000 0.00 0.00 0.00 3.53
174 1478 3.699538 GGGGTAGGAATCGAATTTTGCTT 59.300 43.478 0.00 0.00 0.00 3.91
176 1480 3.288092 AGGGGTAGGAATCGAATTTTGC 58.712 45.455 0.00 0.00 0.00 3.68
179 1483 3.391626 GGAGAGGGGTAGGAATCGAATTT 59.608 47.826 0.00 0.00 0.00 1.82
185 1489 1.133419 AGTCGGAGAGGGGTAGGAATC 60.133 57.143 0.00 0.00 36.95 2.52
193 1497 2.681778 AGCACAGTCGGAGAGGGG 60.682 66.667 0.00 0.00 36.95 4.79
211 1515 3.005684 TCCATTTTTGTGCTGATGGTGTC 59.994 43.478 0.00 0.00 39.95 3.67
221 1525 5.572896 CCGTAGATTTCTTCCATTTTTGTGC 59.427 40.000 0.00 0.00 0.00 4.57
232 1537 5.642491 AGTAGCAAAACCCGTAGATTTCTTC 59.358 40.000 0.00 0.00 0.00 2.87
243 1548 2.076863 CCTGAGAAGTAGCAAAACCCG 58.923 52.381 0.00 0.00 0.00 5.28
244 1549 1.813178 GCCTGAGAAGTAGCAAAACCC 59.187 52.381 0.00 0.00 0.00 4.11
255 1560 2.815647 GTTCGGGCGCCTGAGAAG 60.816 66.667 35.07 15.61 32.36 2.85
304 1609 4.121317 TGTTTAGATCAAACCGTCGTGTT 58.879 39.130 14.25 0.00 45.05 3.32
306 1611 4.921470 ATGTTTAGATCAAACCGTCGTG 57.079 40.909 14.25 0.00 45.05 4.35
309 1617 7.494625 TGGATCTTATGTTTAGATCAAACCGTC 59.505 37.037 13.15 6.81 46.35 4.79
327 1635 9.725019 GTGTATACCAATCATGAATGGATCTTA 57.275 33.333 32.09 16.49 39.12 2.10
345 1653 6.897259 TCTTTCTTACAATGCGTGTATACC 57.103 37.500 0.00 0.00 42.37 2.73
346 1654 8.181487 TCTTCTTTCTTACAATGCGTGTATAC 57.819 34.615 0.00 0.00 42.37 1.47
356 1664 7.721399 TGAGGCTTTCTTCTTCTTTCTTACAAT 59.279 33.333 0.00 0.00 0.00 2.71
359 1667 7.497925 TTGAGGCTTTCTTCTTCTTTCTTAC 57.502 36.000 0.00 0.00 0.00 2.34
363 1671 5.159925 GCATTGAGGCTTTCTTCTTCTTTC 58.840 41.667 0.00 0.00 0.00 2.62
369 1677 2.354259 CTCGCATTGAGGCTTTCTTCT 58.646 47.619 0.00 0.00 41.29 2.85
370 1678 2.821307 CTCGCATTGAGGCTTTCTTC 57.179 50.000 0.00 0.00 41.29 2.87
381 1689 2.874086 TCACATTGATAGCCTCGCATTG 59.126 45.455 0.00 0.00 0.00 2.82
412 1720 1.211457 GATGAGGAGATTGCCACAGGT 59.789 52.381 0.00 0.00 32.05 4.00
418 1739 2.332063 TTTCGGATGAGGAGATTGCC 57.668 50.000 0.00 0.00 0.00 4.52
421 1742 9.495572 GTAAATAAGATTTCGGATGAGGAGATT 57.504 33.333 0.00 0.00 0.00 2.40
441 1762 6.110033 TGATGCTAACGGAAGCTTGTAAATA 58.890 36.000 2.10 0.00 43.19 1.40
442 1763 4.941263 TGATGCTAACGGAAGCTTGTAAAT 59.059 37.500 2.10 0.00 43.19 1.40
445 1766 3.603158 TGATGCTAACGGAAGCTTGTA 57.397 42.857 2.10 0.00 43.19 2.41
446 1767 2.472695 TGATGCTAACGGAAGCTTGT 57.527 45.000 2.10 0.00 43.19 3.16
447 1768 2.033407 CGATGATGCTAACGGAAGCTTG 60.033 50.000 2.10 0.00 43.19 4.01
449 1770 1.137086 ACGATGATGCTAACGGAAGCT 59.863 47.619 11.83 0.00 43.19 3.74
450 1771 1.523095 GACGATGATGCTAACGGAAGC 59.477 52.381 4.45 4.45 43.08 3.86
460 1784 0.095935 GTGCTGTGTGACGATGATGC 59.904 55.000 0.00 0.00 0.00 3.91
492 1818 1.490693 CGCGCAACTGTATAGCCTGG 61.491 60.000 8.75 0.00 0.00 4.45
497 1823 4.796830 TCTTTTCTACGCGCAACTGTATAG 59.203 41.667 5.73 0.00 0.00 1.31
499 1825 3.581755 TCTTTTCTACGCGCAACTGTAT 58.418 40.909 5.73 0.00 0.00 2.29
500 1826 3.015934 TCTTTTCTACGCGCAACTGTA 57.984 42.857 5.73 0.00 0.00 2.74
501 1827 1.860676 TCTTTTCTACGCGCAACTGT 58.139 45.000 5.73 0.00 0.00 3.55
502 1828 2.668457 AGATCTTTTCTACGCGCAACTG 59.332 45.455 5.73 0.00 30.96 3.16
503 1829 2.668457 CAGATCTTTTCTACGCGCAACT 59.332 45.455 5.73 0.00 31.77 3.16
504 1830 2.666508 TCAGATCTTTTCTACGCGCAAC 59.333 45.455 5.73 0.00 31.77 4.17
506 1832 2.647529 TCAGATCTTTTCTACGCGCA 57.352 45.000 5.73 0.00 31.77 6.09
507 1833 3.991605 TTTCAGATCTTTTCTACGCGC 57.008 42.857 5.73 0.00 31.77 6.86
508 1834 5.220303 CCTCTTTTCAGATCTTTTCTACGCG 60.220 44.000 3.53 3.53 31.77 6.01
509 1835 5.869888 TCCTCTTTTCAGATCTTTTCTACGC 59.130 40.000 0.00 0.00 31.77 4.42
510 1836 7.093992 ACTCCTCTTTTCAGATCTTTTCTACG 58.906 38.462 0.00 0.00 31.77 3.51
511 1837 7.274686 CGACTCCTCTTTTCAGATCTTTTCTAC 59.725 40.741 0.00 0.00 31.77 2.59
512 1838 7.316640 CGACTCCTCTTTTCAGATCTTTTCTA 58.683 38.462 0.00 0.00 31.77 2.10
513 1839 6.162777 CGACTCCTCTTTTCAGATCTTTTCT 58.837 40.000 0.00 0.00 33.90 2.52
514 1840 5.350091 CCGACTCCTCTTTTCAGATCTTTTC 59.650 44.000 0.00 0.00 0.00 2.29
538 1866 3.851128 GAGGGGCAGGAGTACCGC 61.851 72.222 0.00 0.00 41.83 5.68
539 1867 3.155167 GGAGGGGCAGGAGTACCG 61.155 72.222 0.00 0.00 41.83 4.02
540 1868 2.768769 GGGAGGGGCAGGAGTACC 60.769 72.222 0.00 0.00 0.00 3.34
542 1870 4.103928 GGGGGAGGGGCAGGAGTA 62.104 72.222 0.00 0.00 0.00 2.59
880 2222 2.586245 GTGGGCGGGGTACTTACC 59.414 66.667 0.00 0.00 45.71 2.85
881 2223 2.586245 GGTGGGCGGGGTACTTAC 59.414 66.667 0.00 0.00 0.00 2.34
883 2225 4.669773 AGGGTGGGCGGGGTACTT 62.670 66.667 0.00 0.00 0.00 2.24
884 2226 4.669773 AAGGGTGGGCGGGGTACT 62.670 66.667 0.00 0.00 0.00 2.73
885 2227 3.654143 AAAGGGTGGGCGGGGTAC 61.654 66.667 0.00 0.00 0.00 3.34
886 2228 3.653078 CAAAGGGTGGGCGGGGTA 61.653 66.667 0.00 0.00 0.00 3.69
890 2232 2.034999 TAAGCAAAGGGTGGGCGG 59.965 61.111 0.00 0.00 0.00 6.13
891 2233 0.394352 ATCTAAGCAAAGGGTGGGCG 60.394 55.000 0.00 0.00 0.00 6.13
892 2234 1.064389 AGATCTAAGCAAAGGGTGGGC 60.064 52.381 0.00 0.00 0.00 5.36
897 2239 5.104735 AGTGGAGTAAGATCTAAGCAAAGGG 60.105 44.000 0.00 0.00 0.00 3.95
900 2242 5.394224 CGGAGTGGAGTAAGATCTAAGCAAA 60.394 44.000 0.00 0.00 0.00 3.68
901 2243 4.098044 CGGAGTGGAGTAAGATCTAAGCAA 59.902 45.833 0.00 0.00 0.00 3.91
903 2245 3.551250 GCGGAGTGGAGTAAGATCTAAGC 60.551 52.174 0.00 0.00 0.00 3.09
905 2247 3.380637 GTGCGGAGTGGAGTAAGATCTAA 59.619 47.826 0.00 0.00 0.00 2.10
906 2248 2.950309 GTGCGGAGTGGAGTAAGATCTA 59.050 50.000 0.00 0.00 0.00 1.98
907 2249 1.751924 GTGCGGAGTGGAGTAAGATCT 59.248 52.381 0.00 0.00 0.00 2.75
908 2250 1.202428 GGTGCGGAGTGGAGTAAGATC 60.202 57.143 0.00 0.00 0.00 2.75
909 2251 0.824759 GGTGCGGAGTGGAGTAAGAT 59.175 55.000 0.00 0.00 0.00 2.40
910 2252 0.541063 TGGTGCGGAGTGGAGTAAGA 60.541 55.000 0.00 0.00 0.00 2.10
912 2254 0.830444 ACTGGTGCGGAGTGGAGTAA 60.830 55.000 0.00 0.00 0.00 2.24
913 2255 0.038599 TACTGGTGCGGAGTGGAGTA 59.961 55.000 0.00 0.00 0.00 2.59
915 2257 1.215647 GTACTGGTGCGGAGTGGAG 59.784 63.158 0.00 0.00 0.00 3.86
916 2258 2.280552 GGTACTGGTGCGGAGTGGA 61.281 63.158 0.00 0.00 0.00 4.02
928 2831 0.949105 ACAGAAAAGCGCCGGTACTG 60.949 55.000 2.29 10.57 0.00 2.74
934 2837 0.586319 TCAGAAACAGAAAAGCGCCG 59.414 50.000 2.29 0.00 0.00 6.46
944 2847 0.390472 GGCTCTCCCGTCAGAAACAG 60.390 60.000 0.00 0.00 0.00 3.16
946 2849 0.321996 AAGGCTCTCCCGTCAGAAAC 59.678 55.000 0.00 0.00 39.21 2.78
963 2874 1.942585 CGAACGCAGCAGAAAAGAAG 58.057 50.000 0.00 0.00 0.00 2.85
964 2875 0.041312 GCGAACGCAGCAGAAAAGAA 60.041 50.000 14.26 0.00 41.49 2.52
965 2876 1.569493 GCGAACGCAGCAGAAAAGA 59.431 52.632 14.26 0.00 41.49 2.52
966 2877 1.441016 GGCGAACGCAGCAGAAAAG 60.441 57.895 20.16 0.00 44.11 2.27
985 2896 2.133553 CATCATGTCGATCTCTGCCAC 58.866 52.381 0.00 0.00 29.21 5.01
1116 3027 1.825474 GAAGTGATTGACCGAGGGAGA 59.175 52.381 0.00 0.00 0.00 3.71
1117 3028 1.550524 TGAAGTGATTGACCGAGGGAG 59.449 52.381 0.00 0.00 0.00 4.30
1182 3093 3.441492 AACAAAACAAAACAAACGCGG 57.559 38.095 12.47 0.00 0.00 6.46
1183 3094 4.204581 ACAAACAAAACAAAACAAACGCG 58.795 34.783 3.53 3.53 0.00 6.01
1184 3095 6.021390 ACAAACAAACAAAACAAAACAAACGC 60.021 30.769 0.00 0.00 0.00 4.84
1185 3096 7.424594 ACAAACAAACAAAACAAAACAAACG 57.575 28.000 0.00 0.00 0.00 3.60
1186 3097 9.663491 GAAACAAACAAACAAAACAAAACAAAC 57.337 25.926 0.00 0.00 0.00 2.93
1187 3098 8.860128 GGAAACAAACAAACAAAACAAAACAAA 58.140 25.926 0.00 0.00 0.00 2.83
1189 3100 7.762382 AGGAAACAAACAAACAAAACAAAACA 58.238 26.923 0.00 0.00 0.00 2.83
1190 3101 8.621921 AAGGAAACAAACAAACAAAACAAAAC 57.378 26.923 0.00 0.00 0.00 2.43
1191 3102 7.915923 GGAAGGAAACAAACAAACAAAACAAAA 59.084 29.630 0.00 0.00 0.00 2.44
1193 3104 6.292919 CGGAAGGAAACAAACAAACAAAACAA 60.293 34.615 0.00 0.00 0.00 2.83
1196 3107 5.539048 TCGGAAGGAAACAAACAAACAAAA 58.461 33.333 0.00 0.00 0.00 2.44
1297 3208 1.227205 GAGCAGCCAGTCCATCTCG 60.227 63.158 0.00 0.00 0.00 4.04
1489 3400 0.877071 TGTCGACGTACCAGAAGTCC 59.123 55.000 11.62 0.00 33.38 3.85
1600 3511 2.674380 CAGGGCAGCCACCACTTC 60.674 66.667 15.19 0.00 0.00 3.01
1690 3601 1.221840 GGCCGCCTTCAGAATCTGA 59.778 57.895 9.18 9.18 38.87 3.27
1705 3616 3.113745 CTGTTGATCGCCATGGCC 58.886 61.111 30.79 17.44 37.98 5.36
1807 3718 5.472820 ACTCAGTGACAGTTAGTAGTACCAC 59.527 44.000 0.00 0.00 0.00 4.16
1841 3752 7.603024 GGTACACTCTTATCAGCAACTTAAGTT 59.397 37.037 15.22 15.22 39.12 2.66
1856 3767 6.237901 ACTTCATGCATTTGGTACACTCTTA 58.762 36.000 0.00 0.00 39.29 2.10
1967 3878 9.844790 TGCAGAAAGAAACAAGACATTATAATG 57.155 29.630 21.42 21.42 42.10 1.90
2252 4163 2.113433 TAGCAGACCGTCGGCTCTC 61.113 63.158 26.50 1.12 44.37 3.20
2297 4208 1.202806 TCAAGGGAAGTCTGTGGCAAG 60.203 52.381 0.00 0.00 0.00 4.01
2379 4290 3.700538 AGCAATCACTTTCAAGGCCATA 58.299 40.909 5.01 0.00 0.00 2.74
2407 4318 8.954350 AGAATCAGTTTTGAATGGACAGATAAG 58.046 33.333 0.00 0.00 36.78 1.73
2449 4360 8.049117 AGAGCAGGTTTCTGATGATAATTGTAA 58.951 33.333 0.00 0.00 40.07 2.41
2469 4386 4.993584 AGTTCAGTGATGTTAACAGAGCAG 59.006 41.667 14.65 4.35 0.00 4.24
2587 4507 1.293498 GAACGCCAAGCTCTCCAGA 59.707 57.895 0.00 0.00 0.00 3.86
2743 4663 0.249280 CGTATGGCGTGTGCTGGATA 60.249 55.000 0.00 0.00 42.25 2.59
2833 4753 4.704833 TTGCTCGGTGGAGGCTGC 62.705 66.667 0.00 0.00 40.80 5.25
2842 4762 1.792118 GCGGGTTCTTTTTGCTCGGT 61.792 55.000 0.00 0.00 0.00 4.69
2999 4922 3.125573 TCTGTCGACCTCGCCGAG 61.126 66.667 14.12 7.25 39.60 4.63
3000 4923 3.429141 GTCTGTCGACCTCGCCGA 61.429 66.667 14.12 0.00 39.60 5.54
3001 4924 3.669036 CTGTCTGTCGACCTCGCCG 62.669 68.421 14.12 0.00 39.47 6.46
3002 4925 2.179517 CTGTCTGTCGACCTCGCC 59.820 66.667 14.12 0.00 39.47 5.54
3003 4926 1.303799 TACCTGTCTGTCGACCTCGC 61.304 60.000 14.12 1.36 39.47 5.03
3004 4927 1.331138 GATACCTGTCTGTCGACCTCG 59.669 57.143 14.12 1.48 39.47 4.63
3005 4928 2.366533 TGATACCTGTCTGTCGACCTC 58.633 52.381 14.12 3.99 39.47 3.85
3006 4929 2.509166 TGATACCTGTCTGTCGACCT 57.491 50.000 14.12 0.00 39.47 3.85
3007 4930 3.381908 AGATTGATACCTGTCTGTCGACC 59.618 47.826 14.12 0.00 39.47 4.79
3008 4931 4.640789 AGATTGATACCTGTCTGTCGAC 57.359 45.455 9.11 9.11 40.64 4.20
3009 4932 4.705023 TGAAGATTGATACCTGTCTGTCGA 59.295 41.667 0.00 0.00 0.00 4.20
3010 4933 4.998788 TGAAGATTGATACCTGTCTGTCG 58.001 43.478 0.00 0.00 0.00 4.35
3011 4934 6.199908 CGAATGAAGATTGATACCTGTCTGTC 59.800 42.308 0.00 0.00 0.00 3.51
3012 4935 6.045318 CGAATGAAGATTGATACCTGTCTGT 58.955 40.000 0.00 0.00 0.00 3.41
3013 4936 6.199908 GTCGAATGAAGATTGATACCTGTCTG 59.800 42.308 0.00 0.00 0.00 3.51
3014 4937 6.127338 TGTCGAATGAAGATTGATACCTGTCT 60.127 38.462 0.00 0.00 0.00 3.41
3036 4959 1.267261 CCGACCGGATCAGTATCTGTC 59.733 57.143 9.46 0.00 36.85 3.51
3130 5056 2.038952 GGGGGTAAAAAGTACACGGTCT 59.961 50.000 0.00 0.00 0.00 3.85
3145 5071 2.040606 GTGAGCAGGGAGGGGGTA 59.959 66.667 0.00 0.00 0.00 3.69
3168 5094 5.814705 CCATCAAGAGTTCACTTACTCCATC 59.185 44.000 0.00 0.00 44.50 3.51
3192 5118 3.058155 TGACTGACAGAGAAACTAGACGC 60.058 47.826 10.08 0.00 0.00 5.19
3225 5160 3.652057 ATAGACATGAACAAGGGGTGG 57.348 47.619 0.00 0.00 0.00 4.61
3226 5161 5.359194 AGTATAGACATGAACAAGGGGTG 57.641 43.478 0.00 0.00 0.00 4.61
3279 5214 1.662629 CACATCTCATGTTCACTCGGC 59.337 52.381 0.00 0.00 42.70 5.54
3280 5215 2.274437 CCACATCTCATGTTCACTCGG 58.726 52.381 0.00 0.00 42.70 4.63
3281 5216 2.964740 ACCACATCTCATGTTCACTCG 58.035 47.619 0.00 0.00 42.70 4.18
3284 5227 2.816087 AGCAACCACATCTCATGTTCAC 59.184 45.455 0.00 0.00 42.70 3.18
3290 5233 1.460504 CAGCAGCAACCACATCTCAT 58.539 50.000 0.00 0.00 0.00 2.90
3297 5240 3.292936 AGCAGCAGCAGCAACCAC 61.293 61.111 12.92 0.00 45.49 4.16
3298 5241 2.679369 TACAGCAGCAGCAGCAACCA 62.679 55.000 12.92 0.00 45.49 3.67
3299 5242 1.919956 CTACAGCAGCAGCAGCAACC 61.920 60.000 12.92 0.00 45.49 3.77
3336 5282 3.636231 CCACCGGTGGCTTCAGGA 61.636 66.667 39.44 0.00 44.73 3.86
3349 5295 1.602377 GTTAACTGTCACAGCACCACC 59.398 52.381 4.13 0.00 34.37 4.61
3487 5436 4.910458 AACAGTACCAGTAGGCAAAGAT 57.090 40.909 0.00 0.00 39.06 2.40
3514 5465 3.303197 GCTGCGATCAGATCAAATCACAG 60.303 47.826 11.12 15.64 42.95 3.66
3573 5524 2.663602 CACTGTCACTGCGTACTCATTC 59.336 50.000 0.00 0.00 0.00 2.67
3595 5546 0.110056 CACCAATGAACGAGCAGTGC 60.110 55.000 7.13 7.13 32.90 4.40
3612 5563 1.991965 CCAATTTGCATACAACGGCAC 59.008 47.619 0.00 0.00 40.23 5.01
3622 5573 5.289083 ACTGTAACCAAACCAATTTGCAT 57.711 34.783 0.00 0.00 43.38 3.96
3631 5582 4.559906 GCCCACAATAACTGTAACCAAACC 60.560 45.833 0.00 0.00 36.10 3.27
3635 5586 2.428491 CGCCCACAATAACTGTAACCA 58.572 47.619 0.00 0.00 36.10 3.67
3636 5587 1.131693 GCGCCCACAATAACTGTAACC 59.868 52.381 0.00 0.00 36.10 2.85
3637 5588 1.201987 CGCGCCCACAATAACTGTAAC 60.202 52.381 0.00 0.00 36.10 2.50
3638 5589 1.080298 CGCGCCCACAATAACTGTAA 58.920 50.000 0.00 0.00 36.10 2.41
3639 5590 0.037139 ACGCGCCCACAATAACTGTA 60.037 50.000 5.73 0.00 36.10 2.74
3640 5591 0.887387 AACGCGCCCACAATAACTGT 60.887 50.000 5.73 0.00 39.56 3.55
3641 5592 0.239879 AAACGCGCCCACAATAACTG 59.760 50.000 5.73 0.00 0.00 3.16
3642 5593 0.239879 CAAACGCGCCCACAATAACT 59.760 50.000 5.73 0.00 0.00 2.24
3643 5594 0.731174 CCAAACGCGCCCACAATAAC 60.731 55.000 5.73 0.00 0.00 1.89
3644 5595 1.173444 ACCAAACGCGCCCACAATAA 61.173 50.000 5.73 0.00 0.00 1.40
3645 5596 1.173444 AACCAAACGCGCCCACAATA 61.173 50.000 5.73 0.00 0.00 1.90
3646 5597 1.173444 TAACCAAACGCGCCCACAAT 61.173 50.000 5.73 0.00 0.00 2.71
3647 5598 1.787057 CTAACCAAACGCGCCCACAA 61.787 55.000 5.73 0.00 0.00 3.33
3648 5599 2.203167 TAACCAAACGCGCCCACA 60.203 55.556 5.73 0.00 0.00 4.17
3649 5600 1.788067 AACTAACCAAACGCGCCCAC 61.788 55.000 5.73 0.00 0.00 4.61
3650 5601 1.102222 AAACTAACCAAACGCGCCCA 61.102 50.000 5.73 0.00 0.00 5.36
3651 5602 0.386352 GAAACTAACCAAACGCGCCC 60.386 55.000 5.73 0.00 0.00 6.13
3652 5603 0.589708 AGAAACTAACCAAACGCGCC 59.410 50.000 5.73 0.00 0.00 6.53
3653 5604 1.262151 TGAGAAACTAACCAAACGCGC 59.738 47.619 5.73 0.00 0.00 6.86
3654 5605 2.661979 GCTGAGAAACTAACCAAACGCG 60.662 50.000 3.53 3.53 0.00 6.01
3655 5606 2.661979 CGCTGAGAAACTAACCAAACGC 60.662 50.000 0.00 0.00 0.00 4.84
3656 5607 2.096417 CCGCTGAGAAACTAACCAAACG 60.096 50.000 0.00 0.00 0.00 3.60
3657 5608 3.135994 TCCGCTGAGAAACTAACCAAAC 58.864 45.455 0.00 0.00 0.00 2.93
3658 5609 3.399330 CTCCGCTGAGAAACTAACCAAA 58.601 45.455 0.00 0.00 41.42 3.28
3659 5610 2.870435 GCTCCGCTGAGAAACTAACCAA 60.870 50.000 9.60 0.00 41.42 3.67
3660 5611 1.337823 GCTCCGCTGAGAAACTAACCA 60.338 52.381 9.60 0.00 41.42 3.67
3661 5612 1.360820 GCTCCGCTGAGAAACTAACC 58.639 55.000 9.60 0.00 41.42 2.85
3662 5613 1.066787 AGGCTCCGCTGAGAAACTAAC 60.067 52.381 9.60 0.00 41.42 2.34
3663 5614 1.066858 CAGGCTCCGCTGAGAAACTAA 60.067 52.381 9.60 0.00 41.42 2.24
3664 5615 0.532573 CAGGCTCCGCTGAGAAACTA 59.467 55.000 9.60 0.00 41.42 2.24
3665 5616 1.294780 CAGGCTCCGCTGAGAAACT 59.705 57.895 9.60 0.76 41.42 2.66
3666 5617 1.004440 ACAGGCTCCGCTGAGAAAC 60.004 57.895 9.60 0.00 41.42 2.78
3667 5618 1.293498 GACAGGCTCCGCTGAGAAA 59.707 57.895 9.60 0.00 41.42 2.52
3668 5619 2.650116 GGACAGGCTCCGCTGAGAA 61.650 63.158 9.60 0.00 41.42 2.87
3669 5620 3.071206 GGACAGGCTCCGCTGAGA 61.071 66.667 9.60 0.00 41.42 3.27
3670 5621 4.154347 GGGACAGGCTCCGCTGAG 62.154 72.222 0.00 0.00 40.56 3.35
3677 5628 3.775654 CTCCACGGGGACAGGCTC 61.776 72.222 0.00 0.00 38.64 4.70
3681 5632 4.087892 CAGGCTCCACGGGGACAG 62.088 72.222 0.00 0.00 38.64 3.51
3684 5635 4.974438 AACCAGGCTCCACGGGGA 62.974 66.667 6.08 6.08 42.29 4.81
3685 5636 4.410400 GAACCAGGCTCCACGGGG 62.410 72.222 0.00 0.00 0.00 5.73
3686 5637 3.612247 CTGAACCAGGCTCCACGGG 62.612 68.421 0.00 0.00 0.00 5.28
3687 5638 1.541310 TACTGAACCAGGCTCCACGG 61.541 60.000 0.00 0.00 35.51 4.94
3688 5639 0.537188 ATACTGAACCAGGCTCCACG 59.463 55.000 0.00 0.00 35.51 4.94
3689 5640 2.500098 TGTATACTGAACCAGGCTCCAC 59.500 50.000 4.17 0.00 35.51 4.02
3690 5641 2.766263 CTGTATACTGAACCAGGCTCCA 59.234 50.000 4.17 0.00 35.51 3.86
3691 5642 2.103263 CCTGTATACTGAACCAGGCTCC 59.897 54.545 11.06 0.00 38.19 4.70
3692 5643 3.460857 CCTGTATACTGAACCAGGCTC 57.539 52.381 11.06 0.00 38.19 4.70
3695 5646 3.034635 AGAGCCTGTATACTGAACCAGG 58.965 50.000 11.06 5.96 45.87 4.45
3696 5647 3.181471 CCAGAGCCTGTATACTGAACCAG 60.181 52.174 11.06 0.00 37.52 4.00
3697 5648 2.766263 CCAGAGCCTGTATACTGAACCA 59.234 50.000 11.06 0.00 32.90 3.67
3698 5649 2.103263 CCCAGAGCCTGTATACTGAACC 59.897 54.545 11.06 0.36 32.90 3.62
3699 5650 2.483889 GCCCAGAGCCTGTATACTGAAC 60.484 54.545 11.06 3.52 34.35 3.18
3700 5651 1.762957 GCCCAGAGCCTGTATACTGAA 59.237 52.381 11.06 0.00 34.35 3.02
3701 5652 1.414158 GCCCAGAGCCTGTATACTGA 58.586 55.000 11.06 0.00 34.35 3.41
3702 5653 3.997672 GCCCAGAGCCTGTATACTG 57.002 57.895 4.17 3.48 34.35 2.74
3712 5663 1.897615 GCAGATGATGGCCCAGAGC 60.898 63.158 0.00 0.00 42.60 4.09
3713 5664 0.110678 ATGCAGATGATGGCCCAGAG 59.889 55.000 0.00 0.00 0.00 3.35
3714 5665 0.179001 CATGCAGATGATGGCCCAGA 60.179 55.000 0.00 0.00 0.00 3.86
3715 5666 0.467474 ACATGCAGATGATGGCCCAG 60.467 55.000 0.00 0.00 33.36 4.45
3716 5667 0.845337 TACATGCAGATGATGGCCCA 59.155 50.000 0.00 0.00 33.36 5.36
3717 5668 1.202855 ACTACATGCAGATGATGGCCC 60.203 52.381 0.00 0.00 33.36 5.80
3718 5669 2.267174 ACTACATGCAGATGATGGCC 57.733 50.000 0.00 0.00 33.36 5.36
3719 5670 3.243301 CCAAACTACATGCAGATGATGGC 60.243 47.826 0.00 0.00 33.36 4.40
3720 5671 3.949754 ACCAAACTACATGCAGATGATGG 59.050 43.478 0.00 5.00 33.36 3.51
3721 5672 5.337554 CAACCAAACTACATGCAGATGATG 58.662 41.667 0.00 0.00 33.36 3.07
3722 5673 4.142315 GCAACCAAACTACATGCAGATGAT 60.142 41.667 0.00 0.00 37.00 2.45
3723 5674 3.191162 GCAACCAAACTACATGCAGATGA 59.809 43.478 0.00 0.00 37.00 2.92
3724 5675 3.504863 GCAACCAAACTACATGCAGATG 58.495 45.455 0.00 0.00 37.00 2.90
3725 5676 2.493278 GGCAACCAAACTACATGCAGAT 59.507 45.455 0.00 0.00 38.73 2.90
3726 5677 1.885887 GGCAACCAAACTACATGCAGA 59.114 47.619 0.00 0.00 38.73 4.26
3727 5678 1.888512 AGGCAACCAAACTACATGCAG 59.111 47.619 0.00 0.00 38.73 4.41
3728 5679 1.612950 CAGGCAACCAAACTACATGCA 59.387 47.619 0.00 0.00 38.73 3.96
3729 5680 1.669795 GCAGGCAACCAAACTACATGC 60.670 52.381 0.00 0.00 36.31 4.06
3730 5681 1.612950 TGCAGGCAACCAAACTACATG 59.387 47.619 0.00 0.00 37.17 3.21
3731 5682 1.993956 TGCAGGCAACCAAACTACAT 58.006 45.000 0.00 0.00 37.17 2.29
3732 5683 1.993956 ATGCAGGCAACCAAACTACA 58.006 45.000 0.00 0.00 37.17 2.74
3733 5684 4.485163 CTTAATGCAGGCAACCAAACTAC 58.515 43.478 0.00 0.00 37.17 2.73
3734 5685 3.056891 GCTTAATGCAGGCAACCAAACTA 60.057 43.478 0.00 0.00 42.31 2.24
3735 5686 2.289010 GCTTAATGCAGGCAACCAAACT 60.289 45.455 0.00 0.00 42.31 2.66
3736 5687 2.068519 GCTTAATGCAGGCAACCAAAC 58.931 47.619 0.00 0.00 42.31 2.93
3737 5688 1.001860 GGCTTAATGCAGGCAACCAAA 59.998 47.619 0.00 0.00 45.15 3.28
3738 5689 0.607620 GGCTTAATGCAGGCAACCAA 59.392 50.000 0.00 0.00 45.15 3.67
3739 5690 0.251742 AGGCTTAATGCAGGCAACCA 60.252 50.000 0.00 0.00 45.15 3.67
3740 5691 1.762708 TAGGCTTAATGCAGGCAACC 58.237 50.000 0.00 0.00 45.15 3.77
3741 5692 2.755103 AGTTAGGCTTAATGCAGGCAAC 59.245 45.455 0.00 0.00 45.15 4.17
3742 5693 3.016736 GAGTTAGGCTTAATGCAGGCAA 58.983 45.455 0.00 0.00 45.15 4.52
3743 5694 2.239654 AGAGTTAGGCTTAATGCAGGCA 59.760 45.455 0.00 0.00 45.15 4.75
3744 5695 2.875317 GAGAGTTAGGCTTAATGCAGGC 59.125 50.000 0.00 0.00 45.15 4.85
3745 5696 4.142609 TGAGAGTTAGGCTTAATGCAGG 57.857 45.455 0.00 0.00 45.15 4.85
3746 5697 6.520272 AGTATGAGAGTTAGGCTTAATGCAG 58.480 40.000 0.00 0.00 45.15 4.41
3747 5698 6.463049 GGAGTATGAGAGTTAGGCTTAATGCA 60.463 42.308 0.00 0.00 45.15 3.96
3748 5699 5.929415 GGAGTATGAGAGTTAGGCTTAATGC 59.071 44.000 0.00 0.00 41.94 3.56
3749 5700 6.268847 AGGGAGTATGAGAGTTAGGCTTAATG 59.731 42.308 0.00 0.00 0.00 1.90
3750 5701 6.268847 CAGGGAGTATGAGAGTTAGGCTTAAT 59.731 42.308 0.00 0.00 0.00 1.40
3751 5702 5.598830 CAGGGAGTATGAGAGTTAGGCTTAA 59.401 44.000 0.00 0.00 0.00 1.85
3752 5703 5.141182 CAGGGAGTATGAGAGTTAGGCTTA 58.859 45.833 0.00 0.00 0.00 3.09
3753 5704 3.964031 CAGGGAGTATGAGAGTTAGGCTT 59.036 47.826 0.00 0.00 0.00 4.35
3754 5705 3.052490 ACAGGGAGTATGAGAGTTAGGCT 60.052 47.826 0.00 0.00 0.00 4.58
3755 5706 3.068873 CACAGGGAGTATGAGAGTTAGGC 59.931 52.174 0.00 0.00 0.00 3.93
3756 5707 3.639094 CCACAGGGAGTATGAGAGTTAGG 59.361 52.174 0.00 0.00 35.59 2.69
3757 5708 4.098654 CACCACAGGGAGTATGAGAGTTAG 59.901 50.000 0.00 0.00 38.05 2.34
3758 5709 4.023980 CACCACAGGGAGTATGAGAGTTA 58.976 47.826 0.00 0.00 38.05 2.24
3759 5710 2.834549 CACCACAGGGAGTATGAGAGTT 59.165 50.000 0.00 0.00 38.05 3.01
3760 5711 2.225394 ACACCACAGGGAGTATGAGAGT 60.225 50.000 0.00 0.00 36.11 3.24
3761 5712 2.461695 ACACCACAGGGAGTATGAGAG 58.538 52.381 0.00 0.00 36.11 3.20
3762 5713 2.623418 ACACCACAGGGAGTATGAGA 57.377 50.000 0.00 0.00 36.11 3.27
3763 5714 4.819105 TTTACACCACAGGGAGTATGAG 57.181 45.455 0.00 0.00 39.53 2.90
3764 5715 5.496556 CAATTTACACCACAGGGAGTATGA 58.503 41.667 0.00 0.00 39.53 2.15
3765 5716 4.096382 GCAATTTACACCACAGGGAGTATG 59.904 45.833 0.00 0.00 39.53 2.39
3766 5717 4.263727 TGCAATTTACACCACAGGGAGTAT 60.264 41.667 0.00 0.00 39.53 2.12
3767 5718 3.073209 TGCAATTTACACCACAGGGAGTA 59.927 43.478 0.00 0.00 38.95 2.59
3768 5719 2.158534 TGCAATTTACACCACAGGGAGT 60.159 45.455 0.00 0.00 41.22 3.85
3769 5720 2.228822 GTGCAATTTACACCACAGGGAG 59.771 50.000 0.00 0.00 38.05 4.30
3770 5721 2.235016 GTGCAATTTACACCACAGGGA 58.765 47.619 0.00 0.00 38.05 4.20
3771 5722 1.959985 TGTGCAATTTACACCACAGGG 59.040 47.619 6.03 0.00 37.22 4.45
3772 5723 3.724508 TTGTGCAATTTACACCACAGG 57.275 42.857 6.03 0.00 39.13 4.00
3773 5724 3.490526 GCTTTGTGCAATTTACACCACAG 59.509 43.478 6.03 1.81 39.13 3.66
3774 5725 3.452474 GCTTTGTGCAATTTACACCACA 58.548 40.909 6.03 0.00 42.31 4.17
3775 5726 2.799978 GGCTTTGTGCAATTTACACCAC 59.200 45.455 6.03 0.00 45.15 4.16
3776 5727 2.224161 GGGCTTTGTGCAATTTACACCA 60.224 45.455 6.03 0.00 45.15 4.17
3777 5728 2.224161 TGGGCTTTGTGCAATTTACACC 60.224 45.455 6.03 0.00 45.15 4.16
3778 5729 3.104843 TGGGCTTTGTGCAATTTACAC 57.895 42.857 0.00 2.06 45.15 2.90
3779 5730 3.133721 AGTTGGGCTTTGTGCAATTTACA 59.866 39.130 0.00 0.00 45.15 2.41
3780 5731 3.727726 AGTTGGGCTTTGTGCAATTTAC 58.272 40.909 0.00 0.00 45.15 2.01
3781 5732 4.125703 CAAGTTGGGCTTTGTGCAATTTA 58.874 39.130 0.00 0.00 45.15 1.40
3782 5733 2.944349 CAAGTTGGGCTTTGTGCAATTT 59.056 40.909 0.00 0.00 45.15 1.82
3783 5734 2.563702 CAAGTTGGGCTTTGTGCAATT 58.436 42.857 0.00 0.00 45.15 2.32
3784 5735 1.811176 GCAAGTTGGGCTTTGTGCAAT 60.811 47.619 4.75 0.00 45.15 3.56
3785 5736 0.461693 GCAAGTTGGGCTTTGTGCAA 60.462 50.000 4.75 0.00 45.15 4.08
3786 5737 1.143620 GCAAGTTGGGCTTTGTGCA 59.856 52.632 4.75 0.00 45.15 4.57
3787 5738 0.249996 ATGCAAGTTGGGCTTTGTGC 60.250 50.000 4.75 0.00 41.94 4.57
3788 5739 1.342174 AGATGCAAGTTGGGCTTTGTG 59.658 47.619 4.75 0.00 34.69 3.33
3789 5740 1.708341 AGATGCAAGTTGGGCTTTGT 58.292 45.000 4.75 0.00 34.69 2.83
3790 5741 2.825861 AAGATGCAAGTTGGGCTTTG 57.174 45.000 4.75 0.00 34.69 2.77
3791 5742 4.953940 TTTAAGATGCAAGTTGGGCTTT 57.046 36.364 4.75 0.00 34.69 3.51
3792 5743 4.953940 TTTTAAGATGCAAGTTGGGCTT 57.046 36.364 4.75 0.00 38.08 4.35
3793 5744 4.953940 TTTTTAAGATGCAAGTTGGGCT 57.046 36.364 4.75 0.00 0.00 5.19
3811 5762 1.496934 CGCTCAAATTGGCCGTTTTT 58.503 45.000 0.00 0.00 0.00 1.94
3812 5763 0.943835 GCGCTCAAATTGGCCGTTTT 60.944 50.000 0.00 0.00 0.00 2.43
3813 5764 1.372872 GCGCTCAAATTGGCCGTTT 60.373 52.632 0.00 0.00 0.00 3.60
3814 5765 2.200170 GAGCGCTCAAATTGGCCGTT 62.200 55.000 31.91 0.00 0.00 4.44
3815 5766 2.672996 AGCGCTCAAATTGGCCGT 60.673 55.556 2.64 0.00 0.00 5.68
3816 5767 2.100991 GAGCGCTCAAATTGGCCG 59.899 61.111 31.91 0.00 0.00 6.13
3817 5768 2.048603 AGGAGCGCTCAAATTGGCC 61.049 57.895 36.27 18.83 0.00 5.36
3818 5769 1.138247 CAGGAGCGCTCAAATTGGC 59.862 57.895 36.27 18.46 0.00 4.52
3819 5770 1.805254 CCAGGAGCGCTCAAATTGG 59.195 57.895 36.27 29.70 0.00 3.16
3820 5771 1.138247 GCCAGGAGCGCTCAAATTG 59.862 57.895 36.27 25.83 0.00 2.32
3821 5772 3.595819 GCCAGGAGCGCTCAAATT 58.404 55.556 36.27 17.18 0.00 1.82
3830 5781 4.785453 CCTCAACCCGCCAGGAGC 62.785 72.222 0.00 0.00 41.02 4.70
3831 5782 4.101448 CCCTCAACCCGCCAGGAG 62.101 72.222 0.00 0.00 41.02 3.69
3838 5789 1.644786 CTTAAAGCGCCCTCAACCCG 61.645 60.000 2.29 0.00 0.00 5.28
3839 5790 1.313091 CCTTAAAGCGCCCTCAACCC 61.313 60.000 2.29 0.00 0.00 4.11
3840 5791 1.934220 GCCTTAAAGCGCCCTCAACC 61.934 60.000 2.29 0.00 0.00 3.77
3841 5792 1.506718 GCCTTAAAGCGCCCTCAAC 59.493 57.895 2.29 0.00 0.00 3.18
3842 5793 1.677633 GGCCTTAAAGCGCCCTCAA 60.678 57.895 2.29 0.00 39.39 3.02
3843 5794 2.045340 GGCCTTAAAGCGCCCTCA 60.045 61.111 2.29 0.00 39.39 3.86
3847 5798 0.965866 AAAGGAGGCCTTAAAGCGCC 60.966 55.000 6.77 0.28 43.92 6.53
3848 5799 0.171231 CAAAGGAGGCCTTAAAGCGC 59.829 55.000 6.77 0.00 43.92 5.92
3849 5800 0.811281 CCAAAGGAGGCCTTAAAGCG 59.189 55.000 6.77 0.00 43.92 4.68
3850 5801 1.924731 ACCAAAGGAGGCCTTAAAGC 58.075 50.000 6.77 0.00 43.92 3.51
3851 5802 3.496331 TGAACCAAAGGAGGCCTTAAAG 58.504 45.455 6.77 0.00 43.92 1.85
3852 5803 3.603965 TGAACCAAAGGAGGCCTTAAA 57.396 42.857 6.77 0.00 43.92 1.52
3853 5804 3.825908 ATGAACCAAAGGAGGCCTTAA 57.174 42.857 6.77 0.00 43.92 1.85
3854 5805 3.202151 CCTATGAACCAAAGGAGGCCTTA 59.798 47.826 6.77 0.00 43.92 2.69
3856 5807 1.566231 CCTATGAACCAAAGGAGGCCT 59.434 52.381 3.86 3.86 33.87 5.19
3857 5808 1.410224 CCCTATGAACCAAAGGAGGCC 60.410 57.143 0.00 0.00 31.64 5.19
3858 5809 1.285078 ACCCTATGAACCAAAGGAGGC 59.715 52.381 0.00 0.00 31.64 4.70
3859 5810 2.357154 CCACCCTATGAACCAAAGGAGG 60.357 54.545 0.00 0.00 31.64 4.30
3860 5811 2.576191 TCCACCCTATGAACCAAAGGAG 59.424 50.000 0.00 0.00 31.64 3.69
3861 5812 2.576191 CTCCACCCTATGAACCAAAGGA 59.424 50.000 0.00 0.00 31.64 3.36
3862 5813 2.576191 TCTCCACCCTATGAACCAAAGG 59.424 50.000 0.00 0.00 0.00 3.11
3863 5814 4.080356 TCATCTCCACCCTATGAACCAAAG 60.080 45.833 0.00 0.00 0.00 2.77
3864 5815 3.849574 TCATCTCCACCCTATGAACCAAA 59.150 43.478 0.00 0.00 0.00 3.28
3865 5816 3.199946 GTCATCTCCACCCTATGAACCAA 59.800 47.826 0.00 0.00 31.77 3.67
3866 5817 2.771943 GTCATCTCCACCCTATGAACCA 59.228 50.000 0.00 0.00 31.77 3.67
3867 5818 2.771943 TGTCATCTCCACCCTATGAACC 59.228 50.000 0.00 0.00 31.77 3.62
3868 5819 4.141620 ACATGTCATCTCCACCCTATGAAC 60.142 45.833 0.00 0.00 31.77 3.18
3869 5820 4.040047 ACATGTCATCTCCACCCTATGAA 58.960 43.478 0.00 0.00 31.77 2.57
3870 5821 3.657610 ACATGTCATCTCCACCCTATGA 58.342 45.455 0.00 0.00 0.00 2.15
3871 5822 5.483231 AGATACATGTCATCTCCACCCTATG 59.517 44.000 0.00 0.00 0.00 2.23
3872 5823 5.659503 AGATACATGTCATCTCCACCCTAT 58.340 41.667 0.00 0.00 0.00 2.57
3873 5824 5.079998 AGATACATGTCATCTCCACCCTA 57.920 43.478 0.00 0.00 0.00 3.53
3874 5825 3.900601 GAGATACATGTCATCTCCACCCT 59.099 47.826 22.13 1.91 41.67 4.34
3875 5826 3.643320 TGAGATACATGTCATCTCCACCC 59.357 47.826 25.84 13.27 45.22 4.61
3876 5827 4.944619 TGAGATACATGTCATCTCCACC 57.055 45.455 25.84 13.49 45.22 4.61
3877 5828 6.426328 GGATTTGAGATACATGTCATCTCCAC 59.574 42.308 25.84 18.67 45.22 4.02
3878 5829 6.328410 AGGATTTGAGATACATGTCATCTCCA 59.672 38.462 25.84 19.12 45.22 3.86
3879 5830 6.767456 AGGATTTGAGATACATGTCATCTCC 58.233 40.000 25.84 17.97 45.22 3.71
3880 5831 9.368674 CATAGGATTTGAGATACATGTCATCTC 57.631 37.037 24.04 24.04 45.76 2.75
3881 5832 9.097946 TCATAGGATTTGAGATACATGTCATCT 57.902 33.333 0.00 9.42 35.43 2.90
3882 5833 9.368674 CTCATAGGATTTGAGATACATGTCATC 57.631 37.037 0.00 4.47 42.63 2.92
3883 5834 8.878211 ACTCATAGGATTTGAGATACATGTCAT 58.122 33.333 0.00 0.00 42.63 3.06
3884 5835 8.255111 ACTCATAGGATTTGAGATACATGTCA 57.745 34.615 0.00 0.00 42.63 3.58
3885 5836 9.853555 CTACTCATAGGATTTGAGATACATGTC 57.146 37.037 0.00 0.00 42.63 3.06
3902 5853 5.841237 TCTCCTTTCCCATTCCTACTCATAG 59.159 44.000 0.00 0.00 0.00 2.23
3903 5854 5.788430 TCTCCTTTCCCATTCCTACTCATA 58.212 41.667 0.00 0.00 0.00 2.15
3904 5855 4.635473 TCTCCTTTCCCATTCCTACTCAT 58.365 43.478 0.00 0.00 0.00 2.90
3905 5856 4.074799 TCTCCTTTCCCATTCCTACTCA 57.925 45.455 0.00 0.00 0.00 3.41
3906 5857 4.745172 GCATCTCCTTTCCCATTCCTACTC 60.745 50.000 0.00 0.00 0.00 2.59
3907 5858 3.137360 GCATCTCCTTTCCCATTCCTACT 59.863 47.826 0.00 0.00 0.00 2.57
3908 5859 3.481453 GCATCTCCTTTCCCATTCCTAC 58.519 50.000 0.00 0.00 0.00 3.18
3909 5860 2.443255 GGCATCTCCTTTCCCATTCCTA 59.557 50.000 0.00 0.00 0.00 2.94
3910 5861 1.216427 GGCATCTCCTTTCCCATTCCT 59.784 52.381 0.00 0.00 0.00 3.36
3911 5862 1.697284 GGCATCTCCTTTCCCATTCC 58.303 55.000 0.00 0.00 0.00 3.01
3912 5863 1.216427 AGGGCATCTCCTTTCCCATTC 59.784 52.381 0.00 0.00 41.22 2.67
3913 5864 1.312884 AGGGCATCTCCTTTCCCATT 58.687 50.000 0.00 0.00 41.22 3.16
3914 5865 1.312884 AAGGGCATCTCCTTTCCCAT 58.687 50.000 0.00 0.00 44.14 4.00
3915 5866 2.805164 AAGGGCATCTCCTTTCCCA 58.195 52.632 0.00 0.00 44.14 4.37
3921 5872 2.309755 TGTGAATCAAAGGGCATCTCCT 59.690 45.455 0.00 0.00 39.17 3.69
3922 5873 2.726821 TGTGAATCAAAGGGCATCTCC 58.273 47.619 0.00 0.00 0.00 3.71
3923 5874 3.949754 TGATGTGAATCAAAGGGCATCTC 59.050 43.478 10.68 0.00 35.22 2.75
3924 5875 3.972133 TGATGTGAATCAAAGGGCATCT 58.028 40.909 10.68 0.00 35.22 2.90
3925 5876 4.931661 ATGATGTGAATCAAAGGGCATC 57.068 40.909 4.45 4.45 33.83 3.91
3926 5877 4.831155 CCTATGATGTGAATCAAAGGGCAT 59.169 41.667 0.00 0.00 33.83 4.40
3927 5878 4.079844 TCCTATGATGTGAATCAAAGGGCA 60.080 41.667 0.00 0.00 33.83 5.36
3928 5879 4.464008 TCCTATGATGTGAATCAAAGGGC 58.536 43.478 0.00 0.00 33.83 5.19
3929 5880 7.592885 AAATCCTATGATGTGAATCAAAGGG 57.407 36.000 0.00 0.00 33.83 3.95
3953 5904 8.635765 AACATTAGCCTAGACTCAATGAAAAA 57.364 30.769 12.01 0.00 32.29 1.94
3954 5905 8.635765 AAACATTAGCCTAGACTCAATGAAAA 57.364 30.769 12.01 0.00 32.29 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.