Multiple sequence alignment - TraesCS5A01G334700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G334700 chr5A 100.000 3844 0 0 1 3844 544162684 544166527 0.000000e+00 7099
1 TraesCS5A01G334700 chr5A 85.181 1930 241 24 994 2907 544463367 544465267 0.000000e+00 1938
2 TraesCS5A01G334700 chr5A 87.629 1649 187 9 981 2624 544246758 544248394 0.000000e+00 1899
3 TraesCS5A01G334700 chr5A 85.158 1644 211 22 981 2614 544454716 544456336 0.000000e+00 1653
4 TraesCS5A01G334700 chr5A 98.113 106 2 0 3593 3698 480124896 480125001 6.560000e-43 185
5 TraesCS5A01G334700 chr5D 94.763 2024 81 7 981 3003 428514014 428516013 0.000000e+00 3127
6 TraesCS5A01G334700 chr5D 88.590 2191 185 22 989 3163 428567328 428569469 0.000000e+00 2601
7 TraesCS5A01G334700 chr5D 86.757 1767 200 15 981 2741 428594790 428596528 0.000000e+00 1936
8 TraesCS5A01G334700 chr5D 85.127 1654 217 19 981 2626 428672453 428674085 0.000000e+00 1664
9 TraesCS5A01G334700 chr5D 91.327 196 17 0 2992 3187 428517562 428517757 6.330000e-68 268
10 TraesCS5A01G334700 chr5D 94.318 88 5 0 3258 3345 50679441 50679528 6.700000e-28 135
11 TraesCS5A01G334700 chr5B 89.049 1799 183 8 995 2791 517696192 517697978 0.000000e+00 2218
12 TraesCS5A01G334700 chr5B 90.963 1516 112 9 1753 3260 517706538 517708036 0.000000e+00 2017
13 TraesCS5A01G334700 chr5B 86.608 1807 208 15 981 2781 517776718 517778496 0.000000e+00 1965
14 TraesCS5A01G334700 chr5B 99.593 984 4 0 1 984 48315291 48316274 0.000000e+00 1796
15 TraesCS5A01G334700 chr5B 90.244 328 28 3 2869 3195 517698009 517698333 3.550000e-115 425
16 TraesCS5A01G334700 chr5B 93.548 124 4 4 3583 3704 249707899 249707778 8.480000e-42 182
17 TraesCS5A01G334700 chr5B 95.536 112 4 1 3593 3704 546862878 546862768 1.100000e-40 178
18 TraesCS5A01G334700 chr2A 99.593 984 4 0 1 984 602798693 602799676 0.000000e+00 1796
19 TraesCS5A01G334700 chr1A 99.795 977 2 0 4 980 369458326 369457350 0.000000e+00 1794
20 TraesCS5A01G334700 chr1A 99.491 982 5 0 1 982 517046142 517045161 0.000000e+00 1786
21 TraesCS5A01G334700 chr1A 99.390 984 6 0 1 984 10077857 10076874 0.000000e+00 1784
22 TraesCS5A01G334700 chr1A 98.113 106 2 0 3592 3697 385269218 385269113 6.560000e-43 185
23 TraesCS5A01G334700 chr7A 99.492 985 5 0 1 985 10638059 10637075 0.000000e+00 1792
24 TraesCS5A01G334700 chr7A 95.324 278 13 0 3314 3591 59611872 59611595 3.520000e-120 442
25 TraesCS5A01G334700 chr7A 95.918 147 6 0 3698 3844 59611601 59611455 4.960000e-59 239
26 TraesCS5A01G334700 chr7A 86.034 179 21 4 3259 3435 555638759 555638935 5.070000e-44 189
27 TraesCS5A01G334700 chr7A 83.092 207 33 2 3259 3464 117674887 117675092 1.820000e-43 187
28 TraesCS5A01G334700 chr7A 95.536 112 4 1 3586 3697 144655216 144655106 1.100000e-40 178
29 TraesCS5A01G334700 chr1B 99.492 984 5 0 1 984 655770487 655769504 0.000000e+00 1790
30 TraesCS5A01G334700 chr1B 97.273 110 3 0 3588 3697 583853535 583853426 1.820000e-43 187
31 TraesCS5A01G334700 chr1B 94.048 84 5 0 3259 3342 2802657 2802574 1.120000e-25 128
32 TraesCS5A01G334700 chr4A 99.491 983 5 0 1 983 575698855 575699837 0.000000e+00 1788
33 TraesCS5A01G334700 chr6B 98.901 1001 8 3 1 999 410234262 410235261 0.000000e+00 1784
34 TraesCS5A01G334700 chr6B 91.329 173 15 0 3264 3436 713144199 713144027 1.790000e-58 237
35 TraesCS5A01G334700 chr6B 80.110 181 33 3 3258 3436 438296347 438296526 8.670000e-27 132
36 TraesCS5A01G334700 chr7B 86.686 338 33 8 3259 3593 255562582 255562254 7.850000e-97 364
37 TraesCS5A01G334700 chr7B 92.308 130 6 4 3586 3714 736300260 736300134 8.480000e-42 182
38 TraesCS5A01G334700 chr7B 84.138 145 23 0 3698 3842 255562262 255562118 1.440000e-29 141
39 TraesCS5A01G334700 chr4D 93.056 144 10 0 3700 3843 11495689 11495546 1.080000e-50 211
40 TraesCS5A01G334700 chr4D 82.105 190 27 6 3259 3444 6954396 6954210 5.140000e-34 156
41 TraesCS5A01G334700 chr1D 91.724 145 12 0 3699 3843 250205987 250206131 6.510000e-48 202
42 TraesCS5A01G334700 chr3A 94.355 124 4 3 3582 3703 623224788 623224666 1.820000e-43 187
43 TraesCS5A01G334700 chr2B 97.222 108 3 0 3591 3698 259029340 259029447 2.360000e-42 183
44 TraesCS5A01G334700 chr6A 82.464 211 31 6 3258 3465 578721619 578721412 3.050000e-41 180
45 TraesCS5A01G334700 chr6D 89.844 128 12 1 3717 3844 450610653 450610527 3.070000e-36 163
46 TraesCS5A01G334700 chrUn 91.463 82 7 0 3264 3345 81270369 81270288 3.140000e-21 113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G334700 chr5A 544162684 544166527 3843 False 7099.0 7099 100.0000 1 3844 1 chr5A.!!$F2 3843
1 TraesCS5A01G334700 chr5A 544463367 544465267 1900 False 1938.0 1938 85.1810 994 2907 1 chr5A.!!$F5 1913
2 TraesCS5A01G334700 chr5A 544246758 544248394 1636 False 1899.0 1899 87.6290 981 2624 1 chr5A.!!$F3 1643
3 TraesCS5A01G334700 chr5A 544454716 544456336 1620 False 1653.0 1653 85.1580 981 2614 1 chr5A.!!$F4 1633
4 TraesCS5A01G334700 chr5D 428567328 428569469 2141 False 2601.0 2601 88.5900 989 3163 1 chr5D.!!$F2 2174
5 TraesCS5A01G334700 chr5D 428594790 428596528 1738 False 1936.0 1936 86.7570 981 2741 1 chr5D.!!$F3 1760
6 TraesCS5A01G334700 chr5D 428514014 428517757 3743 False 1697.5 3127 93.0450 981 3187 2 chr5D.!!$F5 2206
7 TraesCS5A01G334700 chr5D 428672453 428674085 1632 False 1664.0 1664 85.1270 981 2626 1 chr5D.!!$F4 1645
8 TraesCS5A01G334700 chr5B 517706538 517708036 1498 False 2017.0 2017 90.9630 1753 3260 1 chr5B.!!$F2 1507
9 TraesCS5A01G334700 chr5B 517776718 517778496 1778 False 1965.0 1965 86.6080 981 2781 1 chr5B.!!$F3 1800
10 TraesCS5A01G334700 chr5B 48315291 48316274 983 False 1796.0 1796 99.5930 1 984 1 chr5B.!!$F1 983
11 TraesCS5A01G334700 chr5B 517696192 517698333 2141 False 1321.5 2218 89.6465 995 3195 2 chr5B.!!$F4 2200
12 TraesCS5A01G334700 chr2A 602798693 602799676 983 False 1796.0 1796 99.5930 1 984 1 chr2A.!!$F1 983
13 TraesCS5A01G334700 chr1A 369457350 369458326 976 True 1794.0 1794 99.7950 4 980 1 chr1A.!!$R2 976
14 TraesCS5A01G334700 chr1A 517045161 517046142 981 True 1786.0 1786 99.4910 1 982 1 chr1A.!!$R4 981
15 TraesCS5A01G334700 chr1A 10076874 10077857 983 True 1784.0 1784 99.3900 1 984 1 chr1A.!!$R1 983
16 TraesCS5A01G334700 chr7A 10637075 10638059 984 True 1792.0 1792 99.4920 1 985 1 chr7A.!!$R1 984
17 TraesCS5A01G334700 chr1B 655769504 655770487 983 True 1790.0 1790 99.4920 1 984 1 chr1B.!!$R3 983
18 TraesCS5A01G334700 chr4A 575698855 575699837 982 False 1788.0 1788 99.4910 1 983 1 chr4A.!!$F1 982
19 TraesCS5A01G334700 chr6B 410234262 410235261 999 False 1784.0 1784 98.9010 1 999 1 chr6B.!!$F1 998

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
461 462 2.945668 GACAAGAGAGTGCCACAAAAGT 59.054 45.455 0.0 0.0 0.00 2.66 F
1006 1007 2.305343 AGCAGCCTCTATTGGATGGATC 59.695 50.000 1.0 0.0 43.14 3.36 F
2426 2433 1.026718 GGGCAAACATCCAGGAGACG 61.027 60.000 0.0 0.0 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2315 2322 1.542915 ACATTCTGCATCCAACACAGC 59.457 47.619 0.0 0.0 0.0 4.40 R
2512 2519 1.403514 CGTCTCAAGTCTTCTGCCTCC 60.404 57.143 0.0 0.0 0.0 4.30 R
3385 4988 0.036671 TCTACAGTGACTCGCCTCGA 60.037 55.000 0.0 0.0 0.0 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
461 462 2.945668 GACAAGAGAGTGCCACAAAAGT 59.054 45.455 0.00 0.00 0.00 2.66
968 969 4.794334 TGGGACTAAAGGCTTTGTTGTTA 58.206 39.130 22.32 0.05 0.00 2.41
985 986 7.946655 TGTTGTTATTGTTGTTGTTGTTGAA 57.053 28.000 0.00 0.00 0.00 2.69
1006 1007 2.305343 AGCAGCCTCTATTGGATGGATC 59.695 50.000 1.00 0.00 43.14 3.36
1729 1730 2.975410 TTTTGATGAGAAGCACTGCG 57.025 45.000 0.00 0.00 0.00 5.18
1789 1790 6.378280 AGAACTTCAAGATGAACAAGTGGTTT 59.622 34.615 0.00 0.00 40.63 3.27
1880 1881 4.436242 TGTTAACAAAAGTTCGCCAACA 57.564 36.364 5.64 0.00 34.60 3.33
2181 2182 5.242838 TGCAAGAATGTTAAAACCCGATTCT 59.757 36.000 0.00 0.00 33.31 2.40
2315 2322 4.667519 ACGCCTAACTAACCCTATTCTG 57.332 45.455 0.00 0.00 0.00 3.02
2426 2433 1.026718 GGGCAAACATCCAGGAGACG 61.027 60.000 0.00 0.00 0.00 4.18
2450 2457 6.896088 CGTGCAAAATTTTCTTTCTTCACTTG 59.104 34.615 0.00 0.00 0.00 3.16
2451 2458 7.182089 GTGCAAAATTTTCTTTCTTCACTTGG 58.818 34.615 0.00 0.00 0.00 3.61
2452 2459 6.878389 TGCAAAATTTTCTTTCTTCACTTGGT 59.122 30.769 0.00 0.00 0.00 3.67
2498 2505 7.164803 AGAAATTTTGGACAAACAACTTCCAA 58.835 30.769 0.00 0.00 45.69 3.53
2512 2519 1.537202 CTTCCAAAACCCGAAGCTGAG 59.463 52.381 0.00 0.00 29.89 3.35
2539 2549 4.142447 GCAGAAGACTTGAGACGGTGTATA 60.142 45.833 0.00 0.00 0.00 1.47
2541 2551 6.565234 CAGAAGACTTGAGACGGTGTATATT 58.435 40.000 0.00 0.00 0.00 1.28
2614 2624 6.873605 TGCTGAAAGTTTATCGAGATCTTTCA 59.126 34.615 24.98 24.98 46.03 2.69
2631 2645 9.877178 AGATCTTTCAATCTGAAGTTATTACGT 57.123 29.630 0.00 0.00 37.70 3.57
2636 2650 9.878667 TTTCAATCTGAAGTTATTACGTATGGA 57.121 29.630 0.00 0.00 37.70 3.41
2637 2651 9.529325 TTCAATCTGAAGTTATTACGTATGGAG 57.471 33.333 0.00 0.00 31.83 3.86
2638 2652 8.692710 TCAATCTGAAGTTATTACGTATGGAGT 58.307 33.333 0.00 0.00 0.00 3.85
2838 2867 7.445121 TCATACAGATCATGGATCAACCTTAC 58.555 38.462 8.75 0.00 41.12 2.34
2842 2871 5.636965 CAGATCATGGATCAACCTTACGATC 59.363 44.000 8.75 0.00 41.12 3.69
2843 2872 3.977427 TCATGGATCAACCTTACGATCG 58.023 45.455 14.88 14.88 39.16 3.69
2873 2904 4.414337 AGGAGGCTTGAAGTGATGATAC 57.586 45.455 0.00 0.00 0.00 2.24
2913 2953 5.586877 TCTCTTAACTTCTGTTAGCCCCTA 58.413 41.667 0.00 0.00 39.49 3.53
2926 2966 2.288525 AGCCCCTAACCTTCCTTCATT 58.711 47.619 0.00 0.00 0.00 2.57
2938 2978 4.524328 CCTTCCTTCATTTTTACCACTGCT 59.476 41.667 0.00 0.00 0.00 4.24
3003 3043 7.765307 AGATGCACTTGGTATGTAAGAAAATG 58.235 34.615 0.00 0.00 0.00 2.32
3006 3046 6.150976 TGCACTTGGTATGTAAGAAAATGAGG 59.849 38.462 0.00 0.00 0.00 3.86
3011 4611 2.122783 TGTAAGAAAATGAGGGCGGG 57.877 50.000 0.00 0.00 0.00 6.13
3111 4714 0.839946 AGTGGATAGCATGGTGGACC 59.160 55.000 7.89 8.58 0.00 4.46
3143 4746 4.800993 GTCAGTGGAGATGTCACTTAATCG 59.199 45.833 0.00 0.00 42.87 3.34
3158 4761 9.362539 GTCACTTAATCGTCCTTGAATAAACTA 57.637 33.333 0.00 0.00 0.00 2.24
3229 4832 8.338259 CACTGAAATACTGGCAATATCACTAAC 58.662 37.037 0.00 0.00 0.00 2.34
3239 4842 7.492524 TGGCAATATCACTAACTTCTAGTCTG 58.507 38.462 0.00 0.00 0.00 3.51
3260 4863 7.988028 AGTCTGAACTTTTATTGCCCTAGTATC 59.012 37.037 0.00 0.00 28.74 2.24
3261 4864 7.769044 GTCTGAACTTTTATTGCCCTAGTATCA 59.231 37.037 0.00 0.00 0.00 2.15
3262 4865 7.769044 TCTGAACTTTTATTGCCCTAGTATCAC 59.231 37.037 0.00 0.00 0.00 3.06
3263 4866 6.537301 TGAACTTTTATTGCCCTAGTATCACG 59.463 38.462 0.00 0.00 0.00 4.35
3264 4867 5.985911 ACTTTTATTGCCCTAGTATCACGT 58.014 37.500 0.00 0.00 0.00 4.49
3265 4868 7.116075 ACTTTTATTGCCCTAGTATCACGTA 57.884 36.000 0.00 0.00 0.00 3.57
3266 4869 7.558604 ACTTTTATTGCCCTAGTATCACGTAA 58.441 34.615 0.00 0.00 0.00 3.18
3268 4871 6.964807 TTATTGCCCTAGTATCACGTAAGA 57.035 37.500 0.00 0.00 43.62 2.10
3269 4872 7.534723 TTATTGCCCTAGTATCACGTAAGAT 57.465 36.000 0.00 0.00 43.62 2.40
3270 4873 8.640063 TTATTGCCCTAGTATCACGTAAGATA 57.360 34.615 0.00 0.00 43.62 1.98
3271 4874 5.954296 TGCCCTAGTATCACGTAAGATAC 57.046 43.478 14.96 14.96 46.82 2.24
3279 4882 4.778534 ATCACGTAAGATACATACCGGG 57.221 45.455 6.32 0.00 43.62 5.73
3280 4883 3.819368 TCACGTAAGATACATACCGGGA 58.181 45.455 6.32 0.00 43.62 5.14
3281 4884 3.817084 TCACGTAAGATACATACCGGGAG 59.183 47.826 6.32 0.00 43.62 4.30
3297 4900 2.538760 AGGAACCCAGCCTCCTCA 59.461 61.111 0.00 0.00 37.53 3.86
3298 4901 1.083706 AGGAACCCAGCCTCCTCAT 59.916 57.895 0.00 0.00 37.53 2.90
3299 4902 0.343372 AGGAACCCAGCCTCCTCATA 59.657 55.000 0.00 0.00 37.53 2.15
3300 4903 0.761802 GGAACCCAGCCTCCTCATAG 59.238 60.000 0.00 0.00 0.00 2.23
3301 4904 1.501582 GAACCCAGCCTCCTCATAGT 58.498 55.000 0.00 0.00 0.00 2.12
3302 4905 1.840635 GAACCCAGCCTCCTCATAGTT 59.159 52.381 0.00 0.00 0.00 2.24
3303 4906 1.972588 ACCCAGCCTCCTCATAGTTT 58.027 50.000 0.00 0.00 0.00 2.66
3304 4907 3.130734 ACCCAGCCTCCTCATAGTTTA 57.869 47.619 0.00 0.00 0.00 2.01
3305 4908 3.041946 ACCCAGCCTCCTCATAGTTTAG 58.958 50.000 0.00 0.00 0.00 1.85
3306 4909 2.224402 CCCAGCCTCCTCATAGTTTAGC 60.224 54.545 0.00 0.00 0.00 3.09
3307 4910 2.546795 CCAGCCTCCTCATAGTTTAGCG 60.547 54.545 0.00 0.00 0.00 4.26
3308 4911 1.069358 AGCCTCCTCATAGTTTAGCGC 59.931 52.381 0.00 0.00 0.00 5.92
3309 4912 1.069358 GCCTCCTCATAGTTTAGCGCT 59.931 52.381 17.26 17.26 0.00 5.92
3310 4913 2.483889 GCCTCCTCATAGTTTAGCGCTT 60.484 50.000 18.68 0.00 0.00 4.68
3311 4914 3.385577 CCTCCTCATAGTTTAGCGCTTC 58.614 50.000 18.68 7.06 0.00 3.86
3312 4915 3.385577 CTCCTCATAGTTTAGCGCTTCC 58.614 50.000 18.68 3.51 0.00 3.46
3313 4916 3.031736 TCCTCATAGTTTAGCGCTTCCT 58.968 45.455 18.68 11.91 0.00 3.36
3314 4917 3.126831 CCTCATAGTTTAGCGCTTCCTG 58.873 50.000 18.68 5.49 0.00 3.86
3315 4918 3.126831 CTCATAGTTTAGCGCTTCCTGG 58.873 50.000 18.68 6.54 0.00 4.45
3316 4919 1.599542 CATAGTTTAGCGCTTCCTGGC 59.400 52.381 18.68 0.18 0.00 4.85
3317 4920 0.107848 TAGTTTAGCGCTTCCTGGCC 60.108 55.000 18.68 0.00 0.00 5.36
3318 4921 2.435938 TTTAGCGCTTCCTGGCCG 60.436 61.111 18.68 0.00 0.00 6.13
3319 4922 3.248446 TTTAGCGCTTCCTGGCCGT 62.248 57.895 18.68 0.00 0.00 5.68
3320 4923 3.659089 TTAGCGCTTCCTGGCCGTC 62.659 63.158 18.68 0.00 0.00 4.79
3324 4927 4.162690 GCTTCCTGGCCGTCGGAT 62.163 66.667 17.49 0.00 0.00 4.18
3325 4928 2.107141 CTTCCTGGCCGTCGGATC 59.893 66.667 17.49 6.79 0.00 3.36
3326 4929 2.363795 TTCCTGGCCGTCGGATCT 60.364 61.111 17.49 0.00 0.00 2.75
3327 4930 2.635229 CTTCCTGGCCGTCGGATCTG 62.635 65.000 17.49 9.91 0.00 2.90
3328 4931 4.227134 CCTGGCCGTCGGATCTGG 62.227 72.222 17.49 14.97 0.00 3.86
3329 4932 3.461773 CTGGCCGTCGGATCTGGT 61.462 66.667 17.49 0.00 0.00 4.00
3330 4933 3.432051 CTGGCCGTCGGATCTGGTC 62.432 68.421 17.49 0.00 0.00 4.02
3331 4934 4.222847 GGCCGTCGGATCTGGTCC 62.223 72.222 17.49 0.00 44.10 4.46
3332 4935 3.148279 GCCGTCGGATCTGGTCCT 61.148 66.667 17.49 0.00 45.46 3.85
3333 4936 2.722201 GCCGTCGGATCTGGTCCTT 61.722 63.158 17.49 0.00 45.46 3.36
3334 4937 1.141881 CCGTCGGATCTGGTCCTTG 59.858 63.158 4.91 0.00 45.46 3.61
3335 4938 1.320344 CCGTCGGATCTGGTCCTTGA 61.320 60.000 4.91 0.00 45.46 3.02
3336 4939 0.747255 CGTCGGATCTGGTCCTTGAT 59.253 55.000 5.25 0.00 45.46 2.57
3337 4940 1.536922 CGTCGGATCTGGTCCTTGATG 60.537 57.143 5.25 0.00 45.46 3.07
3338 4941 1.482593 GTCGGATCTGGTCCTTGATGT 59.517 52.381 5.25 0.00 45.46 3.06
3339 4942 1.482182 TCGGATCTGGTCCTTGATGTG 59.518 52.381 5.25 0.00 45.46 3.21
3340 4943 1.208052 CGGATCTGGTCCTTGATGTGT 59.792 52.381 5.25 0.00 45.46 3.72
3341 4944 2.355108 CGGATCTGGTCCTTGATGTGTT 60.355 50.000 5.25 0.00 45.46 3.32
3342 4945 3.274288 GGATCTGGTCCTTGATGTGTTC 58.726 50.000 0.00 0.00 44.16 3.18
3343 4946 3.054802 GGATCTGGTCCTTGATGTGTTCT 60.055 47.826 0.00 0.00 44.16 3.01
3344 4947 3.685139 TCTGGTCCTTGATGTGTTCTC 57.315 47.619 0.00 0.00 0.00 2.87
3345 4948 2.972021 TCTGGTCCTTGATGTGTTCTCA 59.028 45.455 0.00 0.00 0.00 3.27
3346 4949 3.584406 TCTGGTCCTTGATGTGTTCTCAT 59.416 43.478 0.00 0.00 0.00 2.90
3347 4950 3.937706 CTGGTCCTTGATGTGTTCTCATC 59.062 47.826 7.61 7.61 42.95 2.92
3348 4951 3.274288 GGTCCTTGATGTGTTCTCATCC 58.726 50.000 10.84 0.00 42.24 3.51
3349 4952 2.932614 GTCCTTGATGTGTTCTCATCCG 59.067 50.000 10.84 4.37 42.24 4.18
3350 4953 1.667724 CCTTGATGTGTTCTCATCCGC 59.332 52.381 10.84 0.00 42.24 5.54
3351 4954 1.667724 CTTGATGTGTTCTCATCCGCC 59.332 52.381 10.84 0.00 42.24 6.13
3352 4955 0.904649 TGATGTGTTCTCATCCGCCT 59.095 50.000 10.84 0.00 42.24 5.52
3353 4956 1.293924 GATGTGTTCTCATCCGCCTG 58.706 55.000 4.20 0.00 38.47 4.85
3354 4957 0.904649 ATGTGTTCTCATCCGCCTGA 59.095 50.000 0.00 0.00 0.00 3.86
3355 4958 0.904649 TGTGTTCTCATCCGCCTGAT 59.095 50.000 0.00 0.00 0.00 2.90
3356 4959 1.134699 TGTGTTCTCATCCGCCTGATC 60.135 52.381 0.00 0.00 0.00 2.92
3357 4960 1.134699 GTGTTCTCATCCGCCTGATCA 60.135 52.381 0.00 0.00 0.00 2.92
3358 4961 1.134699 TGTTCTCATCCGCCTGATCAC 60.135 52.381 0.00 0.00 0.00 3.06
3359 4962 0.103026 TTCTCATCCGCCTGATCACG 59.897 55.000 0.00 0.00 0.00 4.35
3360 4963 0.751643 TCTCATCCGCCTGATCACGA 60.752 55.000 7.25 0.00 0.00 4.35
3361 4964 0.318529 CTCATCCGCCTGATCACGAG 60.319 60.000 7.25 0.00 0.00 4.18
3362 4965 0.751643 TCATCCGCCTGATCACGAGA 60.752 55.000 7.25 3.95 0.00 4.04
3363 4966 0.316522 CATCCGCCTGATCACGAGAT 59.683 55.000 7.25 0.00 37.13 2.75
3364 4967 0.316522 ATCCGCCTGATCACGAGATG 59.683 55.000 7.25 0.00 33.72 2.90
3365 4968 0.751643 TCCGCCTGATCACGAGATGA 60.752 55.000 7.25 0.00 43.13 2.92
3366 4969 0.318529 CCGCCTGATCACGAGATGAG 60.319 60.000 7.25 0.62 41.91 2.90
3367 4970 0.938637 CGCCTGATCACGAGATGAGC 60.939 60.000 0.00 0.00 44.45 4.26
3376 4979 6.435430 GATCACGAGATGAGCAGATATAGT 57.565 41.667 0.00 0.00 43.60 2.12
3377 4980 5.871465 TCACGAGATGAGCAGATATAGTC 57.129 43.478 0.00 0.00 31.91 2.59
3378 4981 4.697828 TCACGAGATGAGCAGATATAGTCC 59.302 45.833 0.00 0.00 31.91 3.85
3379 4982 3.687212 ACGAGATGAGCAGATATAGTCCG 59.313 47.826 0.00 0.00 0.00 4.79
3380 4983 3.687212 CGAGATGAGCAGATATAGTCCGT 59.313 47.826 0.00 0.00 0.00 4.69
3381 4984 4.155099 CGAGATGAGCAGATATAGTCCGTT 59.845 45.833 0.00 0.00 0.00 4.44
3382 4985 5.351740 CGAGATGAGCAGATATAGTCCGTTA 59.648 44.000 0.00 0.00 0.00 3.18
3383 4986 6.456315 CGAGATGAGCAGATATAGTCCGTTAG 60.456 46.154 0.00 0.00 0.00 2.34
3384 4987 6.477253 AGATGAGCAGATATAGTCCGTTAGA 58.523 40.000 0.00 0.00 0.00 2.10
3385 4988 7.116075 AGATGAGCAGATATAGTCCGTTAGAT 58.884 38.462 0.00 0.00 0.00 1.98
3386 4989 6.745159 TGAGCAGATATAGTCCGTTAGATC 57.255 41.667 0.00 0.00 0.00 2.75
3387 4990 5.351740 TGAGCAGATATAGTCCGTTAGATCG 59.648 44.000 0.00 0.00 0.00 3.69
3388 4991 5.489249 AGCAGATATAGTCCGTTAGATCGA 58.511 41.667 0.00 0.00 0.00 3.59
3389 4992 5.583061 AGCAGATATAGTCCGTTAGATCGAG 59.417 44.000 0.00 0.00 0.00 4.04
3390 4993 5.220700 GCAGATATAGTCCGTTAGATCGAGG 60.221 48.000 0.00 0.00 0.00 4.63
3391 4994 4.877251 AGATATAGTCCGTTAGATCGAGGC 59.123 45.833 0.00 0.00 0.00 4.70
3392 4995 1.224075 TAGTCCGTTAGATCGAGGCG 58.776 55.000 0.00 0.00 0.00 5.52
3393 4996 0.463295 AGTCCGTTAGATCGAGGCGA 60.463 55.000 0.00 0.00 41.13 5.54
3394 4997 0.041135 GTCCGTTAGATCGAGGCGAG 60.041 60.000 0.00 0.00 39.91 5.03
3395 4998 0.463295 TCCGTTAGATCGAGGCGAGT 60.463 55.000 0.00 0.00 39.91 4.18
3396 4999 0.041135 CCGTTAGATCGAGGCGAGTC 60.041 60.000 0.00 0.00 39.91 3.36
3397 5000 0.656259 CGTTAGATCGAGGCGAGTCA 59.344 55.000 0.00 0.00 39.91 3.41
3398 5001 1.595003 CGTTAGATCGAGGCGAGTCAC 60.595 57.143 0.00 0.00 39.91 3.67
3399 5002 1.671845 GTTAGATCGAGGCGAGTCACT 59.328 52.381 0.00 0.00 39.91 3.41
3400 5003 1.300481 TAGATCGAGGCGAGTCACTG 58.700 55.000 0.00 0.00 39.91 3.66
3401 5004 0.678366 AGATCGAGGCGAGTCACTGT 60.678 55.000 0.00 0.00 39.91 3.55
3402 5005 1.015109 GATCGAGGCGAGTCACTGTA 58.985 55.000 0.00 0.00 39.91 2.74
3403 5006 1.003331 GATCGAGGCGAGTCACTGTAG 60.003 57.143 0.00 0.00 39.91 2.74
3404 5007 0.036671 TCGAGGCGAGTCACTGTAGA 60.037 55.000 0.00 0.00 0.00 2.59
3405 5008 1.018148 CGAGGCGAGTCACTGTAGAT 58.982 55.000 0.00 0.00 0.00 1.98
3406 5009 1.003331 CGAGGCGAGTCACTGTAGATC 60.003 57.143 0.00 0.00 0.00 2.75
3407 5010 1.003331 GAGGCGAGTCACTGTAGATCG 60.003 57.143 0.00 4.07 36.51 3.69
3408 5011 1.015109 GGCGAGTCACTGTAGATCGA 58.985 55.000 10.62 0.00 35.47 3.59
3409 5012 1.400846 GGCGAGTCACTGTAGATCGAA 59.599 52.381 10.62 0.00 35.47 3.71
3410 5013 2.159421 GGCGAGTCACTGTAGATCGAAA 60.159 50.000 10.62 0.00 35.47 3.46
3411 5014 2.847133 GCGAGTCACTGTAGATCGAAAC 59.153 50.000 10.62 0.00 35.47 2.78
3412 5015 3.669824 GCGAGTCACTGTAGATCGAAACA 60.670 47.826 10.62 0.00 35.47 2.83
3413 5016 4.092120 CGAGTCACTGTAGATCGAAACAG 58.908 47.826 18.86 18.86 46.84 3.16
3421 5024 6.525121 CTGTAGATCGAAACAGTGTCAAAA 57.475 37.500 14.48 0.00 38.62 2.44
3422 5025 6.281848 TGTAGATCGAAACAGTGTCAAAAC 57.718 37.500 0.00 0.00 0.00 2.43
3423 5026 6.046593 TGTAGATCGAAACAGTGTCAAAACT 58.953 36.000 0.00 0.00 0.00 2.66
3424 5027 6.537301 TGTAGATCGAAACAGTGTCAAAACTT 59.463 34.615 0.00 0.00 0.00 2.66
3425 5028 6.049263 AGATCGAAACAGTGTCAAAACTTC 57.951 37.500 0.00 0.00 0.00 3.01
3426 5029 4.253352 TCGAAACAGTGTCAAAACTTCG 57.747 40.909 15.89 15.89 32.02 3.79
3427 5030 3.680937 TCGAAACAGTGTCAAAACTTCGT 59.319 39.130 19.44 0.00 32.43 3.85
3428 5031 3.778718 CGAAACAGTGTCAAAACTTCGTG 59.221 43.478 14.44 0.00 0.00 4.35
3429 5032 2.825086 ACAGTGTCAAAACTTCGTGC 57.175 45.000 0.00 0.00 0.00 5.34
3430 5033 1.400494 ACAGTGTCAAAACTTCGTGCC 59.600 47.619 0.00 0.00 0.00 5.01
3431 5034 1.400142 CAGTGTCAAAACTTCGTGCCA 59.600 47.619 0.00 0.00 0.00 4.92
3432 5035 1.400494 AGTGTCAAAACTTCGTGCCAC 59.600 47.619 0.00 0.00 0.00 5.01
3433 5036 0.736053 TGTCAAAACTTCGTGCCACC 59.264 50.000 0.00 0.00 0.00 4.61
3434 5037 0.316689 GTCAAAACTTCGTGCCACCG 60.317 55.000 0.00 0.00 0.00 4.94
3435 5038 1.657181 CAAAACTTCGTGCCACCGC 60.657 57.895 0.00 0.00 0.00 5.68
3436 5039 1.822186 AAAACTTCGTGCCACCGCT 60.822 52.632 0.00 0.00 35.36 5.52
3437 5040 1.381165 AAAACTTCGTGCCACCGCTT 61.381 50.000 0.00 0.00 35.36 4.68
3438 5041 2.058829 AAACTTCGTGCCACCGCTTG 62.059 55.000 0.00 0.00 35.36 4.01
3439 5042 2.972505 CTTCGTGCCACCGCTTGT 60.973 61.111 0.00 0.00 35.36 3.16
3440 5043 1.666553 CTTCGTGCCACCGCTTGTA 60.667 57.895 0.00 0.00 35.36 2.41
3441 5044 1.225376 CTTCGTGCCACCGCTTGTAA 61.225 55.000 0.00 0.00 35.36 2.41
3442 5045 0.604243 TTCGTGCCACCGCTTGTAAT 60.604 50.000 0.00 0.00 35.36 1.89
3443 5046 0.604243 TCGTGCCACCGCTTGTAATT 60.604 50.000 0.00 0.00 35.36 1.40
3444 5047 1.080298 CGTGCCACCGCTTGTAATTA 58.920 50.000 0.00 0.00 35.36 1.40
3445 5048 1.668751 CGTGCCACCGCTTGTAATTAT 59.331 47.619 0.00 0.00 35.36 1.28
3446 5049 2.286184 CGTGCCACCGCTTGTAATTATC 60.286 50.000 0.00 0.00 35.36 1.75
3447 5050 2.680841 GTGCCACCGCTTGTAATTATCA 59.319 45.455 0.00 0.00 35.36 2.15
3448 5051 2.942376 TGCCACCGCTTGTAATTATCAG 59.058 45.455 0.00 0.00 35.36 2.90
3449 5052 3.202906 GCCACCGCTTGTAATTATCAGA 58.797 45.455 0.00 0.00 0.00 3.27
3450 5053 3.815401 GCCACCGCTTGTAATTATCAGAT 59.185 43.478 0.00 0.00 0.00 2.90
3451 5054 4.083802 GCCACCGCTTGTAATTATCAGATC 60.084 45.833 0.00 0.00 0.00 2.75
3452 5055 5.300752 CCACCGCTTGTAATTATCAGATCT 58.699 41.667 0.00 0.00 0.00 2.75
3453 5056 5.406780 CCACCGCTTGTAATTATCAGATCTC 59.593 44.000 0.00 0.00 0.00 2.75
3454 5057 5.985530 CACCGCTTGTAATTATCAGATCTCA 59.014 40.000 0.00 0.00 0.00 3.27
3455 5058 5.986135 ACCGCTTGTAATTATCAGATCTCAC 59.014 40.000 0.00 0.00 0.00 3.51
3456 5059 5.406780 CCGCTTGTAATTATCAGATCTCACC 59.593 44.000 0.00 0.00 0.00 4.02
3457 5060 5.117745 CGCTTGTAATTATCAGATCTCACCG 59.882 44.000 0.00 0.00 0.00 4.94
3458 5061 6.216569 GCTTGTAATTATCAGATCTCACCGA 58.783 40.000 0.00 0.00 0.00 4.69
3459 5062 6.364706 GCTTGTAATTATCAGATCTCACCGAG 59.635 42.308 0.00 0.00 0.00 4.63
3460 5063 6.332735 TGTAATTATCAGATCTCACCGAGG 57.667 41.667 0.00 0.00 0.00 4.63
3461 5064 4.881019 AATTATCAGATCTCACCGAGGG 57.119 45.455 0.00 0.00 0.00 4.30
3462 5065 1.621992 TATCAGATCTCACCGAGGGC 58.378 55.000 0.00 0.00 0.00 5.19
3463 5066 0.397675 ATCAGATCTCACCGAGGGCA 60.398 55.000 0.00 0.00 0.00 5.36
3464 5067 0.614697 TCAGATCTCACCGAGGGCAA 60.615 55.000 0.00 0.00 0.00 4.52
3465 5068 0.250234 CAGATCTCACCGAGGGCAAA 59.750 55.000 0.00 0.00 0.00 3.68
3466 5069 0.539051 AGATCTCACCGAGGGCAAAG 59.461 55.000 0.00 0.00 0.00 2.77
3467 5070 1.078143 ATCTCACCGAGGGCAAAGC 60.078 57.895 0.00 0.00 0.00 3.51
3468 5071 1.557269 ATCTCACCGAGGGCAAAGCT 61.557 55.000 0.00 0.00 0.00 3.74
3469 5072 2.032528 TCACCGAGGGCAAAGCTG 59.967 61.111 0.00 0.00 0.00 4.24
3470 5073 3.058160 CACCGAGGGCAAAGCTGG 61.058 66.667 0.00 0.00 0.00 4.85
3471 5074 4.351054 ACCGAGGGCAAAGCTGGG 62.351 66.667 0.00 0.00 0.00 4.45
3472 5075 4.033776 CCGAGGGCAAAGCTGGGA 62.034 66.667 0.00 0.00 0.00 4.37
3473 5076 2.273449 CGAGGGCAAAGCTGGGAT 59.727 61.111 0.00 0.00 0.00 3.85
3474 5077 1.379044 CGAGGGCAAAGCTGGGATT 60.379 57.895 0.00 0.00 0.00 3.01
3475 5078 0.967380 CGAGGGCAAAGCTGGGATTT 60.967 55.000 0.00 0.00 0.00 2.17
3476 5079 1.269958 GAGGGCAAAGCTGGGATTTT 58.730 50.000 0.00 0.00 0.00 1.82
3477 5080 1.625315 GAGGGCAAAGCTGGGATTTTT 59.375 47.619 0.00 0.00 0.00 1.94
3478 5081 1.625315 AGGGCAAAGCTGGGATTTTTC 59.375 47.619 0.00 0.00 0.00 2.29
3479 5082 1.347378 GGGCAAAGCTGGGATTTTTCA 59.653 47.619 0.00 0.00 0.00 2.69
3480 5083 2.026915 GGGCAAAGCTGGGATTTTTCAT 60.027 45.455 0.00 0.00 0.00 2.57
3481 5084 3.004862 GGCAAAGCTGGGATTTTTCATG 58.995 45.455 0.00 0.00 0.00 3.07
3482 5085 3.004862 GCAAAGCTGGGATTTTTCATGG 58.995 45.455 0.00 0.00 0.00 3.66
3483 5086 3.602483 CAAAGCTGGGATTTTTCATGGG 58.398 45.455 0.00 0.00 0.00 4.00
3484 5087 1.197812 AGCTGGGATTTTTCATGGGC 58.802 50.000 0.00 0.00 0.00 5.36
3485 5088 0.178767 GCTGGGATTTTTCATGGGCC 59.821 55.000 0.00 0.00 0.00 5.80
3486 5089 0.832626 CTGGGATTTTTCATGGGCCC 59.167 55.000 17.59 17.59 36.11 5.80
3487 5090 0.975040 TGGGATTTTTCATGGGCCCG 60.975 55.000 19.37 3.22 38.42 6.13
3488 5091 1.143838 GGATTTTTCATGGGCCCGC 59.856 57.895 19.37 0.00 0.00 6.13
3489 5092 1.226945 GATTTTTCATGGGCCCGCG 60.227 57.895 19.37 11.07 0.00 6.46
3490 5093 2.627510 GATTTTTCATGGGCCCGCGG 62.628 60.000 21.04 21.04 0.00 6.46
3491 5094 3.870024 TTTTTCATGGGCCCGCGGA 62.870 57.895 30.73 11.82 0.00 5.54
3492 5095 3.870024 TTTTCATGGGCCCGCGGAA 62.870 57.895 30.73 17.46 0.00 4.30
3493 5096 3.870024 TTTCATGGGCCCGCGGAAA 62.870 57.895 30.73 23.75 0.00 3.13
3506 5109 3.836151 GGAAACGTGTTGGTGGCT 58.164 55.556 0.00 0.00 0.00 4.75
3507 5110 1.358759 GGAAACGTGTTGGTGGCTG 59.641 57.895 0.00 0.00 0.00 4.85
3508 5111 1.098712 GGAAACGTGTTGGTGGCTGA 61.099 55.000 0.00 0.00 0.00 4.26
3509 5112 0.951558 GAAACGTGTTGGTGGCTGAT 59.048 50.000 0.00 0.00 0.00 2.90
3510 5113 1.336755 GAAACGTGTTGGTGGCTGATT 59.663 47.619 0.00 0.00 0.00 2.57
3511 5114 0.667993 AACGTGTTGGTGGCTGATTG 59.332 50.000 0.00 0.00 0.00 2.67
3512 5115 1.172180 ACGTGTTGGTGGCTGATTGG 61.172 55.000 0.00 0.00 0.00 3.16
3513 5116 1.290009 GTGTTGGTGGCTGATTGGC 59.710 57.895 0.00 0.00 42.18 4.52
3522 5125 2.825836 CTGATTGGCCTGCGGGTC 60.826 66.667 10.01 10.01 37.81 4.46
3523 5126 4.776322 TGATTGGCCTGCGGGTCG 62.776 66.667 12.53 0.00 40.80 4.79
3524 5127 4.467084 GATTGGCCTGCGGGTCGA 62.467 66.667 9.04 9.04 40.80 4.20
3525 5128 3.757248 GATTGGCCTGCGGGTCGAT 62.757 63.158 19.44 19.44 43.58 3.59
3526 5129 4.776322 TTGGCCTGCGGGTCGATG 62.776 66.667 12.53 0.00 40.80 3.84
3528 5131 4.899239 GGCCTGCGGGTCGATGAG 62.899 72.222 14.55 0.00 34.45 2.90
3529 5132 4.899239 GCCTGCGGGTCGATGAGG 62.899 72.222 14.55 0.00 34.45 3.86
3530 5133 4.899239 CCTGCGGGTCGATGAGGC 62.899 72.222 2.29 0.00 0.00 4.70
3533 5136 4.933064 GCGGGTCGATGAGGCGAG 62.933 72.222 0.00 0.00 41.49 5.03
3534 5137 4.271816 CGGGTCGATGAGGCGAGG 62.272 72.222 0.00 0.00 41.49 4.63
3535 5138 3.917760 GGGTCGATGAGGCGAGGG 61.918 72.222 0.00 0.00 41.49 4.30
3536 5139 3.917760 GGTCGATGAGGCGAGGGG 61.918 72.222 0.00 0.00 41.49 4.79
3537 5140 3.917760 GTCGATGAGGCGAGGGGG 61.918 72.222 0.00 0.00 41.49 5.40
3538 5141 4.137615 TCGATGAGGCGAGGGGGA 62.138 66.667 0.00 0.00 35.01 4.81
3539 5142 3.610669 CGATGAGGCGAGGGGGAG 61.611 72.222 0.00 0.00 0.00 4.30
3540 5143 3.934962 GATGAGGCGAGGGGGAGC 61.935 72.222 0.00 0.00 0.00 4.70
3547 5150 3.470888 CGAGGGGGAGCGACCAAT 61.471 66.667 5.45 0.00 41.20 3.16
3548 5151 2.506472 GAGGGGGAGCGACCAATC 59.494 66.667 5.45 0.00 41.20 2.67
3549 5152 3.090532 AGGGGGAGCGACCAATCC 61.091 66.667 5.45 4.00 41.20 3.01
3553 5156 2.674754 GGAGCGACCAATCCCCAA 59.325 61.111 0.00 0.00 38.79 4.12
3554 5157 1.749258 GGAGCGACCAATCCCCAAC 60.749 63.158 0.00 0.00 38.79 3.77
3555 5158 1.299976 GAGCGACCAATCCCCAACT 59.700 57.895 0.00 0.00 0.00 3.16
3556 5159 0.744771 GAGCGACCAATCCCCAACTC 60.745 60.000 0.00 0.00 0.00 3.01
3557 5160 2.106683 GCGACCAATCCCCAACTCG 61.107 63.158 0.00 0.00 0.00 4.18
3558 5161 1.594833 CGACCAATCCCCAACTCGA 59.405 57.895 0.00 0.00 0.00 4.04
3559 5162 0.739813 CGACCAATCCCCAACTCGAC 60.740 60.000 0.00 0.00 0.00 4.20
3560 5163 0.392595 GACCAATCCCCAACTCGACC 60.393 60.000 0.00 0.00 0.00 4.79
3561 5164 0.840722 ACCAATCCCCAACTCGACCT 60.841 55.000 0.00 0.00 0.00 3.85
3562 5165 0.107654 CCAATCCCCAACTCGACCTC 60.108 60.000 0.00 0.00 0.00 3.85
3563 5166 0.107654 CAATCCCCAACTCGACCTCC 60.108 60.000 0.00 0.00 0.00 4.30
3564 5167 1.272554 AATCCCCAACTCGACCTCCC 61.273 60.000 0.00 0.00 0.00 4.30
3565 5168 2.182858 ATCCCCAACTCGACCTCCCT 62.183 60.000 0.00 0.00 0.00 4.20
3566 5169 2.359967 CCCCAACTCGACCTCCCTC 61.360 68.421 0.00 0.00 0.00 4.30
3567 5170 2.711922 CCCAACTCGACCTCCCTCG 61.712 68.421 0.00 0.00 34.83 4.63
3568 5171 1.677966 CCAACTCGACCTCCCTCGA 60.678 63.158 0.00 0.00 40.37 4.04
3569 5172 1.038130 CCAACTCGACCTCCCTCGAT 61.038 60.000 0.00 0.00 41.71 3.59
3570 5173 0.382515 CAACTCGACCTCCCTCGATC 59.617 60.000 0.00 0.00 41.71 3.69
3571 5174 0.256464 AACTCGACCTCCCTCGATCT 59.744 55.000 0.00 0.00 41.71 2.75
3572 5175 0.179040 ACTCGACCTCCCTCGATCTC 60.179 60.000 0.00 0.00 41.71 2.75
3573 5176 0.887387 CTCGACCTCCCTCGATCTCC 60.887 65.000 0.00 0.00 41.71 3.71
3574 5177 1.899534 CGACCTCCCTCGATCTCCC 60.900 68.421 0.00 0.00 35.58 4.30
3575 5178 1.899534 GACCTCCCTCGATCTCCCG 60.900 68.421 0.00 0.00 0.00 5.14
3576 5179 2.196229 CCTCCCTCGATCTCCCGT 59.804 66.667 0.00 0.00 0.00 5.28
3577 5180 1.351080 ACCTCCCTCGATCTCCCGTA 61.351 60.000 0.00 0.00 0.00 4.02
3578 5181 0.890090 CCTCCCTCGATCTCCCGTAC 60.890 65.000 0.00 0.00 0.00 3.67
3579 5182 0.179026 CTCCCTCGATCTCCCGTACA 60.179 60.000 0.00 0.00 0.00 2.90
3580 5183 0.465097 TCCCTCGATCTCCCGTACAC 60.465 60.000 0.00 0.00 0.00 2.90
3581 5184 1.453762 CCCTCGATCTCCCGTACACC 61.454 65.000 0.00 0.00 0.00 4.16
3582 5185 1.453762 CCTCGATCTCCCGTACACCC 61.454 65.000 0.00 0.00 0.00 4.61
3583 5186 0.465824 CTCGATCTCCCGTACACCCT 60.466 60.000 0.00 0.00 0.00 4.34
3584 5187 0.839277 TCGATCTCCCGTACACCCTA 59.161 55.000 0.00 0.00 0.00 3.53
3585 5188 0.950116 CGATCTCCCGTACACCCTAC 59.050 60.000 0.00 0.00 0.00 3.18
3586 5189 1.326328 GATCTCCCGTACACCCTACC 58.674 60.000 0.00 0.00 0.00 3.18
3587 5190 0.632835 ATCTCCCGTACACCCTACCA 59.367 55.000 0.00 0.00 0.00 3.25
3588 5191 0.632835 TCTCCCGTACACCCTACCAT 59.367 55.000 0.00 0.00 0.00 3.55
3589 5192 1.038280 CTCCCGTACACCCTACCATC 58.962 60.000 0.00 0.00 0.00 3.51
3590 5193 0.752743 TCCCGTACACCCTACCATCG 60.753 60.000 0.00 0.00 0.00 3.84
3591 5194 1.039233 CCCGTACACCCTACCATCGT 61.039 60.000 0.00 0.00 0.00 3.73
3592 5195 0.101759 CCGTACACCCTACCATCGTG 59.898 60.000 0.00 0.00 0.00 4.35
3593 5196 0.101759 CGTACACCCTACCATCGTGG 59.898 60.000 0.00 2.92 45.02 4.94
3594 5197 0.462789 GTACACCCTACCATCGTGGG 59.537 60.000 8.57 0.00 43.37 4.61
3595 5198 0.335705 TACACCCTACCATCGTGGGA 59.664 55.000 4.11 0.00 43.23 4.37
3596 5199 1.262640 ACACCCTACCATCGTGGGAC 61.263 60.000 4.11 0.00 43.23 4.46
3597 5200 2.056223 ACCCTACCATCGTGGGACG 61.056 63.158 4.11 0.00 43.23 4.79
3598 5201 2.106332 CCTACCATCGTGGGACGC 59.894 66.667 8.57 0.00 43.23 5.19
3599 5202 2.717044 CCTACCATCGTGGGACGCA 61.717 63.158 8.57 0.00 43.23 5.24
3600 5203 1.226974 CTACCATCGTGGGACGCAG 60.227 63.158 8.57 0.00 43.37 5.18
3601 5204 3.365291 TACCATCGTGGGACGCAGC 62.365 63.158 8.57 0.00 43.37 5.25
3602 5205 4.457496 CCATCGTGGGACGCAGCT 62.457 66.667 0.00 0.00 42.21 4.24
3603 5206 2.887568 CATCGTGGGACGCAGCTC 60.888 66.667 0.00 0.00 42.21 4.09
3604 5207 4.148825 ATCGTGGGACGCAGCTCC 62.149 66.667 0.00 3.00 42.21 4.70
3606 5209 4.803426 CGTGGGACGCAGCTCCTC 62.803 72.222 9.85 1.13 39.91 3.71
3607 5210 3.386237 GTGGGACGCAGCTCCTCT 61.386 66.667 9.85 0.00 39.55 3.69
3608 5211 3.385384 TGGGACGCAGCTCCTCTG 61.385 66.667 9.85 0.00 45.62 3.35
3609 5212 3.071206 GGGACGCAGCTCCTCTGA 61.071 66.667 9.85 0.00 45.72 3.27
3610 5213 2.183046 GGACGCAGCTCCTCTGAC 59.817 66.667 4.17 0.00 45.72 3.51
3611 5214 2.202544 GACGCAGCTCCTCTGACG 60.203 66.667 0.00 2.37 45.72 4.35
3612 5215 2.986413 ACGCAGCTCCTCTGACGT 60.986 61.111 0.00 0.00 45.72 4.34
3613 5216 1.645704 GACGCAGCTCCTCTGACGTA 61.646 60.000 11.86 0.00 46.96 3.57
3614 5217 1.226435 CGCAGCTCCTCTGACGTAC 60.226 63.158 0.00 0.00 45.72 3.67
3615 5218 1.226435 GCAGCTCCTCTGACGTACG 60.226 63.158 15.01 15.01 45.72 3.67
3616 5219 1.429825 CAGCTCCTCTGACGTACGG 59.570 63.158 21.06 1.50 45.72 4.02
3617 5220 2.102553 GCTCCTCTGACGTACGGC 59.897 66.667 21.06 18.72 0.00 5.68
3619 5222 3.736482 CTCCTCTGACGTACGGCGC 62.736 68.421 21.06 0.00 46.11 6.53
3620 5223 4.111016 CCTCTGACGTACGGCGCA 62.111 66.667 21.06 13.22 46.11 6.09
3621 5224 2.874780 CTCTGACGTACGGCGCAC 60.875 66.667 21.06 2.50 46.11 5.34
3622 5225 3.324099 CTCTGACGTACGGCGCACT 62.324 63.158 21.06 0.00 46.11 4.40
3623 5226 2.874780 CTGACGTACGGCGCACTC 60.875 66.667 21.06 7.29 46.11 3.51
3624 5227 4.746951 TGACGTACGGCGCACTCG 62.747 66.667 21.06 6.32 46.11 4.18
3637 5240 2.335369 ACTCGCTGACGTGTGGAC 59.665 61.111 0.00 0.00 43.76 4.02
3638 5241 2.430921 CTCGCTGACGTGTGGACC 60.431 66.667 0.00 0.00 41.18 4.46
3639 5242 3.916392 CTCGCTGACGTGTGGACCC 62.916 68.421 0.00 0.00 41.18 4.46
3642 5245 3.299977 CTGACGTGTGGACCCGGA 61.300 66.667 0.73 0.00 0.00 5.14
3643 5246 3.569049 CTGACGTGTGGACCCGGAC 62.569 68.421 0.73 0.00 0.00 4.79
3644 5247 4.368543 GACGTGTGGACCCGGACC 62.369 72.222 0.73 6.89 0.00 4.46
3666 5269 3.041940 CGTCAGTGGCCCAACGTC 61.042 66.667 0.00 0.00 0.00 4.34
3667 5270 2.110213 GTCAGTGGCCCAACGTCA 59.890 61.111 0.00 0.00 0.00 4.35
3668 5271 1.961277 GTCAGTGGCCCAACGTCAG 60.961 63.158 0.00 0.00 0.00 3.51
3669 5272 2.669569 CAGTGGCCCAACGTCAGG 60.670 66.667 0.00 0.00 0.00 3.86
3670 5273 3.168528 AGTGGCCCAACGTCAGGT 61.169 61.111 0.00 0.00 0.00 4.00
3671 5274 2.978010 GTGGCCCAACGTCAGGTG 60.978 66.667 0.00 0.00 34.07 4.00
3677 5280 2.340809 CAACGTCAGGTGGCCGTA 59.659 61.111 0.00 0.00 33.88 4.02
3678 5281 2.025418 CAACGTCAGGTGGCCGTAC 61.025 63.158 0.00 0.00 33.88 3.67
3679 5282 3.562779 AACGTCAGGTGGCCGTACG 62.563 63.158 8.69 8.69 40.48 3.67
3680 5283 4.047059 CGTCAGGTGGCCGTACGT 62.047 66.667 15.21 0.00 33.91 3.57
3681 5284 2.126189 GTCAGGTGGCCGTACGTC 60.126 66.667 15.21 0.00 0.00 4.34
3682 5285 2.598099 TCAGGTGGCCGTACGTCA 60.598 61.111 15.21 9.40 0.00 4.35
3683 5286 2.126071 CAGGTGGCCGTACGTCAG 60.126 66.667 15.21 0.00 0.00 3.51
3684 5287 3.379445 AGGTGGCCGTACGTCAGG 61.379 66.667 15.21 0.00 0.00 3.86
3685 5288 4.446413 GGTGGCCGTACGTCAGGG 62.446 72.222 15.21 0.00 35.13 4.45
3686 5289 4.446413 GTGGCCGTACGTCAGGGG 62.446 72.222 15.21 0.00 32.45 4.79
3687 5290 4.682334 TGGCCGTACGTCAGGGGA 62.682 66.667 15.21 0.00 32.45 4.81
3688 5291 3.152400 GGCCGTACGTCAGGGGAT 61.152 66.667 15.21 0.00 32.45 3.85
3689 5292 2.416260 GCCGTACGTCAGGGGATC 59.584 66.667 15.21 0.00 32.45 3.36
3690 5293 2.420568 GCCGTACGTCAGGGGATCA 61.421 63.158 15.21 0.00 32.45 2.92
3691 5294 1.734137 CCGTACGTCAGGGGATCAG 59.266 63.158 15.21 0.00 0.00 2.90
3692 5295 1.734137 CGTACGTCAGGGGATCAGG 59.266 63.158 7.22 0.00 0.00 3.86
3693 5296 0.750546 CGTACGTCAGGGGATCAGGA 60.751 60.000 7.22 0.00 0.00 3.86
3694 5297 1.705873 GTACGTCAGGGGATCAGGAT 58.294 55.000 0.00 0.00 0.00 3.24
3695 5298 1.614413 GTACGTCAGGGGATCAGGATC 59.386 57.143 0.00 0.55 37.11 3.36
3705 5308 2.160822 GATCAGGATCCACCATCGTG 57.839 55.000 15.82 1.08 45.29 4.35
3706 5309 0.107456 ATCAGGATCCACCATCGTGC 59.893 55.000 15.82 0.00 44.10 5.34
3707 5310 1.524621 CAGGATCCACCATCGTGCC 60.525 63.158 15.82 0.00 39.82 5.01
3708 5311 2.588877 GGATCCACCATCGTGCCG 60.589 66.667 6.95 0.00 38.79 5.69
3709 5312 3.272334 GATCCACCATCGTGCCGC 61.272 66.667 0.00 0.00 38.79 6.53
3710 5313 3.740128 GATCCACCATCGTGCCGCT 62.740 63.158 0.00 0.00 38.79 5.52
3711 5314 4.758251 TCCACCATCGTGCCGCTG 62.758 66.667 0.00 0.00 38.79 5.18
3756 5359 4.436998 GTCCCGGACCTCACGCTG 62.437 72.222 0.73 0.00 0.00 5.18
3792 5395 3.470888 CGCCGATGACCTCCCCTT 61.471 66.667 0.00 0.00 0.00 3.95
3793 5396 2.190578 GCCGATGACCTCCCCTTG 59.809 66.667 0.00 0.00 0.00 3.61
3794 5397 2.190578 CCGATGACCTCCCCTTGC 59.809 66.667 0.00 0.00 0.00 4.01
3795 5398 2.370445 CCGATGACCTCCCCTTGCT 61.370 63.158 0.00 0.00 0.00 3.91
3796 5399 1.144936 CGATGACCTCCCCTTGCTC 59.855 63.158 0.00 0.00 0.00 4.26
3797 5400 1.529309 GATGACCTCCCCTTGCTCC 59.471 63.158 0.00 0.00 0.00 4.70
3798 5401 2.317149 GATGACCTCCCCTTGCTCCG 62.317 65.000 0.00 0.00 0.00 4.63
3799 5402 4.475135 GACCTCCCCTTGCTCCGC 62.475 72.222 0.00 0.00 0.00 5.54
3802 5405 4.168291 CTCCCCTTGCTCCGCCTC 62.168 72.222 0.00 0.00 0.00 4.70
3803 5406 4.722535 TCCCCTTGCTCCGCCTCT 62.723 66.667 0.00 0.00 0.00 3.69
3804 5407 3.721706 CCCCTTGCTCCGCCTCTT 61.722 66.667 0.00 0.00 0.00 2.85
3805 5408 2.124942 CCCTTGCTCCGCCTCTTC 60.125 66.667 0.00 0.00 0.00 2.87
3806 5409 2.664081 CCCTTGCTCCGCCTCTTCT 61.664 63.158 0.00 0.00 0.00 2.85
3807 5410 1.298014 CCTTGCTCCGCCTCTTCTT 59.702 57.895 0.00 0.00 0.00 2.52
3808 5411 0.742635 CCTTGCTCCGCCTCTTCTTC 60.743 60.000 0.00 0.00 0.00 2.87
3809 5412 0.742635 CTTGCTCCGCCTCTTCTTCC 60.743 60.000 0.00 0.00 0.00 3.46
3810 5413 1.194781 TTGCTCCGCCTCTTCTTCCT 61.195 55.000 0.00 0.00 0.00 3.36
3811 5414 1.153469 GCTCCGCCTCTTCTTCCTG 60.153 63.158 0.00 0.00 0.00 3.86
3812 5415 1.893919 GCTCCGCCTCTTCTTCCTGT 61.894 60.000 0.00 0.00 0.00 4.00
3813 5416 0.174617 CTCCGCCTCTTCTTCCTGTC 59.825 60.000 0.00 0.00 0.00 3.51
3814 5417 1.219393 CCGCCTCTTCTTCCTGTCC 59.781 63.158 0.00 0.00 0.00 4.02
3815 5418 1.153745 CGCCTCTTCTTCCTGTCCG 60.154 63.158 0.00 0.00 0.00 4.79
3816 5419 1.219393 GCCTCTTCTTCCTGTCCGG 59.781 63.158 0.00 0.00 0.00 5.14
3817 5420 1.219393 CCTCTTCTTCCTGTCCGGC 59.781 63.158 0.00 0.00 0.00 6.13
3818 5421 1.261238 CCTCTTCTTCCTGTCCGGCT 61.261 60.000 0.00 0.00 0.00 5.52
3819 5422 1.475403 CTCTTCTTCCTGTCCGGCTA 58.525 55.000 0.00 0.00 0.00 3.93
3820 5423 1.407258 CTCTTCTTCCTGTCCGGCTAG 59.593 57.143 0.00 0.00 0.00 3.42
3821 5424 1.005569 TCTTCTTCCTGTCCGGCTAGA 59.994 52.381 0.00 0.00 0.00 2.43
3822 5425 1.825474 CTTCTTCCTGTCCGGCTAGAA 59.175 52.381 0.00 0.00 34.27 2.10
3823 5426 1.183549 TCTTCCTGTCCGGCTAGAAC 58.816 55.000 0.00 0.00 0.00 3.01
3824 5427 0.175989 CTTCCTGTCCGGCTAGAACC 59.824 60.000 0.00 0.00 0.00 3.62
3825 5428 0.543410 TTCCTGTCCGGCTAGAACCA 60.543 55.000 0.00 0.00 0.00 3.67
3826 5429 1.218316 CCTGTCCGGCTAGAACCAC 59.782 63.158 0.00 0.00 0.00 4.16
3827 5430 1.153823 CTGTCCGGCTAGAACCACG 60.154 63.158 0.00 0.00 0.00 4.94
3829 5432 3.766691 TCCGGCTAGAACCACGGC 61.767 66.667 0.00 0.00 45.58 5.68
3832 5435 4.752879 GGCTAGAACCACGGCGCA 62.753 66.667 10.83 0.00 0.00 6.09
3833 5436 3.488090 GCTAGAACCACGGCGCAC 61.488 66.667 10.83 0.00 0.00 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
461 462 4.753107 CGTCCTGTAGAACTTGCCTTTTAA 59.247 41.667 0.00 0.00 0.00 1.52
968 969 3.618150 GCTGCTTCAACAACAACAACAAT 59.382 39.130 0.00 0.00 0.00 2.71
985 986 1.811778 TCCATCCAATAGAGGCTGCT 58.188 50.000 0.00 0.00 0.00 4.24
1006 1007 4.804108 CCAGATAGTCGATTGCTTCCTAG 58.196 47.826 0.00 0.00 0.00 3.02
1030 1031 2.147150 GCCGATTTGCTTAGGGATCTC 58.853 52.381 0.00 0.00 0.00 2.75
1506 1507 9.321562 GGTAGTATAATCTTTTGATGTTTCCGA 57.678 33.333 0.00 0.00 39.48 4.55
1729 1730 3.821421 ACCGTATGATCCTTCTCCAAC 57.179 47.619 0.00 0.00 0.00 3.77
1789 1790 4.326826 CCTGCATGGAGTTTCTTTACAGA 58.673 43.478 13.65 0.00 38.35 3.41
1880 1881 3.002791 CCATACAACTTGACGATGCTGT 58.997 45.455 0.00 0.00 0.00 4.40
2055 2056 2.845586 TGGGTGAACATCATGATGGAGA 59.154 45.455 33.31 17.08 42.91 3.71
2133 2134 2.231235 ACCAAAATCCGAGACAAATGCC 59.769 45.455 0.00 0.00 0.00 4.40
2181 2182 1.640428 CTAGTGCGCTCCAATTCGAA 58.360 50.000 9.73 0.00 0.00 3.71
2315 2322 1.542915 ACATTCTGCATCCAACACAGC 59.457 47.619 0.00 0.00 0.00 4.40
2426 2433 7.148423 ACCAAGTGAAGAAAGAAAATTTTGCAC 60.148 33.333 8.47 0.00 0.00 4.57
2450 2457 1.741706 CAGATGCAACTGGTCATCACC 59.258 52.381 15.79 0.00 44.10 4.02
2498 2505 1.679898 CCTCCTCAGCTTCGGGTTT 59.320 57.895 0.00 0.00 0.00 3.27
2512 2519 1.403514 CGTCTCAAGTCTTCTGCCTCC 60.404 57.143 0.00 0.00 0.00 4.30
2539 2549 3.568093 GCACTCAAACGCCACAAAT 57.432 47.368 0.00 0.00 0.00 2.32
2562 2572 1.482365 GCCTTTCTTTGGGGGAAGGAA 60.482 52.381 5.80 0.00 0.00 3.36
2614 2624 9.962783 GTACTCCATACGTAATAACTTCAGATT 57.037 33.333 0.00 0.00 0.00 2.40
2628 2642 6.403878 AGCATTTAACAAGTACTCCATACGT 58.596 36.000 0.00 0.00 38.97 3.57
2629 2643 6.903883 AGCATTTAACAAGTACTCCATACG 57.096 37.500 0.00 0.00 38.97 3.06
2630 2644 6.967199 GCAAGCATTTAACAAGTACTCCATAC 59.033 38.462 0.00 0.00 0.00 2.39
2631 2645 6.657117 TGCAAGCATTTAACAAGTACTCCATA 59.343 34.615 0.00 0.00 0.00 2.74
2632 2646 5.476599 TGCAAGCATTTAACAAGTACTCCAT 59.523 36.000 0.00 0.00 0.00 3.41
2633 2647 4.824537 TGCAAGCATTTAACAAGTACTCCA 59.175 37.500 0.00 0.00 0.00 3.86
2634 2648 5.181245 TCTGCAAGCATTTAACAAGTACTCC 59.819 40.000 0.00 0.00 0.00 3.85
2635 2649 6.241207 TCTGCAAGCATTTAACAAGTACTC 57.759 37.500 0.00 0.00 0.00 2.59
2636 2650 6.207417 ACATCTGCAAGCATTTAACAAGTACT 59.793 34.615 0.00 0.00 0.00 2.73
2637 2651 6.381801 ACATCTGCAAGCATTTAACAAGTAC 58.618 36.000 0.00 0.00 0.00 2.73
2638 2652 6.573664 ACATCTGCAAGCATTTAACAAGTA 57.426 33.333 0.00 0.00 0.00 2.24
2787 2816 4.634443 ACCGGAAGAACAATTATACAGTGC 59.366 41.667 9.46 0.00 0.00 4.40
2833 2862 4.940463 TCCTTCCAAATACGATCGTAAGG 58.060 43.478 29.89 28.70 33.99 2.69
2838 2867 2.135933 GCCTCCTTCCAAATACGATCG 58.864 52.381 14.88 14.88 0.00 3.69
2842 2871 2.985896 TCAAGCCTCCTTCCAAATACG 58.014 47.619 0.00 0.00 0.00 3.06
2843 2872 4.156739 CACTTCAAGCCTCCTTCCAAATAC 59.843 45.833 0.00 0.00 0.00 1.89
2873 2904 9.868277 AGTTAAGAGAGAACATAATGAGACAAG 57.132 33.333 0.00 0.00 0.00 3.16
2895 2930 4.432316 AGGTTAGGGGCTAACAGAAGTTA 58.568 43.478 0.00 0.00 45.57 2.24
2913 2953 5.221441 GCAGTGGTAAAAATGAAGGAAGGTT 60.221 40.000 0.00 0.00 0.00 3.50
2967 3007 5.324409 ACCAAGTGCATCTTAGAATTTCCA 58.676 37.500 0.00 0.00 34.66 3.53
3003 3043 2.781431 AATTGGTTCACCCCGCCCTC 62.781 60.000 0.00 0.00 34.29 4.30
3006 3046 1.480789 ATTAATTGGTTCACCCCGCC 58.519 50.000 0.00 0.00 34.29 6.13
3071 4674 4.141846 ACTCATTTGCAGTCCATCGATACT 60.142 41.667 0.00 0.00 0.00 2.12
3111 4714 1.857965 TCTCCACTGACCTCATCCTG 58.142 55.000 0.00 0.00 0.00 3.86
3158 4761 8.140112 AGGATTAAGAGACACTGTAACATTCT 57.860 34.615 0.00 0.00 0.00 2.40
3212 4815 7.343316 AGACTAGAAGTTAGTGATATTGCCAGT 59.657 37.037 0.00 0.00 0.00 4.00
3215 4818 7.717568 TCAGACTAGAAGTTAGTGATATTGCC 58.282 38.462 0.00 0.00 0.00 4.52
3229 4832 6.881602 AGGGCAATAAAAGTTCAGACTAGAAG 59.118 38.462 0.00 0.00 34.21 2.85
3239 4842 6.537660 ACGTGATACTAGGGCAATAAAAGTTC 59.462 38.462 0.00 0.00 0.00 3.01
3244 4847 7.350744 TCTTACGTGATACTAGGGCAATAAA 57.649 36.000 0.00 0.00 0.00 1.40
3260 4863 3.057736 CCTCCCGGTATGTATCTTACGTG 60.058 52.174 0.00 0.00 0.00 4.49
3261 4864 3.152341 CCTCCCGGTATGTATCTTACGT 58.848 50.000 0.00 0.00 0.00 3.57
3262 4865 3.415212 TCCTCCCGGTATGTATCTTACG 58.585 50.000 0.00 0.00 0.00 3.18
3263 4866 4.021632 GGTTCCTCCCGGTATGTATCTTAC 60.022 50.000 0.00 0.00 0.00 2.34
3264 4867 4.154942 GGTTCCTCCCGGTATGTATCTTA 58.845 47.826 0.00 0.00 0.00 2.10
3265 4868 2.970640 GGTTCCTCCCGGTATGTATCTT 59.029 50.000 0.00 0.00 0.00 2.40
3266 4869 2.606378 GGTTCCTCCCGGTATGTATCT 58.394 52.381 0.00 0.00 0.00 1.98
3280 4883 0.343372 TATGAGGAGGCTGGGTTCCT 59.657 55.000 0.00 0.00 46.35 3.36
3281 4884 0.761802 CTATGAGGAGGCTGGGTTCC 59.238 60.000 0.00 0.00 0.00 3.62
3282 4885 1.501582 ACTATGAGGAGGCTGGGTTC 58.498 55.000 0.00 0.00 0.00 3.62
3283 4886 1.972588 AACTATGAGGAGGCTGGGTT 58.027 50.000 0.00 0.00 0.00 4.11
3284 4887 1.972588 AAACTATGAGGAGGCTGGGT 58.027 50.000 0.00 0.00 0.00 4.51
3285 4888 2.224402 GCTAAACTATGAGGAGGCTGGG 60.224 54.545 0.00 0.00 0.00 4.45
3286 4889 2.546795 CGCTAAACTATGAGGAGGCTGG 60.547 54.545 0.00 0.00 0.00 4.85
3287 4890 2.748605 CGCTAAACTATGAGGAGGCTG 58.251 52.381 0.00 0.00 0.00 4.85
3288 4891 1.069358 GCGCTAAACTATGAGGAGGCT 59.931 52.381 0.00 0.00 0.00 4.58
3289 4892 1.069358 AGCGCTAAACTATGAGGAGGC 59.931 52.381 8.99 0.00 0.00 4.70
3290 4893 3.385577 GAAGCGCTAAACTATGAGGAGG 58.614 50.000 12.05 0.00 0.00 4.30
3291 4894 3.068873 AGGAAGCGCTAAACTATGAGGAG 59.931 47.826 12.05 0.00 0.00 3.69
3292 4895 3.031736 AGGAAGCGCTAAACTATGAGGA 58.968 45.455 12.05 0.00 0.00 3.71
3293 4896 3.126831 CAGGAAGCGCTAAACTATGAGG 58.873 50.000 12.05 0.00 0.00 3.86
3294 4897 3.126831 CCAGGAAGCGCTAAACTATGAG 58.873 50.000 12.05 0.00 0.00 2.90
3295 4898 2.741878 GCCAGGAAGCGCTAAACTATGA 60.742 50.000 12.05 0.00 0.00 2.15
3296 4899 1.599542 GCCAGGAAGCGCTAAACTATG 59.400 52.381 12.05 4.10 0.00 2.23
3297 4900 1.475213 GGCCAGGAAGCGCTAAACTAT 60.475 52.381 12.05 0.00 0.00 2.12
3298 4901 0.107848 GGCCAGGAAGCGCTAAACTA 60.108 55.000 12.05 0.00 0.00 2.24
3299 4902 1.377333 GGCCAGGAAGCGCTAAACT 60.377 57.895 12.05 6.46 0.00 2.66
3300 4903 2.750888 CGGCCAGGAAGCGCTAAAC 61.751 63.158 12.05 3.69 0.00 2.01
3301 4904 2.435938 CGGCCAGGAAGCGCTAAA 60.436 61.111 12.05 0.00 0.00 1.85
3302 4905 3.659089 GACGGCCAGGAAGCGCTAA 62.659 63.158 12.05 0.00 0.00 3.09
3303 4906 4.143333 GACGGCCAGGAAGCGCTA 62.143 66.667 12.05 0.00 0.00 4.26
3307 4910 4.162690 ATCCGACGGCCAGGAAGC 62.163 66.667 9.66 0.00 40.32 3.86
3308 4911 2.107141 GATCCGACGGCCAGGAAG 59.893 66.667 9.66 0.00 40.32 3.46
3309 4912 2.363795 AGATCCGACGGCCAGGAA 60.364 61.111 9.66 0.00 40.32 3.36
3310 4913 3.147595 CAGATCCGACGGCCAGGA 61.148 66.667 9.66 13.18 41.30 3.86
3311 4914 4.227134 CCAGATCCGACGGCCAGG 62.227 72.222 9.66 6.10 0.00 4.45
3312 4915 3.432051 GACCAGATCCGACGGCCAG 62.432 68.421 9.66 0.00 0.00 4.85
3313 4916 3.458163 GACCAGATCCGACGGCCA 61.458 66.667 9.66 0.00 0.00 5.36
3314 4917 4.222847 GGACCAGATCCGACGGCC 62.223 72.222 9.66 3.31 37.88 6.13
3322 4925 4.187694 GAGAACACATCAAGGACCAGATC 58.812 47.826 0.00 0.00 0.00 2.75
3323 4926 3.584406 TGAGAACACATCAAGGACCAGAT 59.416 43.478 0.00 0.00 0.00 2.90
3324 4927 2.972021 TGAGAACACATCAAGGACCAGA 59.028 45.455 0.00 0.00 0.00 3.86
3325 4928 3.407424 TGAGAACACATCAAGGACCAG 57.593 47.619 0.00 0.00 0.00 4.00
3326 4929 3.307691 GGATGAGAACACATCAAGGACCA 60.308 47.826 12.52 0.00 45.68 4.02
3327 4930 3.274288 GGATGAGAACACATCAAGGACC 58.726 50.000 12.52 0.00 45.68 4.46
3328 4931 2.932614 CGGATGAGAACACATCAAGGAC 59.067 50.000 12.52 0.00 45.68 3.85
3329 4932 2.677902 GCGGATGAGAACACATCAAGGA 60.678 50.000 12.52 0.00 45.68 3.36
3330 4933 1.667724 GCGGATGAGAACACATCAAGG 59.332 52.381 12.52 4.57 45.68 3.61
3331 4934 1.667724 GGCGGATGAGAACACATCAAG 59.332 52.381 12.52 7.97 45.68 3.02
3332 4935 1.278985 AGGCGGATGAGAACACATCAA 59.721 47.619 12.52 0.00 45.68 2.57
3333 4936 0.904649 AGGCGGATGAGAACACATCA 59.095 50.000 12.52 0.00 45.68 3.07
3334 4937 1.134699 TCAGGCGGATGAGAACACATC 60.135 52.381 0.00 0.00 43.88 3.06
3335 4938 0.904649 TCAGGCGGATGAGAACACAT 59.095 50.000 0.00 0.00 0.00 3.21
3336 4939 0.904649 ATCAGGCGGATGAGAACACA 59.095 50.000 0.00 0.00 34.06 3.72
3337 4940 1.134699 TGATCAGGCGGATGAGAACAC 60.135 52.381 4.45 0.00 36.00 3.32
3338 4941 1.134699 GTGATCAGGCGGATGAGAACA 60.135 52.381 4.45 0.00 36.00 3.18
3339 4942 1.576356 GTGATCAGGCGGATGAGAAC 58.424 55.000 4.45 0.00 36.00 3.01
3340 4943 0.103026 CGTGATCAGGCGGATGAGAA 59.897 55.000 4.45 0.00 36.00 2.87
3341 4944 0.751643 TCGTGATCAGGCGGATGAGA 60.752 55.000 10.58 0.00 36.00 3.27
3342 4945 0.318529 CTCGTGATCAGGCGGATGAG 60.319 60.000 10.58 2.06 36.00 2.90
3343 4946 0.751643 TCTCGTGATCAGGCGGATGA 60.752 55.000 10.58 0.00 36.00 2.92
3344 4947 0.316522 ATCTCGTGATCAGGCGGATG 59.683 55.000 10.58 0.00 36.00 3.51
3345 4948 0.316522 CATCTCGTGATCAGGCGGAT 59.683 55.000 10.58 12.57 39.53 4.18
3346 4949 0.751643 TCATCTCGTGATCAGGCGGA 60.752 55.000 10.58 10.99 0.00 5.54
3347 4950 0.318529 CTCATCTCGTGATCAGGCGG 60.319 60.000 10.58 6.26 35.97 6.13
3348 4951 0.938637 GCTCATCTCGTGATCAGGCG 60.939 60.000 10.58 4.76 35.97 5.52
3349 4952 0.103755 TGCTCATCTCGTGATCAGGC 59.896 55.000 10.58 5.08 35.97 4.85
3350 4953 1.680207 TCTGCTCATCTCGTGATCAGG 59.320 52.381 9.16 9.16 46.28 3.86
3352 4955 5.942826 ACTATATCTGCTCATCTCGTGATCA 59.057 40.000 0.00 0.00 35.97 2.92
3353 4956 6.435430 ACTATATCTGCTCATCTCGTGATC 57.565 41.667 0.00 0.00 35.97 2.92
3354 4957 5.356751 GGACTATATCTGCTCATCTCGTGAT 59.643 44.000 0.00 0.00 35.97 3.06
3355 4958 4.697828 GGACTATATCTGCTCATCTCGTGA 59.302 45.833 0.00 0.00 35.05 4.35
3356 4959 4.436718 CGGACTATATCTGCTCATCTCGTG 60.437 50.000 0.00 0.00 0.00 4.35
3357 4960 3.687212 CGGACTATATCTGCTCATCTCGT 59.313 47.826 0.00 0.00 0.00 4.18
3358 4961 3.687212 ACGGACTATATCTGCTCATCTCG 59.313 47.826 0.00 0.00 37.17 4.04
3359 4962 5.637006 AACGGACTATATCTGCTCATCTC 57.363 43.478 0.00 0.00 37.17 2.75
3360 4963 6.477253 TCTAACGGACTATATCTGCTCATCT 58.523 40.000 0.00 0.00 37.17 2.90
3361 4964 6.745159 TCTAACGGACTATATCTGCTCATC 57.255 41.667 0.00 0.00 37.17 2.92
3362 4965 6.037720 CGATCTAACGGACTATATCTGCTCAT 59.962 42.308 0.00 0.00 37.17 2.90
3363 4966 5.351740 CGATCTAACGGACTATATCTGCTCA 59.648 44.000 0.00 0.00 37.17 4.26
3364 4967 5.581479 TCGATCTAACGGACTATATCTGCTC 59.419 44.000 0.00 0.00 37.17 4.26
3365 4968 5.489249 TCGATCTAACGGACTATATCTGCT 58.511 41.667 0.00 0.00 37.17 4.24
3366 4969 5.220700 CCTCGATCTAACGGACTATATCTGC 60.221 48.000 0.00 0.00 37.17 4.26
3367 4970 5.220700 GCCTCGATCTAACGGACTATATCTG 60.221 48.000 0.00 0.00 39.92 2.90
3368 4971 4.877251 GCCTCGATCTAACGGACTATATCT 59.123 45.833 0.00 0.00 0.00 1.98
3369 4972 4.260294 CGCCTCGATCTAACGGACTATATC 60.260 50.000 0.00 0.00 0.00 1.63
3370 4973 3.622163 CGCCTCGATCTAACGGACTATAT 59.378 47.826 0.00 0.00 0.00 0.86
3371 4974 2.998670 CGCCTCGATCTAACGGACTATA 59.001 50.000 0.00 0.00 0.00 1.31
3372 4975 1.805345 CGCCTCGATCTAACGGACTAT 59.195 52.381 0.00 0.00 0.00 2.12
3373 4976 1.202568 TCGCCTCGATCTAACGGACTA 60.203 52.381 0.00 0.00 0.00 2.59
3374 4977 0.463295 TCGCCTCGATCTAACGGACT 60.463 55.000 0.00 0.00 0.00 3.85
3375 4978 0.041135 CTCGCCTCGATCTAACGGAC 60.041 60.000 0.00 0.00 34.61 4.79
3376 4979 0.463295 ACTCGCCTCGATCTAACGGA 60.463 55.000 0.00 0.00 34.61 4.69
3377 4980 0.041135 GACTCGCCTCGATCTAACGG 60.041 60.000 0.00 0.00 34.61 4.44
3378 4981 0.656259 TGACTCGCCTCGATCTAACG 59.344 55.000 0.00 0.00 34.61 3.18
3379 4982 1.671845 AGTGACTCGCCTCGATCTAAC 59.328 52.381 0.00 0.00 34.61 2.34
3380 4983 1.671328 CAGTGACTCGCCTCGATCTAA 59.329 52.381 0.00 0.00 34.61 2.10
3381 4984 1.300481 CAGTGACTCGCCTCGATCTA 58.700 55.000 0.00 0.00 34.61 1.98
3382 4985 0.678366 ACAGTGACTCGCCTCGATCT 60.678 55.000 0.00 0.00 34.61 2.75
3383 4986 1.003331 CTACAGTGACTCGCCTCGATC 60.003 57.143 0.00 0.00 34.61 3.69
3384 4987 1.018148 CTACAGTGACTCGCCTCGAT 58.982 55.000 0.00 0.00 34.61 3.59
3385 4988 0.036671 TCTACAGTGACTCGCCTCGA 60.037 55.000 0.00 0.00 0.00 4.04
3386 4989 1.003331 GATCTACAGTGACTCGCCTCG 60.003 57.143 0.00 0.00 0.00 4.63
3387 4990 1.003331 CGATCTACAGTGACTCGCCTC 60.003 57.143 0.00 0.00 0.00 4.70
3388 4991 1.018148 CGATCTACAGTGACTCGCCT 58.982 55.000 0.00 0.00 0.00 5.52
3389 4992 1.015109 TCGATCTACAGTGACTCGCC 58.985 55.000 0.00 0.00 0.00 5.54
3390 4993 2.826979 TTCGATCTACAGTGACTCGC 57.173 50.000 0.00 0.00 0.00 5.03
3391 4994 4.079665 TGTTTCGATCTACAGTGACTCG 57.920 45.455 0.00 0.00 0.00 4.18
3398 5001 6.201044 AGTTTTGACACTGTTTCGATCTACAG 59.799 38.462 16.66 16.66 45.61 2.74
3399 5002 6.046593 AGTTTTGACACTGTTTCGATCTACA 58.953 36.000 0.00 0.00 0.00 2.74
3400 5003 6.526566 AGTTTTGACACTGTTTCGATCTAC 57.473 37.500 0.00 0.00 0.00 2.59
3401 5004 6.074516 CGAAGTTTTGACACTGTTTCGATCTA 60.075 38.462 5.79 0.00 38.45 1.98
3402 5005 5.276868 CGAAGTTTTGACACTGTTTCGATCT 60.277 40.000 5.79 0.00 38.45 2.75
3403 5006 4.898488 CGAAGTTTTGACACTGTTTCGATC 59.102 41.667 5.79 0.00 38.45 3.69
3404 5007 4.331717 ACGAAGTTTTGACACTGTTTCGAT 59.668 37.500 15.07 1.68 37.78 3.59
3405 5008 3.680937 ACGAAGTTTTGACACTGTTTCGA 59.319 39.130 15.07 0.00 37.78 3.71
3406 5009 3.778718 CACGAAGTTTTGACACTGTTTCG 59.221 43.478 9.01 9.01 41.61 3.46
3407 5010 3.542310 GCACGAAGTTTTGACACTGTTTC 59.458 43.478 0.00 0.00 41.61 2.78
3408 5011 3.498082 GCACGAAGTTTTGACACTGTTT 58.502 40.909 0.00 0.00 41.61 2.83
3409 5012 2.159435 GGCACGAAGTTTTGACACTGTT 60.159 45.455 0.00 0.00 41.61 3.16
3410 5013 1.400494 GGCACGAAGTTTTGACACTGT 59.600 47.619 0.00 0.00 41.61 3.55
3411 5014 1.400142 TGGCACGAAGTTTTGACACTG 59.600 47.619 0.00 0.00 41.61 3.66
3412 5015 1.400494 GTGGCACGAAGTTTTGACACT 59.600 47.619 14.37 0.00 46.61 3.55
3413 5016 1.822581 GTGGCACGAAGTTTTGACAC 58.177 50.000 0.00 8.27 44.32 3.67
3414 5017 0.736053 GGTGGCACGAAGTTTTGACA 59.264 50.000 12.17 0.00 41.61 3.58
3415 5018 0.316689 CGGTGGCACGAAGTTTTGAC 60.317 55.000 12.17 0.00 41.61 3.18
3416 5019 2.018544 CGGTGGCACGAAGTTTTGA 58.981 52.632 12.17 0.00 41.61 2.69
3417 5020 1.657181 GCGGTGGCACGAAGTTTTG 60.657 57.895 12.17 0.00 41.61 2.44
3418 5021 1.381165 AAGCGGTGGCACGAAGTTTT 61.381 50.000 12.17 2.73 41.61 2.43
3419 5022 1.822186 AAGCGGTGGCACGAAGTTT 60.822 52.632 12.17 7.06 41.61 2.66
3420 5023 2.203153 AAGCGGTGGCACGAAGTT 60.203 55.556 12.17 0.64 41.61 2.66
3422 5025 1.225376 TTACAAGCGGTGGCACGAAG 61.225 55.000 12.17 6.78 43.41 3.79
3423 5026 0.604243 ATTACAAGCGGTGGCACGAA 60.604 50.000 12.17 0.00 43.41 3.85
3424 5027 0.604243 AATTACAAGCGGTGGCACGA 60.604 50.000 12.17 0.00 43.41 4.35
3425 5028 1.080298 TAATTACAAGCGGTGGCACG 58.920 50.000 12.17 8.28 43.41 5.34
3426 5029 2.680841 TGATAATTACAAGCGGTGGCAC 59.319 45.455 9.70 9.70 43.41 5.01
3427 5030 2.942376 CTGATAATTACAAGCGGTGGCA 59.058 45.455 0.00 0.00 43.41 4.92
3428 5031 3.202906 TCTGATAATTACAAGCGGTGGC 58.797 45.455 0.00 0.00 40.37 5.01
3429 5032 5.300752 AGATCTGATAATTACAAGCGGTGG 58.699 41.667 0.00 0.00 0.00 4.61
3430 5033 5.985530 TGAGATCTGATAATTACAAGCGGTG 59.014 40.000 0.00 0.00 0.00 4.94
3431 5034 5.986135 GTGAGATCTGATAATTACAAGCGGT 59.014 40.000 0.00 0.00 0.00 5.68
3432 5035 5.406780 GGTGAGATCTGATAATTACAAGCGG 59.593 44.000 0.00 0.00 0.00 5.52
3433 5036 5.117745 CGGTGAGATCTGATAATTACAAGCG 59.882 44.000 0.00 0.00 0.00 4.68
3434 5037 6.216569 TCGGTGAGATCTGATAATTACAAGC 58.783 40.000 0.00 0.00 0.00 4.01
3435 5038 6.865726 CCTCGGTGAGATCTGATAATTACAAG 59.134 42.308 0.00 0.00 0.00 3.16
3436 5039 6.239317 CCCTCGGTGAGATCTGATAATTACAA 60.239 42.308 0.00 0.00 0.00 2.41
3437 5040 5.243954 CCCTCGGTGAGATCTGATAATTACA 59.756 44.000 0.00 0.00 0.00 2.41
3438 5041 5.715070 CCCTCGGTGAGATCTGATAATTAC 58.285 45.833 0.00 0.00 0.00 1.89
3439 5042 4.220821 GCCCTCGGTGAGATCTGATAATTA 59.779 45.833 0.00 0.00 0.00 1.40
3440 5043 3.007398 GCCCTCGGTGAGATCTGATAATT 59.993 47.826 0.00 0.00 0.00 1.40
3441 5044 2.564947 GCCCTCGGTGAGATCTGATAAT 59.435 50.000 0.00 0.00 0.00 1.28
3442 5045 1.964223 GCCCTCGGTGAGATCTGATAA 59.036 52.381 0.00 0.00 0.00 1.75
3443 5046 1.133482 TGCCCTCGGTGAGATCTGATA 60.133 52.381 0.00 0.00 0.00 2.15
3444 5047 0.397675 TGCCCTCGGTGAGATCTGAT 60.398 55.000 0.00 0.00 0.00 2.90
3445 5048 0.614697 TTGCCCTCGGTGAGATCTGA 60.615 55.000 0.00 0.00 0.00 3.27
3446 5049 0.250234 TTTGCCCTCGGTGAGATCTG 59.750 55.000 0.00 0.00 0.00 2.90
3447 5050 0.539051 CTTTGCCCTCGGTGAGATCT 59.461 55.000 0.00 0.00 0.00 2.75
3448 5051 1.092345 GCTTTGCCCTCGGTGAGATC 61.092 60.000 0.00 0.00 0.00 2.75
3449 5052 1.078143 GCTTTGCCCTCGGTGAGAT 60.078 57.895 0.00 0.00 0.00 2.75
3450 5053 2.217038 AGCTTTGCCCTCGGTGAGA 61.217 57.895 0.00 0.00 0.00 3.27
3451 5054 2.037136 CAGCTTTGCCCTCGGTGAG 61.037 63.158 0.00 0.00 0.00 3.51
3452 5055 2.032528 CAGCTTTGCCCTCGGTGA 59.967 61.111 0.00 0.00 0.00 4.02
3453 5056 3.058160 CCAGCTTTGCCCTCGGTG 61.058 66.667 0.00 0.00 0.00 4.94
3454 5057 4.351054 CCCAGCTTTGCCCTCGGT 62.351 66.667 0.00 0.00 0.00 4.69
3455 5058 2.843912 AATCCCAGCTTTGCCCTCGG 62.844 60.000 0.00 0.00 0.00 4.63
3456 5059 0.967380 AAATCCCAGCTTTGCCCTCG 60.967 55.000 0.00 0.00 0.00 4.63
3457 5060 1.269958 AAAATCCCAGCTTTGCCCTC 58.730 50.000 0.00 0.00 0.00 4.30
3458 5061 1.625315 GAAAAATCCCAGCTTTGCCCT 59.375 47.619 0.00 0.00 0.00 5.19
3459 5062 1.347378 TGAAAAATCCCAGCTTTGCCC 59.653 47.619 0.00 0.00 0.00 5.36
3460 5063 2.837532 TGAAAAATCCCAGCTTTGCC 57.162 45.000 0.00 0.00 0.00 4.52
3461 5064 3.004862 CCATGAAAAATCCCAGCTTTGC 58.995 45.455 0.00 0.00 0.00 3.68
3462 5065 3.602483 CCCATGAAAAATCCCAGCTTTG 58.398 45.455 0.00 0.00 0.00 2.77
3463 5066 2.026915 GCCCATGAAAAATCCCAGCTTT 60.027 45.455 0.00 0.00 0.00 3.51
3464 5067 1.556451 GCCCATGAAAAATCCCAGCTT 59.444 47.619 0.00 0.00 0.00 3.74
3465 5068 1.197812 GCCCATGAAAAATCCCAGCT 58.802 50.000 0.00 0.00 0.00 4.24
3466 5069 0.178767 GGCCCATGAAAAATCCCAGC 59.821 55.000 0.00 0.00 0.00 4.85
3467 5070 0.832626 GGGCCCATGAAAAATCCCAG 59.167 55.000 19.95 0.00 34.01 4.45
3468 5071 0.975040 CGGGCCCATGAAAAATCCCA 60.975 55.000 24.92 0.00 33.43 4.37
3469 5072 1.822615 CGGGCCCATGAAAAATCCC 59.177 57.895 24.92 0.00 0.00 3.85
3470 5073 1.143838 GCGGGCCCATGAAAAATCC 59.856 57.895 24.92 0.00 0.00 3.01
3471 5074 1.226945 CGCGGGCCCATGAAAAATC 60.227 57.895 24.92 0.00 0.00 2.17
3472 5075 2.720134 CCGCGGGCCCATGAAAAAT 61.720 57.895 24.92 0.00 0.00 1.82
3473 5076 3.377759 CCGCGGGCCCATGAAAAA 61.378 61.111 24.92 0.00 0.00 1.94
3474 5077 3.870024 TTCCGCGGGCCCATGAAAA 62.870 57.895 27.83 5.54 0.00 2.29
3475 5078 3.870024 TTTCCGCGGGCCCATGAAA 62.870 57.895 27.83 22.32 0.00 2.69
3476 5079 4.352607 TTTCCGCGGGCCCATGAA 62.353 61.111 27.83 17.65 0.00 2.57
3483 5086 4.676586 CAACACGTTTCCGCGGGC 62.677 66.667 27.83 14.98 39.15 6.13
3484 5087 4.020378 CCAACACGTTTCCGCGGG 62.020 66.667 27.83 11.94 41.68 6.13
3485 5088 3.273834 ACCAACACGTTTCCGCGG 61.274 61.111 22.12 22.12 37.70 6.46
3486 5089 2.052590 CACCAACACGTTTCCGCG 60.053 61.111 0.00 0.00 37.70 6.46
3487 5090 2.330041 CCACCAACACGTTTCCGC 59.670 61.111 0.00 0.00 37.70 5.54
3488 5091 2.184167 AGCCACCAACACGTTTCCG 61.184 57.895 0.00 0.00 40.83 4.30
3489 5092 1.098712 TCAGCCACCAACACGTTTCC 61.099 55.000 0.00 0.00 0.00 3.13
3490 5093 0.951558 ATCAGCCACCAACACGTTTC 59.048 50.000 0.00 0.00 0.00 2.78
3491 5094 1.066908 CAATCAGCCACCAACACGTTT 59.933 47.619 0.00 0.00 0.00 3.60
3492 5095 0.667993 CAATCAGCCACCAACACGTT 59.332 50.000 0.00 0.00 0.00 3.99
3493 5096 1.172180 CCAATCAGCCACCAACACGT 61.172 55.000 0.00 0.00 0.00 4.49
3494 5097 1.580942 CCAATCAGCCACCAACACG 59.419 57.895 0.00 0.00 0.00 4.49
3495 5098 1.290009 GCCAATCAGCCACCAACAC 59.710 57.895 0.00 0.00 0.00 3.32
3496 5099 3.776158 GCCAATCAGCCACCAACA 58.224 55.556 0.00 0.00 0.00 3.33
3516 5119 4.933064 CTCGCCTCATCGACCCGC 62.933 72.222 0.00 0.00 34.46 6.13
3517 5120 4.271816 CCTCGCCTCATCGACCCG 62.272 72.222 0.00 0.00 34.46 5.28
3518 5121 3.917760 CCCTCGCCTCATCGACCC 61.918 72.222 0.00 0.00 34.46 4.46
3519 5122 3.917760 CCCCTCGCCTCATCGACC 61.918 72.222 0.00 0.00 34.46 4.79
3520 5123 3.917760 CCCCCTCGCCTCATCGAC 61.918 72.222 0.00 0.00 34.46 4.20
3521 5124 4.137615 TCCCCCTCGCCTCATCGA 62.138 66.667 0.00 0.00 36.94 3.59
3522 5125 3.610669 CTCCCCCTCGCCTCATCG 61.611 72.222 0.00 0.00 0.00 3.84
3523 5126 3.934962 GCTCCCCCTCGCCTCATC 61.935 72.222 0.00 0.00 0.00 2.92
3530 5133 3.447025 GATTGGTCGCTCCCCCTCG 62.447 68.421 0.00 0.00 34.77 4.63
3531 5134 2.506472 GATTGGTCGCTCCCCCTC 59.494 66.667 0.00 0.00 34.77 4.30
3532 5135 3.090532 GGATTGGTCGCTCCCCCT 61.091 66.667 0.00 0.00 34.77 4.79
3533 5136 4.191015 GGGATTGGTCGCTCCCCC 62.191 72.222 0.00 0.00 44.68 5.40
3536 5139 1.749258 GTTGGGGATTGGTCGCTCC 60.749 63.158 0.00 0.00 37.45 4.70
3537 5140 0.744771 GAGTTGGGGATTGGTCGCTC 60.745 60.000 0.00 0.00 37.45 5.03
3538 5141 1.299976 GAGTTGGGGATTGGTCGCT 59.700 57.895 0.00 0.00 37.45 4.93
3539 5142 2.106683 CGAGTTGGGGATTGGTCGC 61.107 63.158 0.00 0.00 36.63 5.19
3540 5143 0.739813 GTCGAGTTGGGGATTGGTCG 60.740 60.000 0.00 0.00 0.00 4.79
3541 5144 0.392595 GGTCGAGTTGGGGATTGGTC 60.393 60.000 0.00 0.00 0.00 4.02
3542 5145 0.840722 AGGTCGAGTTGGGGATTGGT 60.841 55.000 0.00 0.00 0.00 3.67
3543 5146 0.107654 GAGGTCGAGTTGGGGATTGG 60.108 60.000 0.00 0.00 0.00 3.16
3544 5147 0.107654 GGAGGTCGAGTTGGGGATTG 60.108 60.000 0.00 0.00 0.00 2.67
3545 5148 1.272554 GGGAGGTCGAGTTGGGGATT 61.273 60.000 0.00 0.00 0.00 3.01
3546 5149 1.689582 GGGAGGTCGAGTTGGGGAT 60.690 63.158 0.00 0.00 0.00 3.85
3547 5150 2.284405 GGGAGGTCGAGTTGGGGA 60.284 66.667 0.00 0.00 0.00 4.81
3548 5151 2.284699 AGGGAGGTCGAGTTGGGG 60.285 66.667 0.00 0.00 0.00 4.96
3549 5152 2.711922 CGAGGGAGGTCGAGTTGGG 61.712 68.421 0.00 0.00 42.85 4.12
3550 5153 1.677966 TCGAGGGAGGTCGAGTTGG 60.678 63.158 0.00 0.00 43.91 3.77
3551 5154 3.998156 TCGAGGGAGGTCGAGTTG 58.002 61.111 0.00 0.00 43.91 3.16
3556 5159 1.899534 GGGAGATCGAGGGAGGTCG 60.900 68.421 0.00 0.00 41.51 4.79
3557 5160 1.899534 CGGGAGATCGAGGGAGGTC 60.900 68.421 0.00 0.00 0.00 3.85
3558 5161 1.351080 TACGGGAGATCGAGGGAGGT 61.351 60.000 0.00 0.00 0.00 3.85
3559 5162 0.890090 GTACGGGAGATCGAGGGAGG 60.890 65.000 0.00 0.00 0.00 4.30
3560 5163 0.179026 TGTACGGGAGATCGAGGGAG 60.179 60.000 0.00 0.00 0.00 4.30
3561 5164 0.465097 GTGTACGGGAGATCGAGGGA 60.465 60.000 0.00 0.00 0.00 4.20
3562 5165 1.453762 GGTGTACGGGAGATCGAGGG 61.454 65.000 0.00 0.00 0.00 4.30
3563 5166 1.453762 GGGTGTACGGGAGATCGAGG 61.454 65.000 0.00 0.00 0.00 4.63
3564 5167 0.465824 AGGGTGTACGGGAGATCGAG 60.466 60.000 0.00 0.00 0.00 4.04
3565 5168 0.839277 TAGGGTGTACGGGAGATCGA 59.161 55.000 0.00 0.00 0.00 3.59
3566 5169 0.950116 GTAGGGTGTACGGGAGATCG 59.050 60.000 0.00 0.00 0.00 3.69
3567 5170 1.326328 GGTAGGGTGTACGGGAGATC 58.674 60.000 0.00 0.00 0.00 2.75
3568 5171 0.632835 TGGTAGGGTGTACGGGAGAT 59.367 55.000 0.00 0.00 0.00 2.75
3569 5172 0.632835 ATGGTAGGGTGTACGGGAGA 59.367 55.000 0.00 0.00 0.00 3.71
3570 5173 1.038280 GATGGTAGGGTGTACGGGAG 58.962 60.000 0.00 0.00 0.00 4.30
3571 5174 0.752743 CGATGGTAGGGTGTACGGGA 60.753 60.000 0.00 0.00 0.00 5.14
3572 5175 1.039233 ACGATGGTAGGGTGTACGGG 61.039 60.000 0.00 0.00 0.00 5.28
3573 5176 0.101759 CACGATGGTAGGGTGTACGG 59.898 60.000 0.00 0.00 0.00 4.02
3574 5177 0.101759 CCACGATGGTAGGGTGTACG 59.898 60.000 0.00 0.00 31.35 3.67
3575 5178 0.462789 CCCACGATGGTAGGGTGTAC 59.537 60.000 7.06 0.00 37.81 2.90
3576 5179 0.335705 TCCCACGATGGTAGGGTGTA 59.664 55.000 12.68 0.00 43.31 2.90
3577 5180 1.079621 TCCCACGATGGTAGGGTGT 59.920 57.895 12.68 0.00 43.31 4.16
3578 5181 1.520666 GTCCCACGATGGTAGGGTG 59.479 63.158 12.68 0.00 43.31 4.61
3579 5182 2.056223 CGTCCCACGATGGTAGGGT 61.056 63.158 12.68 0.00 46.05 4.34
3580 5183 2.812499 CGTCCCACGATGGTAGGG 59.188 66.667 8.45 8.45 46.05 3.53
3581 5184 2.106332 GCGTCCCACGATGGTAGG 59.894 66.667 0.00 0.00 46.05 3.18
3582 5185 1.226974 CTGCGTCCCACGATGGTAG 60.227 63.158 0.00 0.00 46.05 3.18
3583 5186 2.889617 CTGCGTCCCACGATGGTA 59.110 61.111 0.00 0.00 46.05 3.25
3584 5187 4.760047 GCTGCGTCCCACGATGGT 62.760 66.667 0.00 0.00 46.05 3.55
3585 5188 4.457496 AGCTGCGTCCCACGATGG 62.457 66.667 0.00 0.00 46.05 3.51
3586 5189 2.887568 GAGCTGCGTCCCACGATG 60.888 66.667 0.00 0.00 46.05 3.84
3587 5190 4.148825 GGAGCTGCGTCCCACGAT 62.149 66.667 0.00 0.00 46.05 3.73
3589 5192 4.803426 GAGGAGCTGCGTCCCACG 62.803 72.222 12.53 0.00 45.88 4.94
3590 5193 3.386237 AGAGGAGCTGCGTCCCAC 61.386 66.667 12.53 6.38 37.31 4.61
3591 5194 3.385384 CAGAGGAGCTGCGTCCCA 61.385 66.667 12.53 0.00 37.90 4.37
3592 5195 3.071206 TCAGAGGAGCTGCGTCCC 61.071 66.667 12.53 7.40 44.52 4.46
3593 5196 2.183046 GTCAGAGGAGCTGCGTCC 59.817 66.667 0.00 9.30 44.52 4.79
3594 5197 1.645704 TACGTCAGAGGAGCTGCGTC 61.646 60.000 14.59 0.00 46.59 5.19
3595 5198 2.986413 ACGTCAGAGGAGCTGCGT 60.986 61.111 0.00 0.00 45.57 5.24
3596 5199 1.226435 GTACGTCAGAGGAGCTGCG 60.226 63.158 0.00 0.00 44.52 5.18
3597 5200 1.226435 CGTACGTCAGAGGAGCTGC 60.226 63.158 7.22 0.00 44.52 5.25
3598 5201 1.429825 CCGTACGTCAGAGGAGCTG 59.570 63.158 15.21 0.00 46.31 4.24
3599 5202 2.408241 GCCGTACGTCAGAGGAGCT 61.408 63.158 15.21 0.00 0.00 4.09
3600 5203 2.102553 GCCGTACGTCAGAGGAGC 59.897 66.667 15.21 3.74 0.00 4.70
3601 5204 2.403987 CGCCGTACGTCAGAGGAG 59.596 66.667 15.21 0.00 36.87 3.69
3602 5205 3.807538 GCGCCGTACGTCAGAGGA 61.808 66.667 15.21 0.00 46.11 3.71
3603 5206 4.111016 TGCGCCGTACGTCAGAGG 62.111 66.667 15.21 0.00 46.11 3.69
3604 5207 2.874780 GTGCGCCGTACGTCAGAG 60.875 66.667 15.21 1.85 46.11 3.35
3605 5208 3.318539 GAGTGCGCCGTACGTCAGA 62.319 63.158 15.21 0.00 46.11 3.27
3606 5209 2.874780 GAGTGCGCCGTACGTCAG 60.875 66.667 15.21 6.03 46.11 3.51
3607 5210 4.746951 CGAGTGCGCCGTACGTCA 62.747 66.667 15.21 6.28 46.11 4.35
3620 5223 2.335369 GTCCACACGTCAGCGAGT 59.665 61.111 0.00 0.00 42.28 4.18
3621 5224 2.430921 GGTCCACACGTCAGCGAG 60.431 66.667 0.00 0.00 42.00 5.03
3622 5225 3.986006 GGGTCCACACGTCAGCGA 61.986 66.667 0.00 0.00 42.00 4.93
3625 5228 3.299977 TCCGGGTCCACACGTCAG 61.300 66.667 0.00 0.00 42.08 3.51
3626 5229 3.608662 GTCCGGGTCCACACGTCA 61.609 66.667 0.00 0.00 42.08 4.35
3627 5230 4.368543 GGTCCGGGTCCACACGTC 62.369 72.222 0.00 0.00 42.08 4.34
3649 5252 3.041940 GACGTTGGGCCACTGACG 61.042 66.667 23.66 23.66 41.00 4.35
3650 5253 1.961277 CTGACGTTGGGCCACTGAC 60.961 63.158 5.23 0.00 0.00 3.51
3651 5254 2.425592 CTGACGTTGGGCCACTGA 59.574 61.111 5.23 0.00 0.00 3.41
3652 5255 2.669569 CCTGACGTTGGGCCACTG 60.670 66.667 5.23 3.70 0.00 3.66
3653 5256 3.168528 ACCTGACGTTGGGCCACT 61.169 61.111 5.23 0.00 0.00 4.00
3654 5257 2.978010 CACCTGACGTTGGGCCAC 60.978 66.667 5.23 0.00 0.00 5.01
3655 5258 4.263572 CCACCTGACGTTGGGCCA 62.264 66.667 0.00 0.00 0.00 5.36
3659 5262 3.229156 TACGGCCACCTGACGTTGG 62.229 63.158 2.24 6.95 41.53 3.77
3660 5263 2.025418 GTACGGCCACCTGACGTTG 61.025 63.158 2.24 0.00 41.53 4.10
3661 5264 2.341176 GTACGGCCACCTGACGTT 59.659 61.111 2.24 0.00 41.53 3.99
3662 5265 4.047059 CGTACGGCCACCTGACGT 62.047 66.667 7.57 0.00 43.88 4.34
3663 5266 3.958822 GACGTACGGCCACCTGACG 62.959 68.421 21.06 6.95 36.05 4.35
3664 5267 2.126189 GACGTACGGCCACCTGAC 60.126 66.667 21.06 0.00 0.00 3.51
3665 5268 2.598099 TGACGTACGGCCACCTGA 60.598 61.111 20.48 0.00 0.00 3.86
3666 5269 2.126071 CTGACGTACGGCCACCTG 60.126 66.667 20.48 0.00 0.00 4.00
3667 5270 3.379445 CCTGACGTACGGCCACCT 61.379 66.667 20.48 0.00 0.00 4.00
3668 5271 4.446413 CCCTGACGTACGGCCACC 62.446 72.222 20.48 2.90 0.00 4.61
3669 5272 4.446413 CCCCTGACGTACGGCCAC 62.446 72.222 20.48 7.80 0.00 5.01
3670 5273 3.968837 ATCCCCTGACGTACGGCCA 62.969 63.158 20.48 14.99 0.00 5.36
3671 5274 3.148031 GATCCCCTGACGTACGGCC 62.148 68.421 20.48 10.81 0.00 6.13
3672 5275 2.351336 CTGATCCCCTGACGTACGGC 62.351 65.000 21.06 18.72 0.00 5.68
3673 5276 1.734137 CTGATCCCCTGACGTACGG 59.266 63.158 21.06 1.19 0.00 4.02
3674 5277 0.750546 TCCTGATCCCCTGACGTACG 60.751 60.000 15.01 15.01 0.00 3.67
3675 5278 1.614413 GATCCTGATCCCCTGACGTAC 59.386 57.143 0.00 0.00 31.76 3.67
3676 5279 1.996798 GATCCTGATCCCCTGACGTA 58.003 55.000 0.00 0.00 31.76 3.57
3677 5280 2.827715 GATCCTGATCCCCTGACGT 58.172 57.895 0.00 0.00 31.76 4.34
3686 5289 1.875576 GCACGATGGTGGATCCTGATC 60.876 57.143 14.23 10.23 44.54 2.92
3687 5290 0.107456 GCACGATGGTGGATCCTGAT 59.893 55.000 14.23 1.71 44.54 2.90
3688 5291 1.522092 GCACGATGGTGGATCCTGA 59.478 57.895 14.23 0.00 44.54 3.86
3689 5292 1.524621 GGCACGATGGTGGATCCTG 60.525 63.158 14.23 1.62 44.54 3.86
3690 5293 2.911143 GGCACGATGGTGGATCCT 59.089 61.111 14.23 0.00 44.54 3.24
3739 5342 4.436998 CAGCGTGAGGTCCGGGAC 62.437 72.222 19.06 19.06 41.81 4.46
3775 5378 3.470888 AAGGGGAGGTCATCGGCG 61.471 66.667 0.00 0.00 0.00 6.46
3776 5379 2.190578 CAAGGGGAGGTCATCGGC 59.809 66.667 0.00 0.00 0.00 5.54
3777 5380 2.190578 GCAAGGGGAGGTCATCGG 59.809 66.667 0.00 0.00 0.00 4.18
3778 5381 1.144936 GAGCAAGGGGAGGTCATCG 59.855 63.158 0.00 0.00 33.87 3.84
3779 5382 1.529309 GGAGCAAGGGGAGGTCATC 59.471 63.158 0.00 0.00 35.30 2.92
3780 5383 2.370445 CGGAGCAAGGGGAGGTCAT 61.370 63.158 0.00 0.00 35.30 3.06
3781 5384 3.003173 CGGAGCAAGGGGAGGTCA 61.003 66.667 0.00 0.00 35.30 4.02
3794 5397 0.174617 GACAGGAAGAAGAGGCGGAG 59.825 60.000 0.00 0.00 0.00 4.63
3795 5398 1.258445 GGACAGGAAGAAGAGGCGGA 61.258 60.000 0.00 0.00 0.00 5.54
3796 5399 1.219393 GGACAGGAAGAAGAGGCGG 59.781 63.158 0.00 0.00 0.00 6.13
3797 5400 1.153745 CGGACAGGAAGAAGAGGCG 60.154 63.158 0.00 0.00 0.00 5.52
3798 5401 1.219393 CCGGACAGGAAGAAGAGGC 59.781 63.158 0.00 0.00 45.00 4.70
3799 5402 1.219393 GCCGGACAGGAAGAAGAGG 59.781 63.158 5.05 0.00 45.00 3.69
3800 5403 1.407258 CTAGCCGGACAGGAAGAAGAG 59.593 57.143 5.05 0.00 45.00 2.85
3801 5404 1.005569 TCTAGCCGGACAGGAAGAAGA 59.994 52.381 5.05 0.00 45.00 2.87
3802 5405 1.475403 TCTAGCCGGACAGGAAGAAG 58.525 55.000 5.05 0.00 45.00 2.85
3803 5406 1.549170 GTTCTAGCCGGACAGGAAGAA 59.451 52.381 5.05 0.83 45.00 2.52
3804 5407 1.183549 GTTCTAGCCGGACAGGAAGA 58.816 55.000 5.05 0.00 45.00 2.87
3805 5408 0.175989 GGTTCTAGCCGGACAGGAAG 59.824 60.000 5.05 0.00 45.00 3.46
3806 5409 0.543410 TGGTTCTAGCCGGACAGGAA 60.543 55.000 5.05 0.00 45.00 3.36
3807 5410 1.077805 TGGTTCTAGCCGGACAGGA 59.922 57.895 5.05 0.00 45.00 3.86
3808 5411 1.218316 GTGGTTCTAGCCGGACAGG 59.782 63.158 5.05 0.00 44.97 4.00
3809 5412 1.153823 CGTGGTTCTAGCCGGACAG 60.154 63.158 5.05 0.00 0.00 3.51
3810 5413 2.642254 CCGTGGTTCTAGCCGGACA 61.642 63.158 5.05 0.00 43.01 4.02
3811 5414 2.183555 CCGTGGTTCTAGCCGGAC 59.816 66.667 5.05 0.00 43.01 4.79
3812 5415 3.766691 GCCGTGGTTCTAGCCGGA 61.767 66.667 5.05 0.00 43.01 5.14
3815 5418 4.752879 TGCGCCGTGGTTCTAGCC 62.753 66.667 4.18 0.00 0.00 3.93
3816 5419 3.488090 GTGCGCCGTGGTTCTAGC 61.488 66.667 4.18 0.00 0.00 3.42
3817 5420 3.179265 CGTGCGCCGTGGTTCTAG 61.179 66.667 4.18 0.00 0.00 2.43
3818 5421 4.728102 CCGTGCGCCGTGGTTCTA 62.728 66.667 4.18 0.00 33.66 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.