Multiple sequence alignment - TraesCS5A01G335800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G335800 chr5A 100.000 2737 0 0 1 2737 544898008 544900744 0.000000e+00 5055.0
1 TraesCS5A01G335800 chr5A 92.063 693 52 3 1576 2267 384021034 384021724 0.000000e+00 972.0
2 TraesCS5A01G335800 chr5A 83.171 820 119 15 725 1541 242469204 242468401 0.000000e+00 732.0
3 TraesCS5A01G335800 chr5A 92.191 461 35 1 2278 2737 128753540 128754000 0.000000e+00 651.0
4 TraesCS5A01G335800 chr5A 92.174 460 33 3 2279 2737 41508875 41509332 0.000000e+00 647.0
5 TraesCS5A01G335800 chr5A 97.475 198 4 1 1 198 384013690 384013886 1.210000e-88 337.0
6 TraesCS5A01G335800 chr4A 89.933 1490 117 12 809 2268 24458704 24460190 0.000000e+00 1890.0
7 TraesCS5A01G335800 chr4A 82.924 1019 102 34 810 1817 677759813 677758856 0.000000e+00 852.0
8 TraesCS5A01G335800 chr4A 84.146 820 95 20 810 1613 490341776 490342576 0.000000e+00 761.0
9 TraesCS5A01G335800 chr4A 92.408 461 34 1 2278 2737 496913723 496914183 0.000000e+00 656.0
10 TraesCS5A01G335800 chr4A 91.974 461 36 1 2278 2737 216328741 216328281 0.000000e+00 645.0
11 TraesCS5A01G335800 chr4A 95.833 192 8 0 1 192 24458065 24458256 7.360000e-81 311.0
12 TraesCS5A01G335800 chr4A 83.838 99 10 5 674 768 660541469 660541565 3.750000e-14 89.8
13 TraesCS5A01G335800 chr3D 88.911 1488 127 25 810 2277 571760202 571758733 0.000000e+00 1799.0
14 TraesCS5A01G335800 chr3D 92.174 460 33 3 2279 2737 465150971 465151428 0.000000e+00 647.0
15 TraesCS5A01G335800 chr3D 98.844 173 2 0 1 173 416544911 416545083 2.650000e-80 309.0
16 TraesCS5A01G335800 chr3D 91.071 224 11 6 240 462 416545085 416545300 7.410000e-76 294.0
17 TraesCS5A01G335800 chr2D 89.886 1404 93 19 686 2085 648988801 648990159 0.000000e+00 1760.0
18 TraesCS5A01G335800 chr2D 96.000 75 3 0 622 696 648988700 648988774 3.700000e-24 122.0
19 TraesCS5A01G335800 chr2B 88.041 1480 151 16 810 2268 124026687 124025213 0.000000e+00 1729.0
20 TraesCS5A01G335800 chr2B 83.743 732 98 11 898 1611 129818036 129818764 0.000000e+00 673.0
21 TraesCS5A01G335800 chr2B 86.374 455 47 8 1329 1775 676215206 676214759 1.470000e-132 483.0
22 TraesCS5A01G335800 chr2B 94.286 175 9 1 182 355 124026918 124026744 1.620000e-67 267.0
23 TraesCS5A01G335800 chr4D 89.074 1382 123 15 723 2085 225340863 225339491 0.000000e+00 1690.0
24 TraesCS5A01G335800 chr4D 87.688 1397 123 16 723 2085 410839416 410840797 0.000000e+00 1581.0
25 TraesCS5A01G335800 chr4D 89.908 654 60 5 1376 2027 239800773 239800124 0.000000e+00 837.0
26 TraesCS5A01G335800 chr5D 87.687 1072 101 21 1212 2268 20270736 20269681 0.000000e+00 1219.0
27 TraesCS5A01G335800 chr5D 81.864 1202 174 27 723 1912 161437847 161436678 0.000000e+00 972.0
28 TraesCS5A01G335800 chr5D 92.225 463 33 3 2276 2737 536939707 536940167 0.000000e+00 652.0
29 TraesCS5A01G335800 chr5D 97.205 322 9 0 362 683 384519637 384519316 1.850000e-151 545.0
30 TraesCS5A01G335800 chr5D 96.703 273 8 1 362 633 313520982 313520710 1.160000e-123 453.0
31 TraesCS5A01G335800 chr5D 98.266 173 3 0 1 173 384519897 384519725 1.230000e-78 303.0
32 TraesCS5A01G335800 chr5D 97.688 173 4 0 1 173 313521242 313521070 5.730000e-77 298.0
33 TraesCS5A01G335800 chr5D 95.082 122 6 0 562 683 313520734 313520613 2.780000e-45 193.0
34 TraesCS5A01G335800 chr5D 81.176 85 14 1 440 522 313520784 313520700 1.760000e-07 67.6
35 TraesCS5A01G335800 chr5D 88.679 53 4 1 440 490 384519439 384519387 2.280000e-06 63.9
36 TraesCS5A01G335800 chr5B 85.240 1206 140 22 723 1908 189704886 189706073 0.000000e+00 1206.0
37 TraesCS5A01G335800 chr5B 94.150 359 20 1 1 358 189704393 189704751 1.850000e-151 545.0
38 TraesCS5A01G335800 chr5B 96.703 182 6 0 1 182 399756476 399756657 1.230000e-78 303.0
39 TraesCS5A01G335800 chr6B 89.514 925 80 10 1355 2267 425132299 425133218 0.000000e+00 1155.0
40 TraesCS5A01G335800 chr6B 92.072 391 29 2 1877 2266 238436547 238436158 1.430000e-152 549.0
41 TraesCS5A01G335800 chr6B 97.273 110 3 0 574 683 238445511 238445402 1.290000e-43 187.0
42 TraesCS5A01G335800 chr6B 84.536 97 13 2 674 768 630184191 630184095 8.070000e-16 95.3
43 TraesCS5A01G335800 chr7D 86.223 1096 105 23 810 1889 152035858 152034793 0.000000e+00 1146.0
44 TraesCS5A01G335800 chr7D 92.191 461 32 4 2279 2737 204356230 204355772 0.000000e+00 649.0
45 TraesCS5A01G335800 chr7D 94.330 388 21 1 1882 2268 152023502 152023115 6.530000e-166 593.0
46 TraesCS5A01G335800 chr7D 93.714 175 10 1 182 355 152036089 152035915 7.520000e-66 261.0
47 TraesCS5A01G335800 chr7A 90.220 818 78 2 1461 2277 220994323 220995139 0.000000e+00 1066.0
48 TraesCS5A01G335800 chr7A 92.375 459 34 1 2278 2736 290946765 290946308 0.000000e+00 652.0
49 TraesCS5A01G335800 chr7A 97.895 190 4 0 435 624 579483327 579483138 2.030000e-86 329.0
50 TraesCS5A01G335800 chr7A 95.455 110 5 0 574 683 220992640 220992749 2.800000e-40 176.0
51 TraesCS5A01G335800 chr6D 87.715 814 76 14 810 1611 202663511 202664312 0.000000e+00 928.0
52 TraesCS5A01G335800 chr6D 96.894 322 10 0 362 683 446392424 446392103 8.620000e-150 540.0
53 TraesCS5A01G335800 chr6D 98.266 173 3 0 1 173 446392684 446392512 1.230000e-78 303.0
54 TraesCS5A01G335800 chr6D 88.889 54 4 1 439 490 446392227 446392174 6.330000e-07 65.8
55 TraesCS5A01G335800 chr1D 85.698 881 112 9 971 1848 348147925 348147056 0.000000e+00 917.0
56 TraesCS5A01G335800 chr1D 96.029 277 9 1 362 636 463801757 463801481 1.490000e-122 449.0
57 TraesCS5A01G335800 chr1D 97.688 173 4 0 1 173 463802017 463801845 5.730000e-77 298.0
58 TraesCS5A01G335800 chr6A 92.174 460 35 1 2278 2737 366419927 366420385 0.000000e+00 649.0
59 TraesCS5A01G335800 chr2A 92.958 284 10 4 362 636 259577035 259577317 3.280000e-109 405.0
60 TraesCS5A01G335800 chr2A 96.791 187 6 0 497 683 259675756 259675942 2.050000e-81 313.0
61 TraesCS5A01G335800 chr3B 90.498 221 15 5 138 355 318290706 318290923 1.240000e-73 287.0
62 TraesCS5A01G335800 chr3B 94.318 176 8 2 182 355 142218915 142219090 4.490000e-68 268.0
63 TraesCS5A01G335800 chr3B 84.848 99 9 6 674 768 557705212 557705308 8.070000e-16 95.3
64 TraesCS5A01G335800 chr1B 89.823 226 16 6 134 355 516774548 516774770 1.600000e-72 283.0
65 TraesCS5A01G335800 chr1B 84.848 99 9 5 674 768 627377869 627377773 8.070000e-16 95.3
66 TraesCS5A01G335800 chr4B 93.011 186 9 4 182 365 15097826 15097643 4.490000e-68 268.0
67 TraesCS5A01G335800 chr4B 84.536 97 9 6 674 766 668352466 668352372 1.040000e-14 91.6
68 TraesCS5A01G335800 chr7B 93.182 176 10 2 182 355 3651846 3652021 9.720000e-65 257.0
69 TraesCS5A01G335800 chr7B 84.848 99 9 6 674 768 715343887 715343791 8.070000e-16 95.3
70 TraesCS5A01G335800 chrUn 83.838 99 10 5 674 768 264981316 264981412 3.750000e-14 89.8
71 TraesCS5A01G335800 chrUn 83.838 99 10 5 674 768 356709576 356709480 3.750000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G335800 chr5A 544898008 544900744 2736 False 5055.000000 5055 100.000000 1 2737 1 chr5A.!!$F5 2736
1 TraesCS5A01G335800 chr5A 384021034 384021724 690 False 972.000000 972 92.063000 1576 2267 1 chr5A.!!$F4 691
2 TraesCS5A01G335800 chr5A 242468401 242469204 803 True 732.000000 732 83.171000 725 1541 1 chr5A.!!$R1 816
3 TraesCS5A01G335800 chr4A 24458065 24460190 2125 False 1100.500000 1890 92.883000 1 2268 2 chr4A.!!$F4 2267
4 TraesCS5A01G335800 chr4A 677758856 677759813 957 True 852.000000 852 82.924000 810 1817 1 chr4A.!!$R2 1007
5 TraesCS5A01G335800 chr4A 490341776 490342576 800 False 761.000000 761 84.146000 810 1613 1 chr4A.!!$F1 803
6 TraesCS5A01G335800 chr3D 571758733 571760202 1469 True 1799.000000 1799 88.911000 810 2277 1 chr3D.!!$R1 1467
7 TraesCS5A01G335800 chr2D 648988700 648990159 1459 False 941.000000 1760 92.943000 622 2085 2 chr2D.!!$F1 1463
8 TraesCS5A01G335800 chr2B 124025213 124026918 1705 True 998.000000 1729 91.163500 182 2268 2 chr2B.!!$R2 2086
9 TraesCS5A01G335800 chr2B 129818036 129818764 728 False 673.000000 673 83.743000 898 1611 1 chr2B.!!$F1 713
10 TraesCS5A01G335800 chr4D 225339491 225340863 1372 True 1690.000000 1690 89.074000 723 2085 1 chr4D.!!$R1 1362
11 TraesCS5A01G335800 chr4D 410839416 410840797 1381 False 1581.000000 1581 87.688000 723 2085 1 chr4D.!!$F1 1362
12 TraesCS5A01G335800 chr4D 239800124 239800773 649 True 837.000000 837 89.908000 1376 2027 1 chr4D.!!$R2 651
13 TraesCS5A01G335800 chr5D 20269681 20270736 1055 True 1219.000000 1219 87.687000 1212 2268 1 chr5D.!!$R1 1056
14 TraesCS5A01G335800 chr5D 161436678 161437847 1169 True 972.000000 972 81.864000 723 1912 1 chr5D.!!$R2 1189
15 TraesCS5A01G335800 chr5D 384519316 384519897 581 True 303.966667 545 94.716667 1 683 3 chr5D.!!$R4 682
16 TraesCS5A01G335800 chr5D 313520613 313521242 629 True 252.900000 453 92.662250 1 683 4 chr5D.!!$R3 682
17 TraesCS5A01G335800 chr5B 189704393 189706073 1680 False 875.500000 1206 89.695000 1 1908 2 chr5B.!!$F2 1907
18 TraesCS5A01G335800 chr6B 425132299 425133218 919 False 1155.000000 1155 89.514000 1355 2267 1 chr6B.!!$F1 912
19 TraesCS5A01G335800 chr7D 152034793 152036089 1296 True 703.500000 1146 89.968500 182 1889 2 chr7D.!!$R3 1707
20 TraesCS5A01G335800 chr7A 220992640 220995139 2499 False 621.000000 1066 92.837500 574 2277 2 chr7A.!!$F1 1703
21 TraesCS5A01G335800 chr6D 202663511 202664312 801 False 928.000000 928 87.715000 810 1611 1 chr6D.!!$F1 801
22 TraesCS5A01G335800 chr6D 446392103 446392684 581 True 302.933333 540 94.683000 1 683 3 chr6D.!!$R1 682
23 TraesCS5A01G335800 chr1D 348147056 348147925 869 True 917.000000 917 85.698000 971 1848 1 chr1D.!!$R1 877
24 TraesCS5A01G335800 chr1D 463801481 463802017 536 True 373.500000 449 96.858500 1 636 2 chr1D.!!$R2 635

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
445 675 0.255890 ACGCAAAGGGGCAGATATGT 59.744 50.0 0.00 0.00 0.0 2.29 F
827 2358 0.694771 AAGAAGTGAGATGGCCAGCA 59.305 50.0 25.38 12.78 0.0 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1297 2829 0.169009 TCTGTGCGAGACGATGTCAG 59.831 55.0 0.0 0.0 34.6 3.51 R
2584 4590 0.320374 TGTTAGGGTTGAGGTCTGCG 59.680 55.0 0.0 0.0 0.0 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
209 438 3.703556 TGGGTGTTGTTGATGTTGATGTT 59.296 39.130 0.00 0.00 0.00 2.71
237 466 3.452627 TCTTCTTCTACTCATTGCCCCTC 59.547 47.826 0.00 0.00 0.00 4.30
247 477 0.769873 ATTGCCCCTCTGCCAGATAG 59.230 55.000 0.00 0.00 0.00 2.08
253 483 2.158385 CCCCTCTGCCAGATAGAGTAGT 60.158 54.545 0.00 0.00 40.00 2.73
271 501 4.641989 AGTAGTAGCAAATTGAGGCCATTG 59.358 41.667 5.01 3.14 0.00 2.82
290 520 7.762382 GCCATTGCCATTTATAGTAGTATTCC 58.238 38.462 0.00 0.00 0.00 3.01
313 543 2.203480 GAGGCCCTGGCAAACACA 60.203 61.111 10.86 0.00 44.11 3.72
323 553 4.462483 CCCTGGCAAACACATGTAGTAAAT 59.538 41.667 0.00 0.00 0.00 1.40
324 554 5.650266 CCCTGGCAAACACATGTAGTAAATA 59.350 40.000 0.00 0.00 0.00 1.40
325 555 6.321181 CCCTGGCAAACACATGTAGTAAATAT 59.679 38.462 0.00 0.00 0.00 1.28
326 556 7.147915 CCCTGGCAAACACATGTAGTAAATATT 60.148 37.037 0.00 0.00 0.00 1.28
327 557 7.915397 CCTGGCAAACACATGTAGTAAATATTC 59.085 37.037 0.00 0.00 0.00 1.75
328 558 8.574251 TGGCAAACACATGTAGTAAATATTCT 57.426 30.769 0.00 0.00 0.00 2.40
329 559 9.674068 TGGCAAACACATGTAGTAAATATTCTA 57.326 29.630 0.00 0.00 0.00 2.10
330 560 9.931210 GGCAAACACATGTAGTAAATATTCTAC 57.069 33.333 0.00 7.17 37.58 2.59
331 561 9.931210 GCAAACACATGTAGTAAATATTCTACC 57.069 33.333 0.00 0.00 36.63 3.18
358 588 8.865590 TTTTTAAGTGCTTGTTTCCTATGTTC 57.134 30.769 0.00 0.00 0.00 3.18
359 589 7.817418 TTTAAGTGCTTGTTTCCTATGTTCT 57.183 32.000 0.00 0.00 0.00 3.01
360 590 5.948992 AAGTGCTTGTTTCCTATGTTCTC 57.051 39.130 0.00 0.00 0.00 2.87
361 591 4.973168 AGTGCTTGTTTCCTATGTTCTCA 58.027 39.130 0.00 0.00 0.00 3.27
362 592 5.564550 AGTGCTTGTTTCCTATGTTCTCAT 58.435 37.500 0.00 0.00 38.00 2.90
363 593 5.645497 AGTGCTTGTTTCCTATGTTCTCATC 59.355 40.000 0.00 0.00 35.70 2.92
364 594 4.943705 TGCTTGTTTCCTATGTTCTCATCC 59.056 41.667 0.00 0.00 35.70 3.51
365 595 4.943705 GCTTGTTTCCTATGTTCTCATCCA 59.056 41.667 0.00 0.00 35.70 3.41
366 596 5.415701 GCTTGTTTCCTATGTTCTCATCCAA 59.584 40.000 0.00 0.00 35.70 3.53
367 597 6.623767 GCTTGTTTCCTATGTTCTCATCCAAC 60.624 42.308 0.00 0.00 35.70 3.77
368 598 6.126863 TGTTTCCTATGTTCTCATCCAACT 57.873 37.500 0.00 0.00 35.70 3.16
369 599 6.542821 TGTTTCCTATGTTCTCATCCAACTT 58.457 36.000 0.00 0.00 35.70 2.66
370 600 6.430925 TGTTTCCTATGTTCTCATCCAACTTG 59.569 38.462 0.00 0.00 35.70 3.16
371 601 5.102953 TCCTATGTTCTCATCCAACTTGG 57.897 43.478 0.74 0.74 39.43 3.61
372 602 3.629398 CCTATGTTCTCATCCAACTTGGC 59.371 47.826 2.52 0.00 37.47 4.52
373 603 2.957402 TGTTCTCATCCAACTTGGCT 57.043 45.000 2.52 0.00 37.47 4.75
374 604 2.783135 TGTTCTCATCCAACTTGGCTC 58.217 47.619 2.52 0.00 37.47 4.70
375 605 2.373169 TGTTCTCATCCAACTTGGCTCT 59.627 45.455 2.52 0.00 37.47 4.09
376 606 3.582647 TGTTCTCATCCAACTTGGCTCTA 59.417 43.478 2.52 0.00 37.47 2.43
377 607 4.041567 TGTTCTCATCCAACTTGGCTCTAA 59.958 41.667 2.52 0.00 37.47 2.10
378 608 4.207891 TCTCATCCAACTTGGCTCTAAC 57.792 45.455 2.52 0.00 37.47 2.34
379 609 3.582647 TCTCATCCAACTTGGCTCTAACA 59.417 43.478 2.52 0.00 37.47 2.41
380 610 3.674997 TCATCCAACTTGGCTCTAACAC 58.325 45.455 2.52 0.00 37.47 3.32
381 611 3.327757 TCATCCAACTTGGCTCTAACACT 59.672 43.478 2.52 0.00 37.47 3.55
382 612 4.530553 TCATCCAACTTGGCTCTAACACTA 59.469 41.667 2.52 0.00 37.47 2.74
383 613 4.537135 TCCAACTTGGCTCTAACACTAG 57.463 45.455 2.52 0.00 37.47 2.57
384 614 3.901844 TCCAACTTGGCTCTAACACTAGT 59.098 43.478 2.52 0.00 37.47 2.57
385 615 5.081728 TCCAACTTGGCTCTAACACTAGTA 58.918 41.667 2.52 0.00 37.47 1.82
386 616 5.541101 TCCAACTTGGCTCTAACACTAGTAA 59.459 40.000 2.52 0.00 37.47 2.24
387 617 5.869888 CCAACTTGGCTCTAACACTAGTAAG 59.130 44.000 0.00 0.00 0.00 2.34
388 618 6.295123 CCAACTTGGCTCTAACACTAGTAAGA 60.295 42.308 0.00 0.00 0.00 2.10
389 619 7.324178 CAACTTGGCTCTAACACTAGTAAGAT 58.676 38.462 0.00 0.00 0.00 2.40
390 620 7.102847 ACTTGGCTCTAACACTAGTAAGATC 57.897 40.000 0.00 0.00 0.00 2.75
391 621 6.663953 ACTTGGCTCTAACACTAGTAAGATCA 59.336 38.462 0.00 0.00 0.00 2.92
392 622 6.701145 TGGCTCTAACACTAGTAAGATCAG 57.299 41.667 0.00 0.00 0.00 2.90
393 623 6.424032 TGGCTCTAACACTAGTAAGATCAGA 58.576 40.000 0.00 0.00 0.00 3.27
394 624 6.319152 TGGCTCTAACACTAGTAAGATCAGAC 59.681 42.308 0.00 0.00 0.00 3.51
395 625 6.544564 GGCTCTAACACTAGTAAGATCAGACT 59.455 42.308 0.00 0.00 0.00 3.24
396 626 7.255001 GGCTCTAACACTAGTAAGATCAGACTC 60.255 44.444 0.00 0.00 0.00 3.36
397 627 7.281324 GCTCTAACACTAGTAAGATCAGACTCA 59.719 40.741 0.00 0.00 0.00 3.41
398 628 9.337396 CTCTAACACTAGTAAGATCAGACTCAT 57.663 37.037 0.00 0.00 0.00 2.90
402 632 9.860650 AACACTAGTAAGATCAGACTCATATCT 57.139 33.333 0.00 0.00 0.00 1.98
403 633 9.860650 ACACTAGTAAGATCAGACTCATATCTT 57.139 33.333 0.00 9.58 41.57 2.40
405 635 9.515226 ACTAGTAAGATCAGACTCATATCTTCC 57.485 37.037 0.00 0.77 39.85 3.46
406 636 7.775053 AGTAAGATCAGACTCATATCTTCCC 57.225 40.000 8.44 3.65 39.85 3.97
407 637 7.301420 AGTAAGATCAGACTCATATCTTCCCA 58.699 38.462 8.44 0.00 39.85 4.37
408 638 7.955185 AGTAAGATCAGACTCATATCTTCCCAT 59.045 37.037 8.44 0.00 39.85 4.00
409 639 9.249053 GTAAGATCAGACTCATATCTTCCCATA 57.751 37.037 8.44 0.00 39.85 2.74
410 640 8.914213 AAGATCAGACTCATATCTTCCCATAT 57.086 34.615 0.00 0.00 35.55 1.78
411 641 8.308851 AGATCAGACTCATATCTTCCCATATG 57.691 38.462 0.00 0.00 37.88 1.78
412 642 6.864151 TCAGACTCATATCTTCCCATATGG 57.136 41.667 15.41 15.41 37.35 2.74
413 643 6.326161 TCAGACTCATATCTTCCCATATGGT 58.674 40.000 20.46 4.03 37.35 3.55
414 644 6.789457 TCAGACTCATATCTTCCCATATGGTT 59.211 38.462 20.46 2.79 37.35 3.67
415 645 7.038729 TCAGACTCATATCTTCCCATATGGTTC 60.039 40.741 20.46 0.00 37.35 3.62
416 646 6.789457 AGACTCATATCTTCCCATATGGTTCA 59.211 38.462 20.46 1.09 37.35 3.18
417 647 7.460402 AGACTCATATCTTCCCATATGGTTCAT 59.540 37.037 20.46 9.03 37.35 2.57
418 648 7.993416 ACTCATATCTTCCCATATGGTTCATT 58.007 34.615 20.46 5.16 37.35 2.57
419 649 8.451245 ACTCATATCTTCCCATATGGTTCATTT 58.549 33.333 20.46 3.65 37.35 2.32
420 650 9.964354 CTCATATCTTCCCATATGGTTCATTTA 57.036 33.333 20.46 5.66 37.35 1.40
428 658 9.884636 TTCCCATATGGTTCATTTATAGATACG 57.115 33.333 20.46 0.00 34.77 3.06
429 659 7.985184 TCCCATATGGTTCATTTATAGATACGC 59.015 37.037 20.46 0.00 34.77 4.42
430 660 7.768582 CCCATATGGTTCATTTATAGATACGCA 59.231 37.037 20.46 0.00 0.00 5.24
431 661 9.161629 CCATATGGTTCATTTATAGATACGCAA 57.838 33.333 14.09 0.00 0.00 4.85
434 664 7.490962 TGGTTCATTTATAGATACGCAAAGG 57.509 36.000 0.00 0.00 0.00 3.11
435 665 6.485313 TGGTTCATTTATAGATACGCAAAGGG 59.515 38.462 0.00 0.00 0.00 3.95
436 666 6.072673 GGTTCATTTATAGATACGCAAAGGGG 60.073 42.308 0.00 0.00 0.00 4.79
437 667 5.001232 TCATTTATAGATACGCAAAGGGGC 58.999 41.667 0.00 0.00 0.00 5.80
438 668 4.425180 TTTATAGATACGCAAAGGGGCA 57.575 40.909 0.00 0.00 0.00 5.36
439 669 2.550830 ATAGATACGCAAAGGGGCAG 57.449 50.000 0.00 0.00 0.00 4.85
440 670 1.491668 TAGATACGCAAAGGGGCAGA 58.508 50.000 0.00 0.00 0.00 4.26
441 671 0.839946 AGATACGCAAAGGGGCAGAT 59.160 50.000 0.00 0.00 0.00 2.90
442 672 2.047061 AGATACGCAAAGGGGCAGATA 58.953 47.619 0.00 0.00 0.00 1.98
443 673 2.639839 AGATACGCAAAGGGGCAGATAT 59.360 45.455 0.00 0.00 0.00 1.63
444 674 2.254546 TACGCAAAGGGGCAGATATG 57.745 50.000 0.00 0.00 0.00 1.78
445 675 0.255890 ACGCAAAGGGGCAGATATGT 59.744 50.000 0.00 0.00 0.00 2.29
446 676 1.340991 ACGCAAAGGGGCAGATATGTT 60.341 47.619 0.00 0.00 0.00 2.71
447 677 1.334869 CGCAAAGGGGCAGATATGTTC 59.665 52.381 0.00 0.00 0.00 3.18
448 678 2.378038 GCAAAGGGGCAGATATGTTCA 58.622 47.619 0.00 0.00 0.00 3.18
449 679 2.961062 GCAAAGGGGCAGATATGTTCAT 59.039 45.455 0.00 0.00 0.00 2.57
450 680 4.144297 GCAAAGGGGCAGATATGTTCATA 58.856 43.478 0.00 0.00 0.00 2.15
451 681 4.768968 GCAAAGGGGCAGATATGTTCATAT 59.231 41.667 5.17 5.17 0.00 1.78
452 682 5.945784 GCAAAGGGGCAGATATGTTCATATA 59.054 40.000 5.45 0.00 0.00 0.86
453 683 6.604795 GCAAAGGGGCAGATATGTTCATATAT 59.395 38.462 5.45 0.45 0.00 0.86
454 684 7.415989 GCAAAGGGGCAGATATGTTCATATATG 60.416 40.741 17.68 17.68 0.00 1.78
455 685 6.898171 AGGGGCAGATATGTTCATATATGT 57.102 37.500 20.81 6.11 30.66 2.29
456 686 7.276088 AGGGGCAGATATGTTCATATATGTT 57.724 36.000 20.81 8.49 30.66 2.71
457 687 7.341805 AGGGGCAGATATGTTCATATATGTTC 58.658 38.462 20.81 15.49 30.66 3.18
458 688 7.037370 AGGGGCAGATATGTTCATATATGTTCA 60.037 37.037 20.81 12.32 30.66 3.18
459 689 7.776969 GGGGCAGATATGTTCATATATGTTCAT 59.223 37.037 20.81 20.10 30.66 2.57
460 690 9.182214 GGGCAGATATGTTCATATATGTTCATT 57.818 33.333 20.81 13.45 30.66 2.57
495 725 7.790027 AGATATGTTCATGTAGATATCTGCCC 58.210 38.462 22.98 3.96 36.96 5.36
496 726 5.830799 ATGTTCATGTAGATATCTGCCCA 57.169 39.130 15.79 9.38 0.00 5.36
497 727 5.830799 TGTTCATGTAGATATCTGCCCAT 57.169 39.130 15.79 11.14 0.00 4.00
498 728 6.933514 TGTTCATGTAGATATCTGCCCATA 57.066 37.500 15.79 0.00 0.00 2.74
499 729 7.500629 TGTTCATGTAGATATCTGCCCATAT 57.499 36.000 15.79 0.73 0.00 1.78
500 730 7.333323 TGTTCATGTAGATATCTGCCCATATG 58.667 38.462 15.79 12.72 0.00 1.78
501 731 7.038088 TGTTCATGTAGATATCTGCCCATATGT 60.038 37.037 15.79 0.00 0.00 2.29
502 732 7.500629 TCATGTAGATATCTGCCCATATGTT 57.499 36.000 15.79 0.00 0.00 2.71
503 733 7.333323 TCATGTAGATATCTGCCCATATGTTG 58.667 38.462 15.79 4.78 0.00 3.33
504 734 6.053632 TGTAGATATCTGCCCATATGTTGG 57.946 41.667 15.79 0.00 46.00 3.77
526 756 9.757227 GTTGGATTAGATATGTAGATATCTGCC 57.243 37.037 25.37 22.32 46.96 4.85
527 757 9.492730 TTGGATTAGATATGTAGATATCTGCCA 57.507 33.333 25.37 23.92 46.96 4.92
528 758 9.666191 TGGATTAGATATGTAGATATCTGCCAT 57.334 33.333 25.37 17.34 46.96 4.40
542 772 8.805175 AGATATCTGCCATATCTACATATCTGC 58.195 37.037 3.89 0.00 39.00 4.26
543 773 5.604758 TCTGCCATATCTACATATCTGCC 57.395 43.478 0.00 0.00 0.00 4.85
544 774 4.406972 TCTGCCATATCTACATATCTGCCC 59.593 45.833 0.00 0.00 0.00 5.36
545 775 4.103342 TGCCATATCTACATATCTGCCCA 58.897 43.478 0.00 0.00 0.00 5.36
546 776 4.723285 TGCCATATCTACATATCTGCCCAT 59.277 41.667 0.00 0.00 0.00 4.00
547 777 5.192321 TGCCATATCTACATATCTGCCCATT 59.808 40.000 0.00 0.00 0.00 3.16
548 778 6.125029 GCCATATCTACATATCTGCCCATTT 58.875 40.000 0.00 0.00 0.00 2.32
549 779 7.092489 TGCCATATCTACATATCTGCCCATTTA 60.092 37.037 0.00 0.00 0.00 1.40
550 780 7.941238 GCCATATCTACATATCTGCCCATTTAT 59.059 37.037 0.00 0.00 0.00 1.40
643 873 6.763715 ATGCCTTTTATAGTAGACATGGGA 57.236 37.500 0.00 0.00 0.00 4.37
666 2059 9.102453 GGGAAGATATGGTCCTTTTATAGTAGT 57.898 37.037 0.00 0.00 0.00 2.73
827 2358 0.694771 AAGAAGTGAGATGGCCAGCA 59.305 50.000 25.38 12.78 0.00 4.41
906 2438 9.434275 TGTATATTCAAGACAAGATCTCCCTTA 57.566 33.333 0.00 0.00 36.27 2.69
915 2447 5.538877 ACAAGATCTCCCTTAACCCATCTA 58.461 41.667 0.00 0.00 0.00 1.98
925 2457 8.757307 TCCCTTAACCCATCTATTTATCATCT 57.243 34.615 0.00 0.00 0.00 2.90
935 2467 8.747471 CCATCTATTTATCATCTCTCTGCTGTA 58.253 37.037 0.00 0.00 0.00 2.74
990 2522 2.679996 TCGCTGCAGAGGCTACCA 60.680 61.111 20.43 0.00 41.91 3.25
1023 2555 2.044650 ATGCTTGCTGGCCGTGAT 60.045 55.556 0.00 0.00 0.00 3.06
1230 2762 3.745975 TGAAGATGTTCGACAACACCATC 59.254 43.478 0.00 0.00 45.47 3.51
1257 2789 3.375642 CATGTACTACCAGCACGATGAG 58.624 50.000 0.00 0.00 0.00 2.90
1297 2829 3.169908 ACCTCTCTTCTTCCTGTCCTTC 58.830 50.000 0.00 0.00 0.00 3.46
1300 2832 4.085733 CTCTCTTCTTCCTGTCCTTCTGA 58.914 47.826 0.00 0.00 0.00 3.27
1310 2842 2.181426 GTCCTTCTGACATCGTCTCG 57.819 55.000 0.00 0.00 43.85 4.04
1374 2915 1.195115 GAGCAGTAGTGGGGATGACA 58.805 55.000 0.00 0.00 0.00 3.58
1408 2949 0.814457 GAAGAAGAGGAGCAGAGCGA 59.186 55.000 0.00 0.00 0.00 4.93
1424 2965 2.037053 CGAGGATGACGAGGAGCAT 58.963 57.895 0.00 0.00 0.00 3.79
1613 3526 4.758251 CTCGCGATGGTGGTGGCA 62.758 66.667 10.36 0.00 0.00 4.92
1671 3585 7.546250 CCAATTATGGTAGAGGAGTACATCT 57.454 40.000 0.00 0.00 42.18 2.90
1724 3647 8.748179 TCAGGATGATTAAGGAGAATAAGGAT 57.252 34.615 0.00 0.00 42.56 3.24
1745 3671 7.259161 AGGATAAGAACGAGTGAAGATGTTAC 58.741 38.462 0.00 0.00 0.00 2.50
1759 3689 3.370978 AGATGTTACGAAATCAAGTGGCG 59.629 43.478 0.00 0.00 0.00 5.69
1852 3783 3.988976 AAGTATGACAGTGTCAGCCAT 57.011 42.857 28.54 15.86 46.04 4.40
1919 3919 8.929260 TCATGGATGCTCAAGTATGAATATTT 57.071 30.769 0.00 0.00 34.49 1.40
1964 3964 8.657387 TTCAGTTTGGTTATTGATGGGAATTA 57.343 30.769 0.00 0.00 0.00 1.40
2140 4143 6.882610 AAGTTTCATGCTCAAGTATGACAA 57.117 33.333 9.89 6.12 44.68 3.18
2247 4250 1.889829 TCGGCCGGTTTTTGAAATCAT 59.110 42.857 27.83 0.00 0.00 2.45
2291 4297 4.451629 GAGACCTTTGATACGTCTCCAA 57.548 45.455 0.00 0.00 44.40 3.53
2292 4298 4.174762 GAGACCTTTGATACGTCTCCAAC 58.825 47.826 0.00 0.00 44.40 3.77
2306 4312 6.315274 CGTCTCCAACGTATCTACTTTTTC 57.685 41.667 0.00 0.00 46.42 2.29
2307 4313 6.091437 CGTCTCCAACGTATCTACTTTTTCT 58.909 40.000 0.00 0.00 46.42 2.52
2308 4314 6.250951 CGTCTCCAACGTATCTACTTTTTCTC 59.749 42.308 0.00 0.00 46.42 2.87
2309 4315 7.088905 GTCTCCAACGTATCTACTTTTTCTCA 58.911 38.462 0.00 0.00 0.00 3.27
2310 4316 7.760340 GTCTCCAACGTATCTACTTTTTCTCAT 59.240 37.037 0.00 0.00 0.00 2.90
2311 4317 7.759886 TCTCCAACGTATCTACTTTTTCTCATG 59.240 37.037 0.00 0.00 0.00 3.07
2312 4318 6.312918 TCCAACGTATCTACTTTTTCTCATGC 59.687 38.462 0.00 0.00 0.00 4.06
2313 4319 6.313905 CCAACGTATCTACTTTTTCTCATGCT 59.686 38.462 0.00 0.00 0.00 3.79
2314 4320 7.148407 CCAACGTATCTACTTTTTCTCATGCTT 60.148 37.037 0.00 0.00 0.00 3.91
2315 4321 7.907214 ACGTATCTACTTTTTCTCATGCTTT 57.093 32.000 0.00 0.00 0.00 3.51
2316 4322 8.324163 ACGTATCTACTTTTTCTCATGCTTTT 57.676 30.769 0.00 0.00 0.00 2.27
2317 4323 8.443937 ACGTATCTACTTTTTCTCATGCTTTTC 58.556 33.333 0.00 0.00 0.00 2.29
2318 4324 7.905493 CGTATCTACTTTTTCTCATGCTTTTCC 59.095 37.037 0.00 0.00 0.00 3.13
2319 4325 8.951243 GTATCTACTTTTTCTCATGCTTTTCCT 58.049 33.333 0.00 0.00 0.00 3.36
2320 4326 7.440523 TCTACTTTTTCTCATGCTTTTCCTC 57.559 36.000 0.00 0.00 0.00 3.71
2321 4327 7.227156 TCTACTTTTTCTCATGCTTTTCCTCT 58.773 34.615 0.00 0.00 0.00 3.69
2322 4328 6.721704 ACTTTTTCTCATGCTTTTCCTCTT 57.278 33.333 0.00 0.00 0.00 2.85
2323 4329 6.510536 ACTTTTTCTCATGCTTTTCCTCTTG 58.489 36.000 0.00 0.00 0.00 3.02
2324 4330 6.097412 ACTTTTTCTCATGCTTTTCCTCTTGT 59.903 34.615 0.00 0.00 0.00 3.16
2325 4331 6.469782 TTTTCTCATGCTTTTCCTCTTGTT 57.530 33.333 0.00 0.00 0.00 2.83
2326 4332 6.469782 TTTCTCATGCTTTTCCTCTTGTTT 57.530 33.333 0.00 0.00 0.00 2.83
2327 4333 6.469782 TTCTCATGCTTTTCCTCTTGTTTT 57.530 33.333 0.00 0.00 0.00 2.43
2328 4334 5.835257 TCTCATGCTTTTCCTCTTGTTTTG 58.165 37.500 0.00 0.00 0.00 2.44
2329 4335 4.947645 TCATGCTTTTCCTCTTGTTTTGG 58.052 39.130 0.00 0.00 0.00 3.28
2330 4336 4.648762 TCATGCTTTTCCTCTTGTTTTGGA 59.351 37.500 0.00 0.00 0.00 3.53
2331 4337 4.385358 TGCTTTTCCTCTTGTTTTGGAC 57.615 40.909 0.00 0.00 0.00 4.02
2332 4338 4.023291 TGCTTTTCCTCTTGTTTTGGACT 58.977 39.130 0.00 0.00 0.00 3.85
2333 4339 4.097892 TGCTTTTCCTCTTGTTTTGGACTC 59.902 41.667 0.00 0.00 0.00 3.36
2334 4340 4.339530 GCTTTTCCTCTTGTTTTGGACTCT 59.660 41.667 0.00 0.00 0.00 3.24
2335 4341 5.531287 GCTTTTCCTCTTGTTTTGGACTCTA 59.469 40.000 0.00 0.00 0.00 2.43
2336 4342 6.039382 GCTTTTCCTCTTGTTTTGGACTCTAA 59.961 38.462 0.00 0.00 0.00 2.10
2337 4343 7.255625 GCTTTTCCTCTTGTTTTGGACTCTAAT 60.256 37.037 0.00 0.00 0.00 1.73
2338 4344 8.533569 TTTTCCTCTTGTTTTGGACTCTAATT 57.466 30.769 0.00 0.00 0.00 1.40
2339 4345 8.533569 TTTCCTCTTGTTTTGGACTCTAATTT 57.466 30.769 0.00 0.00 0.00 1.82
2340 4346 7.510549 TCCTCTTGTTTTGGACTCTAATTTG 57.489 36.000 0.00 0.00 0.00 2.32
2341 4347 6.016276 TCCTCTTGTTTTGGACTCTAATTTGC 60.016 38.462 0.00 0.00 0.00 3.68
2342 4348 6.239008 CCTCTTGTTTTGGACTCTAATTTGCA 60.239 38.462 0.00 0.00 0.00 4.08
2343 4349 7.288810 TCTTGTTTTGGACTCTAATTTGCAT 57.711 32.000 0.00 0.00 0.00 3.96
2344 4350 8.402798 TCTTGTTTTGGACTCTAATTTGCATA 57.597 30.769 0.00 0.00 0.00 3.14
2345 4351 8.855110 TCTTGTTTTGGACTCTAATTTGCATAA 58.145 29.630 0.00 0.00 0.00 1.90
2346 4352 9.643693 CTTGTTTTGGACTCTAATTTGCATAAT 57.356 29.630 0.00 0.00 0.00 1.28
2347 4353 9.995003 TTGTTTTGGACTCTAATTTGCATAATT 57.005 25.926 10.36 10.36 0.00 1.40
2348 4354 9.995003 TGTTTTGGACTCTAATTTGCATAATTT 57.005 25.926 10.66 0.00 0.00 1.82
2371 4377 9.816787 ATTTTAATTAAACTAACCCTGGACTGA 57.183 29.630 10.18 0.00 0.00 3.41
2372 4378 8.625786 TTTAATTAAACTAACCCTGGACTGAC 57.374 34.615 6.54 0.00 0.00 3.51
2373 4379 2.833631 AAACTAACCCTGGACTGACG 57.166 50.000 0.00 0.00 0.00 4.35
2374 4380 1.713297 AACTAACCCTGGACTGACGT 58.287 50.000 0.00 0.00 0.00 4.34
2375 4381 1.713297 ACTAACCCTGGACTGACGTT 58.287 50.000 0.00 0.00 0.00 3.99
2376 4382 1.343465 ACTAACCCTGGACTGACGTTG 59.657 52.381 0.00 0.00 0.00 4.10
2377 4383 1.343465 CTAACCCTGGACTGACGTTGT 59.657 52.381 0.00 0.00 0.00 3.32
2378 4384 0.544697 AACCCTGGACTGACGTTGTT 59.455 50.000 0.00 0.00 0.00 2.83
2379 4385 0.544697 ACCCTGGACTGACGTTGTTT 59.455 50.000 0.00 0.00 0.00 2.83
2380 4386 1.064979 ACCCTGGACTGACGTTGTTTT 60.065 47.619 0.00 0.00 0.00 2.43
2381 4387 1.602377 CCCTGGACTGACGTTGTTTTC 59.398 52.381 0.00 0.00 0.00 2.29
2382 4388 2.285083 CCTGGACTGACGTTGTTTTCA 58.715 47.619 0.00 0.00 0.00 2.69
2383 4389 2.287915 CCTGGACTGACGTTGTTTTCAG 59.712 50.000 0.00 0.00 44.19 3.02
2384 4390 1.668751 TGGACTGACGTTGTTTTCAGC 59.331 47.619 0.00 0.00 42.67 4.26
2385 4391 1.668751 GGACTGACGTTGTTTTCAGCA 59.331 47.619 0.00 0.00 42.67 4.41
2386 4392 2.286418 GGACTGACGTTGTTTTCAGCAG 60.286 50.000 0.00 0.00 42.67 4.24
2387 4393 2.607635 GACTGACGTTGTTTTCAGCAGA 59.392 45.455 0.00 0.00 42.67 4.26
2388 4394 3.006940 ACTGACGTTGTTTTCAGCAGAA 58.993 40.909 0.00 0.00 42.67 3.02
2389 4395 3.181510 ACTGACGTTGTTTTCAGCAGAAC 60.182 43.478 0.00 0.00 42.67 3.01
2390 4396 3.006940 TGACGTTGTTTTCAGCAGAACT 58.993 40.909 0.00 0.00 32.39 3.01
2391 4397 4.185394 TGACGTTGTTTTCAGCAGAACTA 58.815 39.130 0.00 0.00 32.39 2.24
2392 4398 4.033587 TGACGTTGTTTTCAGCAGAACTAC 59.966 41.667 0.00 0.00 32.39 2.73
2393 4399 3.311596 ACGTTGTTTTCAGCAGAACTACC 59.688 43.478 0.00 0.00 32.39 3.18
2394 4400 3.311322 CGTTGTTTTCAGCAGAACTACCA 59.689 43.478 0.00 0.00 32.39 3.25
2395 4401 4.024048 CGTTGTTTTCAGCAGAACTACCAT 60.024 41.667 0.00 0.00 32.39 3.55
2396 4402 5.215160 GTTGTTTTCAGCAGAACTACCATG 58.785 41.667 0.00 0.00 32.39 3.66
2397 4403 3.820467 TGTTTTCAGCAGAACTACCATGG 59.180 43.478 11.19 11.19 32.39 3.66
2398 4404 3.788227 TTTCAGCAGAACTACCATGGT 57.212 42.857 23.55 23.55 32.39 3.55
2399 4405 2.768253 TCAGCAGAACTACCATGGTG 57.232 50.000 28.17 18.63 42.34 4.17
2400 4406 1.977854 TCAGCAGAACTACCATGGTGT 59.022 47.619 28.17 19.28 41.82 4.16
2401 4407 2.371841 TCAGCAGAACTACCATGGTGTT 59.628 45.455 28.17 25.64 41.82 3.32
2402 4408 2.485426 CAGCAGAACTACCATGGTGTTG 59.515 50.000 28.17 18.42 37.59 3.33
2403 4409 1.812571 GCAGAACTACCATGGTGTTGG 59.187 52.381 28.17 20.22 42.82 3.77
2411 4417 1.580815 CCATGGTGTTGGTTTTGTGC 58.419 50.000 2.57 0.00 31.74 4.57
2412 4418 1.134580 CCATGGTGTTGGTTTTGTGCA 60.135 47.619 2.57 0.00 31.74 4.57
2413 4419 2.203401 CATGGTGTTGGTTTTGTGCAG 58.797 47.619 0.00 0.00 0.00 4.41
2414 4420 1.550327 TGGTGTTGGTTTTGTGCAGA 58.450 45.000 0.00 0.00 0.00 4.26
2415 4421 1.895798 TGGTGTTGGTTTTGTGCAGAA 59.104 42.857 0.00 0.00 0.00 3.02
2416 4422 2.300152 TGGTGTTGGTTTTGTGCAGAAA 59.700 40.909 4.66 4.66 0.00 2.52
2417 4423 3.055530 TGGTGTTGGTTTTGTGCAGAAAT 60.056 39.130 10.13 0.00 0.00 2.17
2418 4424 4.160439 TGGTGTTGGTTTTGTGCAGAAATA 59.840 37.500 10.13 0.00 0.00 1.40
2419 4425 5.112686 GGTGTTGGTTTTGTGCAGAAATAA 58.887 37.500 10.13 3.81 0.00 1.40
2420 4426 5.582665 GGTGTTGGTTTTGTGCAGAAATAAA 59.417 36.000 10.13 2.71 0.00 1.40
2421 4427 6.092807 GGTGTTGGTTTTGTGCAGAAATAAAA 59.907 34.615 10.13 2.37 0.00 1.52
2422 4428 6.958752 GTGTTGGTTTTGTGCAGAAATAAAAC 59.041 34.615 10.13 13.66 40.46 2.43
2423 4429 6.876257 TGTTGGTTTTGTGCAGAAATAAAACT 59.124 30.769 10.13 0.00 40.79 2.66
2424 4430 7.389053 TGTTGGTTTTGTGCAGAAATAAAACTT 59.611 29.630 10.13 0.00 40.79 2.66
2425 4431 7.532682 TGGTTTTGTGCAGAAATAAAACTTC 57.467 32.000 10.13 2.50 40.79 3.01
2426 4432 7.327214 TGGTTTTGTGCAGAAATAAAACTTCT 58.673 30.769 10.13 0.00 40.79 2.85
2427 4433 7.821846 TGGTTTTGTGCAGAAATAAAACTTCTT 59.178 29.630 10.13 0.00 40.79 2.52
2428 4434 8.116136 GGTTTTGTGCAGAAATAAAACTTCTTG 58.884 33.333 10.13 0.00 40.79 3.02
2429 4435 7.769272 TTTGTGCAGAAATAAAACTTCTTGG 57.231 32.000 4.66 0.00 30.58 3.61
2430 4436 6.707440 TGTGCAGAAATAAAACTTCTTGGA 57.293 33.333 0.00 0.00 30.58 3.53
2431 4437 7.106439 TGTGCAGAAATAAAACTTCTTGGAA 57.894 32.000 0.00 0.00 30.58 3.53
2432 4438 7.725251 TGTGCAGAAATAAAACTTCTTGGAAT 58.275 30.769 0.00 0.00 30.58 3.01
2433 4439 7.652909 TGTGCAGAAATAAAACTTCTTGGAATG 59.347 33.333 0.00 0.00 30.58 2.67
2434 4440 7.116805 GTGCAGAAATAAAACTTCTTGGAATGG 59.883 37.037 0.00 0.00 30.58 3.16
2435 4441 7.015098 TGCAGAAATAAAACTTCTTGGAATGGA 59.985 33.333 0.00 0.00 30.58 3.41
2436 4442 7.872483 GCAGAAATAAAACTTCTTGGAATGGAA 59.128 33.333 0.00 0.00 30.58 3.53
2437 4443 9.196552 CAGAAATAAAACTTCTTGGAATGGAAC 57.803 33.333 0.00 0.00 30.58 3.62
2438 4444 8.082242 AGAAATAAAACTTCTTGGAATGGAACG 58.918 33.333 0.00 0.00 28.46 3.95
2439 4445 7.519032 AATAAAACTTCTTGGAATGGAACGA 57.481 32.000 0.00 0.00 0.00 3.85
2440 4446 5.845391 AAAACTTCTTGGAATGGAACGAA 57.155 34.783 0.00 0.00 0.00 3.85
2441 4447 5.845391 AAACTTCTTGGAATGGAACGAAA 57.155 34.783 0.00 0.00 0.00 3.46
2442 4448 4.830826 ACTTCTTGGAATGGAACGAAAC 57.169 40.909 0.00 0.00 0.00 2.78
2443 4449 4.461198 ACTTCTTGGAATGGAACGAAACT 58.539 39.130 0.00 0.00 0.00 2.66
2444 4450 4.887655 ACTTCTTGGAATGGAACGAAACTT 59.112 37.500 0.00 0.00 0.00 2.66
2445 4451 5.359860 ACTTCTTGGAATGGAACGAAACTTT 59.640 36.000 0.00 0.00 0.00 2.66
2446 4452 5.845391 TCTTGGAATGGAACGAAACTTTT 57.155 34.783 0.00 0.00 0.00 2.27
2447 4453 6.215495 TCTTGGAATGGAACGAAACTTTTT 57.785 33.333 0.00 0.00 0.00 1.94
2448 4454 6.039616 TCTTGGAATGGAACGAAACTTTTTG 58.960 36.000 0.00 0.00 0.00 2.44
2449 4455 5.584253 TGGAATGGAACGAAACTTTTTGA 57.416 34.783 0.00 0.00 0.00 2.69
2450 4456 5.967088 TGGAATGGAACGAAACTTTTTGAA 58.033 33.333 0.00 0.00 0.00 2.69
2451 4457 6.039616 TGGAATGGAACGAAACTTTTTGAAG 58.960 36.000 0.00 0.00 0.00 3.02
2452 4458 6.127591 TGGAATGGAACGAAACTTTTTGAAGA 60.128 34.615 0.00 0.00 0.00 2.87
2453 4459 6.754675 GGAATGGAACGAAACTTTTTGAAGAA 59.245 34.615 0.00 0.00 0.00 2.52
2454 4460 7.438160 GGAATGGAACGAAACTTTTTGAAGAAT 59.562 33.333 0.00 0.00 0.00 2.40
2455 4461 8.716646 AATGGAACGAAACTTTTTGAAGAATT 57.283 26.923 0.00 0.00 0.00 2.17
2456 4462 8.716646 ATGGAACGAAACTTTTTGAAGAATTT 57.283 26.923 0.00 0.00 0.00 1.82
2457 4463 8.541133 TGGAACGAAACTTTTTGAAGAATTTT 57.459 26.923 0.00 0.00 0.00 1.82
2458 4464 8.994170 TGGAACGAAACTTTTTGAAGAATTTTT 58.006 25.926 0.00 0.00 0.00 1.94
2495 4501 7.591421 AGAATTTCTAGAGCTAAGACCTACC 57.409 40.000 0.00 0.00 0.00 3.18
2496 4502 6.263617 AGAATTTCTAGAGCTAAGACCTACCG 59.736 42.308 0.00 0.00 0.00 4.02
2497 4503 3.488778 TCTAGAGCTAAGACCTACCGG 57.511 52.381 0.00 0.00 0.00 5.28
2498 4504 3.044156 TCTAGAGCTAAGACCTACCGGA 58.956 50.000 9.46 0.00 0.00 5.14
2499 4505 2.351706 AGAGCTAAGACCTACCGGAG 57.648 55.000 9.46 0.28 0.00 4.63
2500 4506 1.845143 AGAGCTAAGACCTACCGGAGA 59.155 52.381 9.46 0.00 0.00 3.71
2501 4507 2.158726 AGAGCTAAGACCTACCGGAGAG 60.159 54.545 9.46 4.54 0.00 3.20
2503 4509 1.984066 CTAAGACCTACCGGAGAGGG 58.016 60.000 24.84 15.61 46.96 4.30
2504 4510 0.554792 TAAGACCTACCGGAGAGGGG 59.445 60.000 24.84 14.14 46.96 4.79
2505 4511 2.838693 GACCTACCGGAGAGGGGC 60.839 72.222 24.84 15.54 46.96 5.80
2506 4512 4.477119 ACCTACCGGAGAGGGGCC 62.477 72.222 24.84 0.00 46.96 5.80
2532 4538 3.694538 GGCACAACCCACCATGGC 61.695 66.667 13.04 0.00 35.79 4.40
2533 4539 2.916703 GCACAACCCACCATGGCA 60.917 61.111 13.04 0.00 35.79 4.92
2534 4540 3.050339 CACAACCCACCATGGCAC 58.950 61.111 13.04 0.00 35.79 5.01
2535 4541 2.597217 ACAACCCACCATGGCACG 60.597 61.111 13.04 0.73 35.79 5.34
2536 4542 4.054825 CAACCCACCATGGCACGC 62.055 66.667 13.04 0.00 35.79 5.34
2598 4604 4.410400 CCCCGCAGACCTCAACCC 62.410 72.222 0.00 0.00 0.00 4.11
2599 4605 3.322466 CCCGCAGACCTCAACCCT 61.322 66.667 0.00 0.00 0.00 4.34
2600 4606 1.987855 CCCGCAGACCTCAACCCTA 60.988 63.158 0.00 0.00 0.00 3.53
2601 4607 1.550130 CCCGCAGACCTCAACCCTAA 61.550 60.000 0.00 0.00 0.00 2.69
2602 4608 0.391263 CCGCAGACCTCAACCCTAAC 60.391 60.000 0.00 0.00 0.00 2.34
2603 4609 0.320374 CGCAGACCTCAACCCTAACA 59.680 55.000 0.00 0.00 0.00 2.41
2604 4610 1.809684 GCAGACCTCAACCCTAACAC 58.190 55.000 0.00 0.00 0.00 3.32
2605 4611 1.348036 GCAGACCTCAACCCTAACACT 59.652 52.381 0.00 0.00 0.00 3.55
2606 4612 2.565834 GCAGACCTCAACCCTAACACTA 59.434 50.000 0.00 0.00 0.00 2.74
2607 4613 3.197983 GCAGACCTCAACCCTAACACTAT 59.802 47.826 0.00 0.00 0.00 2.12
2608 4614 4.404715 GCAGACCTCAACCCTAACACTATA 59.595 45.833 0.00 0.00 0.00 1.31
2609 4615 5.105064 GCAGACCTCAACCCTAACACTATAA 60.105 44.000 0.00 0.00 0.00 0.98
2610 4616 6.575649 GCAGACCTCAACCCTAACACTATAAA 60.576 42.308 0.00 0.00 0.00 1.40
2611 4617 7.565680 CAGACCTCAACCCTAACACTATAAAT 58.434 38.462 0.00 0.00 0.00 1.40
2612 4618 8.047310 CAGACCTCAACCCTAACACTATAAATT 58.953 37.037 0.00 0.00 0.00 1.82
2613 4619 8.265764 AGACCTCAACCCTAACACTATAAATTC 58.734 37.037 0.00 0.00 0.00 2.17
2614 4620 7.344134 ACCTCAACCCTAACACTATAAATTCC 58.656 38.462 0.00 0.00 0.00 3.01
2615 4621 7.184022 ACCTCAACCCTAACACTATAAATTCCT 59.816 37.037 0.00 0.00 0.00 3.36
2616 4622 8.711170 CCTCAACCCTAACACTATAAATTCCTA 58.289 37.037 0.00 0.00 0.00 2.94
2652 4658 8.581253 AAAAATCAGGGAGAAAGAATTATCGT 57.419 30.769 0.00 0.00 0.00 3.73
2653 4659 7.559590 AAATCAGGGAGAAAGAATTATCGTG 57.440 36.000 0.00 0.00 0.00 4.35
2654 4660 5.932619 TCAGGGAGAAAGAATTATCGTGA 57.067 39.130 0.00 0.00 0.00 4.35
2655 4661 6.485830 TCAGGGAGAAAGAATTATCGTGAT 57.514 37.500 0.00 0.00 0.00 3.06
2656 4662 6.516718 TCAGGGAGAAAGAATTATCGTGATC 58.483 40.000 0.00 0.00 0.00 2.92
2657 4663 5.698545 CAGGGAGAAAGAATTATCGTGATCC 59.301 44.000 0.00 0.00 0.00 3.36
2658 4664 5.366768 AGGGAGAAAGAATTATCGTGATCCA 59.633 40.000 0.00 0.00 29.57 3.41
2659 4665 6.043706 AGGGAGAAAGAATTATCGTGATCCAT 59.956 38.462 0.00 0.00 29.57 3.41
2660 4666 6.148480 GGGAGAAAGAATTATCGTGATCCATG 59.852 42.308 0.00 0.00 29.57 3.66
2661 4667 6.931281 GGAGAAAGAATTATCGTGATCCATGA 59.069 38.462 0.00 0.00 33.71 3.07
2662 4668 7.117523 GGAGAAAGAATTATCGTGATCCATGAG 59.882 40.741 0.00 0.00 32.64 2.90
2663 4669 7.730084 AGAAAGAATTATCGTGATCCATGAGA 58.270 34.615 0.00 0.00 32.64 3.27
2664 4670 8.373981 AGAAAGAATTATCGTGATCCATGAGAT 58.626 33.333 0.00 0.00 38.17 2.75
2665 4671 9.645059 GAAAGAATTATCGTGATCCATGAGATA 57.355 33.333 0.00 0.00 34.42 1.98
2666 4672 9.650539 AAAGAATTATCGTGATCCATGAGATAG 57.349 33.333 0.00 0.00 34.42 2.08
2667 4673 8.586879 AGAATTATCGTGATCCATGAGATAGA 57.413 34.615 0.00 0.00 34.42 1.98
2668 4674 8.685427 AGAATTATCGTGATCCATGAGATAGAG 58.315 37.037 0.00 0.00 34.42 2.43
2669 4675 4.717233 ATCGTGATCCATGAGATAGAGC 57.283 45.455 0.00 0.00 34.42 4.09
2670 4676 2.822561 TCGTGATCCATGAGATAGAGCC 59.177 50.000 0.00 0.00 34.42 4.70
2671 4677 2.415224 CGTGATCCATGAGATAGAGCCG 60.415 54.545 0.00 0.00 34.42 5.52
2672 4678 1.547820 TGATCCATGAGATAGAGCCGC 59.452 52.381 0.00 0.00 34.42 6.53
2673 4679 0.901124 ATCCATGAGATAGAGCCGCC 59.099 55.000 0.00 0.00 31.60 6.13
2674 4680 1.080230 CCATGAGATAGAGCCGCCG 60.080 63.158 0.00 0.00 0.00 6.46
2675 4681 1.735920 CATGAGATAGAGCCGCCGC 60.736 63.158 0.00 0.00 0.00 6.53
2676 4682 2.936912 ATGAGATAGAGCCGCCGCC 61.937 63.158 0.00 0.00 34.57 6.13
2677 4683 3.606662 GAGATAGAGCCGCCGCCA 61.607 66.667 0.00 0.00 34.57 5.69
2678 4684 3.151958 GAGATAGAGCCGCCGCCAA 62.152 63.158 0.00 0.00 34.57 4.52
2679 4685 2.663188 GATAGAGCCGCCGCCAAG 60.663 66.667 0.00 0.00 34.57 3.61
2680 4686 4.918201 ATAGAGCCGCCGCCAAGC 62.918 66.667 0.00 0.00 34.57 4.01
2689 4695 2.282462 CCGCCAAGCCCTGTTCTT 60.282 61.111 0.00 0.00 0.00 2.52
2690 4696 2.335712 CCGCCAAGCCCTGTTCTTC 61.336 63.158 0.00 0.00 0.00 2.87
2691 4697 2.335712 CGCCAAGCCCTGTTCTTCC 61.336 63.158 0.00 0.00 0.00 3.46
2692 4698 1.075659 GCCAAGCCCTGTTCTTCCT 59.924 57.895 0.00 0.00 0.00 3.36
2693 4699 0.540597 GCCAAGCCCTGTTCTTCCTT 60.541 55.000 0.00 0.00 0.00 3.36
2694 4700 1.251251 CCAAGCCCTGTTCTTCCTTG 58.749 55.000 0.00 0.00 34.26 3.61
2695 4701 1.251251 CAAGCCCTGTTCTTCCTTGG 58.749 55.000 0.00 0.00 31.65 3.61
2696 4702 0.540597 AAGCCCTGTTCTTCCTTGGC 60.541 55.000 0.00 0.00 39.17 4.52
2697 4703 1.228552 GCCCTGTTCTTCCTTGGCA 60.229 57.895 0.00 0.00 38.73 4.92
2698 4704 0.827507 GCCCTGTTCTTCCTTGGCAA 60.828 55.000 0.00 0.00 38.73 4.52
2699 4705 1.251251 CCCTGTTCTTCCTTGGCAAG 58.749 55.000 20.31 20.31 0.00 4.01
2704 4710 0.478072 TTCTTCCTTGGCAAGGCAGA 59.522 50.000 34.98 34.98 46.96 4.26
2705 4711 0.700564 TCTTCCTTGGCAAGGCAGAT 59.299 50.000 34.98 0.00 44.40 2.90
2706 4712 1.340405 TCTTCCTTGGCAAGGCAGATC 60.340 52.381 34.98 0.00 44.40 2.75
2707 4713 3.693788 TCTTCCTTGGCAAGGCAGATCT 61.694 50.000 34.98 0.00 44.40 2.75
2708 4714 4.396333 TCTTCCTTGGCAAGGCAGATCTA 61.396 47.826 34.98 19.44 44.40 1.98
2709 4715 1.964552 CCTTGGCAAGGCAGATCTAG 58.035 55.000 31.72 6.65 42.78 2.43
2710 4716 1.487976 CCTTGGCAAGGCAGATCTAGA 59.512 52.381 31.72 0.00 42.78 2.43
2711 4717 2.485124 CCTTGGCAAGGCAGATCTAGAG 60.485 54.545 31.72 5.38 42.78 2.43
2712 4718 1.871418 TGGCAAGGCAGATCTAGAGT 58.129 50.000 0.00 0.00 0.00 3.24
2713 4719 1.759445 TGGCAAGGCAGATCTAGAGTC 59.241 52.381 0.00 0.00 0.00 3.36
2714 4720 1.069978 GGCAAGGCAGATCTAGAGTCC 59.930 57.143 0.00 0.00 0.00 3.85
2715 4721 1.269517 GCAAGGCAGATCTAGAGTCCG 60.270 57.143 0.00 0.00 0.00 4.79
2716 4722 2.028130 CAAGGCAGATCTAGAGTCCGT 58.972 52.381 0.00 0.00 0.00 4.69
2717 4723 2.428890 CAAGGCAGATCTAGAGTCCGTT 59.571 50.000 0.00 0.00 0.00 4.44
2718 4724 2.741145 AGGCAGATCTAGAGTCCGTTT 58.259 47.619 0.00 0.00 0.00 3.60
2719 4725 2.428890 AGGCAGATCTAGAGTCCGTTTG 59.571 50.000 0.00 0.00 0.00 2.93
2720 4726 2.482142 GGCAGATCTAGAGTCCGTTTGG 60.482 54.545 0.00 0.00 0.00 3.28
2721 4727 2.427453 GCAGATCTAGAGTCCGTTTGGA 59.573 50.000 0.00 0.00 43.88 3.53
2729 4735 2.602267 TCCGTTTGGAGCTCCGGA 60.602 61.111 27.43 24.90 46.44 5.14
2730 4736 2.125512 CCGTTTGGAGCTCCGGAG 60.126 66.667 27.83 27.83 43.01 4.63
2731 4737 2.646175 CCGTTTGGAGCTCCGGAGA 61.646 63.158 35.69 11.50 43.01 3.71
2732 4738 1.153745 CGTTTGGAGCTCCGGAGAG 60.154 63.158 35.69 11.46 43.57 3.20
2733 4739 1.219393 GTTTGGAGCTCCGGAGAGG 59.781 63.158 35.69 10.61 40.79 3.69
2734 4740 1.990060 TTTGGAGCTCCGGAGAGGG 60.990 63.158 35.69 10.19 40.79 4.30
2735 4741 3.984186 TTGGAGCTCCGGAGAGGGG 62.984 68.421 35.69 9.75 45.86 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 132 5.330455 TGGCAAAAACATCAACAACACTA 57.670 34.783 0.00 0.00 0.00 2.74
209 438 5.877012 GGCAATGAGTAGAAGAAGAACATCA 59.123 40.000 0.00 0.00 0.00 3.07
237 466 5.521906 TTTGCTACTACTCTATCTGGCAG 57.478 43.478 8.58 8.58 0.00 4.85
247 477 3.873910 TGGCCTCAATTTGCTACTACTC 58.126 45.455 3.32 0.00 0.00 2.59
253 483 2.965572 GCAATGGCCTCAATTTGCTA 57.034 45.000 3.32 0.00 40.90 3.49
283 513 3.628257 CCAGGGCCTCAATTTGGAATACT 60.628 47.826 0.95 0.00 0.00 2.12
290 520 0.686224 TTTGCCAGGGCCTCAATTTG 59.314 50.000 0.95 0.00 41.09 2.32
333 563 8.691797 AGAACATAGGAAACAAGCACTTAAAAA 58.308 29.630 0.00 0.00 0.00 1.94
334 564 8.232913 AGAACATAGGAAACAAGCACTTAAAA 57.767 30.769 0.00 0.00 0.00 1.52
335 565 7.500892 TGAGAACATAGGAAACAAGCACTTAAA 59.499 33.333 0.00 0.00 0.00 1.52
336 566 6.995686 TGAGAACATAGGAAACAAGCACTTAA 59.004 34.615 0.00 0.00 0.00 1.85
337 567 6.530120 TGAGAACATAGGAAACAAGCACTTA 58.470 36.000 0.00 0.00 0.00 2.24
338 568 5.376625 TGAGAACATAGGAAACAAGCACTT 58.623 37.500 0.00 0.00 0.00 3.16
339 569 4.973168 TGAGAACATAGGAAACAAGCACT 58.027 39.130 0.00 0.00 0.00 4.40
340 570 5.163713 GGATGAGAACATAGGAAACAAGCAC 60.164 44.000 0.00 0.00 36.82 4.40
341 571 4.943705 GGATGAGAACATAGGAAACAAGCA 59.056 41.667 0.00 0.00 36.82 3.91
342 572 4.943705 TGGATGAGAACATAGGAAACAAGC 59.056 41.667 0.00 0.00 36.82 4.01
343 573 6.656693 AGTTGGATGAGAACATAGGAAACAAG 59.343 38.462 0.00 0.00 36.82 3.16
344 574 6.542821 AGTTGGATGAGAACATAGGAAACAA 58.457 36.000 0.00 0.00 36.82 2.83
345 575 6.126863 AGTTGGATGAGAACATAGGAAACA 57.873 37.500 0.00 0.00 36.82 2.83
346 576 6.127897 CCAAGTTGGATGAGAACATAGGAAAC 60.128 42.308 17.60 0.00 40.96 2.78
347 577 5.945784 CCAAGTTGGATGAGAACATAGGAAA 59.054 40.000 17.60 0.00 40.96 3.13
348 578 5.500234 CCAAGTTGGATGAGAACATAGGAA 58.500 41.667 17.60 0.00 40.96 3.36
349 579 4.626287 GCCAAGTTGGATGAGAACATAGGA 60.626 45.833 26.52 0.00 40.96 2.94
350 580 3.629398 GCCAAGTTGGATGAGAACATAGG 59.371 47.826 26.52 0.00 40.96 2.57
351 581 4.521146 AGCCAAGTTGGATGAGAACATAG 58.479 43.478 26.52 0.00 40.96 2.23
352 582 4.225942 AGAGCCAAGTTGGATGAGAACATA 59.774 41.667 26.52 0.00 35.51 2.29
353 583 3.009916 AGAGCCAAGTTGGATGAGAACAT 59.990 43.478 26.52 0.00 35.51 2.71
354 584 2.373169 AGAGCCAAGTTGGATGAGAACA 59.627 45.455 26.52 0.00 35.51 3.18
355 585 3.064900 AGAGCCAAGTTGGATGAGAAC 57.935 47.619 26.52 6.89 35.51 3.01
356 586 4.041567 TGTTAGAGCCAAGTTGGATGAGAA 59.958 41.667 26.52 9.73 35.51 2.87
357 587 3.582647 TGTTAGAGCCAAGTTGGATGAGA 59.417 43.478 26.52 3.56 35.51 3.27
358 588 3.686726 GTGTTAGAGCCAAGTTGGATGAG 59.313 47.826 26.52 0.00 35.51 2.90
359 589 3.327757 AGTGTTAGAGCCAAGTTGGATGA 59.672 43.478 26.52 6.67 35.51 2.92
360 590 3.679389 AGTGTTAGAGCCAAGTTGGATG 58.321 45.455 26.52 0.00 35.51 3.51
361 591 4.532521 ACTAGTGTTAGAGCCAAGTTGGAT 59.467 41.667 26.52 20.68 39.95 3.41
362 592 3.901844 ACTAGTGTTAGAGCCAAGTTGGA 59.098 43.478 26.52 0.88 40.96 3.53
363 593 4.273148 ACTAGTGTTAGAGCCAAGTTGG 57.727 45.455 18.17 18.17 41.55 3.77
364 594 6.688578 TCTTACTAGTGTTAGAGCCAAGTTG 58.311 40.000 5.39 0.00 29.76 3.16
365 595 6.912951 TCTTACTAGTGTTAGAGCCAAGTT 57.087 37.500 5.39 0.00 29.76 2.66
366 596 6.663953 TGATCTTACTAGTGTTAGAGCCAAGT 59.336 38.462 5.39 0.00 37.42 3.16
367 597 7.067615 TCTGATCTTACTAGTGTTAGAGCCAAG 59.932 40.741 5.39 3.81 37.42 3.61
368 598 6.890268 TCTGATCTTACTAGTGTTAGAGCCAA 59.110 38.462 5.39 0.00 37.42 4.52
369 599 6.319152 GTCTGATCTTACTAGTGTTAGAGCCA 59.681 42.308 5.39 7.22 37.42 4.75
370 600 6.544564 AGTCTGATCTTACTAGTGTTAGAGCC 59.455 42.308 5.39 3.45 37.42 4.70
371 601 7.281324 TGAGTCTGATCTTACTAGTGTTAGAGC 59.719 40.741 5.39 8.92 38.32 4.09
372 602 8.725405 TGAGTCTGATCTTACTAGTGTTAGAG 57.275 38.462 5.39 0.00 35.66 2.43
376 606 9.860650 AGATATGAGTCTGATCTTACTAGTGTT 57.139 33.333 5.39 0.00 0.00 3.32
377 607 9.860650 AAGATATGAGTCTGATCTTACTAGTGT 57.139 33.333 5.39 0.00 37.99 3.55
379 609 9.515226 GGAAGATATGAGTCTGATCTTACTAGT 57.485 37.037 16.64 0.00 39.46 2.57
380 610 8.956426 GGGAAGATATGAGTCTGATCTTACTAG 58.044 40.741 20.37 0.00 39.53 2.57
381 611 8.448816 TGGGAAGATATGAGTCTGATCTTACTA 58.551 37.037 20.37 15.53 39.53 1.82
382 612 7.301420 TGGGAAGATATGAGTCTGATCTTACT 58.699 38.462 20.37 0.00 39.53 2.24
383 613 7.531857 TGGGAAGATATGAGTCTGATCTTAC 57.468 40.000 16.03 16.03 39.46 2.34
385 615 8.760735 CATATGGGAAGATATGAGTCTGATCTT 58.239 37.037 15.73 15.73 41.51 2.40
386 616 7.345132 CCATATGGGAAGATATGAGTCTGATCT 59.655 40.741 14.52 2.51 38.20 2.75
387 617 7.125507 ACCATATGGGAAGATATGAGTCTGATC 59.874 40.741 25.55 0.00 38.20 2.92
388 618 6.964679 ACCATATGGGAAGATATGAGTCTGAT 59.035 38.462 25.55 0.00 38.20 2.90
389 619 6.326161 ACCATATGGGAAGATATGAGTCTGA 58.674 40.000 25.55 0.00 38.20 3.27
390 620 6.617782 ACCATATGGGAAGATATGAGTCTG 57.382 41.667 25.55 0.00 38.20 3.51
391 621 6.789457 TGAACCATATGGGAAGATATGAGTCT 59.211 38.462 25.55 0.00 38.20 3.24
392 622 7.009179 TGAACCATATGGGAAGATATGAGTC 57.991 40.000 25.55 5.95 38.20 3.36
393 623 7.579940 ATGAACCATATGGGAAGATATGAGT 57.420 36.000 25.55 0.00 38.20 3.41
394 624 8.874744 AAATGAACCATATGGGAAGATATGAG 57.125 34.615 25.55 0.00 38.20 2.90
402 632 9.884636 CGTATCTATAAATGAACCATATGGGAA 57.115 33.333 25.55 10.89 41.15 3.97
403 633 7.985184 GCGTATCTATAAATGAACCATATGGGA 59.015 37.037 25.55 9.58 41.15 4.37
404 634 7.768582 TGCGTATCTATAAATGAACCATATGGG 59.231 37.037 25.55 8.07 44.81 4.00
405 635 8.716646 TGCGTATCTATAAATGAACCATATGG 57.283 34.615 20.68 20.68 42.17 2.74
408 638 9.214957 CCTTTGCGTATCTATAAATGAACCATA 57.785 33.333 0.00 0.00 0.00 2.74
409 639 7.174946 CCCTTTGCGTATCTATAAATGAACCAT 59.825 37.037 0.00 0.00 0.00 3.55
410 640 6.485313 CCCTTTGCGTATCTATAAATGAACCA 59.515 38.462 0.00 0.00 0.00 3.67
411 641 6.072673 CCCCTTTGCGTATCTATAAATGAACC 60.073 42.308 0.00 0.00 0.00 3.62
412 642 6.567891 GCCCCTTTGCGTATCTATAAATGAAC 60.568 42.308 0.00 0.00 0.00 3.18
413 643 5.472137 GCCCCTTTGCGTATCTATAAATGAA 59.528 40.000 0.00 0.00 0.00 2.57
414 644 5.001232 GCCCCTTTGCGTATCTATAAATGA 58.999 41.667 0.00 0.00 0.00 2.57
415 645 4.759693 TGCCCCTTTGCGTATCTATAAATG 59.240 41.667 0.00 0.00 0.00 2.32
416 646 4.980573 TGCCCCTTTGCGTATCTATAAAT 58.019 39.130 0.00 0.00 0.00 1.40
417 647 4.101898 TCTGCCCCTTTGCGTATCTATAAA 59.898 41.667 0.00 0.00 0.00 1.40
418 648 3.644265 TCTGCCCCTTTGCGTATCTATAA 59.356 43.478 0.00 0.00 0.00 0.98
419 649 3.236047 TCTGCCCCTTTGCGTATCTATA 58.764 45.455 0.00 0.00 0.00 1.31
420 650 2.047061 TCTGCCCCTTTGCGTATCTAT 58.953 47.619 0.00 0.00 0.00 1.98
421 651 1.491668 TCTGCCCCTTTGCGTATCTA 58.508 50.000 0.00 0.00 0.00 1.98
422 652 0.839946 ATCTGCCCCTTTGCGTATCT 59.160 50.000 0.00 0.00 0.00 1.98
423 653 2.543777 TATCTGCCCCTTTGCGTATC 57.456 50.000 0.00 0.00 0.00 2.24
424 654 2.106511 ACATATCTGCCCCTTTGCGTAT 59.893 45.455 0.00 0.00 0.00 3.06
425 655 1.488812 ACATATCTGCCCCTTTGCGTA 59.511 47.619 0.00 0.00 0.00 4.42
426 656 0.255890 ACATATCTGCCCCTTTGCGT 59.744 50.000 0.00 0.00 0.00 5.24
427 657 1.334869 GAACATATCTGCCCCTTTGCG 59.665 52.381 0.00 0.00 0.00 4.85
428 658 2.378038 TGAACATATCTGCCCCTTTGC 58.622 47.619 0.00 0.00 0.00 3.68
429 659 7.613022 ACATATATGAACATATCTGCCCCTTTG 59.387 37.037 19.63 0.00 33.62 2.77
430 660 7.702785 ACATATATGAACATATCTGCCCCTTT 58.297 34.615 19.63 0.00 33.62 3.11
431 661 7.276088 ACATATATGAACATATCTGCCCCTT 57.724 36.000 19.63 0.00 33.62 3.95
432 662 6.898171 ACATATATGAACATATCTGCCCCT 57.102 37.500 19.63 0.00 33.62 4.79
433 663 7.112122 TGAACATATATGAACATATCTGCCCC 58.888 38.462 19.63 8.68 33.62 5.80
434 664 8.743085 ATGAACATATATGAACATATCTGCCC 57.257 34.615 19.63 10.28 33.62 5.36
469 699 8.918116 GGGCAGATATCTACATGAACATATCTA 58.082 37.037 4.54 0.00 36.74 1.98
470 700 7.401204 TGGGCAGATATCTACATGAACATATCT 59.599 37.037 4.54 9.10 38.55 1.98
471 701 7.559486 TGGGCAGATATCTACATGAACATATC 58.441 38.462 4.54 7.02 0.00 1.63
472 702 7.500629 TGGGCAGATATCTACATGAACATAT 57.499 36.000 4.54 0.00 0.00 1.78
473 703 6.933514 TGGGCAGATATCTACATGAACATA 57.066 37.500 4.54 0.00 0.00 2.29
474 704 5.830799 TGGGCAGATATCTACATGAACAT 57.169 39.130 4.54 0.00 0.00 2.71
475 705 5.830799 ATGGGCAGATATCTACATGAACA 57.169 39.130 4.54 0.00 0.00 3.18
476 706 7.334090 ACATATGGGCAGATATCTACATGAAC 58.666 38.462 19.26 4.37 0.00 3.18
477 707 7.500629 ACATATGGGCAGATATCTACATGAA 57.499 36.000 19.26 7.57 0.00 2.57
478 708 7.333323 CAACATATGGGCAGATATCTACATGA 58.667 38.462 19.26 9.46 0.00 3.07
479 709 6.541278 CCAACATATGGGCAGATATCTACATG 59.459 42.308 19.26 11.07 46.27 3.21
480 710 6.656902 CCAACATATGGGCAGATATCTACAT 58.343 40.000 4.54 12.31 46.27 2.29
481 711 6.053632 CCAACATATGGGCAGATATCTACA 57.946 41.667 4.54 5.71 46.27 2.74
500 730 9.757227 GGCAGATATCTACATATCTAATCCAAC 57.243 37.037 4.54 0.00 46.65 3.77
501 731 9.492730 TGGCAGATATCTACATATCTAATCCAA 57.507 33.333 4.54 0.00 46.65 3.53
502 732 9.666191 ATGGCAGATATCTACATATCTAATCCA 57.334 33.333 16.40 13.25 46.65 3.41
516 746 8.805175 GCAGATATGTAGATATGGCAGATATCT 58.195 37.037 17.21 17.21 42.26 1.98
517 747 8.034215 GGCAGATATGTAGATATGGCAGATATC 58.966 40.741 12.43 0.00 41.75 1.63
518 748 7.038445 GGGCAGATATGTAGATATGGCAGATAT 60.038 40.741 9.35 0.00 43.38 1.63
519 749 6.268617 GGGCAGATATGTAGATATGGCAGATA 59.731 42.308 9.35 0.00 43.38 1.98
520 750 5.071519 GGGCAGATATGTAGATATGGCAGAT 59.928 44.000 9.35 0.00 43.38 2.90
521 751 4.406972 GGGCAGATATGTAGATATGGCAGA 59.593 45.833 9.35 0.00 43.38 4.26
522 752 4.162888 TGGGCAGATATGTAGATATGGCAG 59.837 45.833 9.35 0.00 43.38 4.85
523 753 4.103342 TGGGCAGATATGTAGATATGGCA 58.897 43.478 9.35 0.00 43.38 4.92
524 754 4.760530 TGGGCAGATATGTAGATATGGC 57.239 45.455 0.00 1.44 41.50 4.40
540 770 9.253832 CCCATAACAAATATCTATAAATGGGCA 57.746 33.333 3.76 0.00 43.22 5.36
541 771 9.474313 TCCCATAACAAATATCTATAAATGGGC 57.526 33.333 10.97 0.00 46.99 5.36
692 2085 9.899226 GAAACAAGCACTTCAAAATAGTAGAAT 57.101 29.630 0.00 0.00 0.00 2.40
693 2086 8.349983 GGAAACAAGCACTTCAAAATAGTAGAA 58.650 33.333 0.00 0.00 0.00 2.10
694 2087 7.719633 AGGAAACAAGCACTTCAAAATAGTAGA 59.280 33.333 0.00 0.00 0.00 2.59
695 2088 7.875971 AGGAAACAAGCACTTCAAAATAGTAG 58.124 34.615 0.00 0.00 0.00 2.57
696 2089 7.817418 AGGAAACAAGCACTTCAAAATAGTA 57.183 32.000 0.00 0.00 0.00 1.82
697 2090 6.715347 AGGAAACAAGCACTTCAAAATAGT 57.285 33.333 0.00 0.00 0.00 2.12
698 2091 8.299570 ACATAGGAAACAAGCACTTCAAAATAG 58.700 33.333 0.00 0.00 0.00 1.73
699 2092 8.177119 ACATAGGAAACAAGCACTTCAAAATA 57.823 30.769 0.00 0.00 0.00 1.40
700 2093 7.054491 ACATAGGAAACAAGCACTTCAAAAT 57.946 32.000 0.00 0.00 0.00 1.82
827 2358 6.129179 TCTCAAAGAACTCAAAACCTTCCAT 58.871 36.000 0.00 0.00 0.00 3.41
880 2411 7.921041 AGGGAGATCTTGTCTTGAATATACA 57.079 36.000 0.00 0.00 37.29 2.29
906 2438 7.237263 AGCAGAGAGATGATAAATAGATGGGTT 59.763 37.037 0.00 0.00 0.00 4.11
915 2447 8.034215 GCACTATACAGCAGAGAGATGATAAAT 58.966 37.037 0.00 0.00 37.02 1.40
925 2457 5.354767 CAATCAAGCACTATACAGCAGAGA 58.645 41.667 0.00 0.00 0.00 3.10
990 2522 5.709164 AGCAAGCATCTTCATAAACTTGTCT 59.291 36.000 0.00 0.00 37.44 3.41
1023 2555 1.678728 CGCAGCTTCACTTTATGGGGA 60.679 52.381 0.00 0.00 0.00 4.81
1230 2762 1.154205 GCTGGTAGTACATGCGGCAG 61.154 60.000 9.25 3.35 0.00 4.85
1257 2789 2.036604 GGTAGAGAGCTTACTGGCATCC 59.963 54.545 0.00 0.00 34.17 3.51
1297 2829 0.169009 TCTGTGCGAGACGATGTCAG 59.831 55.000 0.00 0.00 34.60 3.51
1300 2832 1.633561 CAATCTGTGCGAGACGATGT 58.366 50.000 0.00 0.00 31.75 3.06
1302 2834 2.670635 GCAATCTGTGCGAGACGAT 58.329 52.632 0.00 0.00 45.10 3.73
1323 2855 4.943705 TGGCCAAATGCAACAAAGTTTTTA 59.056 33.333 0.61 0.00 43.89 1.52
1374 2915 0.178891 TCTTCCCCACTCTGCTCCTT 60.179 55.000 0.00 0.00 0.00 3.36
1408 2949 0.965439 GCTATGCTCCTCGTCATCCT 59.035 55.000 0.00 0.00 0.00 3.24
1424 2965 1.043673 GCTCCTCTTCTTCCCCGCTA 61.044 60.000 0.00 0.00 0.00 4.26
1456 3144 1.091771 CACCATAGCAAGGTCGCCAG 61.092 60.000 0.00 0.00 37.23 4.85
1457 3145 1.078497 CACCATAGCAAGGTCGCCA 60.078 57.895 0.00 0.00 37.23 5.69
1529 3259 2.502080 GTGAGGTCGTCGTCAGCG 60.502 66.667 5.31 0.00 38.79 5.18
1574 3433 1.285667 TCATCATCAGGCACCACCATT 59.714 47.619 0.00 0.00 43.14 3.16
1653 3566 3.916035 TGCAGATGTACTCCTCTACCAT 58.084 45.455 0.00 0.00 0.00 3.55
1709 3623 8.630917 CACTCGTTCTTATCCTTATTCTCCTTA 58.369 37.037 0.00 0.00 0.00 2.69
1724 3647 6.245115 TCGTAACATCTTCACTCGTTCTTA 57.755 37.500 0.00 0.00 0.00 2.10
1745 3671 2.900122 AACATCGCCACTTGATTTCG 57.100 45.000 0.00 0.00 0.00 3.46
1852 3783 9.414295 CAATTCTCATCAATTTCAAACTAAGCA 57.586 29.630 0.00 0.00 0.00 3.91
1964 3964 5.601583 TCCATGAGCATGCACAAAATATT 57.398 34.783 21.69 1.21 37.49 1.28
2048 4051 9.458374 ACGGAAAACTATGTTTTTAACAATCAG 57.542 29.630 9.36 0.00 45.86 2.90
2140 4143 7.214467 ACGAAAAACCATGTTTAGATGACAT 57.786 32.000 0.00 0.00 38.21 3.06
2284 4290 7.088905 TGAGAAAAAGTAGATACGTTGGAGAC 58.911 38.462 0.00 0.00 0.00 3.36
2285 4291 7.223260 TGAGAAAAAGTAGATACGTTGGAGA 57.777 36.000 0.00 0.00 0.00 3.71
2286 4292 7.464710 GCATGAGAAAAAGTAGATACGTTGGAG 60.465 40.741 0.00 0.00 0.00 3.86
2287 4293 6.312918 GCATGAGAAAAAGTAGATACGTTGGA 59.687 38.462 0.00 0.00 0.00 3.53
2288 4294 6.313905 AGCATGAGAAAAAGTAGATACGTTGG 59.686 38.462 0.00 0.00 0.00 3.77
2289 4295 7.295952 AGCATGAGAAAAAGTAGATACGTTG 57.704 36.000 0.00 0.00 0.00 4.10
2290 4296 7.907214 AAGCATGAGAAAAAGTAGATACGTT 57.093 32.000 0.00 0.00 0.00 3.99
2291 4297 7.907214 AAAGCATGAGAAAAAGTAGATACGT 57.093 32.000 0.00 0.00 0.00 3.57
2292 4298 7.905493 GGAAAAGCATGAGAAAAAGTAGATACG 59.095 37.037 0.00 0.00 0.00 3.06
2293 4299 8.951243 AGGAAAAGCATGAGAAAAAGTAGATAC 58.049 33.333 0.00 0.00 0.00 2.24
2294 4300 9.167311 GAGGAAAAGCATGAGAAAAAGTAGATA 57.833 33.333 0.00 0.00 0.00 1.98
2295 4301 7.887495 AGAGGAAAAGCATGAGAAAAAGTAGAT 59.113 33.333 0.00 0.00 0.00 1.98
2296 4302 7.227156 AGAGGAAAAGCATGAGAAAAAGTAGA 58.773 34.615 0.00 0.00 0.00 2.59
2297 4303 7.446001 AGAGGAAAAGCATGAGAAAAAGTAG 57.554 36.000 0.00 0.00 0.00 2.57
2298 4304 7.285401 ACAAGAGGAAAAGCATGAGAAAAAGTA 59.715 33.333 0.00 0.00 0.00 2.24
2299 4305 6.097412 ACAAGAGGAAAAGCATGAGAAAAAGT 59.903 34.615 0.00 0.00 0.00 2.66
2300 4306 6.510536 ACAAGAGGAAAAGCATGAGAAAAAG 58.489 36.000 0.00 0.00 0.00 2.27
2301 4307 6.469782 ACAAGAGGAAAAGCATGAGAAAAA 57.530 33.333 0.00 0.00 0.00 1.94
2302 4308 6.469782 AACAAGAGGAAAAGCATGAGAAAA 57.530 33.333 0.00 0.00 0.00 2.29
2303 4309 6.469782 AAACAAGAGGAAAAGCATGAGAAA 57.530 33.333 0.00 0.00 0.00 2.52
2304 4310 6.275335 CAAAACAAGAGGAAAAGCATGAGAA 58.725 36.000 0.00 0.00 0.00 2.87
2305 4311 5.221303 CCAAAACAAGAGGAAAAGCATGAGA 60.221 40.000 0.00 0.00 0.00 3.27
2306 4312 4.986659 CCAAAACAAGAGGAAAAGCATGAG 59.013 41.667 0.00 0.00 0.00 2.90
2307 4313 4.648762 TCCAAAACAAGAGGAAAAGCATGA 59.351 37.500 0.00 0.00 0.00 3.07
2308 4314 4.746611 GTCCAAAACAAGAGGAAAAGCATG 59.253 41.667 0.00 0.00 32.30 4.06
2309 4315 4.651045 AGTCCAAAACAAGAGGAAAAGCAT 59.349 37.500 0.00 0.00 32.30 3.79
2310 4316 4.023291 AGTCCAAAACAAGAGGAAAAGCA 58.977 39.130 0.00 0.00 32.30 3.91
2311 4317 4.339530 AGAGTCCAAAACAAGAGGAAAAGC 59.660 41.667 0.00 0.00 32.30 3.51
2312 4318 7.568199 TTAGAGTCCAAAACAAGAGGAAAAG 57.432 36.000 0.00 0.00 32.30 2.27
2313 4319 8.533569 AATTAGAGTCCAAAACAAGAGGAAAA 57.466 30.769 0.00 0.00 32.30 2.29
2314 4320 8.413229 CAAATTAGAGTCCAAAACAAGAGGAAA 58.587 33.333 0.00 0.00 32.30 3.13
2315 4321 7.470009 GCAAATTAGAGTCCAAAACAAGAGGAA 60.470 37.037 0.00 0.00 32.30 3.36
2316 4322 6.016276 GCAAATTAGAGTCCAAAACAAGAGGA 60.016 38.462 0.00 0.00 0.00 3.71
2317 4323 6.152379 GCAAATTAGAGTCCAAAACAAGAGG 58.848 40.000 0.00 0.00 0.00 3.69
2318 4324 6.738114 TGCAAATTAGAGTCCAAAACAAGAG 58.262 36.000 0.00 0.00 0.00 2.85
2319 4325 6.707440 TGCAAATTAGAGTCCAAAACAAGA 57.293 33.333 0.00 0.00 0.00 3.02
2320 4326 9.643693 ATTATGCAAATTAGAGTCCAAAACAAG 57.356 29.630 0.00 0.00 0.00 3.16
2321 4327 9.995003 AATTATGCAAATTAGAGTCCAAAACAA 57.005 25.926 0.00 0.00 0.00 2.83
2322 4328 9.995003 AAATTATGCAAATTAGAGTCCAAAACA 57.005 25.926 0.00 0.00 0.00 2.83
2345 4351 9.816787 TCAGTCCAGGGTTAGTTTAATTAAAAT 57.183 29.630 14.62 14.62 0.00 1.82
2346 4352 9.070179 GTCAGTCCAGGGTTAGTTTAATTAAAA 57.930 33.333 12.14 0.00 0.00 1.52
2347 4353 7.388500 CGTCAGTCCAGGGTTAGTTTAATTAAA 59.612 37.037 6.54 6.54 0.00 1.52
2348 4354 6.875195 CGTCAGTCCAGGGTTAGTTTAATTAA 59.125 38.462 0.00 0.00 0.00 1.40
2349 4355 6.014327 ACGTCAGTCCAGGGTTAGTTTAATTA 60.014 38.462 0.00 0.00 0.00 1.40
2350 4356 5.221783 ACGTCAGTCCAGGGTTAGTTTAATT 60.222 40.000 0.00 0.00 0.00 1.40
2351 4357 4.285260 ACGTCAGTCCAGGGTTAGTTTAAT 59.715 41.667 0.00 0.00 0.00 1.40
2352 4358 3.642848 ACGTCAGTCCAGGGTTAGTTTAA 59.357 43.478 0.00 0.00 0.00 1.52
2353 4359 3.233507 ACGTCAGTCCAGGGTTAGTTTA 58.766 45.455 0.00 0.00 0.00 2.01
2354 4360 2.044758 ACGTCAGTCCAGGGTTAGTTT 58.955 47.619 0.00 0.00 0.00 2.66
2355 4361 1.713297 ACGTCAGTCCAGGGTTAGTT 58.287 50.000 0.00 0.00 0.00 2.24
2356 4362 1.343465 CAACGTCAGTCCAGGGTTAGT 59.657 52.381 0.00 0.00 0.00 2.24
2357 4363 1.343465 ACAACGTCAGTCCAGGGTTAG 59.657 52.381 0.00 0.00 0.00 2.34
2358 4364 1.416243 ACAACGTCAGTCCAGGGTTA 58.584 50.000 0.00 0.00 0.00 2.85
2359 4365 0.544697 AACAACGTCAGTCCAGGGTT 59.455 50.000 0.00 0.00 0.00 4.11
2360 4366 0.544697 AAACAACGTCAGTCCAGGGT 59.455 50.000 0.00 0.00 0.00 4.34
2361 4367 1.602377 GAAAACAACGTCAGTCCAGGG 59.398 52.381 0.00 0.00 0.00 4.45
2362 4368 2.285083 TGAAAACAACGTCAGTCCAGG 58.715 47.619 0.00 0.00 0.00 4.45
2363 4369 2.286418 GCTGAAAACAACGTCAGTCCAG 60.286 50.000 0.00 1.69 42.72 3.86
2364 4370 1.668751 GCTGAAAACAACGTCAGTCCA 59.331 47.619 0.00 0.00 42.72 4.02
2365 4371 1.668751 TGCTGAAAACAACGTCAGTCC 59.331 47.619 0.00 0.00 42.72 3.85
2366 4372 2.607635 TCTGCTGAAAACAACGTCAGTC 59.392 45.455 0.00 0.00 42.72 3.51
2367 4373 2.627945 TCTGCTGAAAACAACGTCAGT 58.372 42.857 0.00 0.00 42.72 3.41
2368 4374 3.063997 AGTTCTGCTGAAAACAACGTCAG 59.936 43.478 7.68 0.00 43.46 3.51
2369 4375 3.006940 AGTTCTGCTGAAAACAACGTCA 58.993 40.909 7.68 0.00 33.52 4.35
2370 4376 3.675467 AGTTCTGCTGAAAACAACGTC 57.325 42.857 7.68 0.00 33.52 4.34
2371 4377 3.311596 GGTAGTTCTGCTGAAAACAACGT 59.688 43.478 7.68 0.00 33.52 3.99
2372 4378 3.311322 TGGTAGTTCTGCTGAAAACAACG 59.689 43.478 7.68 0.00 33.52 4.10
2373 4379 4.893424 TGGTAGTTCTGCTGAAAACAAC 57.107 40.909 7.68 4.29 33.52 3.32
2374 4380 4.278170 CCATGGTAGTTCTGCTGAAAACAA 59.722 41.667 7.68 3.91 33.52 2.83
2375 4381 3.820467 CCATGGTAGTTCTGCTGAAAACA 59.180 43.478 7.68 2.98 33.52 2.83
2376 4382 3.821033 ACCATGGTAGTTCTGCTGAAAAC 59.179 43.478 18.10 9.13 33.52 2.43
2377 4383 3.820467 CACCATGGTAGTTCTGCTGAAAA 59.180 43.478 19.28 0.00 33.52 2.29
2378 4384 3.181445 ACACCATGGTAGTTCTGCTGAAA 60.181 43.478 19.28 0.00 33.52 2.69
2379 4385 2.371841 ACACCATGGTAGTTCTGCTGAA 59.628 45.455 19.28 1.33 0.00 3.02
2380 4386 1.977854 ACACCATGGTAGTTCTGCTGA 59.022 47.619 19.28 0.00 0.00 4.26
2381 4387 2.479566 ACACCATGGTAGTTCTGCTG 57.520 50.000 19.28 4.20 0.00 4.41
2382 4388 2.553028 CCAACACCATGGTAGTTCTGCT 60.553 50.000 19.28 0.19 35.65 4.24
2383 4389 1.812571 CCAACACCATGGTAGTTCTGC 59.187 52.381 19.28 0.00 35.65 4.26
2392 4398 1.134580 TGCACAAAACCAACACCATGG 60.135 47.619 11.19 11.19 46.38 3.66
2393 4399 2.159128 TCTGCACAAAACCAACACCATG 60.159 45.455 0.00 0.00 0.00 3.66
2394 4400 2.106566 TCTGCACAAAACCAACACCAT 58.893 42.857 0.00 0.00 0.00 3.55
2395 4401 1.550327 TCTGCACAAAACCAACACCA 58.450 45.000 0.00 0.00 0.00 4.17
2396 4402 2.663826 TTCTGCACAAAACCAACACC 57.336 45.000 0.00 0.00 0.00 4.16
2397 4403 6.654793 TTTATTTCTGCACAAAACCAACAC 57.345 33.333 0.00 0.00 0.00 3.32
2398 4404 6.876257 AGTTTTATTTCTGCACAAAACCAACA 59.124 30.769 5.43 0.00 40.21 3.33
2399 4405 7.302350 AGTTTTATTTCTGCACAAAACCAAC 57.698 32.000 5.43 0.00 40.21 3.77
2400 4406 7.821846 AGAAGTTTTATTTCTGCACAAAACCAA 59.178 29.630 5.43 0.00 40.21 3.67
2401 4407 7.327214 AGAAGTTTTATTTCTGCACAAAACCA 58.673 30.769 5.43 0.00 40.21 3.67
2402 4408 7.770801 AGAAGTTTTATTTCTGCACAAAACC 57.229 32.000 5.43 0.00 40.21 3.27
2403 4409 8.116136 CCAAGAAGTTTTATTTCTGCACAAAAC 58.884 33.333 0.00 0.00 39.85 2.43
2404 4410 8.037758 TCCAAGAAGTTTTATTTCTGCACAAAA 58.962 29.630 0.00 0.00 35.20 2.44
2405 4411 7.551585 TCCAAGAAGTTTTATTTCTGCACAAA 58.448 30.769 0.00 0.00 35.20 2.83
2406 4412 7.106439 TCCAAGAAGTTTTATTTCTGCACAA 57.894 32.000 0.00 0.00 35.20 3.33
2407 4413 6.707440 TCCAAGAAGTTTTATTTCTGCACA 57.293 33.333 0.00 0.00 35.20 4.57
2408 4414 7.116805 CCATTCCAAGAAGTTTTATTTCTGCAC 59.883 37.037 0.00 0.00 35.20 4.57
2409 4415 7.015098 TCCATTCCAAGAAGTTTTATTTCTGCA 59.985 33.333 0.00 0.00 35.20 4.41
2410 4416 7.378181 TCCATTCCAAGAAGTTTTATTTCTGC 58.622 34.615 0.00 0.00 35.20 4.26
2411 4417 9.196552 GTTCCATTCCAAGAAGTTTTATTTCTG 57.803 33.333 0.00 0.00 35.20 3.02
2412 4418 8.082242 CGTTCCATTCCAAGAAGTTTTATTTCT 58.918 33.333 0.00 0.00 36.49 2.52
2413 4419 8.079809 TCGTTCCATTCCAAGAAGTTTTATTTC 58.920 33.333 0.00 0.00 0.00 2.17
2414 4420 7.947282 TCGTTCCATTCCAAGAAGTTTTATTT 58.053 30.769 0.00 0.00 0.00 1.40
2415 4421 7.519032 TCGTTCCATTCCAAGAAGTTTTATT 57.481 32.000 0.00 0.00 0.00 1.40
2416 4422 7.519032 TTCGTTCCATTCCAAGAAGTTTTAT 57.481 32.000 0.00 0.00 0.00 1.40
2417 4423 6.945938 TTCGTTCCATTCCAAGAAGTTTTA 57.054 33.333 0.00 0.00 0.00 1.52
2418 4424 5.845391 TTCGTTCCATTCCAAGAAGTTTT 57.155 34.783 0.00 0.00 0.00 2.43
2419 4425 5.359860 AGTTTCGTTCCATTCCAAGAAGTTT 59.640 36.000 0.00 0.00 0.00 2.66
2420 4426 4.887655 AGTTTCGTTCCATTCCAAGAAGTT 59.112 37.500 0.00 0.00 0.00 2.66
2421 4427 4.461198 AGTTTCGTTCCATTCCAAGAAGT 58.539 39.130 0.00 0.00 0.00 3.01
2422 4428 5.438761 AAGTTTCGTTCCATTCCAAGAAG 57.561 39.130 0.00 0.00 0.00 2.85
2423 4429 5.845391 AAAGTTTCGTTCCATTCCAAGAA 57.155 34.783 0.00 0.00 0.00 2.52
2424 4430 5.845391 AAAAGTTTCGTTCCATTCCAAGA 57.155 34.783 0.00 0.00 0.00 3.02
2425 4431 6.039616 TCAAAAAGTTTCGTTCCATTCCAAG 58.960 36.000 0.00 0.00 0.00 3.61
2426 4432 5.967088 TCAAAAAGTTTCGTTCCATTCCAA 58.033 33.333 0.00 0.00 0.00 3.53
2427 4433 5.584253 TCAAAAAGTTTCGTTCCATTCCA 57.416 34.783 0.00 0.00 0.00 3.53
2428 4434 6.270064 TCTTCAAAAAGTTTCGTTCCATTCC 58.730 36.000 0.00 0.00 33.95 3.01
2429 4435 7.749539 TTCTTCAAAAAGTTTCGTTCCATTC 57.250 32.000 0.00 0.00 33.95 2.67
2430 4436 8.716646 AATTCTTCAAAAAGTTTCGTTCCATT 57.283 26.923 0.00 0.00 33.95 3.16
2431 4437 8.716646 AAATTCTTCAAAAAGTTTCGTTCCAT 57.283 26.923 0.00 0.00 33.95 3.41
2432 4438 8.541133 AAAATTCTTCAAAAAGTTTCGTTCCA 57.459 26.923 0.00 0.00 33.95 3.53
2469 4475 9.134055 GGTAGGTCTTAGCTCTAGAAATTCTTA 57.866 37.037 0.00 0.00 0.00 2.10
2470 4476 7.201839 CGGTAGGTCTTAGCTCTAGAAATTCTT 60.202 40.741 0.00 0.00 0.00 2.52
2471 4477 6.263617 CGGTAGGTCTTAGCTCTAGAAATTCT 59.736 42.308 0.00 0.00 0.00 2.40
2472 4478 6.440436 CGGTAGGTCTTAGCTCTAGAAATTC 58.560 44.000 0.00 0.00 0.00 2.17
2473 4479 5.302313 CCGGTAGGTCTTAGCTCTAGAAATT 59.698 44.000 0.00 0.00 0.00 1.82
2474 4480 4.828387 CCGGTAGGTCTTAGCTCTAGAAAT 59.172 45.833 0.00 0.00 0.00 2.17
2475 4481 4.080129 TCCGGTAGGTCTTAGCTCTAGAAA 60.080 45.833 0.00 0.00 39.05 2.52
2476 4482 3.457380 TCCGGTAGGTCTTAGCTCTAGAA 59.543 47.826 0.00 0.00 39.05 2.10
2477 4483 3.044156 TCCGGTAGGTCTTAGCTCTAGA 58.956 50.000 0.00 0.00 39.05 2.43
2478 4484 3.071312 TCTCCGGTAGGTCTTAGCTCTAG 59.929 52.174 0.00 0.00 39.05 2.43
2479 4485 3.044156 TCTCCGGTAGGTCTTAGCTCTA 58.956 50.000 0.00 0.00 39.05 2.43
2480 4486 1.845143 TCTCCGGTAGGTCTTAGCTCT 59.155 52.381 0.00 0.00 39.05 4.09
2481 4487 2.223745 CTCTCCGGTAGGTCTTAGCTC 58.776 57.143 0.00 0.00 39.05 4.09
2482 4488 1.133730 CCTCTCCGGTAGGTCTTAGCT 60.134 57.143 15.12 0.00 39.05 3.32
2483 4489 1.320507 CCTCTCCGGTAGGTCTTAGC 58.679 60.000 15.12 0.00 39.05 3.09
2484 4490 1.479021 CCCCTCTCCGGTAGGTCTTAG 60.479 61.905 19.84 7.88 39.05 2.18
2485 4491 0.554792 CCCCTCTCCGGTAGGTCTTA 59.445 60.000 19.84 0.00 39.05 2.10
2486 4492 1.310373 CCCCTCTCCGGTAGGTCTT 59.690 63.158 19.84 0.00 39.05 3.01
2487 4493 3.017139 CCCCTCTCCGGTAGGTCT 58.983 66.667 19.84 0.00 39.05 3.85
2488 4494 2.838693 GCCCCTCTCCGGTAGGTC 60.839 72.222 19.84 10.51 39.05 3.85
2489 4495 4.477119 GGCCCCTCTCCGGTAGGT 62.477 72.222 19.84 0.00 39.05 3.08
2515 4521 3.694538 GCCATGGTGGGTTGTGCC 61.695 66.667 14.67 0.00 38.19 5.01
2516 4522 2.916703 TGCCATGGTGGGTTGTGC 60.917 61.111 14.67 0.00 38.19 4.57
2517 4523 2.918345 CGTGCCATGGTGGGTTGTG 61.918 63.158 14.67 0.00 38.19 3.33
2518 4524 2.597217 CGTGCCATGGTGGGTTGT 60.597 61.111 14.67 0.00 38.19 3.32
2519 4525 4.054825 GCGTGCCATGGTGGGTTG 62.055 66.667 14.67 0.00 38.19 3.77
2581 4587 4.410400 GGGTTGAGGTCTGCGGGG 62.410 72.222 0.00 0.00 0.00 5.73
2582 4588 1.550130 TTAGGGTTGAGGTCTGCGGG 61.550 60.000 0.00 0.00 0.00 6.13
2583 4589 0.391263 GTTAGGGTTGAGGTCTGCGG 60.391 60.000 0.00 0.00 0.00 5.69
2584 4590 0.320374 TGTTAGGGTTGAGGTCTGCG 59.680 55.000 0.00 0.00 0.00 5.18
2585 4591 1.348036 AGTGTTAGGGTTGAGGTCTGC 59.652 52.381 0.00 0.00 0.00 4.26
2586 4592 6.540438 TTATAGTGTTAGGGTTGAGGTCTG 57.460 41.667 0.00 0.00 0.00 3.51
2587 4593 7.750947 ATTTATAGTGTTAGGGTTGAGGTCT 57.249 36.000 0.00 0.00 0.00 3.85
2588 4594 7.498239 GGAATTTATAGTGTTAGGGTTGAGGTC 59.502 40.741 0.00 0.00 0.00 3.85
2589 4595 7.184022 AGGAATTTATAGTGTTAGGGTTGAGGT 59.816 37.037 0.00 0.00 0.00 3.85
2590 4596 7.574607 AGGAATTTATAGTGTTAGGGTTGAGG 58.425 38.462 0.00 0.00 0.00 3.86
2627 4633 8.462016 CACGATAATTCTTTCTCCCTGATTTTT 58.538 33.333 0.00 0.00 0.00 1.94
2628 4634 7.829211 TCACGATAATTCTTTCTCCCTGATTTT 59.171 33.333 0.00 0.00 0.00 1.82
2629 4635 7.338710 TCACGATAATTCTTTCTCCCTGATTT 58.661 34.615 0.00 0.00 0.00 2.17
2630 4636 6.889198 TCACGATAATTCTTTCTCCCTGATT 58.111 36.000 0.00 0.00 0.00 2.57
2631 4637 6.485830 TCACGATAATTCTTTCTCCCTGAT 57.514 37.500 0.00 0.00 0.00 2.90
2632 4638 5.932619 TCACGATAATTCTTTCTCCCTGA 57.067 39.130 0.00 0.00 0.00 3.86
2633 4639 5.698545 GGATCACGATAATTCTTTCTCCCTG 59.301 44.000 0.00 0.00 0.00 4.45
2634 4640 5.366768 TGGATCACGATAATTCTTTCTCCCT 59.633 40.000 0.00 0.00 0.00 4.20
2635 4641 5.611374 TGGATCACGATAATTCTTTCTCCC 58.389 41.667 0.00 0.00 0.00 4.30
2636 4642 6.931281 TCATGGATCACGATAATTCTTTCTCC 59.069 38.462 0.00 0.00 0.00 3.71
2637 4643 7.869937 TCTCATGGATCACGATAATTCTTTCTC 59.130 37.037 0.00 0.00 0.00 2.87
2638 4644 7.730084 TCTCATGGATCACGATAATTCTTTCT 58.270 34.615 0.00 0.00 0.00 2.52
2639 4645 7.953158 TCTCATGGATCACGATAATTCTTTC 57.047 36.000 0.00 0.00 0.00 2.62
2640 4646 9.650539 CTATCTCATGGATCACGATAATTCTTT 57.349 33.333 0.00 0.00 35.98 2.52
2641 4647 9.029368 TCTATCTCATGGATCACGATAATTCTT 57.971 33.333 0.00 0.00 35.98 2.52
2642 4648 8.586879 TCTATCTCATGGATCACGATAATTCT 57.413 34.615 0.00 0.00 35.98 2.40
2643 4649 7.434897 GCTCTATCTCATGGATCACGATAATTC 59.565 40.741 0.00 0.00 35.98 2.17
2644 4650 7.264221 GCTCTATCTCATGGATCACGATAATT 58.736 38.462 0.00 0.00 35.98 1.40
2645 4651 6.183360 GGCTCTATCTCATGGATCACGATAAT 60.183 42.308 0.00 0.00 35.98 1.28
2646 4652 5.126222 GGCTCTATCTCATGGATCACGATAA 59.874 44.000 0.00 0.00 35.98 1.75
2647 4653 4.642437 GGCTCTATCTCATGGATCACGATA 59.358 45.833 0.00 0.00 35.98 2.92
2648 4654 3.446873 GGCTCTATCTCATGGATCACGAT 59.553 47.826 0.00 0.00 35.98 3.73
2649 4655 2.822561 GGCTCTATCTCATGGATCACGA 59.177 50.000 0.00 0.00 35.98 4.35
2650 4656 2.415224 CGGCTCTATCTCATGGATCACG 60.415 54.545 0.00 0.00 35.98 4.35
2651 4657 2.673610 GCGGCTCTATCTCATGGATCAC 60.674 54.545 0.00 0.00 35.98 3.06
2652 4658 1.547820 GCGGCTCTATCTCATGGATCA 59.452 52.381 0.00 0.00 35.98 2.92
2653 4659 1.134848 GGCGGCTCTATCTCATGGATC 60.135 57.143 0.00 0.00 35.98 3.36
2654 4660 0.901124 GGCGGCTCTATCTCATGGAT 59.099 55.000 0.00 0.00 38.38 3.41
2655 4661 1.527433 CGGCGGCTCTATCTCATGGA 61.527 60.000 7.61 0.00 0.00 3.41
2656 4662 1.080230 CGGCGGCTCTATCTCATGG 60.080 63.158 7.61 0.00 0.00 3.66
2657 4663 1.735920 GCGGCGGCTCTATCTCATG 60.736 63.158 9.78 0.00 35.83 3.07
2658 4664 2.653702 GCGGCGGCTCTATCTCAT 59.346 61.111 9.78 0.00 35.83 2.90
2659 4665 3.606662 GGCGGCGGCTCTATCTCA 61.607 66.667 27.22 0.00 39.81 3.27
2660 4666 3.151958 TTGGCGGCGGCTCTATCTC 62.152 63.158 33.21 0.38 39.81 2.75
2661 4667 3.154473 TTGGCGGCGGCTCTATCT 61.154 61.111 33.21 0.00 39.81 1.98
2662 4668 2.663188 CTTGGCGGCGGCTCTATC 60.663 66.667 33.21 2.02 39.81 2.08
2663 4669 4.918201 GCTTGGCGGCGGCTCTAT 62.918 66.667 33.21 0.00 39.81 1.98
2672 4678 2.282462 AAGAACAGGGCTTGGCGG 60.282 61.111 0.44 0.00 0.00 6.13
2673 4679 2.335712 GGAAGAACAGGGCTTGGCG 61.336 63.158 0.44 0.00 0.00 5.69
2674 4680 0.540597 AAGGAAGAACAGGGCTTGGC 60.541 55.000 0.44 0.00 0.00 4.52
2675 4681 1.251251 CAAGGAAGAACAGGGCTTGG 58.749 55.000 0.44 0.00 0.00 3.61
2676 4682 1.251251 CCAAGGAAGAACAGGGCTTG 58.749 55.000 0.00 0.00 0.00 4.01
2677 4683 0.540597 GCCAAGGAAGAACAGGGCTT 60.541 55.000 0.00 0.00 38.37 4.35
2678 4684 1.075659 GCCAAGGAAGAACAGGGCT 59.924 57.895 0.00 0.00 38.37 5.19
2679 4685 0.827507 TTGCCAAGGAAGAACAGGGC 60.828 55.000 0.00 0.00 41.70 5.19
2680 4686 1.251251 CTTGCCAAGGAAGAACAGGG 58.749 55.000 0.00 0.00 0.00 4.45
2691 4697 2.170187 ACTCTAGATCTGCCTTGCCAAG 59.830 50.000 5.18 0.00 0.00 3.61
2692 4698 2.169352 GACTCTAGATCTGCCTTGCCAA 59.831 50.000 5.18 0.00 0.00 4.52
2693 4699 1.759445 GACTCTAGATCTGCCTTGCCA 59.241 52.381 5.18 0.00 0.00 4.92
2694 4700 1.069978 GGACTCTAGATCTGCCTTGCC 59.930 57.143 5.18 0.00 0.00 4.52
2695 4701 1.269517 CGGACTCTAGATCTGCCTTGC 60.270 57.143 5.18 0.00 0.00 4.01
2696 4702 2.028130 ACGGACTCTAGATCTGCCTTG 58.972 52.381 5.18 0.00 0.00 3.61
2697 4703 2.445682 ACGGACTCTAGATCTGCCTT 57.554 50.000 5.18 0.00 0.00 4.35
2698 4704 2.428890 CAAACGGACTCTAGATCTGCCT 59.571 50.000 5.18 0.00 0.00 4.75
2699 4705 2.482142 CCAAACGGACTCTAGATCTGCC 60.482 54.545 5.18 0.00 0.00 4.85
2700 4706 2.427453 TCCAAACGGACTCTAGATCTGC 59.573 50.000 5.18 0.00 0.00 4.26
2701 4707 3.490078 GCTCCAAACGGACTCTAGATCTG 60.490 52.174 5.18 1.41 0.00 2.90
2702 4708 2.691011 GCTCCAAACGGACTCTAGATCT 59.309 50.000 0.00 0.00 0.00 2.75
2703 4709 2.691011 AGCTCCAAACGGACTCTAGATC 59.309 50.000 0.00 0.00 0.00 2.75
2704 4710 2.691011 GAGCTCCAAACGGACTCTAGAT 59.309 50.000 0.87 0.00 32.43 1.98
2705 4711 2.093106 GAGCTCCAAACGGACTCTAGA 58.907 52.381 0.87 0.00 32.43 2.43
2706 4712 1.135333 GGAGCTCCAAACGGACTCTAG 59.865 57.143 28.43 0.00 34.11 2.43
2707 4713 1.183549 GGAGCTCCAAACGGACTCTA 58.816 55.000 28.43 0.00 34.11 2.43
2708 4714 1.878656 CGGAGCTCCAAACGGACTCT 61.879 60.000 31.67 0.00 34.11 3.24
2709 4715 1.446272 CGGAGCTCCAAACGGACTC 60.446 63.158 31.67 1.29 35.14 3.36
2710 4716 2.657237 CGGAGCTCCAAACGGACT 59.343 61.111 31.67 0.00 35.14 3.85
2714 4720 1.153745 CTCTCCGGAGCTCCAAACG 60.154 63.158 31.67 17.41 35.14 3.60
2715 4721 1.219393 CCTCTCCGGAGCTCCAAAC 59.781 63.158 31.67 5.56 38.21 2.93
2716 4722 1.990060 CCCTCTCCGGAGCTCCAAA 60.990 63.158 31.67 17.75 38.21 3.28
2717 4723 2.364317 CCCTCTCCGGAGCTCCAA 60.364 66.667 31.67 18.12 38.21 3.53
2718 4724 4.465446 CCCCTCTCCGGAGCTCCA 62.465 72.222 31.67 13.13 38.21 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.