Multiple sequence alignment - TraesCS5A01G340600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G340600 chr5A 100.000 3800 0 0 916 4715 547120874 547117075 0.000000e+00 7018.0
1 TraesCS5A01G340600 chr5A 100.000 635 0 0 1 635 547121789 547121155 0.000000e+00 1173.0
2 TraesCS5A01G340600 chr5D 88.845 3837 339 46 926 4708 432033735 432029934 0.000000e+00 4632.0
3 TraesCS5A01G340600 chr5D 82.874 2178 331 31 2558 4714 443357207 443359363 0.000000e+00 1917.0
4 TraesCS5A01G340600 chr5D 85.748 428 61 0 1596 2023 443355625 443356052 2.000000e-123 453.0
5 TraesCS5A01G340600 chr5D 87.838 148 11 6 493 635 432034146 432034001 2.920000e-37 167.0
6 TraesCS5A01G340600 chr5B 88.770 3001 251 45 925 3870 523932313 523935282 0.000000e+00 3596.0
7 TraesCS5A01G340600 chr5B 81.962 2273 359 39 2469 4714 539802408 539804656 0.000000e+00 1879.0
8 TraesCS5A01G340600 chr5B 83.524 874 127 10 3855 4715 523935923 523936792 0.000000e+00 800.0
9 TraesCS5A01G340600 chr5B 85.748 428 61 0 1596 2023 539800563 539800990 2.000000e-123 453.0
10 TraesCS5A01G340600 chr5B 86.310 168 11 5 453 620 523932129 523932284 6.270000e-39 172.0
11 TraesCS5A01G340600 chr1D 76.274 569 117 17 2765 3324 363122758 363123317 2.150000e-73 287.0
12 TraesCS5A01G340600 chr1D 81.648 267 41 8 1001 1263 11494275 11494537 1.030000e-51 215.0
13 TraesCS5A01G340600 chr1B 82.692 260 41 4 1010 1267 16518256 16518513 1.320000e-55 228.0
14 TraesCS5A01G340600 chr1B 81.467 259 46 2 1010 1267 17339072 17339329 1.330000e-50 211.0
15 TraesCS5A01G340600 chr1B 79.851 268 50 4 1001 1266 17018932 17018667 4.810000e-45 193.0
16 TraesCS5A01G340600 chrUn 81.641 256 45 2 1013 1267 317005223 317004969 1.330000e-50 211.0
17 TraesCS5A01G340600 chrUn 81.641 256 45 2 1013 1267 317985023 317984769 1.330000e-50 211.0
18 TraesCS5A01G340600 chrUn 81.467 259 46 2 1010 1267 346217273 346217530 1.330000e-50 211.0
19 TraesCS5A01G340600 chrUn 89.231 65 4 3 209 270 238523561 238523625 1.410000e-10 78.7
20 TraesCS5A01G340600 chrUn 89.231 65 4 3 209 270 238537670 238537734 1.410000e-10 78.7
21 TraesCS5A01G340600 chrUn 89.231 65 4 3 209 270 271022442 271022506 1.410000e-10 78.7
22 TraesCS5A01G340600 chrUn 89.231 65 4 3 209 270 278812438 278812374 1.410000e-10 78.7
23 TraesCS5A01G340600 chrUn 85.507 69 7 2 209 274 176719711 176719643 8.470000e-08 69.4
24 TraesCS5A01G340600 chr7A 92.188 64 4 1 208 270 510549995 510549932 6.500000e-14 89.8
25 TraesCS5A01G340600 chr7A 85.915 71 9 1 204 274 590778467 590778398 1.820000e-09 75.0
26 TraesCS5A01G340600 chr6D 86.765 68 8 1 207 274 370847794 370847728 1.820000e-09 75.0
27 TraesCS5A01G340600 chr4A 83.784 74 12 0 201 274 462830530 462830457 2.350000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G340600 chr5A 547117075 547121789 4714 True 4095.500000 7018 100.000000 1 4715 2 chr5A.!!$R1 4714
1 TraesCS5A01G340600 chr5D 432029934 432034146 4212 True 2399.500000 4632 88.341500 493 4708 2 chr5D.!!$R1 4215
2 TraesCS5A01G340600 chr5D 443355625 443359363 3738 False 1185.000000 1917 84.311000 1596 4714 2 chr5D.!!$F1 3118
3 TraesCS5A01G340600 chr5B 523932129 523936792 4663 False 1522.666667 3596 86.201333 453 4715 3 chr5B.!!$F1 4262
4 TraesCS5A01G340600 chr5B 539800563 539804656 4093 False 1166.000000 1879 83.855000 1596 4714 2 chr5B.!!$F2 3118
5 TraesCS5A01G340600 chr1D 363122758 363123317 559 False 287.000000 287 76.274000 2765 3324 1 chr1D.!!$F2 559

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
191 192 0.034756 TGGGTTCAGATGTGTCACGG 59.965 55.0 0.00 0.00 0.00 4.94 F
440 441 0.039437 ACTACACCTGACGCGTCAAG 60.039 55.0 38.11 34.41 39.39 3.02 F
1606 1621 0.033504 CCACTCGCAGGTACACAGTT 59.966 55.0 0.00 0.00 0.00 3.16 F
1795 1810 0.108804 TCTCTGTCGTTGGATTCGGC 60.109 55.0 0.00 0.00 0.00 5.54 F
2287 2802 0.394565 CTTTCCTATGGGCTCTCGGG 59.605 60.0 0.00 0.00 0.00 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1515 1530 0.107214 AAGTACATGCCCCGATGTGG 60.107 55.000 0.00 0.0 37.16 4.17 R
2141 2156 0.108615 GATGCATACTAGCGGCGGAT 60.109 55.000 9.78 0.0 37.31 4.18 R
3573 4646 1.396301 GCAGCTTGTTGATCTTCCTCG 59.604 52.381 0.00 0.0 0.00 4.63 R
3709 4782 1.034838 GCCCCAATACGGCATCAACA 61.035 55.000 0.00 0.0 46.27 3.33 R
3927 5655 0.321122 AGCAGCGAGAAGAAACCCTG 60.321 55.000 0.00 0.0 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.042686 TGCTGCTCTCTCTCTCTCTC 57.957 55.000 0.00 0.00 0.00 3.20
20 21 1.561076 TGCTGCTCTCTCTCTCTCTCT 59.439 52.381 0.00 0.00 0.00 3.10
21 22 1.945394 GCTGCTCTCTCTCTCTCTCTG 59.055 57.143 0.00 0.00 0.00 3.35
22 23 1.945394 CTGCTCTCTCTCTCTCTCTGC 59.055 57.143 0.00 0.00 0.00 4.26
23 24 1.312815 GCTCTCTCTCTCTCTCTGCC 58.687 60.000 0.00 0.00 0.00 4.85
24 25 1.133976 GCTCTCTCTCTCTCTCTGCCT 60.134 57.143 0.00 0.00 0.00 4.75
25 26 2.104792 GCTCTCTCTCTCTCTCTGCCTA 59.895 54.545 0.00 0.00 0.00 3.93
26 27 3.805108 GCTCTCTCTCTCTCTCTGCCTAG 60.805 56.522 0.00 0.00 0.00 3.02
27 28 3.384168 TCTCTCTCTCTCTCTGCCTAGT 58.616 50.000 0.00 0.00 0.00 2.57
28 29 3.134623 TCTCTCTCTCTCTCTGCCTAGTG 59.865 52.174 0.00 0.00 0.00 2.74
29 30 1.949525 CTCTCTCTCTCTGCCTAGTGC 59.050 57.143 0.00 0.00 41.77 4.40
30 31 1.563879 TCTCTCTCTCTGCCTAGTGCT 59.436 52.381 5.06 0.00 42.00 4.40
31 32 2.774809 TCTCTCTCTCTGCCTAGTGCTA 59.225 50.000 5.06 0.00 42.00 3.49
32 33 3.201045 TCTCTCTCTCTGCCTAGTGCTAA 59.799 47.826 5.06 0.00 42.00 3.09
33 34 3.951037 CTCTCTCTCTGCCTAGTGCTAAA 59.049 47.826 5.06 0.00 42.00 1.85
34 35 4.541705 TCTCTCTCTGCCTAGTGCTAAAT 58.458 43.478 5.06 0.00 42.00 1.40
35 36 4.959210 TCTCTCTCTGCCTAGTGCTAAATT 59.041 41.667 5.06 0.00 42.00 1.82
36 37 5.423610 TCTCTCTCTGCCTAGTGCTAAATTT 59.576 40.000 0.00 0.00 42.00 1.82
37 38 6.054860 TCTCTCTGCCTAGTGCTAAATTTT 57.945 37.500 0.00 0.00 42.00 1.82
38 39 6.476378 TCTCTCTGCCTAGTGCTAAATTTTT 58.524 36.000 0.00 0.00 42.00 1.94
39 40 7.620880 TCTCTCTGCCTAGTGCTAAATTTTTA 58.379 34.615 0.00 0.00 42.00 1.52
40 41 7.549488 TCTCTCTGCCTAGTGCTAAATTTTTAC 59.451 37.037 0.00 0.00 42.00 2.01
41 42 6.312918 TCTCTGCCTAGTGCTAAATTTTTACG 59.687 38.462 0.00 0.00 42.00 3.18
42 43 5.353123 TCTGCCTAGTGCTAAATTTTTACGG 59.647 40.000 0.00 0.00 42.00 4.02
43 44 5.005094 TGCCTAGTGCTAAATTTTTACGGT 58.995 37.500 0.00 0.00 42.00 4.83
44 45 5.474189 TGCCTAGTGCTAAATTTTTACGGTT 59.526 36.000 0.00 0.00 42.00 4.44
45 46 6.654161 TGCCTAGTGCTAAATTTTTACGGTTA 59.346 34.615 0.00 0.00 42.00 2.85
46 47 7.148373 TGCCTAGTGCTAAATTTTTACGGTTAG 60.148 37.037 0.00 0.00 42.00 2.34
47 48 7.184779 CCTAGTGCTAAATTTTTACGGTTAGC 58.815 38.462 0.00 7.20 45.59 3.09
53 54 8.289440 GCTAAATTTTTACGGTTAGCAAAACT 57.711 30.769 8.90 0.00 45.01 2.66
54 55 8.757789 GCTAAATTTTTACGGTTAGCAAAACTT 58.242 29.630 8.90 0.00 45.01 2.66
57 58 7.862741 ATTTTTACGGTTAGCAAAACTTAGC 57.137 32.000 2.48 0.00 0.00 3.09
58 59 6.622833 TTTTACGGTTAGCAAAACTTAGCT 57.377 33.333 0.00 0.00 44.55 3.32
59 60 6.622833 TTTACGGTTAGCAAAACTTAGCTT 57.377 33.333 0.00 0.00 42.05 3.74
60 61 4.483476 ACGGTTAGCAAAACTTAGCTTG 57.517 40.909 0.00 0.00 42.05 4.01
61 62 3.881089 ACGGTTAGCAAAACTTAGCTTGT 59.119 39.130 0.00 0.00 42.05 3.16
62 63 4.337274 ACGGTTAGCAAAACTTAGCTTGTT 59.663 37.500 0.00 0.00 42.05 2.83
63 64 5.163591 ACGGTTAGCAAAACTTAGCTTGTTT 60.164 36.000 10.50 10.50 42.05 2.83
64 65 5.398416 CGGTTAGCAAAACTTAGCTTGTTTC 59.602 40.000 14.91 6.75 42.05 2.78
65 66 6.504398 GGTTAGCAAAACTTAGCTTGTTTCT 58.496 36.000 14.91 11.92 42.05 2.52
66 67 6.978659 GGTTAGCAAAACTTAGCTTGTTTCTT 59.021 34.615 14.91 8.50 42.05 2.52
67 68 7.491372 GGTTAGCAAAACTTAGCTTGTTTCTTT 59.509 33.333 14.91 8.26 42.05 2.52
68 69 9.511144 GTTAGCAAAACTTAGCTTGTTTCTTTA 57.489 29.630 14.91 7.57 42.05 1.85
70 71 8.996024 AGCAAAACTTAGCTTGTTTCTTTAAA 57.004 26.923 14.91 0.00 38.01 1.52
71 72 9.087424 AGCAAAACTTAGCTTGTTTCTTTAAAG 57.913 29.630 9.04 9.04 38.01 1.85
72 73 8.328146 GCAAAACTTAGCTTGTTTCTTTAAAGG 58.672 33.333 15.13 0.00 36.72 3.11
73 74 9.366216 CAAAACTTAGCTTGTTTCTTTAAAGGT 57.634 29.630 15.13 0.00 36.72 3.50
74 75 9.582431 AAAACTTAGCTTGTTTCTTTAAAGGTC 57.418 29.630 15.13 6.78 36.72 3.85
75 76 7.875327 ACTTAGCTTGTTTCTTTAAAGGTCA 57.125 32.000 15.13 9.04 33.88 4.02
76 77 7.931275 ACTTAGCTTGTTTCTTTAAAGGTCAG 58.069 34.615 15.13 6.04 33.88 3.51
77 78 7.773690 ACTTAGCTTGTTTCTTTAAAGGTCAGA 59.226 33.333 15.13 0.00 33.88 3.27
78 79 8.691661 TTAGCTTGTTTCTTTAAAGGTCAGAT 57.308 30.769 15.13 6.19 33.88 2.90
79 80 7.208225 AGCTTGTTTCTTTAAAGGTCAGATC 57.792 36.000 15.13 1.48 0.00 2.75
80 81 7.001073 AGCTTGTTTCTTTAAAGGTCAGATCT 58.999 34.615 15.13 0.00 0.00 2.75
81 82 7.040823 AGCTTGTTTCTTTAAAGGTCAGATCTG 60.041 37.037 17.07 17.07 0.00 2.90
82 83 7.041098 GCTTGTTTCTTTAAAGGTCAGATCTGA 60.041 37.037 21.67 21.67 37.24 3.27
83 84 8.924511 TTGTTTCTTTAAAGGTCAGATCTGAT 57.075 30.769 27.51 14.53 42.18 2.90
84 85 8.553459 TGTTTCTTTAAAGGTCAGATCTGATC 57.447 34.615 27.51 26.63 42.18 2.92
91 92 3.749665 GGTCAGATCTGATCTTGGGAG 57.250 52.381 27.51 6.53 42.18 4.30
92 93 3.303938 GGTCAGATCTGATCTTGGGAGA 58.696 50.000 27.51 8.72 42.18 3.71
93 94 3.708631 GGTCAGATCTGATCTTGGGAGAA 59.291 47.826 27.51 0.00 42.18 2.87
94 95 4.442753 GGTCAGATCTGATCTTGGGAGAAC 60.443 50.000 27.51 10.27 42.18 3.01
95 96 4.161189 GTCAGATCTGATCTTGGGAGAACA 59.839 45.833 27.51 0.00 42.18 3.18
96 97 4.779489 TCAGATCTGATCTTGGGAGAACAA 59.221 41.667 21.67 0.00 37.58 2.83
97 98 5.427806 TCAGATCTGATCTTGGGAGAACAAT 59.572 40.000 21.67 0.00 37.58 2.71
98 99 6.069789 TCAGATCTGATCTTGGGAGAACAATT 60.070 38.462 21.67 0.00 37.58 2.32
99 100 6.602406 CAGATCTGATCTTGGGAGAACAATTT 59.398 38.462 18.34 0.00 37.58 1.82
100 101 7.122353 CAGATCTGATCTTGGGAGAACAATTTT 59.878 37.037 18.34 0.00 37.58 1.82
101 102 8.331740 AGATCTGATCTTGGGAGAACAATTTTA 58.668 33.333 14.31 0.00 35.76 1.52
102 103 9.129532 GATCTGATCTTGGGAGAACAATTTTAT 57.870 33.333 10.37 0.00 34.73 1.40
103 104 8.884124 TCTGATCTTGGGAGAACAATTTTATT 57.116 30.769 0.00 0.00 34.73 1.40
104 105 8.742777 TCTGATCTTGGGAGAACAATTTTATTG 58.257 33.333 0.00 0.00 34.73 1.90
105 106 7.322664 TGATCTTGGGAGAACAATTTTATTGC 58.677 34.615 0.00 0.00 32.48 3.56
106 107 6.662865 TCTTGGGAGAACAATTTTATTGCA 57.337 33.333 0.00 0.00 0.00 4.08
107 108 6.690530 TCTTGGGAGAACAATTTTATTGCAG 58.309 36.000 0.00 0.00 0.00 4.41
108 109 6.267471 TCTTGGGAGAACAATTTTATTGCAGT 59.733 34.615 0.00 0.00 0.00 4.40
109 110 6.418057 TGGGAGAACAATTTTATTGCAGTT 57.582 33.333 0.00 0.00 0.00 3.16
110 111 6.454795 TGGGAGAACAATTTTATTGCAGTTC 58.545 36.000 3.68 3.68 36.52 3.01
111 112 5.869344 GGGAGAACAATTTTATTGCAGTTCC 59.131 40.000 7.38 2.98 36.84 3.62
112 113 6.454795 GGAGAACAATTTTATTGCAGTTCCA 58.545 36.000 7.38 0.00 36.84 3.53
113 114 6.366061 GGAGAACAATTTTATTGCAGTTCCAC 59.634 38.462 7.38 3.70 36.84 4.02
114 115 7.054491 AGAACAATTTTATTGCAGTTCCACT 57.946 32.000 7.38 0.00 36.84 4.00
115 116 7.147976 AGAACAATTTTATTGCAGTTCCACTC 58.852 34.615 7.38 0.00 36.84 3.51
116 117 5.460646 ACAATTTTATTGCAGTTCCACTCG 58.539 37.500 0.00 0.00 0.00 4.18
117 118 5.009610 ACAATTTTATTGCAGTTCCACTCGT 59.990 36.000 0.00 0.00 0.00 4.18
118 119 6.205853 ACAATTTTATTGCAGTTCCACTCGTA 59.794 34.615 0.00 0.00 0.00 3.43
119 120 5.600908 TTTTATTGCAGTTCCACTCGTAC 57.399 39.130 0.00 0.00 0.00 3.67
120 121 1.710013 ATTGCAGTTCCACTCGTACG 58.290 50.000 9.53 9.53 0.00 3.67
121 122 0.386476 TTGCAGTTCCACTCGTACGT 59.614 50.000 16.05 0.00 0.00 3.57
122 123 0.039798 TGCAGTTCCACTCGTACGTC 60.040 55.000 16.05 0.00 0.00 4.34
123 124 1.063951 GCAGTTCCACTCGTACGTCG 61.064 60.000 16.05 10.25 41.41 5.12
124 125 1.063951 CAGTTCCACTCGTACGTCGC 61.064 60.000 16.05 0.44 39.67 5.19
125 126 1.799121 GTTCCACTCGTACGTCGCC 60.799 63.158 16.05 0.00 39.67 5.54
126 127 2.260154 TTCCACTCGTACGTCGCCA 61.260 57.895 16.05 0.00 39.67 5.69
127 128 1.794151 TTCCACTCGTACGTCGCCAA 61.794 55.000 16.05 1.57 39.67 4.52
128 129 1.372004 CCACTCGTACGTCGCCAAA 60.372 57.895 16.05 0.00 39.67 3.28
129 130 1.611592 CCACTCGTACGTCGCCAAAC 61.612 60.000 16.05 0.00 39.67 2.93
130 131 1.372128 ACTCGTACGTCGCCAAACC 60.372 57.895 16.05 0.00 39.67 3.27
131 132 1.372004 CTCGTACGTCGCCAAACCA 60.372 57.895 16.05 0.00 39.67 3.67
132 133 1.342082 CTCGTACGTCGCCAAACCAG 61.342 60.000 16.05 0.00 39.67 4.00
133 134 2.858158 GTACGTCGCCAAACCAGC 59.142 61.111 0.00 0.00 0.00 4.85
134 135 1.957186 GTACGTCGCCAAACCAGCA 60.957 57.895 0.00 0.00 0.00 4.41
135 136 1.666553 TACGTCGCCAAACCAGCAG 60.667 57.895 0.00 0.00 0.00 4.24
136 137 4.389576 CGTCGCCAAACCAGCAGC 62.390 66.667 0.00 0.00 0.00 5.25
137 138 4.043200 GTCGCCAAACCAGCAGCC 62.043 66.667 0.00 0.00 0.00 4.85
138 139 4.577677 TCGCCAAACCAGCAGCCA 62.578 61.111 0.00 0.00 0.00 4.75
139 140 4.347453 CGCCAAACCAGCAGCCAC 62.347 66.667 0.00 0.00 0.00 5.01
140 141 3.225798 GCCAAACCAGCAGCCACA 61.226 61.111 0.00 0.00 0.00 4.17
141 142 2.795110 GCCAAACCAGCAGCCACAA 61.795 57.895 0.00 0.00 0.00 3.33
142 143 2.051941 CCAAACCAGCAGCCACAAT 58.948 52.632 0.00 0.00 0.00 2.71
143 144 0.320073 CCAAACCAGCAGCCACAATG 60.320 55.000 0.00 0.00 0.00 2.82
144 145 0.675083 CAAACCAGCAGCCACAATGA 59.325 50.000 0.00 0.00 0.00 2.57
145 146 0.675633 AAACCAGCAGCCACAATGAC 59.324 50.000 0.00 0.00 0.00 3.06
146 147 1.518056 AACCAGCAGCCACAATGACG 61.518 55.000 0.00 0.00 0.00 4.35
147 148 2.693762 CCAGCAGCCACAATGACGG 61.694 63.158 0.00 0.00 0.00 4.79
148 149 1.968017 CAGCAGCCACAATGACGGT 60.968 57.895 0.00 0.00 0.00 4.83
149 150 1.672356 AGCAGCCACAATGACGGTC 60.672 57.895 0.00 0.00 0.00 4.79
150 151 1.965930 GCAGCCACAATGACGGTCA 60.966 57.895 14.01 14.01 0.00 4.02
151 152 1.514678 GCAGCCACAATGACGGTCAA 61.515 55.000 15.72 0.00 0.00 3.18
152 153 1.167851 CAGCCACAATGACGGTCAAT 58.832 50.000 15.72 3.47 0.00 2.57
153 154 1.131126 CAGCCACAATGACGGTCAATC 59.869 52.381 15.72 0.00 0.00 2.67
154 155 1.164411 GCCACAATGACGGTCAATCA 58.836 50.000 15.72 0.00 0.00 2.57
155 156 1.131126 GCCACAATGACGGTCAATCAG 59.869 52.381 15.72 7.78 0.00 2.90
156 157 2.698803 CCACAATGACGGTCAATCAGA 58.301 47.619 15.72 0.00 0.00 3.27
157 158 3.273434 CCACAATGACGGTCAATCAGAT 58.727 45.455 15.72 0.00 0.00 2.90
158 159 3.310774 CCACAATGACGGTCAATCAGATC 59.689 47.826 15.72 0.00 0.00 2.75
159 160 3.310774 CACAATGACGGTCAATCAGATCC 59.689 47.826 15.72 0.00 0.00 3.36
160 161 3.055167 ACAATGACGGTCAATCAGATCCA 60.055 43.478 15.72 0.00 0.00 3.41
161 162 4.132336 CAATGACGGTCAATCAGATCCAT 58.868 43.478 15.72 0.00 0.00 3.41
162 163 3.183793 TGACGGTCAATCAGATCCATG 57.816 47.619 8.68 0.00 0.00 3.66
163 164 2.158914 TGACGGTCAATCAGATCCATGG 60.159 50.000 8.68 4.97 0.00 3.66
164 165 1.839994 ACGGTCAATCAGATCCATGGT 59.160 47.619 12.58 0.00 0.00 3.55
165 166 2.216046 CGGTCAATCAGATCCATGGTG 58.784 52.381 12.58 2.68 0.00 4.17
166 167 2.579873 GGTCAATCAGATCCATGGTGG 58.420 52.381 12.58 0.00 39.43 4.61
167 168 1.952296 GTCAATCAGATCCATGGTGGC 59.048 52.381 12.58 0.00 37.47 5.01
168 169 1.848388 TCAATCAGATCCATGGTGGCT 59.152 47.619 12.58 4.79 37.47 4.75
169 170 3.047857 TCAATCAGATCCATGGTGGCTA 58.952 45.455 12.58 0.00 37.47 3.93
170 171 3.072038 TCAATCAGATCCATGGTGGCTAG 59.928 47.826 12.58 0.00 37.47 3.42
171 172 0.761187 TCAGATCCATGGTGGCTAGC 59.239 55.000 12.58 6.04 37.47 3.42
172 173 0.763652 CAGATCCATGGTGGCTAGCT 59.236 55.000 15.72 0.00 37.47 3.32
173 174 0.763652 AGATCCATGGTGGCTAGCTG 59.236 55.000 15.72 4.18 37.47 4.24
174 175 0.250640 GATCCATGGTGGCTAGCTGG 60.251 60.000 15.72 13.95 37.47 4.85
175 176 1.713005 ATCCATGGTGGCTAGCTGGG 61.713 60.000 15.72 7.50 37.47 4.45
176 177 2.683465 CCATGGTGGCTAGCTGGGT 61.683 63.158 15.72 0.00 0.00 4.51
177 178 1.304282 CATGGTGGCTAGCTGGGTT 59.696 57.895 15.72 0.00 0.00 4.11
178 179 0.749454 CATGGTGGCTAGCTGGGTTC 60.749 60.000 15.72 0.00 0.00 3.62
179 180 1.207488 ATGGTGGCTAGCTGGGTTCA 61.207 55.000 15.72 0.00 0.00 3.18
180 181 1.078143 GGTGGCTAGCTGGGTTCAG 60.078 63.158 15.72 0.00 43.64 3.02
181 182 1.553690 GGTGGCTAGCTGGGTTCAGA 61.554 60.000 15.72 0.00 43.49 3.27
182 183 0.543749 GTGGCTAGCTGGGTTCAGAT 59.456 55.000 15.72 0.00 43.49 2.90
183 184 0.543277 TGGCTAGCTGGGTTCAGATG 59.457 55.000 15.72 0.00 43.49 2.90
184 185 0.543749 GGCTAGCTGGGTTCAGATGT 59.456 55.000 15.72 0.00 43.49 3.06
185 186 1.661341 GCTAGCTGGGTTCAGATGTG 58.339 55.000 7.70 0.00 43.49 3.21
186 187 1.065854 GCTAGCTGGGTTCAGATGTGT 60.066 52.381 7.70 0.00 43.49 3.72
187 188 2.898705 CTAGCTGGGTTCAGATGTGTC 58.101 52.381 0.00 0.00 43.49 3.67
188 189 1.059098 AGCTGGGTTCAGATGTGTCA 58.941 50.000 0.00 0.00 43.49 3.58
189 190 1.160137 GCTGGGTTCAGATGTGTCAC 58.840 55.000 0.00 0.00 43.49 3.67
190 191 1.432514 CTGGGTTCAGATGTGTCACG 58.567 55.000 0.00 0.00 43.49 4.35
191 192 0.034756 TGGGTTCAGATGTGTCACGG 59.965 55.000 0.00 0.00 0.00 4.94
192 193 0.673644 GGGTTCAGATGTGTCACGGG 60.674 60.000 0.00 0.00 0.00 5.28
193 194 0.320374 GGTTCAGATGTGTCACGGGA 59.680 55.000 0.00 0.00 0.00 5.14
194 195 1.270625 GGTTCAGATGTGTCACGGGAA 60.271 52.381 0.00 0.00 0.00 3.97
195 196 2.069273 GTTCAGATGTGTCACGGGAAG 58.931 52.381 0.00 0.00 0.00 3.46
196 197 1.338107 TCAGATGTGTCACGGGAAGT 58.662 50.000 0.00 0.00 0.00 3.01
197 198 1.272490 TCAGATGTGTCACGGGAAGTC 59.728 52.381 0.00 0.00 0.00 3.01
198 199 0.243907 AGATGTGTCACGGGAAGTCG 59.756 55.000 0.00 0.00 0.00 4.18
199 200 0.736325 GATGTGTCACGGGAAGTCGG 60.736 60.000 0.00 0.00 0.00 4.79
200 201 1.469335 ATGTGTCACGGGAAGTCGGT 61.469 55.000 0.00 0.00 0.00 4.69
201 202 0.822944 TGTGTCACGGGAAGTCGGTA 60.823 55.000 0.00 0.00 0.00 4.02
202 203 0.314935 GTGTCACGGGAAGTCGGTAA 59.685 55.000 0.00 0.00 0.00 2.85
203 204 1.067354 GTGTCACGGGAAGTCGGTAAT 60.067 52.381 0.00 0.00 0.00 1.89
204 205 1.619827 TGTCACGGGAAGTCGGTAATT 59.380 47.619 0.00 0.00 0.00 1.40
205 206 2.824936 TGTCACGGGAAGTCGGTAATTA 59.175 45.455 0.00 0.00 0.00 1.40
206 207 3.257873 TGTCACGGGAAGTCGGTAATTAA 59.742 43.478 0.00 0.00 0.00 1.40
207 208 4.081531 TGTCACGGGAAGTCGGTAATTAAT 60.082 41.667 0.00 0.00 0.00 1.40
208 209 5.126869 TGTCACGGGAAGTCGGTAATTAATA 59.873 40.000 0.00 0.00 0.00 0.98
209 210 5.460091 GTCACGGGAAGTCGGTAATTAATAC 59.540 44.000 0.00 0.00 0.00 1.89
210 211 5.360714 TCACGGGAAGTCGGTAATTAATACT 59.639 40.000 0.00 0.00 34.74 2.12
211 212 5.689068 CACGGGAAGTCGGTAATTAATACTC 59.311 44.000 0.00 0.00 34.74 2.59
212 213 5.595952 ACGGGAAGTCGGTAATTAATACTCT 59.404 40.000 0.00 0.00 34.74 3.24
213 214 6.148264 CGGGAAGTCGGTAATTAATACTCTC 58.852 44.000 0.00 0.00 34.74 3.20
214 215 6.016443 CGGGAAGTCGGTAATTAATACTCTCT 60.016 42.308 0.00 0.00 34.74 3.10
215 216 7.369607 GGGAAGTCGGTAATTAATACTCTCTC 58.630 42.308 0.00 0.00 34.74 3.20
216 217 7.369607 GGAAGTCGGTAATTAATACTCTCTCC 58.630 42.308 0.00 0.00 34.74 3.71
217 218 7.014038 GGAAGTCGGTAATTAATACTCTCTCCA 59.986 40.741 0.00 0.00 34.74 3.86
218 219 8.480133 AAGTCGGTAATTAATACTCTCTCCAT 57.520 34.615 0.00 0.00 34.74 3.41
219 220 8.113173 AGTCGGTAATTAATACTCTCTCCATC 57.887 38.462 0.00 0.00 34.74 3.51
220 221 7.177041 AGTCGGTAATTAATACTCTCTCCATCC 59.823 40.741 0.00 0.00 34.74 3.51
221 222 6.436532 TCGGTAATTAATACTCTCTCCATCCC 59.563 42.308 0.00 0.00 34.74 3.85
222 223 6.210784 CGGTAATTAATACTCTCTCCATCCCA 59.789 42.308 0.00 0.00 34.74 4.37
223 224 7.093289 CGGTAATTAATACTCTCTCCATCCCAT 60.093 40.741 0.00 0.00 34.74 4.00
224 225 9.268282 GGTAATTAATACTCTCTCCATCCCATA 57.732 37.037 0.00 0.00 34.74 2.74
233 234 8.837099 ACTCTCTCCATCCCATAATATAAGAG 57.163 38.462 0.00 0.00 33.36 2.85
234 235 7.344352 ACTCTCTCCATCCCATAATATAAGAGC 59.656 40.741 0.00 0.00 30.91 4.09
235 236 6.322456 TCTCTCCATCCCATAATATAAGAGCG 59.678 42.308 0.00 0.00 0.00 5.03
236 237 5.958380 TCTCCATCCCATAATATAAGAGCGT 59.042 40.000 0.00 0.00 0.00 5.07
237 238 6.440647 TCTCCATCCCATAATATAAGAGCGTT 59.559 38.462 0.00 0.00 0.00 4.84
238 239 7.016153 TCCATCCCATAATATAAGAGCGTTT 57.984 36.000 0.00 0.00 0.00 3.60
239 240 7.458397 TCCATCCCATAATATAAGAGCGTTTT 58.542 34.615 0.00 0.00 0.00 2.43
240 241 7.942341 TCCATCCCATAATATAAGAGCGTTTTT 59.058 33.333 0.00 0.00 0.00 1.94
241 242 8.023128 CCATCCCATAATATAAGAGCGTTTTTG 58.977 37.037 0.00 0.00 0.00 2.44
242 243 8.783093 CATCCCATAATATAAGAGCGTTTTTGA 58.217 33.333 0.00 0.00 0.00 2.69
243 244 8.149973 TCCCATAATATAAGAGCGTTTTTGAC 57.850 34.615 0.00 0.00 0.00 3.18
244 245 7.771361 TCCCATAATATAAGAGCGTTTTTGACA 59.229 33.333 0.00 0.00 0.00 3.58
245 246 7.855904 CCCATAATATAAGAGCGTTTTTGACAC 59.144 37.037 0.00 0.00 0.00 3.67
246 247 8.612619 CCATAATATAAGAGCGTTTTTGACACT 58.387 33.333 0.00 0.00 0.00 3.55
247 248 9.988350 CATAATATAAGAGCGTTTTTGACACTT 57.012 29.630 0.00 0.00 0.00 3.16
248 249 9.988350 ATAATATAAGAGCGTTTTTGACACTTG 57.012 29.630 0.00 0.00 0.00 3.16
249 250 5.751243 ATAAGAGCGTTTTTGACACTTGT 57.249 34.783 0.00 0.00 0.00 3.16
250 251 3.405170 AGAGCGTTTTTGACACTTGTG 57.595 42.857 0.00 0.00 0.00 3.33
251 252 1.846175 GAGCGTTTTTGACACTTGTGC 59.154 47.619 0.10 0.00 0.00 4.57
252 253 0.920664 GCGTTTTTGACACTTGTGCC 59.079 50.000 0.10 0.00 0.00 5.01
253 254 1.469079 GCGTTTTTGACACTTGTGCCT 60.469 47.619 0.10 0.00 0.00 4.75
254 255 2.184448 CGTTTTTGACACTTGTGCCTG 58.816 47.619 0.10 0.00 0.00 4.85
255 256 1.926510 GTTTTTGACACTTGTGCCTGC 59.073 47.619 0.10 0.00 0.00 4.85
256 257 1.180907 TTTTGACACTTGTGCCTGCA 58.819 45.000 0.10 0.00 0.00 4.41
257 258 0.455410 TTTGACACTTGTGCCTGCAC 59.545 50.000 15.15 15.15 46.33 4.57
258 259 0.394216 TTGACACTTGTGCCTGCACT 60.394 50.000 21.62 2.34 46.30 4.40
259 260 0.467804 TGACACTTGTGCCTGCACTA 59.532 50.000 21.62 14.08 46.30 2.74
262 263 3.171987 CTTGTGCCTGCACTAGCG 58.828 61.111 21.62 1.75 46.30 4.26
263 264 1.669115 CTTGTGCCTGCACTAGCGT 60.669 57.895 21.62 0.00 46.30 5.07
264 265 1.630244 CTTGTGCCTGCACTAGCGTC 61.630 60.000 21.62 0.00 46.30 5.19
265 266 2.048222 GTGCCTGCACTAGCGTCA 60.048 61.111 14.77 0.00 46.23 4.35
266 267 1.667830 GTGCCTGCACTAGCGTCAA 60.668 57.895 14.77 0.00 46.23 3.18
267 268 1.070615 TGCCTGCACTAGCGTCAAA 59.929 52.632 0.00 0.00 46.23 2.69
268 269 0.533978 TGCCTGCACTAGCGTCAAAA 60.534 50.000 0.00 0.00 46.23 2.44
269 270 0.591170 GCCTGCACTAGCGTCAAAAA 59.409 50.000 0.00 0.00 46.23 1.94
270 271 1.663161 GCCTGCACTAGCGTCAAAAAC 60.663 52.381 0.00 0.00 46.23 2.43
271 272 1.601903 CCTGCACTAGCGTCAAAAACA 59.398 47.619 0.00 0.00 46.23 2.83
272 273 2.602217 CCTGCACTAGCGTCAAAAACAC 60.602 50.000 0.00 0.00 46.23 3.32
273 274 2.285083 TGCACTAGCGTCAAAAACACT 58.715 42.857 0.00 0.00 46.23 3.55
274 275 3.459145 TGCACTAGCGTCAAAAACACTA 58.541 40.909 0.00 0.00 46.23 2.74
275 276 4.062293 TGCACTAGCGTCAAAAACACTAT 58.938 39.130 0.00 0.00 46.23 2.12
276 277 4.084066 TGCACTAGCGTCAAAAACACTATG 60.084 41.667 0.00 0.00 46.23 2.23
277 278 4.669197 GCACTAGCGTCAAAAACACTATGG 60.669 45.833 0.00 0.00 0.00 2.74
278 279 4.000988 ACTAGCGTCAAAAACACTATGGG 58.999 43.478 0.00 0.00 0.00 4.00
279 280 3.134574 AGCGTCAAAAACACTATGGGA 57.865 42.857 0.00 0.00 0.00 4.37
280 281 2.812011 AGCGTCAAAAACACTATGGGAC 59.188 45.455 0.00 0.00 0.00 4.46
304 305 6.369005 CAGAACGAGTAGTTATGTATACGGG 58.631 44.000 2.92 0.00 44.53 5.28
305 306 6.017605 CAGAACGAGTAGTTATGTATACGGGT 60.018 42.308 2.92 0.00 44.53 5.28
306 307 7.171508 CAGAACGAGTAGTTATGTATACGGGTA 59.828 40.741 2.92 0.00 44.53 3.69
307 308 6.787085 ACGAGTAGTTATGTATACGGGTAC 57.213 41.667 0.00 0.00 0.00 3.34
308 309 6.204882 AACGAGTAGTTATGTATACGGGTACC 59.795 42.308 2.17 2.17 44.03 3.34
309 310 7.905681 AACGAGTAGTTATGTATACGGGTACCT 60.906 40.741 12.72 0.00 44.96 3.08
327 328 7.404139 GGTACCTCATGTATATTCGTGAAAC 57.596 40.000 4.06 4.91 33.72 2.78
328 329 6.423001 GGTACCTCATGTATATTCGTGAAACC 59.577 42.308 4.06 9.11 33.72 3.27
329 330 6.235231 ACCTCATGTATATTCGTGAAACCT 57.765 37.500 5.83 0.00 33.72 3.50
330 331 6.650120 ACCTCATGTATATTCGTGAAACCTT 58.350 36.000 5.83 0.00 33.72 3.50
331 332 7.110155 ACCTCATGTATATTCGTGAAACCTTT 58.890 34.615 5.83 0.00 33.72 3.11
332 333 7.610305 ACCTCATGTATATTCGTGAAACCTTTT 59.390 33.333 5.83 0.00 33.72 2.27
333 334 8.458843 CCTCATGTATATTCGTGAAACCTTTTT 58.541 33.333 5.83 0.00 33.72 1.94
334 335 9.490663 CTCATGTATATTCGTGAAACCTTTTTC 57.509 33.333 5.83 0.00 41.49 2.29
335 336 9.226606 TCATGTATATTCGTGAAACCTTTTTCT 57.773 29.630 2.04 0.00 41.64 2.52
336 337 9.840427 CATGTATATTCGTGAAACCTTTTTCTT 57.160 29.630 0.00 0.00 41.64 2.52
340 341 8.965986 ATATTCGTGAAACCTTTTTCTTAAGC 57.034 30.769 0.00 0.00 41.64 3.09
341 342 5.821516 TCGTGAAACCTTTTTCTTAAGCA 57.178 34.783 0.00 0.00 41.64 3.91
342 343 5.575019 TCGTGAAACCTTTTTCTTAAGCAC 58.425 37.500 0.00 0.00 41.64 4.40
343 344 5.124138 TCGTGAAACCTTTTTCTTAAGCACA 59.876 36.000 0.00 0.00 41.64 4.57
344 345 5.229260 CGTGAAACCTTTTTCTTAAGCACAC 59.771 40.000 0.00 0.00 41.64 3.82
345 346 5.229260 GTGAAACCTTTTTCTTAAGCACACG 59.771 40.000 0.00 0.00 41.64 4.49
346 347 3.349488 ACCTTTTTCTTAAGCACACGC 57.651 42.857 0.00 0.00 38.99 5.34
347 348 5.959346 GAAACCTTTTTCTTAAGCACACGCT 60.959 40.000 0.00 0.00 43.46 5.07
349 350 8.782825 GAAACCTTTTTCTTAAGCACACGCTTT 61.783 37.037 4.85 0.00 45.35 3.51
358 359 1.746760 GCACACGCTTTGAAGTCTTG 58.253 50.000 0.00 0.00 34.30 3.02
359 360 1.330521 GCACACGCTTTGAAGTCTTGA 59.669 47.619 0.00 0.00 34.30 3.02
360 361 2.031682 GCACACGCTTTGAAGTCTTGAT 60.032 45.455 0.00 0.00 34.30 2.57
361 362 3.548587 CACACGCTTTGAAGTCTTGATG 58.451 45.455 0.00 0.00 0.00 3.07
362 363 2.031682 ACACGCTTTGAAGTCTTGATGC 60.032 45.455 0.00 0.00 0.00 3.91
363 364 1.537202 ACGCTTTGAAGTCTTGATGCC 59.463 47.619 0.00 0.00 0.00 4.40
364 365 1.808945 CGCTTTGAAGTCTTGATGCCT 59.191 47.619 0.00 0.00 0.00 4.75
365 366 2.227388 CGCTTTGAAGTCTTGATGCCTT 59.773 45.455 0.00 0.00 0.00 4.35
366 367 3.304928 CGCTTTGAAGTCTTGATGCCTTT 60.305 43.478 0.00 0.00 0.00 3.11
367 368 3.985925 GCTTTGAAGTCTTGATGCCTTTG 59.014 43.478 0.00 0.00 0.00 2.77
368 369 4.500375 GCTTTGAAGTCTTGATGCCTTTGT 60.500 41.667 0.00 0.00 0.00 2.83
369 370 5.594926 CTTTGAAGTCTTGATGCCTTTGTT 58.405 37.500 0.00 0.00 0.00 2.83
370 371 4.836125 TGAAGTCTTGATGCCTTTGTTC 57.164 40.909 0.00 0.00 0.00 3.18
371 372 4.206375 TGAAGTCTTGATGCCTTTGTTCA 58.794 39.130 0.00 0.00 0.00 3.18
372 373 4.036734 TGAAGTCTTGATGCCTTTGTTCAC 59.963 41.667 0.00 0.00 0.00 3.18
373 374 3.554934 AGTCTTGATGCCTTTGTTCACA 58.445 40.909 0.00 0.00 0.00 3.58
374 375 4.147321 AGTCTTGATGCCTTTGTTCACAT 58.853 39.130 0.00 0.00 0.00 3.21
375 376 4.022589 AGTCTTGATGCCTTTGTTCACATG 60.023 41.667 0.00 0.00 0.00 3.21
376 377 2.728690 TGATGCCTTTGTTCACATGC 57.271 45.000 0.00 0.00 0.00 4.06
377 378 1.962100 TGATGCCTTTGTTCACATGCA 59.038 42.857 0.00 0.00 32.53 3.96
378 379 2.563620 TGATGCCTTTGTTCACATGCAT 59.436 40.909 10.28 10.28 38.09 3.96
379 380 2.442212 TGCCTTTGTTCACATGCATG 57.558 45.000 25.09 25.09 0.00 4.06
380 381 1.073177 GCCTTTGTTCACATGCATGC 58.927 50.000 26.53 11.82 0.00 4.06
381 382 1.605968 GCCTTTGTTCACATGCATGCA 60.606 47.619 26.53 25.04 0.00 3.96
382 383 2.063266 CCTTTGTTCACATGCATGCAC 58.937 47.619 25.37 19.59 0.00 4.57
383 384 2.063266 CTTTGTTCACATGCATGCACC 58.937 47.619 25.37 12.26 0.00 5.01
384 385 1.330234 TTGTTCACATGCATGCACCT 58.670 45.000 25.37 4.95 0.00 4.00
385 386 2.197283 TGTTCACATGCATGCACCTA 57.803 45.000 25.37 6.12 0.00 3.08
386 387 1.811965 TGTTCACATGCATGCACCTAC 59.188 47.619 25.37 16.46 0.00 3.18
387 388 2.086869 GTTCACATGCATGCACCTACT 58.913 47.619 25.37 3.10 0.00 2.57
388 389 1.741528 TCACATGCATGCACCTACTG 58.258 50.000 25.37 19.32 0.00 2.74
400 401 4.859629 GCACCTACTGCATACTTTGTAC 57.140 45.455 0.00 0.00 46.29 2.90
401 402 4.504858 GCACCTACTGCATACTTTGTACT 58.495 43.478 0.00 0.00 46.29 2.73
402 403 4.935808 GCACCTACTGCATACTTTGTACTT 59.064 41.667 0.00 0.00 46.29 2.24
403 404 5.411669 GCACCTACTGCATACTTTGTACTTT 59.588 40.000 0.00 0.00 46.29 2.66
404 405 6.402226 GCACCTACTGCATACTTTGTACTTTC 60.402 42.308 0.00 0.00 46.29 2.62
405 406 6.092259 CACCTACTGCATACTTTGTACTTTCC 59.908 42.308 0.00 0.00 0.00 3.13
406 407 5.585047 CCTACTGCATACTTTGTACTTTCCC 59.415 44.000 0.00 0.00 0.00 3.97
407 408 4.000988 ACTGCATACTTTGTACTTTCCCG 58.999 43.478 0.00 0.00 0.00 5.14
408 409 3.340034 TGCATACTTTGTACTTTCCCGG 58.660 45.455 0.00 0.00 0.00 5.73
409 410 3.008157 TGCATACTTTGTACTTTCCCGGA 59.992 43.478 0.73 0.00 0.00 5.14
410 411 4.196971 GCATACTTTGTACTTTCCCGGAT 58.803 43.478 0.73 0.00 0.00 4.18
411 412 4.272748 GCATACTTTGTACTTTCCCGGATC 59.727 45.833 0.73 0.00 0.00 3.36
412 413 5.424757 CATACTTTGTACTTTCCCGGATCA 58.575 41.667 0.73 0.00 0.00 2.92
413 414 4.569719 ACTTTGTACTTTCCCGGATCAT 57.430 40.909 0.73 0.00 0.00 2.45
414 415 5.687166 ACTTTGTACTTTCCCGGATCATA 57.313 39.130 0.73 0.00 0.00 2.15
415 416 6.057321 ACTTTGTACTTTCCCGGATCATAA 57.943 37.500 0.73 0.00 0.00 1.90
416 417 6.659824 ACTTTGTACTTTCCCGGATCATAAT 58.340 36.000 0.73 0.00 0.00 1.28
417 418 7.798071 ACTTTGTACTTTCCCGGATCATAATA 58.202 34.615 0.73 0.00 0.00 0.98
418 419 8.437575 ACTTTGTACTTTCCCGGATCATAATAT 58.562 33.333 0.73 0.00 0.00 1.28
419 420 9.938280 CTTTGTACTTTCCCGGATCATAATATA 57.062 33.333 0.73 0.00 0.00 0.86
428 429 8.701908 TCCCGGATCATAATATATACTACACC 57.298 38.462 0.73 0.00 0.00 4.16
429 430 8.508601 TCCCGGATCATAATATATACTACACCT 58.491 37.037 0.73 0.00 0.00 4.00
430 431 8.577296 CCCGGATCATAATATATACTACACCTG 58.423 40.741 0.73 0.00 0.00 4.00
431 432 9.350951 CCGGATCATAATATATACTACACCTGA 57.649 37.037 0.00 0.00 0.00 3.86
434 435 9.666626 GATCATAATATATACTACACCTGACGC 57.333 37.037 0.00 0.00 0.00 5.19
435 436 7.691158 TCATAATATATACTACACCTGACGCG 58.309 38.462 3.53 3.53 0.00 6.01
436 437 5.954296 AATATATACTACACCTGACGCGT 57.046 39.130 13.85 13.85 0.00 6.01
437 438 3.892918 ATATACTACACCTGACGCGTC 57.107 47.619 31.66 31.66 0.00 5.19
438 439 1.456296 ATACTACACCTGACGCGTCA 58.544 50.000 36.96 36.96 38.06 4.35
439 440 1.237533 TACTACACCTGACGCGTCAA 58.762 50.000 38.11 24.21 39.39 3.18
440 441 0.039437 ACTACACCTGACGCGTCAAG 60.039 55.000 38.11 34.41 39.39 3.02
441 442 0.039437 CTACACCTGACGCGTCAAGT 60.039 55.000 38.11 35.08 39.39 3.16
442 443 3.234390 CACCTGACGCGTCAAGTG 58.766 61.111 40.57 40.57 43.11 3.16
443 444 2.661866 ACCTGACGCGTCAAGTGC 60.662 61.111 35.57 14.11 39.39 4.40
444 445 3.414700 CCTGACGCGTCAAGTGCC 61.415 66.667 38.11 13.97 39.39 5.01
445 446 2.661537 CTGACGCGTCAAGTGCCA 60.662 61.111 38.11 17.87 39.39 4.92
446 447 2.943345 CTGACGCGTCAAGTGCCAC 61.943 63.158 38.11 12.45 39.39 5.01
447 448 2.661866 GACGCGTCAAGTGCCACT 60.662 61.111 33.09 0.00 0.00 4.00
448 449 2.203015 ACGCGTCAAGTGCCACTT 60.203 55.556 5.58 3.74 39.39 3.16
478 479 7.162082 ACTTGAGGTCGTCTTTTGAAGATTAT 58.838 34.615 0.00 0.00 40.18 1.28
479 480 7.332182 ACTTGAGGTCGTCTTTTGAAGATTATC 59.668 37.037 0.00 0.00 40.18 1.75
480 481 5.805486 TGAGGTCGTCTTTTGAAGATTATCG 59.195 40.000 0.00 0.00 40.18 2.92
481 482 5.962433 AGGTCGTCTTTTGAAGATTATCGA 58.038 37.500 0.00 0.00 40.18 3.59
482 483 5.805994 AGGTCGTCTTTTGAAGATTATCGAC 59.194 40.000 16.57 16.57 45.13 4.20
483 484 6.022217 GTCGTCTTTTGAAGATTATCGACC 57.978 41.667 15.07 4.27 42.55 4.79
484 485 4.796830 TCGTCTTTTGAAGATTATCGACCG 59.203 41.667 0.00 0.00 40.18 4.79
485 486 4.026804 CGTCTTTTGAAGATTATCGACCGG 60.027 45.833 0.00 0.00 40.18 5.28
486 487 5.107133 GTCTTTTGAAGATTATCGACCGGA 58.893 41.667 9.46 0.00 40.18 5.14
487 488 5.753921 GTCTTTTGAAGATTATCGACCGGAT 59.246 40.000 9.46 0.00 40.18 4.18
490 491 7.982919 TCTTTTGAAGATTATCGACCGGATTAA 59.017 33.333 9.46 0.18 32.71 1.40
492 493 6.401047 TGAAGATTATCGACCGGATTAAGT 57.599 37.500 9.46 0.00 36.55 2.24
493 494 6.812998 TGAAGATTATCGACCGGATTAAGTT 58.187 36.000 9.46 0.00 36.55 2.66
494 495 7.944061 TGAAGATTATCGACCGGATTAAGTTA 58.056 34.615 9.46 0.00 36.55 2.24
495 496 8.415553 TGAAGATTATCGACCGGATTAAGTTAA 58.584 33.333 9.46 0.00 36.55 2.01
496 497 8.585189 AAGATTATCGACCGGATTAAGTTAAC 57.415 34.615 9.46 0.00 36.55 2.01
497 498 7.949434 AGATTATCGACCGGATTAAGTTAACT 58.051 34.615 9.46 1.12 36.55 2.24
498 499 9.071276 AGATTATCGACCGGATTAAGTTAACTA 57.929 33.333 9.46 0.00 36.55 2.24
499 500 9.339492 GATTATCGACCGGATTAAGTTAACTAG 57.661 37.037 9.46 0.00 36.55 2.57
500 501 5.505173 TCGACCGGATTAAGTTAACTAGG 57.495 43.478 9.46 8.28 0.00 3.02
501 502 5.192927 TCGACCGGATTAAGTTAACTAGGA 58.807 41.667 9.46 0.00 0.00 2.94
508 509 2.674796 AAGTTAACTAGGAGCGGCAG 57.325 50.000 8.92 0.00 0.00 4.85
533 534 4.974721 CCGCCCCAAAGTGCACCT 62.975 66.667 14.63 0.00 0.00 4.00
541 542 2.244651 AAAGTGCACCTGACGCGTC 61.245 57.895 31.66 31.66 0.00 5.19
542 543 2.916502 AAAGTGCACCTGACGCGTCA 62.917 55.000 36.96 36.96 38.06 4.35
554 555 1.082756 CGCGTCAAGAACAAGTGGC 60.083 57.895 0.00 0.00 0.00 5.01
556 557 1.444119 GCGTCAAGAACAAGTGGCCA 61.444 55.000 0.00 0.00 0.00 5.36
585 586 3.567164 GTGGGATCAATAATGCACCTCTG 59.433 47.826 0.00 0.00 0.00 3.35
951 958 0.388649 AACCACAGCTCATCGTCGAC 60.389 55.000 5.18 5.18 0.00 4.20
953 960 1.869574 CACAGCTCATCGTCGACGG 60.870 63.158 35.05 21.47 40.29 4.79
966 973 1.719780 GTCGACGGTAAGCTGTTCTTG 59.280 52.381 0.00 0.00 36.25 3.02
977 984 1.736681 GCTGTTCTTGCATCCAGAGAC 59.263 52.381 6.61 1.35 0.00 3.36
993 1004 4.141287 CAGAGACCAGTGTAGCTAGCTAT 58.859 47.826 26.59 10.30 0.00 2.97
1215 1226 3.691820 TGACGAGGTCAGGGATCTT 57.308 52.632 0.00 0.00 37.67 2.40
1271 1282 4.208686 GCGTGTCGAGGGCCCTAG 62.209 72.222 28.78 26.77 0.00 3.02
1386 1397 3.504863 CGCCATCAAGGAAATCAACAAG 58.495 45.455 0.00 0.00 41.22 3.16
1435 1446 2.584143 GGTGCGTACCCGATTCCG 60.584 66.667 12.25 0.00 41.36 4.30
1436 1447 2.491152 GTGCGTACCCGATTCCGA 59.509 61.111 0.00 0.00 38.22 4.55
1437 1448 1.066918 GTGCGTACCCGATTCCGAT 59.933 57.895 0.00 0.00 38.22 4.18
1438 1449 0.529119 GTGCGTACCCGATTCCGATT 60.529 55.000 0.00 0.00 38.22 3.34
1455 1467 2.678324 GATTGACGGACCTAGCTATGC 58.322 52.381 0.00 0.00 0.00 3.14
1459 1471 2.159099 TGACGGACCTAGCTATGCTTTG 60.159 50.000 0.00 0.00 40.44 2.77
1460 1472 1.139058 ACGGACCTAGCTATGCTTTGG 59.861 52.381 0.00 3.87 40.44 3.28
1461 1473 1.139058 CGGACCTAGCTATGCTTTGGT 59.861 52.381 13.65 13.65 43.14 3.67
1464 1476 2.356069 GACCTAGCTATGCTTTGGTTGC 59.644 50.000 14.49 4.11 41.57 4.17
1466 1478 1.331756 CTAGCTATGCTTTGGTTGCCG 59.668 52.381 0.00 0.00 40.44 5.69
1467 1479 0.322456 AGCTATGCTTTGGTTGCCGA 60.322 50.000 0.00 0.00 33.89 5.54
1468 1480 0.740737 GCTATGCTTTGGTTGCCGAT 59.259 50.000 0.00 0.00 0.00 4.18
1470 1482 2.801063 CTATGCTTTGGTTGCCGATTG 58.199 47.619 0.00 0.00 0.00 2.67
1472 1484 1.112315 TGCTTTGGTTGCCGATTGGT 61.112 50.000 0.00 0.00 37.67 3.67
1482 1497 1.621317 TGCCGATTGGTCAGTGACTTA 59.379 47.619 22.18 11.18 37.67 2.24
1483 1498 2.236146 TGCCGATTGGTCAGTGACTTAT 59.764 45.455 22.18 15.15 37.67 1.73
1504 1519 2.554291 TTCGTGGAGGGAGAGGGGA 61.554 63.158 0.00 0.00 0.00 4.81
1505 1520 2.443016 CGTGGAGGGAGAGGGGAG 60.443 72.222 0.00 0.00 0.00 4.30
1515 1530 0.955905 GAGAGGGGAGTAGACATCGC 59.044 60.000 0.00 0.00 0.00 4.58
1519 1534 1.327690 GGGGAGTAGACATCGCCACA 61.328 60.000 4.35 0.00 46.28 4.17
1520 1535 0.753262 GGGAGTAGACATCGCCACAT 59.247 55.000 0.00 0.00 0.00 3.21
1521 1536 1.269831 GGGAGTAGACATCGCCACATC 60.270 57.143 0.00 0.00 0.00 3.06
1522 1537 1.600663 GGAGTAGACATCGCCACATCG 60.601 57.143 0.00 0.00 0.00 3.84
1523 1538 0.385751 AGTAGACATCGCCACATCGG 59.614 55.000 0.00 0.00 38.11 4.18
1544 1559 5.542635 TCGGGGCATGTACTTCTATTTAGAT 59.457 40.000 0.00 0.00 31.40 1.98
1546 1561 6.518369 CGGGGCATGTACTTCTATTTAGATCA 60.518 42.308 0.00 0.00 31.40 2.92
1547 1562 7.224297 GGGGCATGTACTTCTATTTAGATCAA 58.776 38.462 0.00 0.00 31.40 2.57
1606 1621 0.033504 CCACTCGCAGGTACACAGTT 59.966 55.000 0.00 0.00 0.00 3.16
1616 1631 7.045416 TCGCAGGTACACAGTTGATAATATTT 58.955 34.615 0.00 0.00 0.00 1.40
1630 1645 7.667043 TGATAATATTTTGCCTAAGCCTACG 57.333 36.000 0.00 0.00 38.69 3.51
1690 1705 4.770795 ACACTGAAGTTACAGAGCTTGTT 58.229 39.130 6.82 0.00 41.29 2.83
1732 1747 7.126421 AGGGATCAAGAGCTTCTCAAGTTATTA 59.874 37.037 0.00 0.00 32.06 0.98
1733 1748 7.440856 GGGATCAAGAGCTTCTCAAGTTATTAG 59.559 40.741 0.00 0.00 32.06 1.73
1795 1810 0.108804 TCTCTGTCGTTGGATTCGGC 60.109 55.000 0.00 0.00 0.00 5.54
1816 1831 1.457346 GATTGGGCAAGACCACTCTG 58.543 55.000 5.14 0.00 41.03 3.35
1874 1889 1.475403 TTCACGGGCTTTTGTTCCAA 58.525 45.000 0.00 0.00 0.00 3.53
1999 2014 4.056092 ACTTATCGAAGAAATCCGGGAC 57.944 45.455 0.00 0.00 43.58 4.46
2047 2062 2.808543 CCTCAGCCAGTTACAGTCAAAC 59.191 50.000 0.00 0.00 0.00 2.93
2059 2074 2.158813 ACAGTCAAACGTTCCTGGTGAT 60.159 45.455 20.09 3.76 0.00 3.06
2063 2078 1.197721 CAAACGTTCCTGGTGATGAGC 59.802 52.381 0.00 0.00 0.00 4.26
2064 2079 0.687354 AACGTTCCTGGTGATGAGCT 59.313 50.000 0.00 0.00 0.00 4.09
2065 2080 0.687354 ACGTTCCTGGTGATGAGCTT 59.313 50.000 0.00 0.00 0.00 3.74
2066 2081 1.072331 ACGTTCCTGGTGATGAGCTTT 59.928 47.619 0.00 0.00 0.00 3.51
2099 2114 3.491267 GCATCCTATCGAAGCAGTTACAC 59.509 47.826 0.00 0.00 35.24 2.90
2100 2115 4.737946 GCATCCTATCGAAGCAGTTACACT 60.738 45.833 0.00 0.00 35.24 3.55
2101 2116 4.634184 TCCTATCGAAGCAGTTACACTC 57.366 45.455 0.00 0.00 0.00 3.51
2102 2117 4.014406 TCCTATCGAAGCAGTTACACTCA 58.986 43.478 0.00 0.00 0.00 3.41
2103 2118 4.461431 TCCTATCGAAGCAGTTACACTCAA 59.539 41.667 0.00 0.00 0.00 3.02
2106 2121 4.990543 TCGAAGCAGTTACACTCAAATG 57.009 40.909 0.00 0.00 0.00 2.32
2107 2122 4.627058 TCGAAGCAGTTACACTCAAATGA 58.373 39.130 0.00 0.00 0.00 2.57
2108 2123 4.447724 TCGAAGCAGTTACACTCAAATGAC 59.552 41.667 0.00 0.00 0.00 3.06
2109 2124 4.377431 CGAAGCAGTTACACTCAAATGACC 60.377 45.833 0.00 0.00 0.00 4.02
2110 2125 3.067106 AGCAGTTACACTCAAATGACCG 58.933 45.455 0.00 0.00 0.00 4.79
2111 2126 3.064207 GCAGTTACACTCAAATGACCGA 58.936 45.455 0.00 0.00 0.00 4.69
2112 2127 3.684788 GCAGTTACACTCAAATGACCGAT 59.315 43.478 0.00 0.00 0.00 4.18
2114 2129 5.350365 GCAGTTACACTCAAATGACCGATTA 59.650 40.000 0.00 0.00 0.00 1.75
2115 2130 6.128391 GCAGTTACACTCAAATGACCGATTAA 60.128 38.462 0.00 0.00 0.00 1.40
2116 2131 7.234384 CAGTTACACTCAAATGACCGATTAAC 58.766 38.462 0.00 0.00 0.00 2.01
2117 2132 7.117812 CAGTTACACTCAAATGACCGATTAACT 59.882 37.037 0.00 0.00 0.00 2.24
2118 2133 8.308931 AGTTACACTCAAATGACCGATTAACTA 58.691 33.333 0.00 0.00 0.00 2.24
2119 2134 8.592998 GTTACACTCAAATGACCGATTAACTAG 58.407 37.037 0.00 0.00 0.00 2.57
2120 2135 6.698380 ACACTCAAATGACCGATTAACTAGT 58.302 36.000 0.00 0.00 0.00 2.57
2121 2136 7.833786 ACACTCAAATGACCGATTAACTAGTA 58.166 34.615 0.00 0.00 0.00 1.82
2122 2137 7.758528 ACACTCAAATGACCGATTAACTAGTAC 59.241 37.037 0.00 0.00 0.00 2.73
2133 2148 7.140048 CCGATTAACTAGTACTAGAAGGCTTG 58.860 42.308 31.93 16.58 36.97 4.01
2141 2156 8.501070 ACTAGTACTAGAAGGCTTGGAATACTA 58.499 37.037 31.93 10.48 36.97 1.82
2147 2162 1.348036 AGGCTTGGAATACTATCCGCC 59.652 52.381 4.62 4.62 42.88 6.13
2168 2269 4.023707 GCCGCTAGTATGCATCTTTTCAAT 60.024 41.667 0.19 0.00 0.00 2.57
2170 2271 6.293407 GCCGCTAGTATGCATCTTTTCAATTA 60.293 38.462 0.19 0.00 0.00 1.40
2259 2774 3.244561 TGTTCTGTTGGAGGAGGATGTTC 60.245 47.826 0.00 0.00 0.00 3.18
2272 2787 8.841300 GGAGGAGGATGTTCATTATTAACTTTC 58.159 37.037 0.00 0.00 0.00 2.62
2287 2802 0.394565 CTTTCCTATGGGCTCTCGGG 59.605 60.000 0.00 0.00 0.00 5.14
2386 3005 7.118680 TGCACTTTTTCGGTTAACTAGGAATAG 59.881 37.037 5.42 8.16 0.00 1.73
2387 3006 7.118825 GCACTTTTTCGGTTAACTAGGAATAGT 59.881 37.037 5.42 8.70 0.00 2.12
2398 3445 5.957771 ACTAGGAATAGTTCATTGGCAGA 57.042 39.130 0.00 0.00 0.00 4.26
2401 3448 5.121380 AGGAATAGTTCATTGGCAGACAT 57.879 39.130 0.00 0.00 0.00 3.06
2407 3454 4.197750 AGTTCATTGGCAGACATCAGATC 58.802 43.478 0.00 0.00 0.00 2.75
2443 3490 5.000591 CCCATTTGGTTATTTGGTTTGACC 58.999 41.667 0.00 0.00 39.22 4.02
2447 3494 7.041440 CCATTTGGTTATTTGGTTTGACCTTTC 60.041 37.037 0.00 0.00 39.58 2.62
2467 3522 8.251721 ACCTTTCGGATAGATATAGTGCATTAC 58.748 37.037 0.00 0.00 0.00 1.89
2515 3584 3.121279 GTGACTACATGTGTGTTGCTACG 59.879 47.826 9.11 0.00 39.77 3.51
2545 3614 8.345565 CACCCATCTGTTACTAATTTATGCTTC 58.654 37.037 0.00 0.00 0.00 3.86
2546 3615 7.502561 ACCCATCTGTTACTAATTTATGCTTCC 59.497 37.037 0.00 0.00 0.00 3.46
2712 3784 5.179182 TGTGTATGTCATATGGCGCTTTATG 59.821 40.000 18.22 18.22 0.00 1.90
2748 3820 8.780846 ATGTGTGCATCAACATTTCATTAATT 57.219 26.923 6.77 0.00 31.49 1.40
2858 3930 7.337938 TCTAATATGAACAATCTTGGCAGTCA 58.662 34.615 0.00 0.00 0.00 3.41
2860 3932 3.213206 TGAACAATCTTGGCAGTCACT 57.787 42.857 0.00 0.00 0.00 3.41
2889 3961 4.326278 ACGACAACTCGCATATTTAGTGTG 59.674 41.667 0.00 0.00 44.33 3.82
3029 4101 7.894364 TCCTAGTGAACTTAAGGAAGTGTCTAT 59.106 37.037 7.53 0.00 45.50 1.98
3168 4240 1.404315 GGGCGTGGACTTACAGAAGAG 60.404 57.143 0.00 0.00 36.45 2.85
3286 4358 7.170277 TCCAGAAGATCATGAGATTGACAAAA 58.830 34.615 0.09 0.00 33.72 2.44
3336 4408 5.503683 CGAAAATTTTGTGCAGCATGGAAAA 60.504 36.000 8.47 5.43 39.09 2.29
3466 4539 2.684374 GTGCATGACATGGTGCTTGATA 59.316 45.455 17.03 0.00 41.78 2.15
3526 4599 8.739039 TGACAATATTGGAAAGTAACAAGGATG 58.261 33.333 19.37 0.00 0.00 3.51
3540 4613 5.140747 ACAAGGATGTGACTAGTTCTCAC 57.859 43.478 0.00 1.17 38.69 3.51
3556 4629 6.797454 AGTTCTCACAGAAATATCCGTAGAC 58.203 40.000 0.00 0.00 35.75 2.59
3567 4640 7.827236 AGAAATATCCGTAGACTATCTCTCCAG 59.173 40.741 0.00 0.00 0.00 3.86
3572 4645 6.465948 TCCGTAGACTATCTCTCCAGAATAC 58.534 44.000 0.00 0.00 30.24 1.89
3573 4646 5.644636 CCGTAGACTATCTCTCCAGAATACC 59.355 48.000 0.00 0.00 30.24 2.73
3589 4662 5.521735 CAGAATACCGAGGAAGATCAACAAG 59.478 44.000 0.00 0.00 0.00 3.16
3592 4665 2.005451 CCGAGGAAGATCAACAAGCTG 58.995 52.381 0.00 0.00 0.00 4.24
3603 4676 1.467734 CAACAAGCTGCACCTCTCATC 59.532 52.381 1.02 0.00 0.00 2.92
3613 4686 4.338012 TGCACCTCTCATCAATTCAATGT 58.662 39.130 0.00 0.00 0.00 2.71
3638 4711 5.698741 ATATCACAAGTGAGGTCCATCAA 57.301 39.130 8.99 0.00 43.61 2.57
3709 4782 5.007921 GGTGTTTTACGTGTATTGGACTTGT 59.992 40.000 0.00 0.00 0.00 3.16
3712 4785 6.093771 TGTTTTACGTGTATTGGACTTGTGTT 59.906 34.615 0.00 0.00 0.00 3.32
3796 4869 5.127356 CACCTGAGGTACCTAGGTCTAAAAG 59.873 48.000 27.22 17.33 42.72 2.27
3797 4870 5.016031 ACCTGAGGTACCTAGGTCTAAAAGA 59.984 44.000 25.59 0.00 40.73 2.52
3801 4874 6.212187 TGAGGTACCTAGGTCTAAAAGAAACC 59.788 42.308 20.32 16.71 0.00 3.27
3816 4889 4.457834 AGAAACCGGTATCTCTGAACTG 57.542 45.455 8.00 0.00 0.00 3.16
3844 4917 9.454859 CAGAGGAAATAGGAAATCTACAGTTTT 57.545 33.333 0.00 0.00 0.00 2.43
3852 4925 7.112452 AGGAAATCTACAGTTTTTGCAAGTT 57.888 32.000 0.00 0.00 0.00 2.66
3865 4938 9.529325 AGTTTTTGCAAGTTTTAGATTTAGGAC 57.471 29.630 0.00 0.00 0.00 3.85
3866 4939 8.476925 GTTTTTGCAAGTTTTAGATTTAGGACG 58.523 33.333 0.00 0.00 0.00 4.79
3867 4940 5.291293 TGCAAGTTTTAGATTTAGGACGC 57.709 39.130 0.00 0.00 0.00 5.19
3868 4941 4.757657 TGCAAGTTTTAGATTTAGGACGCA 59.242 37.500 0.00 0.00 0.00 5.24
3869 4942 5.086727 GCAAGTTTTAGATTTAGGACGCAC 58.913 41.667 0.00 0.00 0.00 5.34
3870 4943 5.106673 GCAAGTTTTAGATTTAGGACGCACT 60.107 40.000 0.00 0.00 0.00 4.40
3871 4944 6.091713 GCAAGTTTTAGATTTAGGACGCACTA 59.908 38.462 0.00 0.00 0.00 2.74
3872 4945 7.360607 GCAAGTTTTAGATTTAGGACGCACTAA 60.361 37.037 0.00 0.00 0.00 2.24
3876 5604 8.827677 GTTTTAGATTTAGGACGCACTAATGAT 58.172 33.333 0.90 0.00 33.31 2.45
3883 5611 5.127693 AGGACGCACTAATGATATGAGAC 57.872 43.478 0.00 0.00 0.00 3.36
3884 5612 4.584743 AGGACGCACTAATGATATGAGACA 59.415 41.667 0.00 0.00 0.00 3.41
3891 5619 6.016860 GCACTAATGATATGAGACATTTGCCA 60.017 38.462 0.00 0.00 35.77 4.92
3910 5638 3.999663 GCCATCATCTATGTGGAAGCTAC 59.000 47.826 12.76 0.00 33.59 3.58
3911 5639 4.503817 GCCATCATCTATGTGGAAGCTACA 60.504 45.833 12.76 0.00 33.59 2.74
3927 5655 7.094377 TGGAAGCTACAAAAGTTAATGGTCATC 60.094 37.037 0.00 0.00 0.00 2.92
3929 5657 7.383102 AGCTACAAAAGTTAATGGTCATCAG 57.617 36.000 0.00 0.00 0.00 2.90
3935 5663 6.590234 AAAGTTAATGGTCATCAGGGTTTC 57.410 37.500 0.00 0.00 0.00 2.78
3936 5664 5.520748 AGTTAATGGTCATCAGGGTTTCT 57.479 39.130 0.00 0.00 0.00 2.52
3938 5666 5.946377 AGTTAATGGTCATCAGGGTTTCTTC 59.054 40.000 0.00 0.00 0.00 2.87
3963 5691 0.254747 GCTATTGGCACCCTGGTGTA 59.745 55.000 17.19 4.94 46.90 2.90
4020 5748 1.007964 CTATGCCTCTCCGAGCACG 60.008 63.158 0.00 0.00 42.84 5.34
4036 5764 2.670934 CGGTGCAAGAGCTTGGCT 60.671 61.111 11.78 0.00 43.88 4.75
4037 5765 2.263741 CGGTGCAAGAGCTTGGCTT 61.264 57.895 11.78 0.00 39.88 4.35
4072 5800 4.220821 TGAGGAAGCTCGACATTTACTTCT 59.779 41.667 0.00 0.00 37.49 2.85
4118 5846 9.268282 AGAGGAAACTTTTGTGGAGACTATATA 57.732 33.333 0.00 0.00 44.43 0.86
4135 5863 9.259832 AGACTATATACAACCTGCATGATATCA 57.740 33.333 8.10 8.10 0.00 2.15
4136 5864 9.526713 GACTATATACAACCTGCATGATATCAG 57.473 37.037 11.78 4.86 0.00 2.90
4144 5872 6.095432 ACCTGCATGATATCAGAAGTCTAC 57.905 41.667 11.78 0.00 32.26 2.59
4150 5878 7.809806 TGCATGATATCAGAAGTCTACGTATTG 59.190 37.037 11.78 0.58 0.00 1.90
4213 5942 1.303282 GAACCCCCTCGATGCCTTT 59.697 57.895 0.00 0.00 0.00 3.11
4253 5982 1.001746 AGACCATATCGCATGCTCTGG 59.998 52.381 17.13 17.54 0.00 3.86
4306 6035 6.013032 CCCCTCACATCTATCAAACCTATCAT 60.013 42.308 0.00 0.00 0.00 2.45
4319 6048 8.593492 TCAAACCTATCATCGTTTCATATCAG 57.407 34.615 0.00 0.00 29.85 2.90
4369 6098 0.486879 AATCCTTGGGAGGTTGCCAA 59.513 50.000 2.06 2.06 45.90 4.52
4390 6119 3.300388 ACTCTTCGCCATCTCTGGATAA 58.700 45.455 0.00 0.00 46.37 1.75
4408 6137 0.975040 AAGCAGCACCCACCAAACAA 60.975 50.000 0.00 0.00 0.00 2.83
4481 6210 0.901114 ATGCATTGTGAGCCAGCCAA 60.901 50.000 0.00 0.00 0.00 4.52
4506 6235 3.391296 AGGTAGTCTTTCAACAAGGAGCA 59.609 43.478 0.00 0.00 0.00 4.26
4533 6262 5.737063 GCCAAATGCAGAATATGTCCGATTT 60.737 40.000 0.00 0.00 40.77 2.17
4567 6296 0.890683 GGTGGCCAAAGAAGATGGTG 59.109 55.000 7.24 0.00 40.23 4.17
4591 6320 1.446907 CGATCTGTTTGAGCTTGGCT 58.553 50.000 0.00 0.00 43.88 4.75
4615 6344 4.195225 GGTAACCTTCTCTCACTTCAGG 57.805 50.000 0.00 0.00 0.00 3.86
4619 6348 1.277557 CCTTCTCTCACTTCAGGGTGG 59.722 57.143 0.00 0.00 37.75 4.61
4683 6432 1.136147 GCCGCAGTGAGAAATGCAG 59.864 57.895 0.00 0.00 42.68 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.945394 CAGAGAGAGAGAGAGAGCAGC 59.055 57.143 0.00 0.00 0.00 5.25
2 3 1.945394 GCAGAGAGAGAGAGAGAGCAG 59.055 57.143 0.00 0.00 0.00 4.24
3 4 1.408683 GGCAGAGAGAGAGAGAGAGCA 60.409 57.143 0.00 0.00 0.00 4.26
4 5 1.133976 AGGCAGAGAGAGAGAGAGAGC 60.134 57.143 0.00 0.00 0.00 4.09
5 6 3.389329 ACTAGGCAGAGAGAGAGAGAGAG 59.611 52.174 0.00 0.00 0.00 3.20
6 7 3.134623 CACTAGGCAGAGAGAGAGAGAGA 59.865 52.174 0.00 0.00 0.00 3.10
7 8 3.470709 CACTAGGCAGAGAGAGAGAGAG 58.529 54.545 0.00 0.00 0.00 3.20
8 9 2.421388 GCACTAGGCAGAGAGAGAGAGA 60.421 54.545 0.00 0.00 43.97 3.10
9 10 1.949525 GCACTAGGCAGAGAGAGAGAG 59.050 57.143 0.00 0.00 43.97 3.20
10 11 2.051334 GCACTAGGCAGAGAGAGAGA 57.949 55.000 0.00 0.00 43.97 3.10
21 22 5.556355 ACCGTAAAAATTTAGCACTAGGC 57.444 39.130 0.00 0.00 45.30 3.93
22 23 7.184779 GCTAACCGTAAAAATTTAGCACTAGG 58.815 38.462 7.20 0.00 43.88 3.02
28 29 8.289440 AGTTTTGCTAACCGTAAAAATTTAGC 57.711 30.769 5.44 5.44 44.44 3.09
31 32 8.757789 GCTAAGTTTTGCTAACCGTAAAAATTT 58.242 29.630 6.34 0.00 40.72 1.82
32 33 8.139350 AGCTAAGTTTTGCTAACCGTAAAAATT 58.861 29.630 0.00 6.30 43.94 1.82
33 34 7.654568 AGCTAAGTTTTGCTAACCGTAAAAAT 58.345 30.769 0.00 0.00 38.61 1.82
34 35 7.030075 AGCTAAGTTTTGCTAACCGTAAAAA 57.970 32.000 0.00 0.00 38.61 1.94
35 36 6.622833 AGCTAAGTTTTGCTAACCGTAAAA 57.377 33.333 0.00 0.00 37.49 1.52
36 37 6.038492 ACAAGCTAAGTTTTGCTAACCGTAAA 59.962 34.615 1.44 0.00 38.27 2.01
37 38 5.528320 ACAAGCTAAGTTTTGCTAACCGTAA 59.472 36.000 1.44 0.00 38.27 3.18
38 39 5.058490 ACAAGCTAAGTTTTGCTAACCGTA 58.942 37.500 1.44 0.00 38.27 4.02
39 40 3.881089 ACAAGCTAAGTTTTGCTAACCGT 59.119 39.130 1.44 0.00 38.27 4.83
40 41 4.483476 ACAAGCTAAGTTTTGCTAACCG 57.517 40.909 1.44 0.00 38.27 4.44
41 42 6.504398 AGAAACAAGCTAAGTTTTGCTAACC 58.496 36.000 15.74 4.66 39.15 2.85
42 43 7.987268 AAGAAACAAGCTAAGTTTTGCTAAC 57.013 32.000 15.74 5.21 39.15 2.34
45 46 8.996024 TTTAAAGAAACAAGCTAAGTTTTGCT 57.004 26.923 15.74 8.61 39.15 3.91
46 47 8.328146 CCTTTAAAGAAACAAGCTAAGTTTTGC 58.672 33.333 16.98 6.88 39.15 3.68
47 48 9.366216 ACCTTTAAAGAAACAAGCTAAGTTTTG 57.634 29.630 16.98 0.00 39.15 2.44
48 49 9.582431 GACCTTTAAAGAAACAAGCTAAGTTTT 57.418 29.630 16.98 5.89 39.15 2.43
49 50 8.745590 TGACCTTTAAAGAAACAAGCTAAGTTT 58.254 29.630 16.98 14.85 41.53 2.66
50 51 8.288689 TGACCTTTAAAGAAACAAGCTAAGTT 57.711 30.769 16.98 0.00 0.00 2.66
51 52 7.773690 TCTGACCTTTAAAGAAACAAGCTAAGT 59.226 33.333 16.98 1.18 0.00 2.24
52 53 8.154649 TCTGACCTTTAAAGAAACAAGCTAAG 57.845 34.615 16.98 0.00 0.00 2.18
53 54 8.691661 ATCTGACCTTTAAAGAAACAAGCTAA 57.308 30.769 16.98 0.00 0.00 3.09
54 55 8.157476 AGATCTGACCTTTAAAGAAACAAGCTA 58.843 33.333 16.98 1.50 0.00 3.32
55 56 7.001073 AGATCTGACCTTTAAAGAAACAAGCT 58.999 34.615 16.98 4.60 0.00 3.74
56 57 7.041098 TCAGATCTGACCTTTAAAGAAACAAGC 60.041 37.037 21.67 2.43 34.14 4.01
57 58 8.383318 TCAGATCTGACCTTTAAAGAAACAAG 57.617 34.615 21.67 6.85 34.14 3.16
58 59 8.924511 ATCAGATCTGACCTTTAAAGAAACAA 57.075 30.769 27.37 0.00 43.11 2.83
59 60 8.378565 AGATCAGATCTGACCTTTAAAGAAACA 58.621 33.333 27.37 11.54 43.11 2.83
60 61 8.785329 AGATCAGATCTGACCTTTAAAGAAAC 57.215 34.615 27.37 7.82 43.11 2.78
61 62 9.224267 CAAGATCAGATCTGACCTTTAAAGAAA 57.776 33.333 27.02 2.08 40.43 2.52
62 63 7.826252 CCAAGATCAGATCTGACCTTTAAAGAA 59.174 37.037 27.02 2.29 40.43 2.52
63 64 7.334090 CCAAGATCAGATCTGACCTTTAAAGA 58.666 38.462 27.02 2.82 40.43 2.52
64 65 6.541641 CCCAAGATCAGATCTGACCTTTAAAG 59.458 42.308 27.02 16.56 40.43 1.85
65 66 6.215431 TCCCAAGATCAGATCTGACCTTTAAA 59.785 38.462 27.02 13.61 40.43 1.52
66 67 5.726308 TCCCAAGATCAGATCTGACCTTTAA 59.274 40.000 27.02 13.94 40.43 1.52
67 68 5.280499 TCCCAAGATCAGATCTGACCTTTA 58.720 41.667 27.02 14.26 40.43 1.85
68 69 4.107072 TCCCAAGATCAGATCTGACCTTT 58.893 43.478 27.02 17.99 40.43 3.11
69 70 3.710677 CTCCCAAGATCAGATCTGACCTT 59.289 47.826 24.44 24.44 44.00 3.50
70 71 3.052262 TCTCCCAAGATCAGATCTGACCT 60.052 47.826 27.37 21.17 43.11 3.85
71 72 3.303938 TCTCCCAAGATCAGATCTGACC 58.696 50.000 27.37 18.94 43.11 4.02
72 73 4.161189 TGTTCTCCCAAGATCAGATCTGAC 59.839 45.833 27.37 19.57 43.11 3.51
73 74 4.356436 TGTTCTCCCAAGATCAGATCTGA 58.644 43.478 27.03 27.03 44.59 3.27
74 75 4.750021 TGTTCTCCCAAGATCAGATCTG 57.250 45.455 17.07 17.07 40.13 2.90
75 76 5.972327 ATTGTTCTCCCAAGATCAGATCT 57.028 39.130 7.15 7.15 42.61 2.75
76 77 7.401955 AAAATTGTTCTCCCAAGATCAGATC 57.598 36.000 1.64 1.64 33.78 2.75
77 78 9.484806 AATAAAATTGTTCTCCCAAGATCAGAT 57.515 29.630 0.00 0.00 33.78 2.90
78 79 8.742777 CAATAAAATTGTTCTCCCAAGATCAGA 58.257 33.333 0.00 0.00 33.78 3.27
79 80 7.490402 GCAATAAAATTGTTCTCCCAAGATCAG 59.510 37.037 0.00 0.00 33.78 2.90
80 81 7.039152 TGCAATAAAATTGTTCTCCCAAGATCA 60.039 33.333 0.00 0.00 30.96 2.92
81 82 7.322664 TGCAATAAAATTGTTCTCCCAAGATC 58.677 34.615 1.94 0.00 0.00 2.75
82 83 7.038799 ACTGCAATAAAATTGTTCTCCCAAGAT 60.039 33.333 1.94 0.00 0.00 2.40
83 84 6.267471 ACTGCAATAAAATTGTTCTCCCAAGA 59.733 34.615 1.94 0.00 0.00 3.02
84 85 6.458210 ACTGCAATAAAATTGTTCTCCCAAG 58.542 36.000 1.94 0.00 0.00 3.61
85 86 6.418057 ACTGCAATAAAATTGTTCTCCCAA 57.582 33.333 1.94 0.00 0.00 4.12
86 87 6.418057 AACTGCAATAAAATTGTTCTCCCA 57.582 33.333 1.94 0.00 0.00 4.37
87 88 5.869344 GGAACTGCAATAAAATTGTTCTCCC 59.131 40.000 10.01 0.00 35.52 4.30
88 89 6.366061 GTGGAACTGCAATAAAATTGTTCTCC 59.634 38.462 10.01 4.25 35.52 3.71
89 90 7.338440 GTGGAACTGCAATAAAATTGTTCTC 57.662 36.000 10.01 3.34 35.52 2.87
107 108 1.799121 GGCGACGTACGAGTGGAAC 60.799 63.158 24.41 3.60 45.77 3.62
108 109 1.794151 TTGGCGACGTACGAGTGGAA 61.794 55.000 24.41 6.00 45.77 3.53
109 110 1.794151 TTTGGCGACGTACGAGTGGA 61.794 55.000 24.41 0.00 45.77 4.02
110 111 1.372004 TTTGGCGACGTACGAGTGG 60.372 57.895 24.41 8.65 45.77 4.00
111 112 1.611592 GGTTTGGCGACGTACGAGTG 61.612 60.000 24.41 11.80 45.77 3.51
112 113 1.372128 GGTTTGGCGACGTACGAGT 60.372 57.895 24.41 0.00 45.77 4.18
113 114 1.342082 CTGGTTTGGCGACGTACGAG 61.342 60.000 24.41 16.12 45.77 4.18
114 115 1.372004 CTGGTTTGGCGACGTACGA 60.372 57.895 24.41 0.00 45.77 3.43
115 116 3.007070 GCTGGTTTGGCGACGTACG 62.007 63.158 15.01 15.01 45.66 3.67
116 117 1.897398 CTGCTGGTTTGGCGACGTAC 61.897 60.000 0.00 0.00 0.00 3.67
117 118 1.666553 CTGCTGGTTTGGCGACGTA 60.667 57.895 0.00 0.00 0.00 3.57
118 119 2.972505 CTGCTGGTTTGGCGACGT 60.973 61.111 0.00 0.00 0.00 4.34
119 120 4.389576 GCTGCTGGTTTGGCGACG 62.390 66.667 0.00 0.00 0.00 5.12
120 121 4.043200 GGCTGCTGGTTTGGCGAC 62.043 66.667 0.00 0.00 0.00 5.19
121 122 4.577677 TGGCTGCTGGTTTGGCGA 62.578 61.111 0.00 0.00 0.00 5.54
122 123 4.347453 GTGGCTGCTGGTTTGGCG 62.347 66.667 0.00 0.00 0.00 5.69
123 124 2.103339 ATTGTGGCTGCTGGTTTGGC 62.103 55.000 0.00 0.00 0.00 4.52
124 125 0.320073 CATTGTGGCTGCTGGTTTGG 60.320 55.000 0.00 0.00 0.00 3.28
125 126 0.675083 TCATTGTGGCTGCTGGTTTG 59.325 50.000 0.00 0.00 0.00 2.93
126 127 0.675633 GTCATTGTGGCTGCTGGTTT 59.324 50.000 0.00 0.00 0.00 3.27
127 128 1.518056 CGTCATTGTGGCTGCTGGTT 61.518 55.000 0.00 0.00 0.00 3.67
128 129 1.968017 CGTCATTGTGGCTGCTGGT 60.968 57.895 0.00 0.00 0.00 4.00
129 130 2.693762 CCGTCATTGTGGCTGCTGG 61.694 63.158 0.00 0.00 0.00 4.85
130 131 1.915614 GACCGTCATTGTGGCTGCTG 61.916 60.000 0.00 0.00 0.00 4.41
131 132 1.672356 GACCGTCATTGTGGCTGCT 60.672 57.895 0.00 0.00 0.00 4.24
132 133 1.514678 TTGACCGTCATTGTGGCTGC 61.515 55.000 1.09 0.00 0.00 5.25
133 134 1.131126 GATTGACCGTCATTGTGGCTG 59.869 52.381 1.09 0.00 0.00 4.85
134 135 1.271325 TGATTGACCGTCATTGTGGCT 60.271 47.619 1.09 0.00 0.00 4.75
135 136 1.131126 CTGATTGACCGTCATTGTGGC 59.869 52.381 1.09 0.00 0.00 5.01
136 137 2.698803 TCTGATTGACCGTCATTGTGG 58.301 47.619 1.09 0.00 0.00 4.17
137 138 3.310774 GGATCTGATTGACCGTCATTGTG 59.689 47.826 1.09 0.00 0.00 3.33
138 139 3.055167 TGGATCTGATTGACCGTCATTGT 60.055 43.478 1.09 0.00 0.00 2.71
139 140 3.534554 TGGATCTGATTGACCGTCATTG 58.465 45.455 1.09 0.00 0.00 2.82
140 141 3.912496 TGGATCTGATTGACCGTCATT 57.088 42.857 1.09 0.00 0.00 2.57
141 142 3.495629 CCATGGATCTGATTGACCGTCAT 60.496 47.826 5.56 0.00 0.00 3.06
142 143 2.158914 CCATGGATCTGATTGACCGTCA 60.159 50.000 5.56 0.00 0.00 4.35
143 144 2.158900 ACCATGGATCTGATTGACCGTC 60.159 50.000 21.47 0.00 0.00 4.79
144 145 1.839994 ACCATGGATCTGATTGACCGT 59.160 47.619 21.47 0.00 0.00 4.83
145 146 2.216046 CACCATGGATCTGATTGACCG 58.784 52.381 21.47 0.00 0.00 4.79
146 147 2.579873 CCACCATGGATCTGATTGACC 58.420 52.381 21.47 0.00 40.96 4.02
147 148 1.952296 GCCACCATGGATCTGATTGAC 59.048 52.381 21.47 0.00 40.96 3.18
148 149 1.848388 AGCCACCATGGATCTGATTGA 59.152 47.619 21.47 0.00 40.96 2.57
149 150 2.359981 AGCCACCATGGATCTGATTG 57.640 50.000 21.47 3.74 40.96 2.67
150 151 2.224719 GCTAGCCACCATGGATCTGATT 60.225 50.000 21.47 0.78 40.96 2.57
151 152 1.350351 GCTAGCCACCATGGATCTGAT 59.650 52.381 21.47 4.66 40.96 2.90
152 153 0.761187 GCTAGCCACCATGGATCTGA 59.239 55.000 21.47 0.00 40.96 3.27
153 154 0.763652 AGCTAGCCACCATGGATCTG 59.236 55.000 21.47 6.27 40.96 2.90
154 155 0.763652 CAGCTAGCCACCATGGATCT 59.236 55.000 21.47 13.92 40.96 2.75
155 156 0.250640 CCAGCTAGCCACCATGGATC 60.251 60.000 21.47 6.64 40.96 3.36
156 157 1.713005 CCCAGCTAGCCACCATGGAT 61.713 60.000 21.47 3.68 40.96 3.41
157 158 2.377810 CCCAGCTAGCCACCATGGA 61.378 63.158 21.47 0.00 40.96 3.41
158 159 2.194056 CCCAGCTAGCCACCATGG 59.806 66.667 11.19 11.19 41.55 3.66
159 160 0.749454 GAACCCAGCTAGCCACCATG 60.749 60.000 12.13 2.12 0.00 3.66
160 161 1.207488 TGAACCCAGCTAGCCACCAT 61.207 55.000 12.13 0.00 0.00 3.55
161 162 1.841302 CTGAACCCAGCTAGCCACCA 61.841 60.000 12.13 0.57 33.07 4.17
162 163 1.078143 CTGAACCCAGCTAGCCACC 60.078 63.158 12.13 0.00 33.07 4.61
163 164 0.543749 ATCTGAACCCAGCTAGCCAC 59.456 55.000 12.13 0.00 40.20 5.01
164 165 0.543277 CATCTGAACCCAGCTAGCCA 59.457 55.000 12.13 0.00 40.20 4.75
165 166 0.543749 ACATCTGAACCCAGCTAGCC 59.456 55.000 12.13 0.00 40.20 3.93
166 167 1.065854 ACACATCTGAACCCAGCTAGC 60.066 52.381 6.62 6.62 40.20 3.42
167 168 2.234661 TGACACATCTGAACCCAGCTAG 59.765 50.000 0.00 0.00 40.20 3.42
168 169 2.028112 GTGACACATCTGAACCCAGCTA 60.028 50.000 0.00 0.00 40.20 3.32
169 170 1.059098 TGACACATCTGAACCCAGCT 58.941 50.000 0.00 0.00 40.20 4.24
170 171 1.160137 GTGACACATCTGAACCCAGC 58.840 55.000 0.00 0.00 40.20 4.85
171 172 1.432514 CGTGACACATCTGAACCCAG 58.567 55.000 6.37 0.00 41.74 4.45
172 173 0.034756 CCGTGACACATCTGAACCCA 59.965 55.000 6.37 0.00 0.00 4.51
173 174 0.673644 CCCGTGACACATCTGAACCC 60.674 60.000 6.37 0.00 0.00 4.11
174 175 0.320374 TCCCGTGACACATCTGAACC 59.680 55.000 6.37 0.00 0.00 3.62
175 176 2.069273 CTTCCCGTGACACATCTGAAC 58.931 52.381 6.37 0.00 0.00 3.18
176 177 1.691976 ACTTCCCGTGACACATCTGAA 59.308 47.619 6.37 1.76 0.00 3.02
177 178 1.272490 GACTTCCCGTGACACATCTGA 59.728 52.381 6.37 0.00 0.00 3.27
178 179 1.714794 GACTTCCCGTGACACATCTG 58.285 55.000 6.37 0.00 0.00 2.90
179 180 0.243907 CGACTTCCCGTGACACATCT 59.756 55.000 6.37 0.00 0.00 2.90
180 181 0.736325 CCGACTTCCCGTGACACATC 60.736 60.000 6.37 0.00 0.00 3.06
181 182 1.292223 CCGACTTCCCGTGACACAT 59.708 57.895 6.37 0.00 0.00 3.21
182 183 0.822944 TACCGACTTCCCGTGACACA 60.823 55.000 6.37 0.00 0.00 3.72
183 184 0.314935 TTACCGACTTCCCGTGACAC 59.685 55.000 0.00 0.00 0.00 3.67
184 185 1.259609 ATTACCGACTTCCCGTGACA 58.740 50.000 0.00 0.00 0.00 3.58
185 186 2.375173 AATTACCGACTTCCCGTGAC 57.625 50.000 0.00 0.00 0.00 3.67
186 187 4.741321 ATTAATTACCGACTTCCCGTGA 57.259 40.909 0.00 0.00 0.00 4.35
187 188 5.594926 AGTATTAATTACCGACTTCCCGTG 58.405 41.667 0.00 0.00 0.00 4.94
188 189 5.595952 AGAGTATTAATTACCGACTTCCCGT 59.404 40.000 0.00 0.00 0.00 5.28
189 190 6.016443 AGAGAGTATTAATTACCGACTTCCCG 60.016 42.308 0.00 0.00 0.00 5.14
190 191 7.287512 AGAGAGTATTAATTACCGACTTCCC 57.712 40.000 0.00 0.00 0.00 3.97
191 192 7.014038 TGGAGAGAGTATTAATTACCGACTTCC 59.986 40.741 0.00 0.00 0.00 3.46
192 193 7.938715 TGGAGAGAGTATTAATTACCGACTTC 58.061 38.462 0.00 0.00 0.00 3.01
193 194 7.893124 TGGAGAGAGTATTAATTACCGACTT 57.107 36.000 0.00 0.00 0.00 3.01
194 195 7.177041 GGATGGAGAGAGTATTAATTACCGACT 59.823 40.741 0.00 0.00 0.00 4.18
195 196 7.314393 GGATGGAGAGAGTATTAATTACCGAC 58.686 42.308 0.00 0.00 0.00 4.79
196 197 6.436532 GGGATGGAGAGAGTATTAATTACCGA 59.563 42.308 0.00 0.00 0.00 4.69
197 198 6.210784 TGGGATGGAGAGAGTATTAATTACCG 59.789 42.308 0.00 0.00 0.00 4.02
198 199 7.554959 TGGGATGGAGAGAGTATTAATTACC 57.445 40.000 0.00 0.00 0.00 2.85
207 208 9.928618 CTCTTATATTATGGGATGGAGAGAGTA 57.071 37.037 0.00 0.00 32.02 2.59
208 209 7.344352 GCTCTTATATTATGGGATGGAGAGAGT 59.656 40.741 0.00 0.00 32.02 3.24
209 210 7.469870 CGCTCTTATATTATGGGATGGAGAGAG 60.470 44.444 0.00 0.00 32.02 3.20
210 211 6.322456 CGCTCTTATATTATGGGATGGAGAGA 59.678 42.308 0.00 0.00 32.02 3.10
211 212 6.097554 ACGCTCTTATATTATGGGATGGAGAG 59.902 42.308 0.00 0.00 33.16 3.20
212 213 5.958380 ACGCTCTTATATTATGGGATGGAGA 59.042 40.000 0.00 0.00 0.00 3.71
213 214 6.227298 ACGCTCTTATATTATGGGATGGAG 57.773 41.667 0.00 0.00 0.00 3.86
214 215 6.620877 AACGCTCTTATATTATGGGATGGA 57.379 37.500 0.00 0.00 0.00 3.41
215 216 7.687941 AAAACGCTCTTATATTATGGGATGG 57.312 36.000 0.00 0.00 0.00 3.51
216 217 8.783093 TCAAAAACGCTCTTATATTATGGGATG 58.217 33.333 0.00 0.00 0.00 3.51
217 218 8.784043 GTCAAAAACGCTCTTATATTATGGGAT 58.216 33.333 0.00 0.00 0.00 3.85
218 219 7.771361 TGTCAAAAACGCTCTTATATTATGGGA 59.229 33.333 0.00 0.00 0.00 4.37
219 220 7.855904 GTGTCAAAAACGCTCTTATATTATGGG 59.144 37.037 0.00 0.00 35.42 4.00
220 221 8.612619 AGTGTCAAAAACGCTCTTATATTATGG 58.387 33.333 0.00 0.00 45.69 2.74
233 234 0.920664 GGCACAAGTGTCAAAAACGC 59.079 50.000 0.00 0.00 38.74 4.84
234 235 2.184448 CAGGCACAAGTGTCAAAAACG 58.816 47.619 7.62 0.00 37.73 3.60
235 236 1.926510 GCAGGCACAAGTGTCAAAAAC 59.073 47.619 7.62 0.00 37.73 2.43
236 237 1.547820 TGCAGGCACAAGTGTCAAAAA 59.452 42.857 7.62 0.00 37.73 1.94
237 238 1.135141 GTGCAGGCACAAGTGTCAAAA 60.135 47.619 18.84 0.00 45.53 2.44
238 239 0.455410 GTGCAGGCACAAGTGTCAAA 59.545 50.000 18.84 0.00 45.53 2.69
239 240 2.105984 GTGCAGGCACAAGTGTCAA 58.894 52.632 18.84 0.00 45.53 3.18
240 241 3.826221 GTGCAGGCACAAGTGTCA 58.174 55.556 18.84 0.00 45.53 3.58
248 249 1.227999 TTTGACGCTAGTGCAGGCAC 61.228 55.000 16.29 16.29 46.50 5.01
249 250 0.533978 TTTTGACGCTAGTGCAGGCA 60.534 50.000 2.40 0.00 39.64 4.75
250 251 0.591170 TTTTTGACGCTAGTGCAGGC 59.409 50.000 2.40 0.00 39.64 4.85
251 252 1.601903 TGTTTTTGACGCTAGTGCAGG 59.398 47.619 2.40 0.00 39.64 4.85
252 253 2.287915 AGTGTTTTTGACGCTAGTGCAG 59.712 45.455 2.40 0.00 46.90 4.41
253 254 2.285083 AGTGTTTTTGACGCTAGTGCA 58.715 42.857 2.40 0.00 46.90 4.57
260 261 2.550606 TGTCCCATAGTGTTTTTGACGC 59.449 45.455 0.00 0.00 39.09 5.19
261 262 4.062293 TCTGTCCCATAGTGTTTTTGACG 58.938 43.478 0.00 0.00 0.00 4.35
262 263 5.560183 CGTTCTGTCCCATAGTGTTTTTGAC 60.560 44.000 0.00 0.00 0.00 3.18
263 264 4.513692 CGTTCTGTCCCATAGTGTTTTTGA 59.486 41.667 0.00 0.00 0.00 2.69
264 265 4.513692 TCGTTCTGTCCCATAGTGTTTTTG 59.486 41.667 0.00 0.00 0.00 2.44
265 266 4.710324 TCGTTCTGTCCCATAGTGTTTTT 58.290 39.130 0.00 0.00 0.00 1.94
266 267 4.202326 ACTCGTTCTGTCCCATAGTGTTTT 60.202 41.667 0.00 0.00 0.00 2.43
267 268 3.323979 ACTCGTTCTGTCCCATAGTGTTT 59.676 43.478 0.00 0.00 0.00 2.83
268 269 2.897969 ACTCGTTCTGTCCCATAGTGTT 59.102 45.455 0.00 0.00 0.00 3.32
269 270 2.526432 ACTCGTTCTGTCCCATAGTGT 58.474 47.619 0.00 0.00 0.00 3.55
270 271 3.695060 ACTACTCGTTCTGTCCCATAGTG 59.305 47.826 0.00 0.00 0.00 2.74
271 272 3.965694 ACTACTCGTTCTGTCCCATAGT 58.034 45.455 0.00 0.00 0.00 2.12
272 273 4.985538 AACTACTCGTTCTGTCCCATAG 57.014 45.455 0.00 0.00 0.00 2.23
273 274 5.889853 ACATAACTACTCGTTCTGTCCCATA 59.110 40.000 0.00 0.00 38.18 2.74
274 275 4.710375 ACATAACTACTCGTTCTGTCCCAT 59.290 41.667 0.00 0.00 38.18 4.00
275 276 4.084287 ACATAACTACTCGTTCTGTCCCA 58.916 43.478 0.00 0.00 38.18 4.37
276 277 4.715527 ACATAACTACTCGTTCTGTCCC 57.284 45.455 0.00 0.00 38.18 4.46
277 278 7.068341 CGTATACATAACTACTCGTTCTGTCC 58.932 42.308 3.32 0.00 40.69 4.02
278 279 7.068341 CCGTATACATAACTACTCGTTCTGTC 58.932 42.308 3.32 0.00 40.69 3.51
279 280 6.017605 CCCGTATACATAACTACTCGTTCTGT 60.018 42.308 3.32 0.00 43.03 3.41
280 281 6.017605 ACCCGTATACATAACTACTCGTTCTG 60.018 42.308 3.32 0.00 37.05 3.02
281 282 6.058183 ACCCGTATACATAACTACTCGTTCT 58.942 40.000 3.32 0.00 37.05 3.01
282 283 6.305693 ACCCGTATACATAACTACTCGTTC 57.694 41.667 3.32 0.00 37.05 3.95
283 284 6.204882 GGTACCCGTATACATAACTACTCGTT 59.795 42.308 0.00 0.00 39.64 3.85
284 285 5.701290 GGTACCCGTATACATAACTACTCGT 59.299 44.000 0.00 0.00 0.00 4.18
285 286 5.934625 AGGTACCCGTATACATAACTACTCG 59.065 44.000 8.74 0.00 0.00 4.18
286 287 6.936900 TGAGGTACCCGTATACATAACTACTC 59.063 42.308 8.74 3.13 0.00 2.59
287 288 6.841601 TGAGGTACCCGTATACATAACTACT 58.158 40.000 8.74 0.00 0.00 2.57
288 289 7.175641 ACATGAGGTACCCGTATACATAACTAC 59.824 40.741 8.74 0.00 0.00 2.73
289 290 7.233632 ACATGAGGTACCCGTATACATAACTA 58.766 38.462 8.74 0.00 0.00 2.24
290 291 6.073314 ACATGAGGTACCCGTATACATAACT 58.927 40.000 8.74 0.08 0.00 2.24
291 292 6.336842 ACATGAGGTACCCGTATACATAAC 57.663 41.667 8.74 0.00 0.00 1.89
292 293 9.925545 ATATACATGAGGTACCCGTATACATAA 57.074 33.333 8.74 0.00 34.07 1.90
293 294 9.925545 AATATACATGAGGTACCCGTATACATA 57.074 33.333 8.74 0.00 34.07 2.29
294 295 8.834004 AATATACATGAGGTACCCGTATACAT 57.166 34.615 8.74 2.69 34.07 2.29
295 296 7.066163 CGAATATACATGAGGTACCCGTATACA 59.934 40.741 8.74 0.27 34.07 2.29
296 297 7.066284 ACGAATATACATGAGGTACCCGTATAC 59.934 40.741 8.74 4.25 34.07 1.47
297 298 7.066163 CACGAATATACATGAGGTACCCGTATA 59.934 40.741 8.74 14.30 34.07 1.47
298 299 5.948162 ACGAATATACATGAGGTACCCGTAT 59.052 40.000 8.74 12.67 34.07 3.06
299 300 5.181811 CACGAATATACATGAGGTACCCGTA 59.818 44.000 8.74 5.93 34.07 4.02
300 301 4.022589 CACGAATATACATGAGGTACCCGT 60.023 45.833 8.74 3.32 34.07 5.28
301 302 4.216902 TCACGAATATACATGAGGTACCCG 59.783 45.833 8.74 2.63 34.07 5.28
302 303 5.717078 TCACGAATATACATGAGGTACCC 57.283 43.478 8.74 0.32 34.07 3.69
303 304 6.423001 GGTTTCACGAATATACATGAGGTACC 59.577 42.308 2.73 2.73 34.07 3.34
304 305 7.208080 AGGTTTCACGAATATACATGAGGTAC 58.792 38.462 0.00 0.00 34.07 3.34
305 306 7.356089 AGGTTTCACGAATATACATGAGGTA 57.644 36.000 0.00 0.00 36.16 3.08
306 307 6.235231 AGGTTTCACGAATATACATGAGGT 57.765 37.500 0.00 0.00 0.00 3.85
307 308 7.553881 AAAGGTTTCACGAATATACATGAGG 57.446 36.000 0.00 0.00 0.00 3.86
308 309 9.490663 GAAAAAGGTTTCACGAATATACATGAG 57.509 33.333 0.00 0.00 42.40 2.90
309 310 9.226606 AGAAAAAGGTTTCACGAATATACATGA 57.773 29.630 0.00 0.00 44.82 3.07
310 311 9.840427 AAGAAAAAGGTTTCACGAATATACATG 57.160 29.630 0.00 0.00 44.82 3.21
315 316 8.573035 TGCTTAAGAAAAAGGTTTCACGAATAT 58.427 29.630 6.67 0.00 44.82 1.28
316 317 7.858879 GTGCTTAAGAAAAAGGTTTCACGAATA 59.141 33.333 6.67 0.00 44.82 1.75
317 318 6.695713 GTGCTTAAGAAAAAGGTTTCACGAAT 59.304 34.615 6.67 0.00 44.82 3.34
318 319 6.031471 GTGCTTAAGAAAAAGGTTTCACGAA 58.969 36.000 6.67 0.00 44.82 3.85
319 320 5.124138 TGTGCTTAAGAAAAAGGTTTCACGA 59.876 36.000 6.67 0.00 44.82 4.35
320 321 5.229260 GTGTGCTTAAGAAAAAGGTTTCACG 59.771 40.000 6.67 0.00 44.82 4.35
321 322 5.229260 CGTGTGCTTAAGAAAAAGGTTTCAC 59.771 40.000 6.67 1.34 44.82 3.18
322 323 5.336744 CGTGTGCTTAAGAAAAAGGTTTCA 58.663 37.500 6.67 0.00 44.82 2.69
323 324 4.206404 GCGTGTGCTTAAGAAAAAGGTTTC 59.794 41.667 6.67 0.00 39.87 2.78
324 325 4.109766 GCGTGTGCTTAAGAAAAAGGTTT 58.890 39.130 6.67 0.00 38.39 3.27
325 326 3.702330 GCGTGTGCTTAAGAAAAAGGTT 58.298 40.909 6.67 0.00 38.39 3.50
326 327 3.349488 GCGTGTGCTTAAGAAAAAGGT 57.651 42.857 6.67 0.00 38.39 3.50
339 340 1.330521 TCAAGACTTCAAAGCGTGTGC 59.669 47.619 0.00 0.00 43.24 4.57
340 341 3.548587 CATCAAGACTTCAAAGCGTGTG 58.451 45.455 0.00 0.00 0.00 3.82
341 342 2.031682 GCATCAAGACTTCAAAGCGTGT 60.032 45.455 0.00 0.00 0.00 4.49
342 343 2.578495 GCATCAAGACTTCAAAGCGTG 58.422 47.619 0.00 0.00 0.00 5.34
343 344 1.537202 GGCATCAAGACTTCAAAGCGT 59.463 47.619 0.00 0.00 0.00 5.07
344 345 1.808945 AGGCATCAAGACTTCAAAGCG 59.191 47.619 0.00 0.00 20.59 4.68
345 346 3.930634 AAGGCATCAAGACTTCAAAGC 57.069 42.857 0.00 0.00 44.22 3.51
352 353 3.554934 TGTGAACAAAGGCATCAAGACT 58.445 40.909 0.00 0.00 36.92 3.24
353 354 3.988379 TGTGAACAAAGGCATCAAGAC 57.012 42.857 0.00 0.00 0.00 3.01
354 355 3.305539 GCATGTGAACAAAGGCATCAAGA 60.306 43.478 0.00 0.00 0.00 3.02
355 356 2.991190 GCATGTGAACAAAGGCATCAAG 59.009 45.455 0.00 0.00 0.00 3.02
356 357 2.364647 TGCATGTGAACAAAGGCATCAA 59.635 40.909 0.07 0.00 30.38 2.57
357 358 1.962100 TGCATGTGAACAAAGGCATCA 59.038 42.857 0.07 0.00 30.38 3.07
358 359 2.728690 TGCATGTGAACAAAGGCATC 57.271 45.000 0.07 0.00 30.38 3.91
359 360 2.933492 GCATGCATGTGAACAAAGGCAT 60.933 45.455 26.79 10.66 40.38 4.40
360 361 1.605968 GCATGCATGTGAACAAAGGCA 60.606 47.619 26.79 6.77 36.46 4.75
361 362 1.073177 GCATGCATGTGAACAAAGGC 58.927 50.000 26.79 5.57 0.00 4.35
362 363 2.063266 GTGCATGCATGTGAACAAAGG 58.937 47.619 25.64 0.00 0.00 3.11
363 364 2.063266 GGTGCATGCATGTGAACAAAG 58.937 47.619 25.64 0.00 0.00 2.77
364 365 1.687660 AGGTGCATGCATGTGAACAAA 59.312 42.857 25.64 0.00 0.00 2.83
365 366 1.330234 AGGTGCATGCATGTGAACAA 58.670 45.000 25.64 4.63 0.00 2.83
366 367 1.811965 GTAGGTGCATGCATGTGAACA 59.188 47.619 25.64 13.94 0.00 3.18
367 368 2.086869 AGTAGGTGCATGCATGTGAAC 58.913 47.619 25.64 20.82 0.00 3.18
368 369 2.086094 CAGTAGGTGCATGCATGTGAA 58.914 47.619 25.64 11.22 0.00 3.18
369 370 1.741528 CAGTAGGTGCATGCATGTGA 58.258 50.000 25.64 12.10 0.00 3.58
380 381 6.092259 GGAAAGTACAAAGTATGCAGTAGGTG 59.908 42.308 0.00 0.00 0.00 4.00
381 382 6.171213 GGAAAGTACAAAGTATGCAGTAGGT 58.829 40.000 0.00 0.00 0.00 3.08
382 383 5.585047 GGGAAAGTACAAAGTATGCAGTAGG 59.415 44.000 0.00 0.00 0.00 3.18
383 384 5.291128 CGGGAAAGTACAAAGTATGCAGTAG 59.709 44.000 0.00 0.00 0.00 2.57
384 385 5.172934 CGGGAAAGTACAAAGTATGCAGTA 58.827 41.667 0.00 0.00 0.00 2.74
385 386 4.000988 CGGGAAAGTACAAAGTATGCAGT 58.999 43.478 0.00 0.00 0.00 4.40
386 387 3.374058 CCGGGAAAGTACAAAGTATGCAG 59.626 47.826 0.00 0.00 0.00 4.41
387 388 3.008157 TCCGGGAAAGTACAAAGTATGCA 59.992 43.478 0.00 0.00 0.00 3.96
388 389 3.602483 TCCGGGAAAGTACAAAGTATGC 58.398 45.455 0.00 0.00 0.00 3.14
389 390 5.424757 TGATCCGGGAAAGTACAAAGTATG 58.575 41.667 0.00 0.00 0.00 2.39
390 391 5.687166 TGATCCGGGAAAGTACAAAGTAT 57.313 39.130 0.00 0.00 0.00 2.12
391 392 5.687166 ATGATCCGGGAAAGTACAAAGTA 57.313 39.130 0.00 0.00 0.00 2.24
392 393 4.569719 ATGATCCGGGAAAGTACAAAGT 57.430 40.909 0.00 0.00 0.00 2.66
393 394 8.848474 ATATTATGATCCGGGAAAGTACAAAG 57.152 34.615 0.00 0.00 0.00 2.77
402 403 9.139734 GGTGTAGTATATATTATGATCCGGGAA 57.860 37.037 0.00 0.00 0.00 3.97
403 404 8.508601 AGGTGTAGTATATATTATGATCCGGGA 58.491 37.037 0.00 0.00 0.00 5.14
404 405 8.577296 CAGGTGTAGTATATATTATGATCCGGG 58.423 40.741 0.00 0.00 0.00 5.73
405 406 9.350951 TCAGGTGTAGTATATATTATGATCCGG 57.649 37.037 0.00 0.00 0.00 5.14
408 409 9.666626 GCGTCAGGTGTAGTATATATTATGATC 57.333 37.037 0.00 0.00 0.00 2.92
409 410 8.343366 CGCGTCAGGTGTAGTATATATTATGAT 58.657 37.037 0.00 0.00 0.00 2.45
410 411 7.335171 ACGCGTCAGGTGTAGTATATATTATGA 59.665 37.037 5.58 0.00 37.67 2.15
411 412 7.470079 ACGCGTCAGGTGTAGTATATATTATG 58.530 38.462 5.58 0.00 37.67 1.90
412 413 7.335171 TGACGCGTCAGGTGTAGTATATATTAT 59.665 37.037 36.40 0.00 40.09 1.28
413 414 6.650390 TGACGCGTCAGGTGTAGTATATATTA 59.350 38.462 36.40 8.51 40.09 0.98
414 415 5.471116 TGACGCGTCAGGTGTAGTATATATT 59.529 40.000 36.40 0.00 40.09 1.28
415 416 4.999311 TGACGCGTCAGGTGTAGTATATAT 59.001 41.667 36.40 0.00 40.09 0.86
416 417 4.379652 TGACGCGTCAGGTGTAGTATATA 58.620 43.478 36.40 9.99 40.09 0.86
417 418 3.208594 TGACGCGTCAGGTGTAGTATAT 58.791 45.455 36.40 0.00 40.09 0.86
418 419 2.631267 TGACGCGTCAGGTGTAGTATA 58.369 47.619 36.40 10.69 40.09 1.47
419 420 1.456296 TGACGCGTCAGGTGTAGTAT 58.544 50.000 36.40 0.00 40.09 2.12
420 421 1.198408 CTTGACGCGTCAGGTGTAGTA 59.802 52.381 37.06 21.56 40.09 1.82
421 422 0.039437 CTTGACGCGTCAGGTGTAGT 60.039 55.000 37.06 0.00 40.09 2.73
422 423 0.039437 ACTTGACGCGTCAGGTGTAG 60.039 55.000 43.62 35.41 46.20 2.74
423 424 2.035421 ACTTGACGCGTCAGGTGTA 58.965 52.632 43.62 28.16 46.20 2.90
424 425 2.812499 ACTTGACGCGTCAGGTGT 59.188 55.556 43.62 34.61 46.20 4.16
427 428 3.414700 GGCACTTGACGCGTCAGG 61.415 66.667 39.41 39.41 41.13 3.86
428 429 2.661537 TGGCACTTGACGCGTCAG 60.662 61.111 37.06 30.97 41.13 3.51
429 430 2.916502 AAGTGGCACTTGACGCGTCA 62.917 55.000 36.40 36.40 37.00 4.35
430 431 2.244651 AAGTGGCACTTGACGCGTC 61.245 57.895 30.71 31.66 37.00 5.19
431 432 2.203015 AAGTGGCACTTGACGCGT 60.203 55.556 30.71 13.85 37.00 6.01
438 439 1.490490 TCAAGTCCTCAAGTGGCACTT 59.510 47.619 26.54 26.54 39.39 3.16
439 440 1.071385 CTCAAGTCCTCAAGTGGCACT 59.929 52.381 15.88 15.88 0.00 4.40
440 441 1.517242 CTCAAGTCCTCAAGTGGCAC 58.483 55.000 10.29 10.29 0.00 5.01
441 442 0.397941 CCTCAAGTCCTCAAGTGGCA 59.602 55.000 0.00 0.00 0.00 4.92
442 443 0.398318 ACCTCAAGTCCTCAAGTGGC 59.602 55.000 0.00 0.00 0.00 5.01
443 444 1.337260 CGACCTCAAGTCCTCAAGTGG 60.337 57.143 0.00 0.00 43.08 4.00
444 445 1.341531 ACGACCTCAAGTCCTCAAGTG 59.658 52.381 0.00 0.00 43.08 3.16
445 446 1.614413 GACGACCTCAAGTCCTCAAGT 59.386 52.381 0.00 0.00 43.08 3.16
446 447 1.889829 AGACGACCTCAAGTCCTCAAG 59.110 52.381 0.00 0.00 43.08 3.02
447 448 1.996798 AGACGACCTCAAGTCCTCAA 58.003 50.000 0.00 0.00 43.08 3.02
448 449 1.996798 AAGACGACCTCAAGTCCTCA 58.003 50.000 0.00 0.00 43.08 3.86
449 450 3.060602 CAAAAGACGACCTCAAGTCCTC 58.939 50.000 0.00 0.00 43.08 3.71
450 451 2.698797 TCAAAAGACGACCTCAAGTCCT 59.301 45.455 0.00 0.00 43.08 3.85
451 452 3.107642 TCAAAAGACGACCTCAAGTCC 57.892 47.619 0.00 0.00 43.08 3.85
468 469 6.812998 ACTTAATCCGGTCGATAATCTTCAA 58.187 36.000 0.00 0.00 0.00 2.69
478 479 5.192927 TCCTAGTTAACTTAATCCGGTCGA 58.807 41.667 14.49 0.00 0.00 4.20
479 480 5.505173 TCCTAGTTAACTTAATCCGGTCG 57.495 43.478 14.49 0.00 0.00 4.79
480 481 5.288015 GCTCCTAGTTAACTTAATCCGGTC 58.712 45.833 14.49 0.20 0.00 4.79
481 482 4.202090 CGCTCCTAGTTAACTTAATCCGGT 60.202 45.833 14.49 0.00 0.00 5.28
482 483 4.296690 CGCTCCTAGTTAACTTAATCCGG 58.703 47.826 14.49 0.00 0.00 5.14
483 484 4.296690 CCGCTCCTAGTTAACTTAATCCG 58.703 47.826 14.49 11.24 0.00 4.18
484 485 4.056740 GCCGCTCCTAGTTAACTTAATCC 58.943 47.826 14.49 0.00 0.00 3.01
485 486 4.690122 TGCCGCTCCTAGTTAACTTAATC 58.310 43.478 14.49 0.00 0.00 1.75
486 487 4.694339 CTGCCGCTCCTAGTTAACTTAAT 58.306 43.478 14.49 0.00 0.00 1.40
487 488 3.677976 GCTGCCGCTCCTAGTTAACTTAA 60.678 47.826 14.49 0.00 0.00 1.85
490 491 0.175989 GCTGCCGCTCCTAGTTAACT 59.824 55.000 13.68 13.68 0.00 2.24
492 493 2.591915 AGCTGCCGCTCCTAGTTAA 58.408 52.632 0.00 0.00 45.15 2.01
493 494 4.356979 AGCTGCCGCTCCTAGTTA 57.643 55.556 0.00 0.00 45.15 2.24
508 509 1.960763 CTTTGGGGCGGCAAAAAGC 60.961 57.895 18.30 0.00 44.65 3.51
533 534 0.927537 CACTTGTTCTTGACGCGTCA 59.072 50.000 36.40 36.40 37.91 4.35
541 542 3.189285 CACTTTTGGCCACTTGTTCTTG 58.811 45.455 3.88 0.00 0.00 3.02
542 543 2.168313 CCACTTTTGGCCACTTGTTCTT 59.832 45.455 3.88 0.00 35.56 2.52
556 557 4.776837 TGCATTATTGATCCCACCACTTTT 59.223 37.500 0.00 0.00 0.00 2.27
585 586 6.755190 GCTTGTGCATAAAAACTAATCAAGC 58.245 36.000 12.51 12.51 44.66 4.01
915 922 0.899019 GTTGAGGGTGGGTCTCTCTC 59.101 60.000 0.00 0.00 43.66 3.20
916 923 0.545548 GGTTGAGGGTGGGTCTCTCT 60.546 60.000 0.00 0.00 43.66 3.10
917 924 0.836400 TGGTTGAGGGTGGGTCTCTC 60.836 60.000 0.00 0.00 43.58 3.20
918 925 1.128188 GTGGTTGAGGGTGGGTCTCT 61.128 60.000 0.00 0.00 32.78 3.10
919 926 1.375326 GTGGTTGAGGGTGGGTCTC 59.625 63.158 0.00 0.00 0.00 3.36
920 927 1.385347 TGTGGTTGAGGGTGGGTCT 60.385 57.895 0.00 0.00 0.00 3.85
921 928 1.073199 CTGTGGTTGAGGGTGGGTC 59.927 63.158 0.00 0.00 0.00 4.46
922 929 3.133365 GCTGTGGTTGAGGGTGGGT 62.133 63.158 0.00 0.00 0.00 4.51
923 930 2.282462 GCTGTGGTTGAGGGTGGG 60.282 66.667 0.00 0.00 0.00 4.61
951 958 1.398390 GGATGCAAGAACAGCTTACCG 59.602 52.381 0.00 0.00 34.31 4.02
953 960 3.338249 TCTGGATGCAAGAACAGCTTAC 58.662 45.455 0.00 0.00 34.31 2.34
966 973 1.472376 GCTACACTGGTCTCTGGATGC 60.472 57.143 0.00 0.00 0.00 3.91
993 1004 0.970427 TCACCACCTGCATCGCTAGA 60.970 55.000 0.00 0.00 0.00 2.43
1108 1119 1.859703 CATGCTCTTCATCTCTCGCAC 59.140 52.381 0.00 0.00 31.79 5.34
1110 1121 0.860533 GCATGCTCTTCATCTCTCGC 59.139 55.000 11.37 0.00 31.79 5.03
1137 1148 2.669569 TCCGCCACTTTGCAGAGC 60.670 61.111 3.74 0.00 0.00 4.09
1215 1226 4.880120 ACGATGTCTTCTATGTCGTAGGAA 59.120 41.667 0.00 0.00 42.91 3.36
1271 1282 0.453390 GCCATCAGCAGCAGGTTTAC 59.547 55.000 0.00 0.00 42.97 2.01
1353 1364 2.341543 ATGGCGCTAGCGATCTGG 59.658 61.111 39.52 11.13 46.35 3.86
1434 1445 2.922758 GCATAGCTAGGTCCGTCAATCG 60.923 54.545 7.32 0.00 39.52 3.34
1435 1446 2.297597 AGCATAGCTAGGTCCGTCAATC 59.702 50.000 7.32 0.00 36.99 2.67
1436 1447 2.320781 AGCATAGCTAGGTCCGTCAAT 58.679 47.619 7.32 0.00 36.99 2.57
1437 1448 1.776662 AGCATAGCTAGGTCCGTCAA 58.223 50.000 7.32 0.00 36.99 3.18
1438 1449 1.776662 AAGCATAGCTAGGTCCGTCA 58.223 50.000 7.32 0.00 38.25 4.35
1449 1461 0.740737 ATCGGCAACCAAAGCATAGC 59.259 50.000 0.00 0.00 0.00 2.97
1455 1467 0.958091 TGACCAATCGGCAACCAAAG 59.042 50.000 0.00 0.00 34.57 2.77
1459 1471 0.605319 TCACTGACCAATCGGCAACC 60.605 55.000 0.00 0.00 34.14 3.77
1460 1472 0.517316 GTCACTGACCAATCGGCAAC 59.483 55.000 0.00 0.00 34.14 4.17
1461 1473 0.396435 AGTCACTGACCAATCGGCAA 59.604 50.000 5.51 0.00 34.14 4.52
1464 1476 3.198068 CCATAAGTCACTGACCAATCGG 58.802 50.000 5.51 0.00 37.24 4.18
1466 1478 4.330074 CGAACCATAAGTCACTGACCAATC 59.670 45.833 5.51 0.00 32.18 2.67
1467 1479 4.253685 CGAACCATAAGTCACTGACCAAT 58.746 43.478 5.51 0.00 32.18 3.16
1468 1480 3.070446 ACGAACCATAAGTCACTGACCAA 59.930 43.478 5.51 0.00 32.18 3.67
1470 1482 2.993899 CACGAACCATAAGTCACTGACC 59.006 50.000 5.51 0.00 32.18 4.02
1472 1484 2.894765 TCCACGAACCATAAGTCACTGA 59.105 45.455 0.00 0.00 0.00 3.41
1482 1497 0.978146 CCTCTCCCTCCACGAACCAT 60.978 60.000 0.00 0.00 0.00 3.55
1483 1498 1.609501 CCTCTCCCTCCACGAACCA 60.610 63.158 0.00 0.00 0.00 3.67
1504 1519 0.385751 CCGATGTGGCGATGTCTACT 59.614 55.000 0.00 0.00 0.00 2.57
1505 1520 0.597637 CCCGATGTGGCGATGTCTAC 60.598 60.000 0.00 0.00 35.87 2.59
1515 1530 0.107214 AAGTACATGCCCCGATGTGG 60.107 55.000 0.00 0.00 37.16 4.17
1519 1534 4.706842 AAATAGAAGTACATGCCCCGAT 57.293 40.909 0.00 0.00 0.00 4.18
1520 1535 4.897076 TCTAAATAGAAGTACATGCCCCGA 59.103 41.667 0.00 0.00 0.00 5.14
1521 1536 5.209818 TCTAAATAGAAGTACATGCCCCG 57.790 43.478 0.00 0.00 0.00 5.73
1522 1537 6.769512 TGATCTAAATAGAAGTACATGCCCC 58.230 40.000 0.00 0.00 35.69 5.80
1523 1538 8.677148 TTTGATCTAAATAGAAGTACATGCCC 57.323 34.615 0.00 0.00 35.69 5.36
1585 1600 0.109086 CTGTGTACCTGCGAGTGGAG 60.109 60.000 0.00 0.00 0.00 3.86
1589 1604 1.037493 TCAACTGTGTACCTGCGAGT 58.963 50.000 0.00 0.00 0.00 4.18
1606 1621 6.653320 CCGTAGGCTTAGGCAAAATATTATCA 59.347 38.462 8.84 0.00 46.14 2.15
1630 1645 1.269831 GGATCGATAGTGGTCACAGCC 60.270 57.143 0.00 0.00 37.40 4.85
1690 1705 1.061424 TCCCTCTTCCCATAGATGCCA 60.061 52.381 0.00 0.00 0.00 4.92
1732 1747 3.574354 GGATCTTCATCTCCCAAAGCT 57.426 47.619 0.00 0.00 0.00 3.74
1795 1810 1.002134 AGTGGTCTTGCCCAATCCG 60.002 57.895 0.00 0.00 35.92 4.18
1816 1831 5.521906 TCTTGTCATATACTGCTCTGACC 57.478 43.478 0.00 0.00 37.74 4.02
1974 1989 4.634443 CCCGGATTTCTTCGATAAGTTGTT 59.366 41.667 0.73 0.00 34.13 2.83
1999 2014 2.821991 ACCTCTTGTCGTGAAGGAAG 57.178 50.000 0.00 0.00 0.00 3.46
2031 2046 2.032290 GGAACGTTTGACTGTAACTGGC 60.032 50.000 0.46 0.00 0.00 4.85
2047 2062 1.813513 AAAGCTCATCACCAGGAACG 58.186 50.000 0.00 0.00 0.00 3.95
2076 2091 2.246719 AACTGCTTCGATAGGATGCC 57.753 50.000 0.00 0.00 43.29 4.40
2099 2114 9.666626 CTAGTACTAGTTAATCGGTCATTTGAG 57.333 37.037 20.01 0.00 0.00 3.02
2100 2115 9.399797 TCTAGTACTAGTTAATCGGTCATTTGA 57.600 33.333 25.58 1.78 34.84 2.69
2103 2118 8.848182 CCTTCTAGTACTAGTTAATCGGTCATT 58.152 37.037 25.58 0.00 34.84 2.57
2106 2121 6.486320 AGCCTTCTAGTACTAGTTAATCGGTC 59.514 42.308 25.58 14.21 34.84 4.79
2107 2122 6.363882 AGCCTTCTAGTACTAGTTAATCGGT 58.636 40.000 25.58 12.93 34.84 4.69
2108 2123 6.880942 AGCCTTCTAGTACTAGTTAATCGG 57.119 41.667 25.58 18.08 34.84 4.18
2109 2124 7.013083 TCCAAGCCTTCTAGTACTAGTTAATCG 59.987 40.741 25.58 12.27 34.84 3.34
2110 2125 8.235359 TCCAAGCCTTCTAGTACTAGTTAATC 57.765 38.462 25.58 13.98 34.84 1.75
2111 2126 8.605325 TTCCAAGCCTTCTAGTACTAGTTAAT 57.395 34.615 25.58 9.80 34.84 1.40
2112 2127 8.605325 ATTCCAAGCCTTCTAGTACTAGTTAA 57.395 34.615 25.58 14.75 34.84 2.01
2114 2129 7.840210 AGTATTCCAAGCCTTCTAGTACTAGTT 59.160 37.037 25.58 12.19 34.84 2.24
2115 2130 7.355890 AGTATTCCAAGCCTTCTAGTACTAGT 58.644 38.462 25.58 6.94 34.84 2.57
2116 2131 7.826918 AGTATTCCAAGCCTTCTAGTACTAG 57.173 40.000 21.87 21.87 34.56 2.57
2117 2132 9.517868 GATAGTATTCCAAGCCTTCTAGTACTA 57.482 37.037 1.89 1.89 0.00 1.82
2118 2133 7.452189 GGATAGTATTCCAAGCCTTCTAGTACT 59.548 40.741 0.00 0.00 35.72 2.73
2119 2134 7.575343 CGGATAGTATTCCAAGCCTTCTAGTAC 60.575 44.444 0.00 0.00 35.34 2.73
2120 2135 6.433404 CGGATAGTATTCCAAGCCTTCTAGTA 59.567 42.308 0.00 0.00 35.34 1.82
2121 2136 5.244178 CGGATAGTATTCCAAGCCTTCTAGT 59.756 44.000 0.00 0.00 35.34 2.57
2122 2137 5.715070 CGGATAGTATTCCAAGCCTTCTAG 58.285 45.833 0.00 0.00 35.34 2.43
2133 2148 1.817447 ACTAGCGGCGGATAGTATTCC 59.183 52.381 19.21 0.00 43.22 3.01
2141 2156 0.108615 GATGCATACTAGCGGCGGAT 60.109 55.000 9.78 0.00 37.31 4.18
2147 2162 8.006590 GTCTAATTGAAAAGATGCATACTAGCG 58.993 37.037 0.00 0.00 37.31 4.26
2170 2271 9.715121 TCTTTATAGGAAACGTGTAAAATGTCT 57.285 29.630 0.00 0.00 0.00 3.41
2199 2300 9.062524 TGTACCTCAATTGTACAATATTATGCC 57.937 33.333 21.07 8.64 44.01 4.40
2217 2730 8.783093 CAGAACAAATCTACAAATTGTACCTCA 58.217 33.333 1.08 0.00 36.33 3.86
2238 2751 3.244561 TGAACATCCTCCTCCAACAGAAC 60.245 47.826 0.00 0.00 0.00 3.01
2241 2754 3.641434 ATGAACATCCTCCTCCAACAG 57.359 47.619 0.00 0.00 0.00 3.16
2259 2774 7.118390 CGAGAGCCCATAGGAAAGTTAATAATG 59.882 40.741 0.00 0.00 33.47 1.90
2272 2787 3.996124 CGCCCGAGAGCCCATAGG 61.996 72.222 0.00 0.00 0.00 2.57
2277 2792 4.699522 ACAAACGCCCGAGAGCCC 62.700 66.667 0.00 0.00 0.00 5.19
2313 2872 4.466827 TCAAAACCACTAGGAAAACCTCC 58.533 43.478 0.00 0.00 45.81 4.30
2356 2975 7.444792 TCCTAGTTAACCGAAAAAGTGCAATTA 59.555 33.333 0.00 0.00 0.00 1.40
2363 2982 9.212641 GAACTATTCCTAGTTAACCGAAAAAGT 57.787 33.333 0.88 7.37 45.97 2.66
2366 2985 9.729281 AATGAACTATTCCTAGTTAACCGAAAA 57.271 29.630 0.88 0.00 45.97 2.29
2370 2989 6.018180 GCCAATGAACTATTCCTAGTTAACCG 60.018 42.308 0.88 0.00 45.97 4.44
2380 2999 4.883585 TGATGTCTGCCAATGAACTATTCC 59.116 41.667 0.00 0.00 0.00 3.01
2386 3005 3.002042 CGATCTGATGTCTGCCAATGAAC 59.998 47.826 0.00 0.00 0.00 3.18
2387 3006 3.200483 CGATCTGATGTCTGCCAATGAA 58.800 45.455 0.00 0.00 0.00 2.57
2398 3445 5.760253 GGGTATCAAATTCACGATCTGATGT 59.240 40.000 0.00 0.00 0.00 3.06
2401 3448 5.351948 TGGGTATCAAATTCACGATCTGA 57.648 39.130 0.00 0.00 0.00 3.27
2443 3490 9.862371 AAGTAATGCACTATATCTATCCGAAAG 57.138 33.333 0.00 0.00 36.04 2.62
2478 3545 7.715249 ACATGTAGTCACTGTTATGAAACTGTT 59.285 33.333 0.00 0.00 42.97 3.16
2480 3547 7.171508 ACACATGTAGTCACTGTTATGAAACTG 59.828 37.037 0.00 0.00 39.65 3.16
2515 3584 3.343941 TTAGTAACAGATGGGTGGCAC 57.656 47.619 9.70 9.70 0.00 5.01
2616 3686 9.123902 CACCAGATTCCAAACTCATCAATAATA 57.876 33.333 0.00 0.00 0.00 0.98
2693 3763 3.438087 GCTCATAAAGCGCCATATGACAT 59.562 43.478 22.05 0.00 42.21 3.06
2695 3765 3.461946 GCTCATAAAGCGCCATATGAC 57.538 47.619 22.05 16.65 42.21 3.06
2712 3784 2.042831 GCACACATCACAGGGGCTC 61.043 63.158 0.00 0.00 0.00 4.70
2748 3820 3.714798 ACCTGTACAAGTTGGGAGAGAAA 59.285 43.478 7.96 0.00 0.00 2.52
2756 3828 4.421948 GACGAGATACCTGTACAAGTTGG 58.578 47.826 7.96 0.00 0.00 3.77
2889 3961 2.945668 GGAAGGACAACATGCTATGGAC 59.054 50.000 0.00 0.00 33.60 4.02
3029 4101 6.601613 ACCGCCACATTTCTTCAAAATATCTA 59.398 34.615 0.00 0.00 0.00 1.98
3085 4157 3.995199 TCTGATGACCAACAGTGAGAAC 58.005 45.455 0.00 0.00 35.84 3.01
3141 4213 2.156098 GTAAGTCCACGCCCAATTGAA 58.844 47.619 7.12 0.00 0.00 2.69
3168 4240 2.360165 CTGCATTTCCTCCATACTTGCC 59.640 50.000 0.00 0.00 0.00 4.52
3198 4270 5.242838 AGGCAGATCATAGTAGCTAAGTGAC 59.757 44.000 0.00 0.00 0.00 3.67
3202 4274 7.212976 TCAAAAGGCAGATCATAGTAGCTAAG 58.787 38.462 0.00 0.00 0.00 2.18
3286 4358 7.828223 GCATATCCACTTCCATATCAGATCTTT 59.172 37.037 0.00 0.00 0.00 2.52
3336 4408 6.047511 ACTTCAAAGATGCTAGTCTGATGT 57.952 37.500 0.00 0.00 0.00 3.06
3371 4443 9.210329 TGTATCTGTTTATGAGCTCGTTAAAAA 57.790 29.630 14.93 11.83 0.00 1.94
3466 4539 3.005554 CAGCTGACAAGGAACGAATCAT 58.994 45.455 8.42 0.00 0.00 2.45
3526 4599 6.693545 CGGATATTTCTGTGAGAACTAGTCAC 59.306 42.308 0.00 0.57 43.97 3.67
3540 4613 7.608376 TGGAGAGATAGTCTACGGATATTTCTG 59.392 40.741 0.00 0.00 39.37 3.02
3543 4616 7.691213 TCTGGAGAGATAGTCTACGGATATTT 58.309 38.462 0.00 0.00 45.55 1.40
3556 4629 4.912586 TCCTCGGTATTCTGGAGAGATAG 58.087 47.826 0.00 0.00 0.00 2.08
3567 4640 4.271291 GCTTGTTGATCTTCCTCGGTATTC 59.729 45.833 0.00 0.00 0.00 1.75
3572 4645 2.005451 CAGCTTGTTGATCTTCCTCGG 58.995 52.381 0.00 0.00 0.00 4.63
3573 4646 1.396301 GCAGCTTGTTGATCTTCCTCG 59.604 52.381 0.00 0.00 0.00 4.63
3589 4662 2.362736 TGAATTGATGAGAGGTGCAGC 58.637 47.619 8.11 8.11 0.00 5.25
3592 4665 4.157289 ACACATTGAATTGATGAGAGGTGC 59.843 41.667 5.62 0.00 0.00 5.01
3613 4686 5.660864 TGATGGACCTCACTTGTGATATACA 59.339 40.000 3.79 3.31 37.56 2.29
3627 4700 3.691609 GTGGAAAGACATTGATGGACCTC 59.308 47.826 0.00 0.00 0.00 3.85
3638 4711 1.901591 CACAGCTGGTGGAAAGACAT 58.098 50.000 19.93 0.00 44.04 3.06
3709 4782 1.034838 GCCCCAATACGGCATCAACA 61.035 55.000 0.00 0.00 46.27 3.33
3730 4803 5.946377 CCCTCAAGTTAGGCTGAAAGTTAAT 59.054 40.000 0.00 0.00 35.09 1.40
3796 4869 2.930682 GCAGTTCAGAGATACCGGTTTC 59.069 50.000 15.04 15.87 0.00 2.78
3797 4870 2.354805 GGCAGTTCAGAGATACCGGTTT 60.355 50.000 15.04 4.10 0.00 3.27
3801 4874 1.751351 TCTGGCAGTTCAGAGATACCG 59.249 52.381 15.27 0.00 38.70 4.02
3816 4889 5.930135 TGTAGATTTCCTATTTCCTCTGGC 58.070 41.667 0.00 0.00 0.00 4.85
3844 4917 5.239744 TGCGTCCTAAATCTAAAACTTGCAA 59.760 36.000 0.00 0.00 0.00 4.08
3865 4938 6.075918 GCAAATGTCTCATATCATTAGTGCG 58.924 40.000 0.00 0.00 32.28 5.34
3866 4939 6.016860 TGGCAAATGTCTCATATCATTAGTGC 60.017 38.462 0.00 0.00 37.21 4.40
3867 4940 7.500720 TGGCAAATGTCTCATATCATTAGTG 57.499 36.000 0.00 0.00 34.45 2.74
3868 4941 7.940688 TGATGGCAAATGTCTCATATCATTAGT 59.059 33.333 0.00 0.00 34.45 2.24
3869 4942 8.331730 TGATGGCAAATGTCTCATATCATTAG 57.668 34.615 0.00 0.00 34.45 1.73
3870 4943 8.873186 ATGATGGCAAATGTCTCATATCATTA 57.127 30.769 0.00 0.00 34.45 1.90
3871 4944 7.670140 AGATGATGGCAAATGTCTCATATCATT 59.330 33.333 0.00 0.00 35.02 2.57
3872 4945 7.175797 AGATGATGGCAAATGTCTCATATCAT 58.824 34.615 0.00 0.00 36.90 2.45
3876 5604 7.389607 CACATAGATGATGGCAAATGTCTCATA 59.610 37.037 0.00 0.00 40.18 2.15
3883 5611 5.769367 CTTCCACATAGATGATGGCAAATG 58.231 41.667 0.00 0.00 40.18 2.32
3884 5612 4.280174 GCTTCCACATAGATGATGGCAAAT 59.720 41.667 0.00 0.00 40.18 2.32
3891 5619 7.341805 ACTTTTGTAGCTTCCACATAGATGAT 58.658 34.615 0.00 0.00 0.00 2.45
3910 5638 5.982890 ACCCTGATGACCATTAACTTTTG 57.017 39.130 0.00 0.00 0.00 2.44
3911 5639 6.782494 AGAAACCCTGATGACCATTAACTTTT 59.218 34.615 0.00 0.00 0.00 2.27
3927 5655 0.321122 AGCAGCGAGAAGAAACCCTG 60.321 55.000 0.00 0.00 0.00 4.45
3929 5657 2.317530 ATAGCAGCGAGAAGAAACCC 57.682 50.000 0.00 0.00 0.00 4.11
3963 5691 3.165071 CAAAGAAGCCAGGTTACCCAAT 58.835 45.455 0.00 0.00 0.00 3.16
3981 5709 2.314071 TCCCCTCGACTACTTCCAAA 57.686 50.000 0.00 0.00 0.00 3.28
3991 5719 0.892063 GAGGCATAGATCCCCTCGAC 59.108 60.000 4.26 0.00 36.17 4.20
3997 5725 3.365536 TCGGAGAGGCATAGATCCC 57.634 57.895 0.00 0.00 0.00 3.85
4020 5748 1.583477 GAAGCCAAGCTCTTGCACC 59.417 57.895 4.17 0.00 38.25 5.01
4036 5764 1.426251 TTCCTCAGCCTTGCCAGGAA 61.426 55.000 8.31 11.28 44.19 3.36
4037 5765 1.845627 CTTCCTCAGCCTTGCCAGGA 61.846 60.000 8.31 1.23 44.19 3.86
4066 5794 3.513912 TCGAGGCTCCAATCAAAGAAGTA 59.486 43.478 9.32 0.00 0.00 2.24
4072 5800 0.984230 ACCTCGAGGCTCCAATCAAA 59.016 50.000 31.56 0.00 39.32 2.69
4118 5846 5.104610 AGACTTCTGATATCATGCAGGTTGT 60.105 40.000 5.72 0.00 33.05 3.32
4135 5863 2.479730 CGCAGGCAATACGTAGACTTCT 60.480 50.000 0.08 0.00 0.00 2.85
4136 5864 1.852895 CGCAGGCAATACGTAGACTTC 59.147 52.381 0.08 0.00 0.00 3.01
4144 5872 1.145759 ACATCGTCGCAGGCAATACG 61.146 55.000 4.92 4.92 36.71 3.06
4150 5878 2.183300 TGGTACATCGTCGCAGGC 59.817 61.111 0.00 0.00 0.00 4.85
4213 5942 6.883756 TGGTCTGATGTGAAAGTATATTTGCA 59.116 34.615 0.00 0.00 0.00 4.08
4253 5982 4.630894 TTTGTTATCCACATCGGCAATC 57.369 40.909 0.00 0.00 34.43 2.67
4306 6035 5.914898 TCCTTGACTCTGATATGAAACGA 57.085 39.130 0.00 0.00 0.00 3.85
4319 6048 1.467734 CTTGCTGCACATCCTTGACTC 59.532 52.381 0.00 0.00 0.00 3.36
4369 6098 1.786937 ATCCAGAGATGGCGAAGAGT 58.213 50.000 0.00 0.00 0.00 3.24
4390 6119 0.975040 TTTGTTTGGTGGGTGCTGCT 60.975 50.000 0.00 0.00 0.00 4.24
4408 6137 1.021390 CCGATGACGAGCAGCCTTTT 61.021 55.000 0.00 0.00 42.66 2.27
4481 6210 5.799213 CTCCTTGTTGAAAGACTACCTGAT 58.201 41.667 0.00 0.00 0.00 2.90
4524 6253 3.605634 CACACCCAGATTAAATCGGACA 58.394 45.455 0.00 0.00 0.00 4.02
4533 6262 1.298340 CACCCGCACACCCAGATTA 59.702 57.895 0.00 0.00 0.00 1.75
4587 6316 0.252103 AGAGAAGGTTACCCGAGCCA 60.252 55.000 0.00 0.00 35.12 4.75
4591 6320 2.599408 AGTGAGAGAAGGTTACCCGA 57.401 50.000 0.00 0.00 35.12 5.14
4592 6321 2.561419 TGAAGTGAGAGAAGGTTACCCG 59.439 50.000 0.00 0.00 35.12 5.28
4602 6331 2.630889 ATCCACCCTGAAGTGAGAGA 57.369 50.000 0.00 0.00 40.34 3.10
4683 6432 2.871096 TGGTTAGGATGGGTGTTCAC 57.129 50.000 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.