Multiple sequence alignment - TraesCS5A01G333500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G333500 chr5A 100.000 4311 0 0 1 4311 542062106 542066416 0.000000e+00 7962.0
1 TraesCS5A01G333500 chr5A 90.177 1130 101 6 2933 4060 599725134 599724013 0.000000e+00 1463.0
2 TraesCS5A01G333500 chr5A 87.166 561 58 10 809 1369 643297640 643298186 3.660000e-175 625.0
3 TraesCS5A01G333500 chr5A 97.571 247 6 0 4065 4311 80649807 80650053 1.430000e-114 424.0
4 TraesCS5A01G333500 chr5A 78.669 511 70 22 998 1502 543568013 543568490 1.950000e-78 303.0
5 TraesCS5A01G333500 chr5A 90.000 140 12 2 1699 1838 696840437 696840574 3.430000e-41 180.0
6 TraesCS5A01G333500 chr5A 90.000 140 12 2 1699 1838 696879526 696879663 3.430000e-41 180.0
7 TraesCS5A01G333500 chr5A 74.505 455 85 22 999 1445 541946096 541946527 7.410000e-38 169.0
8 TraesCS5A01G333500 chr5A 81.553 103 13 3 1385 1487 540884901 540884997 3.570000e-11 80.5
9 TraesCS5A01G333500 chr5A 97.368 38 1 0 818 855 541945937 541945974 1.000000e-06 65.8
10 TraesCS5A01G333500 chr4A 93.339 1141 74 2 2925 4064 14722971 14721832 0.000000e+00 1685.0
11 TraesCS5A01G333500 chr4A 92.260 1137 81 6 2933 4064 14756600 14755466 0.000000e+00 1605.0
12 TraesCS5A01G333500 chr4A 91.580 1152 80 12 2925 4064 658187708 658186562 0.000000e+00 1574.0
13 TraesCS5A01G333500 chr7D 92.388 1143 80 7 2925 4064 45195348 45196486 0.000000e+00 1622.0
14 TraesCS5A01G333500 chr4D 91.877 1108 79 6 2957 4063 496330140 496331237 0.000000e+00 1537.0
15 TraesCS5A01G333500 chr6B 89.782 1145 97 11 2925 4064 5516588 5517717 0.000000e+00 1448.0
16 TraesCS5A01G333500 chr6B 91.538 130 11 0 1696 1825 40715856 40715985 3.430000e-41 180.0
17 TraesCS5A01G333500 chr6B 86.624 157 14 5 1693 1845 679323990 679324143 2.670000e-37 167.0
18 TraesCS5A01G333500 chr3D 89.667 1142 108 5 2924 4064 29803598 29804730 0.000000e+00 1447.0
19 TraesCS5A01G333500 chr5D 88.976 1143 112 7 2925 4061 533525006 533526140 0.000000e+00 1400.0
20 TraesCS5A01G333500 chr5D 93.936 841 27 12 1956 2776 427583005 427583841 0.000000e+00 1249.0
21 TraesCS5A01G333500 chr5D 88.992 645 53 6 611 1249 427568654 427569286 0.000000e+00 782.0
22 TraesCS5A01G333500 chr5D 89.263 624 53 8 1 613 427567319 427567939 0.000000e+00 769.0
23 TraesCS5A01G333500 chr5D 87.257 565 58 10 809 1373 337683501 337684051 2.190000e-177 632.0
24 TraesCS5A01G333500 chr5D 79.452 511 66 23 998 1502 428238450 428238927 4.160000e-85 326.0
25 TraesCS5A01G333500 chr5D 93.333 180 8 2 1501 1680 427582573 427582748 3.310000e-66 263.0
26 TraesCS5A01G333500 chr5D 93.662 142 9 0 1824 1965 427582775 427582916 3.380000e-51 213.0
27 TraesCS5A01G333500 chr5D 93.519 108 7 0 2774 2881 243448323 243448216 1.240000e-35 161.0
28 TraesCS5A01G333500 chr5D 91.453 117 8 2 2774 2889 334292774 334292659 4.460000e-35 159.0
29 TraesCS5A01G333500 chr5D 97.778 45 0 1 2878 2921 427583838 427583882 4.620000e-10 76.8
30 TraesCS5A01G333500 chr5B 85.728 1030 87 34 685 1677 517215469 517216475 0.000000e+00 1033.0
31 TraesCS5A01G333500 chr5B 85.280 625 69 15 1 607 517213751 517214370 1.320000e-174 623.0
32 TraesCS5A01G333500 chr5B 94.444 324 15 1 1824 2147 517216488 517216808 2.990000e-136 496.0
33 TraesCS5A01G333500 chr5B 78.474 511 71 25 998 1502 517417815 517418292 9.060000e-77 298.0
34 TraesCS5A01G333500 chr5B 93.919 148 7 2 2218 2365 517216845 517216990 5.610000e-54 222.0
35 TraesCS5A01G333500 chr5B 89.510 143 11 3 2354 2494 517217499 517217639 1.230000e-40 178.0
36 TraesCS5A01G333500 chr5B 86.792 159 18 3 1699 1856 411518927 411518771 1.590000e-39 174.0
37 TraesCS5A01G333500 chr5B 73.581 458 87 24 999 1445 517203812 517204246 1.250000e-30 145.0
38 TraesCS5A01G333500 chr5B 97.826 46 1 0 2878 2923 517219687 517219732 3.570000e-11 80.5
39 TraesCS5A01G333500 chr2B 87.279 566 57 11 809 1373 408096515 408097066 2.190000e-177 632.0
40 TraesCS5A01G333500 chr3A 97.581 248 6 0 4064 4311 468842809 468842562 3.980000e-115 425.0
41 TraesCS5A01G333500 chr3A 97.571 247 6 0 4065 4311 599916966 599916720 1.430000e-114 424.0
42 TraesCS5A01G333500 chr3A 97.551 245 6 0 4067 4311 350655078 350654834 1.850000e-113 420.0
43 TraesCS5A01G333500 chr3A 89.286 140 12 3 1699 1836 16864046 16864184 5.730000e-39 172.0
44 TraesCS5A01G333500 chr2A 97.581 248 6 0 4064 4311 686231923 686232170 3.980000e-115 425.0
45 TraesCS5A01G333500 chr7A 97.166 247 7 0 4065 4311 699372175 699371929 6.670000e-113 418.0
46 TraesCS5A01G333500 chr7A 96.414 251 9 0 4061 4311 98646874 98646624 8.630000e-112 414.0
47 TraesCS5A01G333500 chr7A 89.130 138 15 0 1699 1836 663538322 663538185 5.730000e-39 172.0
48 TraesCS5A01G333500 chr6A 97.166 247 7 0 4065 4311 293508846 293509092 6.670000e-113 418.0
49 TraesCS5A01G333500 chr6D 96.400 250 9 0 4061 4310 446689616 446689367 3.100000e-111 412.0
50 TraesCS5A01G333500 chr3B 91.538 130 11 0 1696 1825 825378899 825379028 3.430000e-41 180.0
51 TraesCS5A01G333500 chrUn 89.855 138 12 2 1693 1829 16890319 16890455 4.430000e-40 176.0
52 TraesCS5A01G333500 chr2D 94.495 109 6 0 2772 2880 503307782 503307890 7.410000e-38 169.0
53 TraesCS5A01G333500 chr1D 94.444 108 5 1 2774 2881 367422256 367422150 9.590000e-37 165.0
54 TraesCS5A01G333500 chr1B 94.393 107 6 0 2774 2880 283119070 283119176 9.590000e-37 165.0
55 TraesCS5A01G333500 chr7B 93.578 109 7 0 2772 2880 78694852 78694960 3.450000e-36 163.0
56 TraesCS5A01G333500 chr7B 93.519 108 7 0 2773 2880 733752313 733752206 1.240000e-35 161.0
57 TraesCS5A01G333500 chr4B 92.793 111 8 0 2770 2880 392046929 392046819 1.240000e-35 161.0
58 TraesCS5A01G333500 chr1A 90.323 124 10 2 2760 2881 58193201 58193324 1.240000e-35 161.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G333500 chr5A 542062106 542066416 4310 False 7962.00 7962 100.000000 1 4311 1 chr5A.!!$F3 4310
1 TraesCS5A01G333500 chr5A 599724013 599725134 1121 True 1463.00 1463 90.177000 2933 4060 1 chr5A.!!$R1 1127
2 TraesCS5A01G333500 chr5A 643297640 643298186 546 False 625.00 625 87.166000 809 1369 1 chr5A.!!$F5 560
3 TraesCS5A01G333500 chr4A 14721832 14722971 1139 True 1685.00 1685 93.339000 2925 4064 1 chr4A.!!$R1 1139
4 TraesCS5A01G333500 chr4A 14755466 14756600 1134 True 1605.00 1605 92.260000 2933 4064 1 chr4A.!!$R2 1131
5 TraesCS5A01G333500 chr4A 658186562 658187708 1146 True 1574.00 1574 91.580000 2925 4064 1 chr4A.!!$R3 1139
6 TraesCS5A01G333500 chr7D 45195348 45196486 1138 False 1622.00 1622 92.388000 2925 4064 1 chr7D.!!$F1 1139
7 TraesCS5A01G333500 chr4D 496330140 496331237 1097 False 1537.00 1537 91.877000 2957 4063 1 chr4D.!!$F1 1106
8 TraesCS5A01G333500 chr6B 5516588 5517717 1129 False 1448.00 1448 89.782000 2925 4064 1 chr6B.!!$F1 1139
9 TraesCS5A01G333500 chr3D 29803598 29804730 1132 False 1447.00 1447 89.667000 2924 4064 1 chr3D.!!$F1 1140
10 TraesCS5A01G333500 chr5D 533525006 533526140 1134 False 1400.00 1400 88.976000 2925 4061 1 chr5D.!!$F3 1136
11 TraesCS5A01G333500 chr5D 427567319 427569286 1967 False 775.50 782 89.127500 1 1249 2 chr5D.!!$F4 1248
12 TraesCS5A01G333500 chr5D 337683501 337684051 550 False 632.00 632 87.257000 809 1373 1 chr5D.!!$F1 564
13 TraesCS5A01G333500 chr5D 427582573 427583882 1309 False 450.45 1249 94.677250 1501 2921 4 chr5D.!!$F5 1420
14 TraesCS5A01G333500 chr5B 517213751 517219732 5981 False 438.75 1033 91.117833 1 2923 6 chr5B.!!$F3 2922
15 TraesCS5A01G333500 chr2B 408096515 408097066 551 False 632.00 632 87.279000 809 1373 1 chr2B.!!$F1 564

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
393 411 0.879839 TGCATGTGTGTGTCACTCCG 60.880 55.0 4.27 0.00 46.27 4.63 F
1252 2351 0.179018 GGAGACAGTGCCCTTGTTGT 60.179 55.0 0.00 0.00 0.00 3.32 F
1821 2974 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.0 13.64 4.95 46.06 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1802 2955 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.0 5.23 0.0 44.66 2.12 R
2873 6432 0.099791 GCCTCTCTGCACGTACTCTC 59.900 60.0 0.00 0.0 0.00 3.20 R
3324 6891 0.341258 AGCAGGATCAGGGAGGAAGA 59.659 55.0 0.00 0.0 0.00 2.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
122 129 6.849085 TTGCCCAAAAATAGCTTCTCAATA 57.151 33.333 0.00 0.00 0.00 1.90
192 199 3.914426 GAGACCTAATTCTCTTGGCCA 57.086 47.619 0.00 0.00 39.26 5.36
193 200 3.536570 GAGACCTAATTCTCTTGGCCAC 58.463 50.000 3.88 0.00 39.26 5.01
217 224 1.616628 CCCAGGCCCCTACTCTTGT 60.617 63.158 0.00 0.00 0.00 3.16
253 265 1.530655 CCCAGGAAAACGTTGGCCT 60.531 57.895 14.55 14.55 0.00 5.19
323 337 1.660560 GCGAATGCTGAGGTGCCAAT 61.661 55.000 0.00 0.00 38.39 3.16
325 339 1.203052 CGAATGCTGAGGTGCCAATTT 59.797 47.619 0.00 0.00 0.00 1.82
377 394 7.840342 AAACAAACAAATTACAATGAGTGCA 57.160 28.000 0.00 0.00 0.00 4.57
393 411 0.879839 TGCATGTGTGTGTCACTCCG 60.880 55.000 4.27 0.00 46.27 4.63
399 417 1.107945 TGTGTGTCACTCCGTGAGAA 58.892 50.000 4.27 0.00 43.57 2.87
405 423 3.372822 GTGTCACTCCGTGAGAAAAACAA 59.627 43.478 7.76 0.00 43.57 2.83
410 428 1.679153 TCCGTGAGAAAAACAAAGGGC 59.321 47.619 0.00 0.00 0.00 5.19
421 439 3.595190 AACAAAGGGCCTAGTGTCTTT 57.405 42.857 19.84 0.00 0.00 2.52
422 440 3.595190 ACAAAGGGCCTAGTGTCTTTT 57.405 42.857 6.41 0.00 0.00 2.27
491 511 2.519013 GAAGATCCATATGCCCAACCC 58.481 52.381 0.00 0.00 0.00 4.11
500 520 1.488390 ATGCCCAACCCAATCATCAC 58.512 50.000 0.00 0.00 0.00 3.06
520 540 1.300156 CATCATCGATCACCGCCGT 60.300 57.895 0.00 0.00 38.37 5.68
528 548 3.680620 ATCACCGCCGTCACCATGG 62.681 63.158 11.19 11.19 0.00 3.66
567 588 4.994756 GCAACCCCCACACCCAGG 62.995 72.222 0.00 0.00 0.00 4.45
571 592 3.650950 CCCCCACACCCAGGTCTG 61.651 72.222 0.00 0.00 0.00 3.51
572 593 2.529136 CCCCACACCCAGGTCTGA 60.529 66.667 0.00 0.00 0.00 3.27
594 615 4.851639 AAGACCTCCATTTGCAGAGTAT 57.148 40.909 0.61 0.00 0.00 2.12
706 1795 1.147376 CGTCCAAGTCCACCCAACA 59.853 57.895 0.00 0.00 0.00 3.33
770 1859 1.000731 CAAACCTTACGACCCCACGTA 59.999 52.381 0.00 0.00 44.72 3.57
873 1962 2.819608 CACACATCCATCCCGTTTCTTT 59.180 45.455 0.00 0.00 0.00 2.52
940 2031 5.340360 CCCTTCCATTTCAATCCTACTCCTT 60.340 44.000 0.00 0.00 0.00 3.36
1015 2108 1.134580 CATCCATGTCGTCTCTTGCCT 60.135 52.381 0.00 0.00 0.00 4.75
1105 2204 1.220477 GACCTTCTCCTGCAGCTCC 59.780 63.158 8.66 0.00 0.00 4.70
1109 2208 2.590391 CTTCTCCTGCAGCTCCGCAT 62.590 60.000 8.66 0.00 42.06 4.73
1153 2252 1.229082 TCTACGGCCACAACCTCCT 60.229 57.895 2.24 0.00 0.00 3.69
1154 2253 1.218316 CTACGGCCACAACCTCCTC 59.782 63.158 2.24 0.00 0.00 3.71
1155 2254 2.240162 CTACGGCCACAACCTCCTCC 62.240 65.000 2.24 0.00 0.00 4.30
1156 2255 2.741878 TACGGCCACAACCTCCTCCT 62.742 60.000 2.24 0.00 0.00 3.69
1157 2256 2.671682 GGCCACAACCTCCTCCTC 59.328 66.667 0.00 0.00 0.00 3.71
1158 2257 1.920835 GGCCACAACCTCCTCCTCT 60.921 63.158 0.00 0.00 0.00 3.69
1165 2264 1.215679 AACCTCCTCCTCTCCCTCGA 61.216 60.000 0.00 0.00 0.00 4.04
1166 2265 1.150536 CCTCCTCCTCTCCCTCGAG 59.849 68.421 5.13 5.13 37.48 4.04
1206 2305 3.692406 GAGGACCTCGCCGTGGTT 61.692 66.667 12.62 0.00 38.03 3.67
1207 2306 3.934391 GAGGACCTCGCCGTGGTTG 62.934 68.421 12.62 0.00 38.03 3.77
1208 2307 4.309950 GGACCTCGCCGTGGTTGT 62.310 66.667 12.62 0.00 38.03 3.32
1209 2308 2.280592 GACCTCGCCGTGGTTGTT 60.281 61.111 12.62 0.00 38.03 2.83
1219 2318 2.833794 CCGTGGTTGTTGAAGAGAAGA 58.166 47.619 0.00 0.00 0.00 2.87
1222 2321 3.248602 CGTGGTTGTTGAAGAGAAGAAGG 59.751 47.826 0.00 0.00 0.00 3.46
1250 2349 0.398318 GAGGAGACAGTGCCCTTGTT 59.602 55.000 0.00 0.00 0.00 2.83
1252 2351 0.179018 GGAGACAGTGCCCTTGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
1255 2354 0.249031 GACAGTGCCCTTGTTGTTGC 60.249 55.000 0.00 0.00 0.00 4.17
1260 2359 2.637025 CCCTTGTTGTTGCGGTCG 59.363 61.111 0.00 0.00 0.00 4.79
1261 2360 2.051345 CCTTGTTGTTGCGGTCGC 60.051 61.111 8.54 8.54 42.35 5.19
1262 2361 2.542907 CCTTGTTGTTGCGGTCGCT 61.543 57.895 16.36 0.00 42.51 4.93
1263 2362 1.369209 CTTGTTGTTGCGGTCGCTG 60.369 57.895 16.36 0.00 42.51 5.18
1264 2363 2.715864 CTTGTTGTTGCGGTCGCTGG 62.716 60.000 16.36 0.00 42.51 4.85
1265 2364 2.970324 GTTGTTGCGGTCGCTGGA 60.970 61.111 16.36 0.23 42.51 3.86
1266 2365 2.970324 TTGTTGCGGTCGCTGGAC 60.970 61.111 16.36 12.08 42.51 4.02
1267 2366 3.741830 TTGTTGCGGTCGCTGGACA 62.742 57.895 16.36 14.20 45.28 4.02
1268 2367 2.970324 GTTGCGGTCGCTGGACAA 60.970 61.111 16.36 0.00 45.28 3.18
1293 2401 3.999297 GAGGAGGAGGTCGGCGAGT 62.999 68.421 11.20 0.00 0.00 4.18
1300 2408 4.719369 GGTCGGCGAGTTCGTGCT 62.719 66.667 11.20 0.00 42.22 4.40
1303 2411 2.733218 CGGCGAGTTCGTGCTTCA 60.733 61.111 0.00 0.00 42.22 3.02
1418 2527 2.050350 CGAGGAAGAGGTACCGCCA 61.050 63.158 12.54 0.00 40.61 5.69
1438 2547 2.360726 TGTCGGAGCTCTACGCCA 60.361 61.111 14.64 2.53 38.34 5.69
1442 2551 2.184579 GGAGCTCTACGCCACCAC 59.815 66.667 14.64 0.00 40.39 4.16
1444 2553 3.701604 GAGCTCTACGCCACCACGG 62.702 68.421 6.43 0.00 40.39 4.94
1448 2557 4.446413 CTACGCCACCACGGGACC 62.446 72.222 0.00 0.00 37.37 4.46
1491 2600 3.306364 CCGCAAAGAAGAAGAGGAAGAGA 60.306 47.826 0.00 0.00 0.00 3.10
1555 2697 4.391155 AGGGCTTTTGTGTAATTACGTCA 58.609 39.130 10.92 9.59 0.00 4.35
1601 2743 0.682852 TCTTTTCCGAGGCGAAAGGA 59.317 50.000 13.75 0.00 36.01 3.36
1637 2779 2.633481 AGAAGAAGAAGGTGGTTAGCGT 59.367 45.455 0.00 0.00 0.00 5.07
1665 2807 9.323985 TCCACTTTTCGAATTTGAATTTGAATT 57.676 25.926 16.07 5.47 44.22 2.17
1680 2822 0.613572 GAATTTGGGCTTCCGGGGAA 60.614 55.000 0.00 0.00 0.00 3.97
1701 2854 1.948391 GGTCCCACCCAACTACTACT 58.052 55.000 0.00 0.00 30.04 2.57
1702 2855 1.553704 GGTCCCACCCAACTACTACTG 59.446 57.143 0.00 0.00 30.04 2.74
1703 2856 1.066358 GTCCCACCCAACTACTACTGC 60.066 57.143 0.00 0.00 0.00 4.40
1704 2857 0.252197 CCCACCCAACTACTACTGCC 59.748 60.000 0.00 0.00 0.00 4.85
1705 2858 1.276622 CCACCCAACTACTACTGCCT 58.723 55.000 0.00 0.00 0.00 4.75
1706 2859 1.207329 CCACCCAACTACTACTGCCTC 59.793 57.143 0.00 0.00 0.00 4.70
1707 2860 1.207329 CACCCAACTACTACTGCCTCC 59.793 57.143 0.00 0.00 0.00 4.30
1708 2861 0.460311 CCCAACTACTACTGCCTCCG 59.540 60.000 0.00 0.00 0.00 4.63
1709 2862 1.183549 CCAACTACTACTGCCTCCGT 58.816 55.000 0.00 0.00 0.00 4.69
1710 2863 1.549170 CCAACTACTACTGCCTCCGTT 59.451 52.381 0.00 0.00 0.00 4.44
1711 2864 2.416972 CCAACTACTACTGCCTCCGTTC 60.417 54.545 0.00 0.00 0.00 3.95
1712 2865 1.093159 ACTACTACTGCCTCCGTTCG 58.907 55.000 0.00 0.00 0.00 3.95
1713 2866 1.339438 ACTACTACTGCCTCCGTTCGA 60.339 52.381 0.00 0.00 0.00 3.71
1714 2867 1.741706 CTACTACTGCCTCCGTTCGAA 59.258 52.381 0.00 0.00 0.00 3.71
1715 2868 0.963962 ACTACTGCCTCCGTTCGAAA 59.036 50.000 0.00 0.00 0.00 3.46
1716 2869 1.342174 ACTACTGCCTCCGTTCGAAAA 59.658 47.619 0.00 0.00 0.00 2.29
1717 2870 2.028385 ACTACTGCCTCCGTTCGAAAAT 60.028 45.455 0.00 0.00 0.00 1.82
1718 2871 2.754946 ACTGCCTCCGTTCGAAAATA 57.245 45.000 0.00 0.00 0.00 1.40
1719 2872 3.261981 ACTGCCTCCGTTCGAAAATAT 57.738 42.857 0.00 0.00 0.00 1.28
1720 2873 3.606687 ACTGCCTCCGTTCGAAAATATT 58.393 40.909 0.00 0.00 0.00 1.28
1721 2874 4.007659 ACTGCCTCCGTTCGAAAATATTT 58.992 39.130 0.00 0.00 0.00 1.40
1722 2875 4.142687 ACTGCCTCCGTTCGAAAATATTTG 60.143 41.667 0.00 0.00 0.00 2.32
1723 2876 3.754323 TGCCTCCGTTCGAAAATATTTGT 59.246 39.130 0.00 0.00 0.00 2.83
1724 2877 4.142773 TGCCTCCGTTCGAAAATATTTGTC 60.143 41.667 0.00 1.54 0.00 3.18
1725 2878 4.142773 GCCTCCGTTCGAAAATATTTGTCA 60.143 41.667 0.00 0.00 0.00 3.58
1726 2879 5.448632 GCCTCCGTTCGAAAATATTTGTCAT 60.449 40.000 0.00 0.00 0.00 3.06
1727 2880 6.551736 CCTCCGTTCGAAAATATTTGTCATT 58.448 36.000 0.00 0.00 0.00 2.57
1728 2881 7.677747 GCCTCCGTTCGAAAATATTTGTCATTA 60.678 37.037 0.00 0.00 0.00 1.90
1729 2882 8.178964 CCTCCGTTCGAAAATATTTGTCATTAA 58.821 33.333 0.00 0.00 0.00 1.40
1730 2883 9.549509 CTCCGTTCGAAAATATTTGTCATTAAA 57.450 29.630 0.00 0.00 0.00 1.52
1731 2884 9.894783 TCCGTTCGAAAATATTTGTCATTAAAA 57.105 25.926 0.00 0.00 0.00 1.52
1811 2964 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
1812 2965 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
1813 2966 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
1814 2967 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
1815 2968 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
1816 2969 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
1817 2970 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
1818 2971 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
1819 2972 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
1820 2973 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
1821 2974 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
1822 2975 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
1823 2976 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
1824 2977 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
1825 2978 0.251742 TTTCCGGACGGAGGGAGTAA 60.252 55.000 13.64 1.47 46.06 2.24
1891 3044 6.233905 TCCTCCGTGATCTGAATTTGAATA 57.766 37.500 0.00 0.00 0.00 1.75
1917 3070 9.799106 AATATGAATCTATCTCCATCCGTTTTT 57.201 29.630 0.00 0.00 0.00 1.94
2202 3455 8.514136 TTTTTGCACGAATAGGATGTAAAAAG 57.486 30.769 7.73 0.00 40.56 2.27
2205 3458 7.072177 TGCACGAATAGGATGTAAAAAGAAG 57.928 36.000 0.00 0.00 0.00 2.85
2210 3463 8.893727 ACGAATAGGATGTAAAAAGAAGGAATG 58.106 33.333 0.00 0.00 0.00 2.67
2211 3464 9.109393 CGAATAGGATGTAAAAAGAAGGAATGA 57.891 33.333 0.00 0.00 0.00 2.57
2358 4148 2.246719 AGCGCCTGAGGATTGTATTC 57.753 50.000 0.65 0.00 0.00 1.75
2508 5163 7.044181 TGATAGCTGATACAAAGAAACCTCAG 58.956 38.462 0.00 0.00 34.61 3.35
2612 5347 1.820877 GCTTCCTTGCTGATATGGGGG 60.821 57.143 0.00 0.00 0.00 5.40
2692 5427 2.635915 AGGACACGTTGGAACTCCATAA 59.364 45.455 0.00 0.00 46.97 1.90
2742 6301 3.856206 ACCTCCAATGTACCCCTAATTGT 59.144 43.478 0.00 0.00 30.84 2.71
2750 6309 7.370383 CAATGTACCCCTAATTGTATTGCATC 58.630 38.462 0.00 0.00 0.00 3.91
2768 6327 4.154015 TGCATCGATTTGTGTGGACTTAAG 59.846 41.667 0.00 0.00 0.00 1.85
2769 6328 4.651994 CATCGATTTGTGTGGACTTAAGC 58.348 43.478 1.29 0.00 0.00 3.09
2770 6329 3.734463 TCGATTTGTGTGGACTTAAGCA 58.266 40.909 1.29 0.00 0.00 3.91
2771 6330 4.323417 TCGATTTGTGTGGACTTAAGCAT 58.677 39.130 1.29 0.00 0.00 3.79
2772 6331 4.154015 TCGATTTGTGTGGACTTAAGCATG 59.846 41.667 1.29 0.00 0.00 4.06
2773 6332 4.083324 CGATTTGTGTGGACTTAAGCATGT 60.083 41.667 1.29 0.00 0.00 3.21
2774 6333 5.121611 CGATTTGTGTGGACTTAAGCATGTA 59.878 40.000 1.29 0.00 0.00 2.29
2775 6334 5.682943 TTTGTGTGGACTTAAGCATGTAC 57.317 39.130 1.29 0.00 0.00 2.90
2776 6335 4.617253 TGTGTGGACTTAAGCATGTACT 57.383 40.909 1.29 0.00 0.00 2.73
2777 6336 4.566004 TGTGTGGACTTAAGCATGTACTC 58.434 43.478 1.29 0.00 0.00 2.59
2778 6337 3.933332 GTGTGGACTTAAGCATGTACTCC 59.067 47.826 1.29 0.66 0.00 3.85
2779 6338 3.055385 TGTGGACTTAAGCATGTACTCCC 60.055 47.826 1.29 0.00 0.00 4.30
2780 6339 3.197983 GTGGACTTAAGCATGTACTCCCT 59.802 47.826 1.29 0.00 0.00 4.20
2781 6340 3.844211 TGGACTTAAGCATGTACTCCCTT 59.156 43.478 1.29 0.00 0.00 3.95
2782 6341 4.081087 TGGACTTAAGCATGTACTCCCTTC 60.081 45.833 1.29 0.00 0.00 3.46
2783 6342 4.113354 GACTTAAGCATGTACTCCCTTCG 58.887 47.826 1.29 0.00 0.00 3.79
2784 6343 3.514309 ACTTAAGCATGTACTCCCTTCGT 59.486 43.478 1.29 0.00 0.00 3.85
2785 6344 4.020485 ACTTAAGCATGTACTCCCTTCGTT 60.020 41.667 1.29 0.00 0.00 3.85
2786 6345 2.674796 AGCATGTACTCCCTTCGTTC 57.325 50.000 0.00 0.00 0.00 3.95
2787 6346 1.135083 AGCATGTACTCCCTTCGTTCG 60.135 52.381 0.00 0.00 0.00 3.95
2788 6347 1.922570 CATGTACTCCCTTCGTTCGG 58.077 55.000 0.00 0.00 0.00 4.30
2789 6348 1.475280 CATGTACTCCCTTCGTTCGGA 59.525 52.381 0.00 0.00 0.00 4.55
2790 6349 1.619654 TGTACTCCCTTCGTTCGGAA 58.380 50.000 0.00 0.00 0.00 4.30
2791 6350 2.173519 TGTACTCCCTTCGTTCGGAAT 58.826 47.619 0.00 0.00 33.26 3.01
2792 6351 2.564062 TGTACTCCCTTCGTTCGGAATT 59.436 45.455 0.00 0.00 33.26 2.17
2793 6352 3.763360 TGTACTCCCTTCGTTCGGAATTA 59.237 43.478 0.00 0.00 33.26 1.40
2794 6353 3.242549 ACTCCCTTCGTTCGGAATTAC 57.757 47.619 0.00 0.00 33.26 1.89
2795 6354 2.830321 ACTCCCTTCGTTCGGAATTACT 59.170 45.455 0.00 0.00 33.26 2.24
2796 6355 3.119209 ACTCCCTTCGTTCGGAATTACTC 60.119 47.826 0.00 0.00 33.26 2.59
2797 6356 2.159338 TCCCTTCGTTCGGAATTACTCG 60.159 50.000 0.00 0.00 33.26 4.18
2798 6357 2.416431 CCCTTCGTTCGGAATTACTCGT 60.416 50.000 0.00 0.00 33.26 4.18
2799 6358 2.850647 CCTTCGTTCGGAATTACTCGTC 59.149 50.000 0.00 0.00 33.26 4.20
2800 6359 2.549633 TCGTTCGGAATTACTCGTCC 57.450 50.000 0.00 0.00 0.00 4.79
2801 6360 1.811965 TCGTTCGGAATTACTCGTCCA 59.188 47.619 0.00 0.00 33.10 4.02
2802 6361 2.228582 TCGTTCGGAATTACTCGTCCAA 59.771 45.455 0.00 0.00 33.10 3.53
2803 6362 2.597305 CGTTCGGAATTACTCGTCCAAG 59.403 50.000 0.00 0.00 33.10 3.61
2804 6363 3.671433 CGTTCGGAATTACTCGTCCAAGA 60.671 47.826 0.00 0.00 33.10 3.02
2805 6364 4.240096 GTTCGGAATTACTCGTCCAAGAA 58.760 43.478 0.00 0.00 33.10 2.52
2806 6365 4.524316 TCGGAATTACTCGTCCAAGAAA 57.476 40.909 0.00 0.00 33.10 2.52
2807 6366 5.080969 TCGGAATTACTCGTCCAAGAAAT 57.919 39.130 0.00 0.00 33.10 2.17
2808 6367 6.211587 TCGGAATTACTCGTCCAAGAAATA 57.788 37.500 0.00 0.00 33.10 1.40
2809 6368 6.632909 TCGGAATTACTCGTCCAAGAAATAA 58.367 36.000 0.00 0.00 33.10 1.40
2810 6369 7.098477 TCGGAATTACTCGTCCAAGAAATAAA 58.902 34.615 0.00 0.00 33.10 1.40
2811 6370 7.767198 TCGGAATTACTCGTCCAAGAAATAAAT 59.233 33.333 0.00 0.00 33.10 1.40
2812 6371 7.850982 CGGAATTACTCGTCCAAGAAATAAATG 59.149 37.037 0.00 0.00 33.10 2.32
2813 6372 8.674607 GGAATTACTCGTCCAAGAAATAAATGT 58.325 33.333 0.00 0.00 33.79 2.71
2819 6378 9.751542 ACTCGTCCAAGAAATAAATGTATCTAG 57.248 33.333 0.00 0.00 0.00 2.43
2820 6379 9.967346 CTCGTCCAAGAAATAAATGTATCTAGA 57.033 33.333 0.00 0.00 0.00 2.43
2854 6413 8.415950 AATTGTAGGTACATCCATTTTTGTGA 57.584 30.769 0.00 0.00 39.02 3.58
2855 6414 6.811253 TGTAGGTACATCCATTTTTGTGAC 57.189 37.500 0.00 0.00 39.02 3.67
2856 6415 6.299922 TGTAGGTACATCCATTTTTGTGACA 58.700 36.000 0.00 0.00 39.02 3.58
2857 6416 6.773200 TGTAGGTACATCCATTTTTGTGACAA 59.227 34.615 0.00 0.00 39.02 3.18
2858 6417 6.331369 AGGTACATCCATTTTTGTGACAAG 57.669 37.500 0.00 0.00 39.02 3.16
2859 6418 4.923281 GGTACATCCATTTTTGTGACAAGC 59.077 41.667 0.00 0.00 35.97 4.01
2860 6419 4.669206 ACATCCATTTTTGTGACAAGCA 57.331 36.364 0.00 0.00 0.00 3.91
2861 6420 5.021033 ACATCCATTTTTGTGACAAGCAA 57.979 34.783 0.00 0.00 0.00 3.91
2862 6421 5.613329 ACATCCATTTTTGTGACAAGCAAT 58.387 33.333 0.00 0.00 0.00 3.56
2863 6422 6.056884 ACATCCATTTTTGTGACAAGCAATT 58.943 32.000 0.00 0.00 0.00 2.32
2864 6423 6.543100 ACATCCATTTTTGTGACAAGCAATTT 59.457 30.769 0.00 0.00 0.00 1.82
2865 6424 6.601741 TCCATTTTTGTGACAAGCAATTTC 57.398 33.333 0.00 0.00 0.00 2.17
2866 6425 5.233902 TCCATTTTTGTGACAAGCAATTTCG 59.766 36.000 0.00 0.00 0.00 3.46
2867 6426 5.233902 CCATTTTTGTGACAAGCAATTTCGA 59.766 36.000 0.00 0.00 0.00 3.71
2868 6427 6.238049 CCATTTTTGTGACAAGCAATTTCGAA 60.238 34.615 0.00 0.00 0.00 3.71
2869 6428 5.694674 TTTTGTGACAAGCAATTTCGAAC 57.305 34.783 0.00 0.00 0.00 3.95
2870 6429 2.980586 TGTGACAAGCAATTTCGAACG 58.019 42.857 0.00 0.00 0.00 3.95
2871 6430 2.286713 TGTGACAAGCAATTTCGAACGG 60.287 45.455 0.00 0.00 0.00 4.44
2872 6431 2.032377 GTGACAAGCAATTTCGAACGGA 60.032 45.455 0.00 0.00 0.00 4.69
2873 6432 2.223144 TGACAAGCAATTTCGAACGGAG 59.777 45.455 0.00 0.00 0.00 4.63
2874 6433 2.478894 GACAAGCAATTTCGAACGGAGA 59.521 45.455 0.00 0.00 0.00 3.71
2875 6434 2.480419 ACAAGCAATTTCGAACGGAGAG 59.520 45.455 0.00 0.00 0.00 3.20
2876 6435 2.736721 CAAGCAATTTCGAACGGAGAGA 59.263 45.455 0.00 0.00 0.00 3.10
2986 6546 2.294074 GCAAATGGCCTATAACCGTCA 58.706 47.619 3.32 0.00 36.11 4.35
2989 6549 1.128200 ATGGCCTATAACCGTCAGCA 58.872 50.000 3.32 0.00 0.00 4.41
2993 6556 2.750712 GGCCTATAACCGTCAGCAAAAA 59.249 45.455 0.00 0.00 0.00 1.94
3024 6587 0.250295 TGCTACACTCGGCAAAAGCT 60.250 50.000 0.00 0.00 35.40 3.74
3043 6606 2.202236 TACCCGGCGTACACCTCTCT 62.202 60.000 6.01 0.00 0.00 3.10
3117 6680 4.599041 TGCCAAGAGCCAAACAGTATAAT 58.401 39.130 0.00 0.00 42.71 1.28
3138 6701 8.911247 ATAATTCGGCAAAATAAAGTGACTTC 57.089 30.769 0.00 0.00 0.00 3.01
3155 6718 1.969200 TTCCACGTCGGTTGGTTCCA 61.969 55.000 0.00 0.00 35.57 3.53
3324 6891 6.585416 TCCGTTCCTAGACAACTTTTTACTT 58.415 36.000 0.00 0.00 0.00 2.24
3328 6895 8.274248 CGTTCCTAGACAACTTTTTACTTCTTC 58.726 37.037 0.00 0.00 0.00 2.87
3330 6898 8.030913 TCCTAGACAACTTTTTACTTCTTCCT 57.969 34.615 0.00 0.00 0.00 3.36
3344 6913 1.575788 TCTTCCTCCCTGATCCTGCTA 59.424 52.381 0.00 0.00 0.00 3.49
3388 6957 5.457799 CACAAACAAGCATTTCAAGTCTCAG 59.542 40.000 0.00 0.00 0.00 3.35
3560 7135 6.100404 AGCAACACCACAATTATCACAAAT 57.900 33.333 0.00 0.00 0.00 2.32
3590 7165 7.559590 AAGAATTATCAAGTTCTTCCATCCG 57.440 36.000 0.00 0.00 39.75 4.18
3704 7279 8.646004 ACATACTGATTGTAATGATACTCTGCT 58.354 33.333 0.00 0.00 34.45 4.24
3776 7351 4.341806 ACTTGTTCATTGCATTCAGACCAA 59.658 37.500 0.00 0.00 0.00 3.67
3817 7392 3.990318 TCTACCTCTGTACATCGCATG 57.010 47.619 0.00 0.00 0.00 4.06
3833 7408 2.615447 CGCATGCCACTTCATCTACAAT 59.385 45.455 13.15 0.00 0.00 2.71
3897 7476 3.748048 AGCACATCATACATAATCCACGC 59.252 43.478 0.00 0.00 0.00 5.34
3949 7528 2.159393 GCATCGCAAGTGGCAATCTAAA 60.159 45.455 0.00 0.00 45.17 1.85
4016 7595 5.128991 GCCAAACTATCTAGGTGGACTACTT 59.871 44.000 11.42 0.00 35.68 2.24
4052 7632 0.395312 AAACCGGTGATCGTGGAGTT 59.605 50.000 8.52 0.00 37.11 3.01
4064 7644 1.071567 GTGGAGTTAGAGCACGTCGC 61.072 60.000 0.00 2.28 42.91 5.19
4065 7645 1.211969 GGAGTTAGAGCACGTCGCA 59.788 57.895 11.58 0.00 46.13 5.10
4066 7646 1.071567 GGAGTTAGAGCACGTCGCAC 61.072 60.000 11.58 6.14 46.13 5.34
4067 7647 0.109689 GAGTTAGAGCACGTCGCACT 60.110 55.000 12.59 12.59 46.13 4.40
4068 7648 1.129998 GAGTTAGAGCACGTCGCACTA 59.870 52.381 11.58 11.30 46.13 2.74
4069 7649 1.135746 AGTTAGAGCACGTCGCACTAC 60.136 52.381 13.48 10.29 42.58 2.73
4070 7650 1.135746 GTTAGAGCACGTCGCACTACT 60.136 52.381 13.48 9.01 42.58 2.57
4071 7651 2.014335 TAGAGCACGTCGCACTACTA 57.986 50.000 11.58 7.16 46.13 1.82
4072 7652 0.727970 AGAGCACGTCGCACTACTAG 59.272 55.000 11.58 0.00 46.13 2.57
4073 7653 0.248134 GAGCACGTCGCACTACTAGG 60.248 60.000 11.58 0.00 46.13 3.02
4074 7654 1.226603 GCACGTCGCACTACTAGGG 60.227 63.158 5.30 0.00 41.79 3.53
4075 7655 1.651240 GCACGTCGCACTACTAGGGA 61.651 60.000 5.30 0.00 41.79 4.20
4076 7656 0.806868 CACGTCGCACTACTAGGGAA 59.193 55.000 0.00 0.00 0.00 3.97
4077 7657 1.200716 CACGTCGCACTACTAGGGAAA 59.799 52.381 0.00 0.00 0.00 3.13
4078 7658 1.888512 ACGTCGCACTACTAGGGAAAA 59.111 47.619 0.00 0.00 0.00 2.29
4079 7659 2.257034 CGTCGCACTACTAGGGAAAAC 58.743 52.381 0.00 0.00 0.00 2.43
4080 7660 2.257034 GTCGCACTACTAGGGAAAACG 58.743 52.381 0.00 0.00 0.00 3.60
4081 7661 1.888512 TCGCACTACTAGGGAAAACGT 59.111 47.619 0.00 0.00 0.00 3.99
4082 7662 2.297033 TCGCACTACTAGGGAAAACGTT 59.703 45.455 0.00 0.00 0.00 3.99
4083 7663 3.505680 TCGCACTACTAGGGAAAACGTTA 59.494 43.478 0.00 0.00 0.00 3.18
4084 7664 4.158394 TCGCACTACTAGGGAAAACGTTAT 59.842 41.667 0.00 0.00 0.00 1.89
4085 7665 5.356751 TCGCACTACTAGGGAAAACGTTATA 59.643 40.000 0.00 0.00 0.00 0.98
4086 7666 5.456822 CGCACTACTAGGGAAAACGTTATAC 59.543 44.000 0.00 0.00 0.00 1.47
4087 7667 6.332630 GCACTACTAGGGAAAACGTTATACA 58.667 40.000 0.00 0.00 0.00 2.29
4088 7668 6.254373 GCACTACTAGGGAAAACGTTATACAC 59.746 42.308 0.00 0.00 0.00 2.90
4089 7669 7.315142 CACTACTAGGGAAAACGTTATACACA 58.685 38.462 0.00 0.00 0.00 3.72
4090 7670 7.487189 CACTACTAGGGAAAACGTTATACACAG 59.513 40.741 0.00 0.00 0.00 3.66
4091 7671 6.594788 ACTAGGGAAAACGTTATACACAGA 57.405 37.500 0.00 0.00 0.00 3.41
4092 7672 6.996509 ACTAGGGAAAACGTTATACACAGAA 58.003 36.000 0.00 0.00 0.00 3.02
4093 7673 6.870439 ACTAGGGAAAACGTTATACACAGAAC 59.130 38.462 0.00 0.00 0.00 3.01
4094 7674 5.861727 AGGGAAAACGTTATACACAGAACT 58.138 37.500 0.00 0.00 0.00 3.01
4095 7675 6.293698 AGGGAAAACGTTATACACAGAACTT 58.706 36.000 0.00 0.00 0.00 2.66
4096 7676 6.769341 AGGGAAAACGTTATACACAGAACTTT 59.231 34.615 0.00 0.00 0.00 2.66
4097 7677 7.933033 AGGGAAAACGTTATACACAGAACTTTA 59.067 33.333 0.00 0.00 0.00 1.85
4098 7678 8.225777 GGGAAAACGTTATACACAGAACTTTAG 58.774 37.037 0.00 0.00 0.00 1.85
4099 7679 7.743400 GGAAAACGTTATACACAGAACTTTAGC 59.257 37.037 0.00 0.00 0.00 3.09
4100 7680 7.718272 AAACGTTATACACAGAACTTTAGCA 57.282 32.000 0.00 0.00 0.00 3.49
4101 7681 6.946229 ACGTTATACACAGAACTTTAGCAG 57.054 37.500 0.00 0.00 0.00 4.24
4102 7682 6.453092 ACGTTATACACAGAACTTTAGCAGT 58.547 36.000 0.00 0.00 37.30 4.40
4103 7683 7.596494 ACGTTATACACAGAACTTTAGCAGTA 58.404 34.615 0.00 0.00 32.94 2.74
4104 7684 7.754027 ACGTTATACACAGAACTTTAGCAGTAG 59.246 37.037 0.00 0.00 32.94 2.57
4105 7685 7.253684 CGTTATACACAGAACTTTAGCAGTAGC 60.254 40.741 0.00 0.00 42.56 3.58
4118 7698 3.806316 GCAGTAGCGCTTGTTAAAAGA 57.194 42.857 18.68 0.00 0.00 2.52
4119 7699 3.737305 GCAGTAGCGCTTGTTAAAAGAG 58.263 45.455 18.68 0.00 0.00 2.85
4120 7700 3.737305 CAGTAGCGCTTGTTAAAAGAGC 58.263 45.455 18.68 2.58 42.25 4.09
4121 7701 3.186409 CAGTAGCGCTTGTTAAAAGAGCA 59.814 43.478 18.68 0.00 43.95 4.26
4122 7702 2.688364 AGCGCTTGTTAAAAGAGCAC 57.312 45.000 13.02 7.14 43.95 4.40
4123 7703 1.069906 AGCGCTTGTTAAAAGAGCACG 60.070 47.619 13.02 0.00 43.95 5.34
4124 7704 1.318251 CGCTTGTTAAAAGAGCACGC 58.682 50.000 6.74 0.00 36.22 5.34
4125 7705 1.069906 CGCTTGTTAAAAGAGCACGCT 60.070 47.619 0.00 0.00 36.22 5.07
4126 7706 2.156891 CGCTTGTTAAAAGAGCACGCTA 59.843 45.455 0.00 0.00 36.22 4.26
4127 7707 3.479949 GCTTGTTAAAAGAGCACGCTAC 58.520 45.455 0.00 0.00 36.45 3.58
4128 7708 3.186613 GCTTGTTAAAAGAGCACGCTACT 59.813 43.478 0.00 0.00 36.45 2.57
4129 7709 4.387862 GCTTGTTAAAAGAGCACGCTACTA 59.612 41.667 0.00 0.00 36.45 1.82
4130 7710 5.668132 GCTTGTTAAAAGAGCACGCTACTAC 60.668 44.000 0.00 0.00 36.45 2.73
4131 7711 5.130292 TGTTAAAAGAGCACGCTACTACT 57.870 39.130 0.00 0.00 0.00 2.57
4132 7712 6.258230 TGTTAAAAGAGCACGCTACTACTA 57.742 37.500 0.00 0.00 0.00 1.82
4133 7713 6.320171 TGTTAAAAGAGCACGCTACTACTAG 58.680 40.000 0.00 0.00 0.00 2.57
4134 7714 6.149973 TGTTAAAAGAGCACGCTACTACTAGA 59.850 38.462 0.00 0.00 0.00 2.43
4135 7715 5.838531 AAAAGAGCACGCTACTACTAGAT 57.161 39.130 0.00 0.00 0.00 1.98
4136 7716 6.939132 AAAAGAGCACGCTACTACTAGATA 57.061 37.500 0.00 0.00 0.00 1.98
4137 7717 6.548441 AAAGAGCACGCTACTACTAGATAG 57.452 41.667 0.00 0.00 36.89 2.08
4138 7718 3.998341 AGAGCACGCTACTACTAGATAGC 59.002 47.826 0.00 6.08 40.40 2.97
4139 7719 3.741249 AGCACGCTACTACTAGATAGCA 58.259 45.455 18.73 1.24 43.36 3.49
4140 7720 3.749088 AGCACGCTACTACTAGATAGCAG 59.251 47.826 18.73 14.85 43.36 4.24
4141 7721 3.499157 GCACGCTACTACTAGATAGCAGT 59.501 47.826 18.73 15.26 43.36 4.40
4142 7722 4.689812 GCACGCTACTACTAGATAGCAGTA 59.310 45.833 18.73 1.09 43.36 2.74
4143 7723 5.163933 GCACGCTACTACTAGATAGCAGTAG 60.164 48.000 17.58 17.58 46.17 2.57
4146 7726 5.459110 CTACTACTAGATAGCAGTAGCGC 57.541 47.826 12.26 0.00 46.25 5.92
4147 7727 2.737783 ACTACTAGATAGCAGTAGCGCG 59.262 50.000 0.00 0.00 46.25 6.86
4148 7728 3.803021 ACTACTAGATAGCAGTAGCGCGT 60.803 47.826 8.43 0.00 46.25 6.01
4149 7729 5.849130 ACTACTAGATAGCAGTAGCGCGTG 61.849 50.000 8.43 1.89 46.25 5.34
4154 7734 2.251075 GCAGTAGCGCGTGCAAAA 59.749 55.556 24.79 5.04 46.23 2.44
4155 7735 1.154225 GCAGTAGCGCGTGCAAAAT 60.154 52.632 24.79 7.12 46.23 1.82
4156 7736 0.096281 GCAGTAGCGCGTGCAAAATA 59.904 50.000 24.79 3.35 46.23 1.40
4157 7737 1.465020 GCAGTAGCGCGTGCAAAATAA 60.465 47.619 24.79 0.00 46.23 1.40
4158 7738 2.430956 CAGTAGCGCGTGCAAAATAAG 58.569 47.619 24.79 2.05 46.23 1.73
4159 7739 1.180166 GTAGCGCGTGCAAAATAAGC 58.820 50.000 24.79 0.00 46.23 3.09
4161 7741 2.979036 CGCGTGCAAAATAAGCGC 59.021 55.556 0.00 0.00 44.19 5.92
4164 7744 4.458164 GTGCAAAATAAGCGCGCT 57.542 50.000 31.32 31.32 33.44 5.92
4165 7745 1.983160 GTGCAAAATAAGCGCGCTG 59.017 52.632 37.24 22.90 33.44 5.18
4166 7746 1.801113 TGCAAAATAAGCGCGCTGC 60.801 52.632 37.24 31.49 46.98 5.25
4176 7756 2.893895 CGCGCTGCAGATGGACAT 60.894 61.111 20.43 0.00 0.00 3.06
4177 7757 1.592400 CGCGCTGCAGATGGACATA 60.592 57.895 20.43 0.00 0.00 2.29
4178 7758 0.947660 CGCGCTGCAGATGGACATAT 60.948 55.000 20.43 0.00 0.00 1.78
4179 7759 1.669795 CGCGCTGCAGATGGACATATA 60.670 52.381 20.43 0.00 0.00 0.86
4180 7760 2.625737 GCGCTGCAGATGGACATATAT 58.374 47.619 20.43 0.00 0.00 0.86
4181 7761 2.606725 GCGCTGCAGATGGACATATATC 59.393 50.000 20.43 0.00 0.00 1.63
4182 7762 3.853475 CGCTGCAGATGGACATATATCA 58.147 45.455 20.43 0.00 0.00 2.15
4183 7763 3.864003 CGCTGCAGATGGACATATATCAG 59.136 47.826 20.43 4.86 0.00 2.90
4184 7764 4.620097 CGCTGCAGATGGACATATATCAGT 60.620 45.833 20.43 0.00 0.00 3.41
4185 7765 5.393461 CGCTGCAGATGGACATATATCAGTA 60.393 44.000 20.43 0.00 0.00 2.74
4186 7766 6.041511 GCTGCAGATGGACATATATCAGTAG 58.958 44.000 20.43 0.00 0.00 2.57
4187 7767 5.970592 TGCAGATGGACATATATCAGTAGC 58.029 41.667 0.00 0.00 0.00 3.58
4188 7768 5.039984 GCAGATGGACATATATCAGTAGCG 58.960 45.833 0.00 0.00 0.00 4.26
4189 7769 5.039984 CAGATGGACATATATCAGTAGCGC 58.960 45.833 0.00 0.00 0.00 5.92
4190 7770 3.487563 TGGACATATATCAGTAGCGCG 57.512 47.619 0.00 0.00 0.00 6.86
4191 7771 2.817844 TGGACATATATCAGTAGCGCGT 59.182 45.455 8.43 0.00 0.00 6.01
4192 7772 3.119955 TGGACATATATCAGTAGCGCGTC 60.120 47.826 8.43 0.00 0.00 5.19
4193 7773 3.127203 GGACATATATCAGTAGCGCGTCT 59.873 47.826 8.43 8.22 0.00 4.18
4194 7774 4.336101 GACATATATCAGTAGCGCGTCTC 58.664 47.826 8.43 0.00 0.00 3.36
4195 7775 3.751698 ACATATATCAGTAGCGCGTCTCA 59.248 43.478 8.43 0.00 0.00 3.27
4196 7776 4.396478 ACATATATCAGTAGCGCGTCTCAT 59.604 41.667 8.43 0.00 0.00 2.90
4197 7777 2.971430 TATCAGTAGCGCGTCTCATC 57.029 50.000 8.43 0.71 0.00 2.92
4198 7778 0.040870 ATCAGTAGCGCGTCTCATCG 60.041 55.000 8.43 0.00 0.00 3.84
4199 7779 1.087771 TCAGTAGCGCGTCTCATCGA 61.088 55.000 8.43 0.00 0.00 3.59
4200 7780 0.248094 CAGTAGCGCGTCTCATCGAA 60.248 55.000 8.43 0.00 0.00 3.71
4201 7781 0.450583 AGTAGCGCGTCTCATCGAAA 59.549 50.000 8.43 0.00 0.00 3.46
4202 7782 1.135489 AGTAGCGCGTCTCATCGAAAA 60.135 47.619 8.43 0.00 0.00 2.29
4203 7783 1.007319 GTAGCGCGTCTCATCGAAAAC 60.007 52.381 8.43 0.00 0.00 2.43
4204 7784 0.388649 AGCGCGTCTCATCGAAAACT 60.389 50.000 8.43 0.00 0.00 2.66
4205 7785 0.023858 GCGCGTCTCATCGAAAACTC 59.976 55.000 8.43 0.00 0.00 3.01
4206 7786 0.291989 CGCGTCTCATCGAAAACTCG 59.708 55.000 0.00 0.00 0.00 4.18
4207 7787 0.023858 GCGTCTCATCGAAAACTCGC 59.976 55.000 10.61 10.61 36.06 5.03
4208 7788 1.618861 CGTCTCATCGAAAACTCGCT 58.381 50.000 0.00 0.00 0.00 4.93
4209 7789 2.782163 CGTCTCATCGAAAACTCGCTA 58.218 47.619 0.00 0.00 0.00 4.26
4210 7790 2.526688 CGTCTCATCGAAAACTCGCTAC 59.473 50.000 0.00 0.00 0.00 3.58
4211 7791 3.728268 CGTCTCATCGAAAACTCGCTACT 60.728 47.826 0.00 0.00 0.00 2.57
4212 7792 4.493708 CGTCTCATCGAAAACTCGCTACTA 60.494 45.833 0.00 0.00 0.00 1.82
4213 7793 4.729564 GTCTCATCGAAAACTCGCTACTAC 59.270 45.833 0.00 0.00 0.00 2.73
4214 7794 4.634883 TCTCATCGAAAACTCGCTACTACT 59.365 41.667 0.00 0.00 0.00 2.57
4215 7795 5.814188 TCTCATCGAAAACTCGCTACTACTA 59.186 40.000 0.00 0.00 0.00 1.82
4216 7796 6.314648 TCTCATCGAAAACTCGCTACTACTAA 59.685 38.462 0.00 0.00 0.00 2.24
4217 7797 6.845302 TCATCGAAAACTCGCTACTACTAAA 58.155 36.000 0.00 0.00 0.00 1.85
4218 7798 7.307694 TCATCGAAAACTCGCTACTACTAAAA 58.692 34.615 0.00 0.00 0.00 1.52
4219 7799 7.972277 TCATCGAAAACTCGCTACTACTAAAAT 59.028 33.333 0.00 0.00 0.00 1.82
4220 7800 8.592998 CATCGAAAACTCGCTACTACTAAAATT 58.407 33.333 0.00 0.00 0.00 1.82
4221 7801 8.166367 TCGAAAACTCGCTACTACTAAAATTC 57.834 34.615 0.00 0.00 0.00 2.17
4222 7802 7.274250 TCGAAAACTCGCTACTACTAAAATTCC 59.726 37.037 0.00 0.00 0.00 3.01
4223 7803 7.062605 CGAAAACTCGCTACTACTAAAATTCCA 59.937 37.037 0.00 0.00 0.00 3.53
4224 7804 8.611654 AAAACTCGCTACTACTAAAATTCCAA 57.388 30.769 0.00 0.00 0.00 3.53
4225 7805 8.788325 AAACTCGCTACTACTAAAATTCCAAT 57.212 30.769 0.00 0.00 0.00 3.16
4226 7806 8.421673 AACTCGCTACTACTAAAATTCCAATC 57.578 34.615 0.00 0.00 0.00 2.67
4227 7807 7.553334 ACTCGCTACTACTAAAATTCCAATCA 58.447 34.615 0.00 0.00 0.00 2.57
4228 7808 7.491696 ACTCGCTACTACTAAAATTCCAATCAC 59.508 37.037 0.00 0.00 0.00 3.06
4229 7809 7.553334 TCGCTACTACTAAAATTCCAATCACT 58.447 34.615 0.00 0.00 0.00 3.41
4230 7810 8.038944 TCGCTACTACTAAAATTCCAATCACTT 58.961 33.333 0.00 0.00 0.00 3.16
4231 7811 9.309516 CGCTACTACTAAAATTCCAATCACTTA 57.690 33.333 0.00 0.00 0.00 2.24
4235 7815 9.367444 ACTACTAAAATTCCAATCACTTAGACG 57.633 33.333 0.00 0.00 0.00 4.18
4236 7816 9.582431 CTACTAAAATTCCAATCACTTAGACGA 57.418 33.333 0.00 0.00 0.00 4.20
4238 7818 8.883731 ACTAAAATTCCAATCACTTAGACGATG 58.116 33.333 0.00 0.00 0.00 3.84
4239 7819 6.683974 AAATTCCAATCACTTAGACGATGG 57.316 37.500 0.00 0.00 32.07 3.51
4240 7820 3.819564 TCCAATCACTTAGACGATGGG 57.180 47.619 0.00 4.24 34.43 4.00
4241 7821 2.158957 TCCAATCACTTAGACGATGGGC 60.159 50.000 0.00 0.00 33.31 5.36
4242 7822 2.158900 CCAATCACTTAGACGATGGGCT 60.159 50.000 0.00 0.00 0.00 5.19
4243 7823 3.069586 CCAATCACTTAGACGATGGGCTA 59.930 47.826 0.00 0.00 0.00 3.93
4244 7824 4.051922 CAATCACTTAGACGATGGGCTAC 58.948 47.826 0.00 0.00 0.00 3.58
4245 7825 2.730382 TCACTTAGACGATGGGCTACA 58.270 47.619 0.00 0.00 0.00 2.74
4246 7826 2.426024 TCACTTAGACGATGGGCTACAC 59.574 50.000 0.00 0.00 0.00 2.90
4247 7827 2.165641 CACTTAGACGATGGGCTACACA 59.834 50.000 0.00 0.00 0.00 3.72
4248 7828 3.031736 ACTTAGACGATGGGCTACACAT 58.968 45.455 0.00 0.00 0.00 3.21
4249 7829 4.037565 CACTTAGACGATGGGCTACACATA 59.962 45.833 0.00 0.00 0.00 2.29
4250 7830 4.278669 ACTTAGACGATGGGCTACACATAG 59.721 45.833 0.00 0.00 0.00 2.23
4251 7831 2.667470 AGACGATGGGCTACACATAGT 58.333 47.619 0.00 0.00 36.98 2.12
4252 7832 3.828921 AGACGATGGGCTACACATAGTA 58.171 45.455 0.00 0.00 34.92 1.82
4265 7845 5.692613 ACACATAGTAGTAGCGATCTTCC 57.307 43.478 0.00 0.00 0.00 3.46
4266 7846 5.131067 ACACATAGTAGTAGCGATCTTCCA 58.869 41.667 0.00 0.00 0.00 3.53
4267 7847 5.593095 ACACATAGTAGTAGCGATCTTCCAA 59.407 40.000 0.00 0.00 0.00 3.53
4268 7848 6.096423 ACACATAGTAGTAGCGATCTTCCAAA 59.904 38.462 0.00 0.00 0.00 3.28
4269 7849 6.978659 CACATAGTAGTAGCGATCTTCCAAAA 59.021 38.462 0.00 0.00 0.00 2.44
4270 7850 7.491372 CACATAGTAGTAGCGATCTTCCAAAAA 59.509 37.037 0.00 0.00 0.00 1.94
4271 7851 7.491696 ACATAGTAGTAGCGATCTTCCAAAAAC 59.508 37.037 0.00 0.00 0.00 2.43
4272 7852 5.176592 AGTAGTAGCGATCTTCCAAAAACC 58.823 41.667 0.00 0.00 0.00 3.27
4273 7853 3.000727 AGTAGCGATCTTCCAAAAACCG 58.999 45.455 0.00 0.00 0.00 4.44
4274 7854 0.521735 AGCGATCTTCCAAAAACCGC 59.478 50.000 0.00 0.00 41.22 5.68
4275 7855 0.793104 GCGATCTTCCAAAAACCGCG 60.793 55.000 0.00 0.00 0.00 6.46
4276 7856 0.793104 CGATCTTCCAAAAACCGCGC 60.793 55.000 0.00 0.00 0.00 6.86
4277 7857 0.521735 GATCTTCCAAAAACCGCGCT 59.478 50.000 5.56 0.00 0.00 5.92
4278 7858 1.735571 GATCTTCCAAAAACCGCGCTA 59.264 47.619 5.56 0.00 0.00 4.26
4279 7859 0.869730 TCTTCCAAAAACCGCGCTAC 59.130 50.000 5.56 0.00 0.00 3.58
4280 7860 0.109919 CTTCCAAAAACCGCGCTACC 60.110 55.000 5.56 0.00 0.00 3.18
4281 7861 1.843734 TTCCAAAAACCGCGCTACCG 61.844 55.000 5.56 0.00 37.57 4.02
4297 7877 6.315274 CGCTACCGCTAATAAACTTATAGC 57.685 41.667 0.00 0.00 0.00 2.97
4298 7878 5.860182 CGCTACCGCTAATAAACTTATAGCA 59.140 40.000 5.06 0.00 33.71 3.49
4299 7879 6.033619 CGCTACCGCTAATAAACTTATAGCAG 59.966 42.308 5.06 0.00 33.71 4.24
4300 7880 6.183360 GCTACCGCTAATAAACTTATAGCAGC 60.183 42.308 5.06 2.86 33.71 5.25
4301 7881 4.684703 ACCGCTAATAAACTTATAGCAGCG 59.315 41.667 17.51 17.51 41.11 5.18
4302 7882 4.434330 CCGCTAATAAACTTATAGCAGCGC 60.434 45.833 18.32 0.00 40.66 5.92
4303 7883 4.629065 GCTAATAAACTTATAGCAGCGCG 58.371 43.478 0.00 0.00 34.22 6.86
4304 7884 4.150098 GCTAATAAACTTATAGCAGCGCGT 59.850 41.667 8.43 0.00 34.22 6.01
4305 7885 5.333111 GCTAATAAACTTATAGCAGCGCGTT 60.333 40.000 8.43 0.00 34.22 4.84
4306 7886 5.479716 AATAAACTTATAGCAGCGCGTTT 57.520 34.783 8.43 6.38 0.00 3.60
4307 7887 6.592798 AATAAACTTATAGCAGCGCGTTTA 57.407 33.333 8.43 12.95 33.19 2.01
4308 7888 6.780706 ATAAACTTATAGCAGCGCGTTTAT 57.219 33.333 8.43 15.46 34.52 1.40
4309 7889 4.452890 AACTTATAGCAGCGCGTTTATG 57.547 40.909 8.43 3.02 0.00 1.90
4310 7890 3.454375 ACTTATAGCAGCGCGTTTATGT 58.546 40.909 8.43 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
99 106 5.743636 ATTGAGAAGCTATTTTTGGGCAA 57.256 34.783 0.00 0.00 0.00 4.52
100 107 6.350949 GGTTATTGAGAAGCTATTTTTGGGCA 60.351 38.462 0.00 0.00 0.00 5.36
114 121 6.681729 AGAGTAGTGTTGGGTTATTGAGAA 57.318 37.500 0.00 0.00 0.00 2.87
115 122 6.464222 CAAGAGTAGTGTTGGGTTATTGAGA 58.536 40.000 0.00 0.00 0.00 3.27
122 129 2.172717 AGTGCAAGAGTAGTGTTGGGTT 59.827 45.455 9.31 0.00 0.00 4.11
193 200 3.779083 TAGGGGCCTGGGAGGAGG 61.779 72.222 0.84 0.00 37.67 4.30
206 213 1.289530 AGGAGAGGGACAAGAGTAGGG 59.710 57.143 0.00 0.00 0.00 3.53
217 224 1.618030 GAGAGGAGCAGGAGAGGGA 59.382 63.158 0.00 0.00 0.00 4.20
393 411 3.889538 ACTAGGCCCTTTGTTTTTCTCAC 59.110 43.478 0.00 0.00 0.00 3.51
399 417 3.595190 AGACACTAGGCCCTTTGTTTT 57.405 42.857 0.00 0.00 0.00 2.43
405 423 5.780958 AATCTAAAAGACACTAGGCCCTT 57.219 39.130 0.00 0.00 0.00 3.95
410 428 6.801539 TGTGCAAATCTAAAAGACACTAGG 57.198 37.500 0.00 0.00 0.00 3.02
421 439 3.894427 TGGAGCCTTTTGTGCAAATCTAA 59.106 39.130 0.00 0.00 0.00 2.10
422 440 3.495331 TGGAGCCTTTTGTGCAAATCTA 58.505 40.909 0.00 0.00 0.00 1.98
491 511 4.153655 GTGATCGATGATGGGTGATGATTG 59.846 45.833 0.54 0.00 0.00 2.67
500 520 1.669115 GGCGGTGATCGATGATGGG 60.669 63.158 0.54 0.00 42.43 4.00
520 540 4.343323 CCGGTGGTGCCATGGTGA 62.343 66.667 14.67 0.00 36.97 4.02
528 548 2.027625 CGTCTTTCTCCGGTGGTGC 61.028 63.158 0.00 0.00 0.00 5.01
567 588 3.149196 TGCAAATGGAGGTCTTTCAGAC 58.851 45.455 0.00 0.00 44.32 3.51
571 592 3.416156 ACTCTGCAAATGGAGGTCTTTC 58.584 45.455 5.76 0.00 34.00 2.62
572 593 3.515602 ACTCTGCAAATGGAGGTCTTT 57.484 42.857 5.76 0.00 34.00 2.52
594 615 2.076100 CTATCGGTTCACAAAGCAGCA 58.924 47.619 0.00 0.00 33.03 4.41
720 1809 1.909287 TGGTGGACGGAATCGGTCA 60.909 57.895 19.99 6.23 41.39 4.02
769 1858 1.076923 GGGAGAGGAGACGCTGGTA 60.077 63.158 0.00 0.00 42.18 3.25
770 1859 2.363147 GGGAGAGGAGACGCTGGT 60.363 66.667 0.00 0.00 42.18 4.00
855 1944 3.761897 TGAAAAGAAACGGGATGGATGT 58.238 40.909 0.00 0.00 0.00 3.06
873 1962 1.210234 AGATGTGTGGATGCGGATGAA 59.790 47.619 0.00 0.00 0.00 2.57
1105 2204 3.620428 CGCCTCGTAGTGCATGCG 61.620 66.667 14.09 0.00 38.51 4.73
1137 2236 2.288025 GGAGGAGGTTGTGGCCGTA 61.288 63.158 0.00 0.00 0.00 4.02
1146 2245 1.215679 TCGAGGGAGAGGAGGAGGTT 61.216 60.000 0.00 0.00 0.00 3.50
1155 2254 3.591835 GAGCGCCTCGAGGGAGAG 61.592 72.222 32.06 9.96 43.27 3.20
1193 2292 2.590575 CAACAACCACGGCGAGGT 60.591 61.111 23.43 23.43 42.34 3.85
1199 2298 2.833794 TCTTCTCTTCAACAACCACGG 58.166 47.619 0.00 0.00 0.00 4.94
1201 2300 3.565902 CCCTTCTTCTCTTCAACAACCAC 59.434 47.826 0.00 0.00 0.00 4.16
1202 2301 3.435026 CCCCTTCTTCTCTTCAACAACCA 60.435 47.826 0.00 0.00 0.00 3.67
1204 2303 4.086706 TCCCCTTCTTCTCTTCAACAAC 57.913 45.455 0.00 0.00 0.00 3.32
1205 2304 4.563580 CGATCCCCTTCTTCTCTTCAACAA 60.564 45.833 0.00 0.00 0.00 2.83
1206 2305 3.055819 CGATCCCCTTCTTCTCTTCAACA 60.056 47.826 0.00 0.00 0.00 3.33
1207 2306 3.055747 ACGATCCCCTTCTTCTCTTCAAC 60.056 47.826 0.00 0.00 0.00 3.18
1208 2307 3.173965 ACGATCCCCTTCTTCTCTTCAA 58.826 45.455 0.00 0.00 0.00 2.69
1209 2308 2.761208 GACGATCCCCTTCTTCTCTTCA 59.239 50.000 0.00 0.00 0.00 3.02
1219 2318 0.752376 GTCTCCTCGACGATCCCCTT 60.752 60.000 0.00 0.00 32.04 3.95
1222 2321 0.748729 ACTGTCTCCTCGACGATCCC 60.749 60.000 0.00 0.00 45.87 3.85
1239 2338 2.489275 CCGCAACAACAAGGGCACT 61.489 57.895 0.00 0.00 0.00 4.40
1241 2340 2.441164 ACCGCAACAACAAGGGCA 60.441 55.556 0.00 0.00 0.00 5.36
1250 2349 3.741830 TTGTCCAGCGACCGCAACA 62.742 57.895 16.97 13.69 44.88 3.33
1252 2351 2.664851 CTTGTCCAGCGACCGCAA 60.665 61.111 16.97 0.83 44.88 4.85
1263 2362 4.821589 CTCCTCGCCCGCTTGTCC 62.822 72.222 0.00 0.00 0.00 4.02
1264 2363 4.821589 CCTCCTCGCCCGCTTGTC 62.822 72.222 0.00 0.00 0.00 3.18
1266 2365 4.521062 CTCCTCCTCGCCCGCTTG 62.521 72.222 0.00 0.00 0.00 4.01
1284 2392 2.717809 GAAGCACGAACTCGCCGAC 61.718 63.158 0.00 0.00 44.43 4.79
1293 2401 0.756294 TGAGGTCCTTGAAGCACGAA 59.244 50.000 0.00 0.00 0.00 3.85
1300 2408 1.052124 ACCACGGTGAGGTCCTTGAA 61.052 55.000 10.28 0.00 32.90 2.69
1381 2490 4.154347 CCTCCTGTCCAGCTCCGC 62.154 72.222 0.00 0.00 0.00 5.54
1382 2491 3.465403 CCCTCCTGTCCAGCTCCG 61.465 72.222 0.00 0.00 0.00 4.63
1438 2547 2.516888 CCTTCACTGGTCCCGTGGT 61.517 63.158 12.95 0.00 33.31 4.16
1442 2551 4.760047 CGGCCTTCACTGGTCCCG 62.760 72.222 0.00 0.00 0.00 5.14
1463 2572 0.801251 CTTCTTCTTTGCGGCAGGAG 59.199 55.000 1.67 5.95 0.00 3.69
1464 2573 0.396435 TCTTCTTCTTTGCGGCAGGA 59.604 50.000 1.67 3.14 0.00 3.86
1473 2582 4.656112 TGGTGTCTCTTCCTCTTCTTCTTT 59.344 41.667 0.00 0.00 0.00 2.52
1523 2664 4.905429 ACACAAAAGCCCTTTTTCAACTT 58.095 34.783 3.39 0.00 40.45 2.66
1555 2697 0.033920 GGAAACAACCCTACGACCGT 59.966 55.000 0.00 0.00 0.00 4.83
1601 2743 5.949735 TCTTCTTCTTTGTTTGTCGCTTTT 58.050 33.333 0.00 0.00 0.00 2.27
1637 2779 7.711846 TCAAATTCAAATTCGAAAAGTGGAGA 58.288 30.769 0.00 0.00 0.00 3.71
1697 2850 2.074547 TTTTCGAACGGAGGCAGTAG 57.925 50.000 0.00 0.00 0.00 2.57
1698 2851 2.754946 ATTTTCGAACGGAGGCAGTA 57.245 45.000 0.00 0.00 0.00 2.74
1699 2852 2.754946 TATTTTCGAACGGAGGCAGT 57.245 45.000 0.00 0.00 0.00 4.40
1700 2853 4.142687 ACAAATATTTTCGAACGGAGGCAG 60.143 41.667 0.00 0.00 0.00 4.85
1701 2854 3.754323 ACAAATATTTTCGAACGGAGGCA 59.246 39.130 0.00 0.00 0.00 4.75
1702 2855 4.142773 TGACAAATATTTTCGAACGGAGGC 60.143 41.667 0.00 0.00 0.00 4.70
1703 2856 5.539582 TGACAAATATTTTCGAACGGAGG 57.460 39.130 0.00 0.00 0.00 4.30
1704 2857 9.549509 TTTAATGACAAATATTTTCGAACGGAG 57.450 29.630 0.00 0.00 0.00 4.63
1705 2858 9.894783 TTTTAATGACAAATATTTTCGAACGGA 57.105 25.926 0.00 0.00 0.00 4.69
1786 2939 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
1787 2940 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
1788 2941 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
1789 2942 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
1790 2943 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
1791 2944 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
1792 2945 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
1793 2946 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
1794 2947 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
1795 2948 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
1796 2949 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
1797 2950 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
1798 2951 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
1799 2952 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
1800 2953 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
1801 2954 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
1802 2955 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
1803 2956 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
1804 2957 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
1805 2958 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
1806 2959 0.251742 TTACTCCCTCCGTCCGGAAA 60.252 55.000 5.23 0.00 44.66 3.13
1807 2960 0.967380 GTTACTCCCTCCGTCCGGAA 60.967 60.000 5.23 0.00 44.66 4.30
1808 2961 1.379044 GTTACTCCCTCCGTCCGGA 60.379 63.158 0.00 0.00 42.90 5.14
1809 2962 0.107017 TAGTTACTCCCTCCGTCCGG 60.107 60.000 0.00 0.00 0.00 5.14
1810 2963 1.020437 GTAGTTACTCCCTCCGTCCG 58.980 60.000 0.00 0.00 0.00 4.79
1811 2964 2.433662 AGTAGTTACTCCCTCCGTCC 57.566 55.000 0.00 0.00 0.00 4.79
1812 2965 3.509184 ACAAAGTAGTTACTCCCTCCGTC 59.491 47.826 0.00 0.00 34.99 4.79
1813 2966 3.257624 CACAAAGTAGTTACTCCCTCCGT 59.742 47.826 0.00 0.00 34.99 4.69
1814 2967 3.846360 CACAAAGTAGTTACTCCCTCCG 58.154 50.000 0.00 0.00 34.99 4.63
1815 2968 3.261137 AGCACAAAGTAGTTACTCCCTCC 59.739 47.826 0.00 0.00 34.99 4.30
1816 2969 4.021368 TGAGCACAAAGTAGTTACTCCCTC 60.021 45.833 0.00 0.00 34.99 4.30
1817 2970 3.901844 TGAGCACAAAGTAGTTACTCCCT 59.098 43.478 0.00 0.00 34.99 4.20
1818 2971 4.267349 TGAGCACAAAGTAGTTACTCCC 57.733 45.455 0.00 0.00 34.99 4.30
1819 2972 5.479306 TGATGAGCACAAAGTAGTTACTCC 58.521 41.667 0.00 0.00 34.99 3.85
1820 2973 6.090088 CACTGATGAGCACAAAGTAGTTACTC 59.910 42.308 3.19 0.00 34.99 2.59
1821 2974 5.928839 CACTGATGAGCACAAAGTAGTTACT 59.071 40.000 3.19 0.00 38.39 2.24
1822 2975 5.389935 GCACTGATGAGCACAAAGTAGTTAC 60.390 44.000 3.19 0.00 0.00 2.50
1823 2976 4.690748 GCACTGATGAGCACAAAGTAGTTA 59.309 41.667 3.19 0.00 0.00 2.24
1824 2977 3.499918 GCACTGATGAGCACAAAGTAGTT 59.500 43.478 3.19 0.00 0.00 2.24
1825 2978 3.070018 GCACTGATGAGCACAAAGTAGT 58.930 45.455 3.19 0.00 0.00 2.73
1891 3044 9.799106 AAAAACGGATGGAGATAGATTCATATT 57.201 29.630 0.00 0.00 0.00 1.28
1917 3070 7.201574 GGTCATGTGTGCGTGTATAGAAATTAA 60.202 37.037 0.00 0.00 33.51 1.40
1930 3083 1.243342 CCCATTGGTCATGTGTGCGT 61.243 55.000 1.20 0.00 0.00 5.24
2185 3438 9.109393 TCATTCCTTCTTTTTACATCCTATTCG 57.891 33.333 0.00 0.00 0.00 3.34
2215 3468 9.071276 GCCAAGATAATCAAGATCAAAATCCTA 57.929 33.333 0.00 0.00 31.78 2.94
2216 3469 7.562454 TGCCAAGATAATCAAGATCAAAATCCT 59.438 33.333 0.00 0.00 31.78 3.24
2401 4191 5.202004 TGACTGAGTAAGATCTAAGACCCC 58.798 45.833 0.00 0.00 0.00 4.95
2508 5163 3.766151 TGAATATCACCGACGAGTCAAC 58.234 45.455 0.00 0.00 0.00 3.18
2712 5447 5.914716 AGGGGTACATTGGAGGTTATAATCA 59.085 40.000 0.00 0.00 0.00 2.57
2742 6301 4.260985 AGTCCACACAAATCGATGCAATA 58.739 39.130 0.00 0.00 0.00 1.90
2750 6309 4.083324 ACATGCTTAAGTCCACACAAATCG 60.083 41.667 4.02 0.00 0.00 3.34
2768 6327 1.278238 CGAACGAAGGGAGTACATGC 58.722 55.000 0.00 0.00 0.00 4.06
2769 6328 1.475280 TCCGAACGAAGGGAGTACATG 59.525 52.381 0.00 0.00 0.00 3.21
2770 6329 1.843368 TCCGAACGAAGGGAGTACAT 58.157 50.000 0.00 0.00 0.00 2.29
2771 6330 1.619654 TTCCGAACGAAGGGAGTACA 58.380 50.000 0.00 0.00 33.01 2.90
2772 6331 2.955477 ATTCCGAACGAAGGGAGTAC 57.045 50.000 0.00 0.00 32.78 2.73
2773 6332 4.019174 AGTAATTCCGAACGAAGGGAGTA 58.981 43.478 0.00 0.00 32.78 2.59
2774 6333 2.830321 AGTAATTCCGAACGAAGGGAGT 59.170 45.455 0.00 0.00 32.78 3.85
2775 6334 3.445857 GAGTAATTCCGAACGAAGGGAG 58.554 50.000 0.00 0.00 32.78 4.30
2776 6335 2.159338 CGAGTAATTCCGAACGAAGGGA 60.159 50.000 0.00 0.00 32.78 4.20
2777 6336 2.190981 CGAGTAATTCCGAACGAAGGG 58.809 52.381 0.00 0.00 32.78 3.95
2778 6337 2.850647 GACGAGTAATTCCGAACGAAGG 59.149 50.000 0.00 0.00 32.78 3.46
2779 6338 2.850647 GGACGAGTAATTCCGAACGAAG 59.149 50.000 0.00 0.00 32.78 3.79
2780 6339 2.228582 TGGACGAGTAATTCCGAACGAA 59.771 45.455 0.00 0.00 34.14 3.85
2781 6340 1.811965 TGGACGAGTAATTCCGAACGA 59.188 47.619 0.00 0.00 0.00 3.85
2782 6341 2.267188 TGGACGAGTAATTCCGAACG 57.733 50.000 0.00 0.00 0.00 3.95
2783 6342 3.841643 TCTTGGACGAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
2784 6343 4.524316 TTCTTGGACGAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
2785 6344 4.524316 TTTCTTGGACGAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
2786 6345 6.897259 TTATTTCTTGGACGAGTAATTCCG 57.103 37.500 0.00 0.00 0.00 4.30
2787 6346 8.674607 ACATTTATTTCTTGGACGAGTAATTCC 58.325 33.333 0.00 0.00 0.00 3.01
2793 6352 9.751542 CTAGATACATTTATTTCTTGGACGAGT 57.248 33.333 0.00 0.00 0.00 4.18
2794 6353 9.967346 TCTAGATACATTTATTTCTTGGACGAG 57.033 33.333 0.00 0.00 0.00 4.18
2828 6387 9.521841 TCACAAAAATGGATGTACCTACAATTA 57.478 29.630 0.00 0.00 39.99 1.40
2829 6388 8.303876 GTCACAAAAATGGATGTACCTACAATT 58.696 33.333 0.00 0.00 39.99 2.32
2830 6389 7.450014 TGTCACAAAAATGGATGTACCTACAAT 59.550 33.333 0.00 0.00 39.99 2.71
2831 6390 6.773200 TGTCACAAAAATGGATGTACCTACAA 59.227 34.615 0.00 0.00 39.99 2.41
2832 6391 6.299922 TGTCACAAAAATGGATGTACCTACA 58.700 36.000 0.00 0.00 40.98 2.74
2833 6392 6.811253 TGTCACAAAAATGGATGTACCTAC 57.189 37.500 0.00 0.00 39.86 3.18
2834 6393 6.072175 GCTTGTCACAAAAATGGATGTACCTA 60.072 38.462 0.00 0.00 39.86 3.08
2835 6394 5.278957 GCTTGTCACAAAAATGGATGTACCT 60.279 40.000 0.00 0.00 39.86 3.08
2836 6395 4.923281 GCTTGTCACAAAAATGGATGTACC 59.077 41.667 0.00 0.00 39.54 3.34
2837 6396 5.527951 TGCTTGTCACAAAAATGGATGTAC 58.472 37.500 0.00 0.00 0.00 2.90
2838 6397 5.781210 TGCTTGTCACAAAAATGGATGTA 57.219 34.783 0.00 0.00 0.00 2.29
2839 6398 4.669206 TGCTTGTCACAAAAATGGATGT 57.331 36.364 0.00 0.00 0.00 3.06
2840 6399 6.548441 AATTGCTTGTCACAAAAATGGATG 57.452 33.333 0.00 0.00 0.00 3.51
2841 6400 6.073657 CGAAATTGCTTGTCACAAAAATGGAT 60.074 34.615 0.00 0.00 0.00 3.41
2842 6401 5.233902 CGAAATTGCTTGTCACAAAAATGGA 59.766 36.000 0.00 0.00 0.00 3.41
2843 6402 5.233902 TCGAAATTGCTTGTCACAAAAATGG 59.766 36.000 0.00 0.00 0.00 3.16
2844 6403 6.271396 TCGAAATTGCTTGTCACAAAAATG 57.729 33.333 0.00 0.00 0.00 2.32
2845 6404 6.507771 CGTTCGAAATTGCTTGTCACAAAAAT 60.508 34.615 0.00 0.00 0.00 1.82
2846 6405 5.220117 CGTTCGAAATTGCTTGTCACAAAAA 60.220 36.000 0.00 0.00 0.00 1.94
2847 6406 4.264145 CGTTCGAAATTGCTTGTCACAAAA 59.736 37.500 0.00 0.00 0.00 2.44
2848 6407 3.788694 CGTTCGAAATTGCTTGTCACAAA 59.211 39.130 0.00 0.00 0.00 2.83
2849 6408 3.358775 CGTTCGAAATTGCTTGTCACAA 58.641 40.909 0.00 0.00 0.00 3.33
2850 6409 2.286713 CCGTTCGAAATTGCTTGTCACA 60.287 45.455 0.00 0.00 0.00 3.58
2851 6410 2.032377 TCCGTTCGAAATTGCTTGTCAC 60.032 45.455 0.00 0.00 0.00 3.67
2852 6411 2.214347 TCCGTTCGAAATTGCTTGTCA 58.786 42.857 0.00 0.00 0.00 3.58
2853 6412 2.478894 TCTCCGTTCGAAATTGCTTGTC 59.521 45.455 0.00 0.00 0.00 3.18
2854 6413 2.480419 CTCTCCGTTCGAAATTGCTTGT 59.520 45.455 0.00 0.00 0.00 3.16
2855 6414 2.736721 TCTCTCCGTTCGAAATTGCTTG 59.263 45.455 0.00 0.00 0.00 4.01
2856 6415 2.996621 CTCTCTCCGTTCGAAATTGCTT 59.003 45.455 0.00 0.00 0.00 3.91
2857 6416 2.028930 ACTCTCTCCGTTCGAAATTGCT 60.029 45.455 0.00 0.00 0.00 3.91
2858 6417 2.338500 ACTCTCTCCGTTCGAAATTGC 58.662 47.619 0.00 0.00 0.00 3.56
2859 6418 3.542704 CGTACTCTCTCCGTTCGAAATTG 59.457 47.826 0.00 0.00 0.00 2.32
2860 6419 3.190118 ACGTACTCTCTCCGTTCGAAATT 59.810 43.478 0.00 0.00 0.00 1.82
2861 6420 2.746362 ACGTACTCTCTCCGTTCGAAAT 59.254 45.455 0.00 0.00 0.00 2.17
2862 6421 2.096069 CACGTACTCTCTCCGTTCGAAA 60.096 50.000 0.00 0.00 31.46 3.46
2863 6422 1.462283 CACGTACTCTCTCCGTTCGAA 59.538 52.381 0.00 0.00 31.46 3.71
2864 6423 1.073964 CACGTACTCTCTCCGTTCGA 58.926 55.000 0.00 0.00 31.46 3.71
2865 6424 0.520827 GCACGTACTCTCTCCGTTCG 60.521 60.000 0.00 0.00 31.46 3.95
2866 6425 0.520404 TGCACGTACTCTCTCCGTTC 59.480 55.000 0.00 0.00 31.46 3.95
2867 6426 0.522180 CTGCACGTACTCTCTCCGTT 59.478 55.000 0.00 0.00 31.46 4.44
2868 6427 0.321387 TCTGCACGTACTCTCTCCGT 60.321 55.000 0.00 0.00 34.71 4.69
2869 6428 0.375454 CTCTGCACGTACTCTCTCCG 59.625 60.000 0.00 0.00 0.00 4.63
2870 6429 1.668751 CTCTCTGCACGTACTCTCTCC 59.331 57.143 0.00 0.00 0.00 3.71
2871 6430 1.668751 CCTCTCTGCACGTACTCTCTC 59.331 57.143 0.00 0.00 0.00 3.20
2872 6431 1.745232 CCTCTCTGCACGTACTCTCT 58.255 55.000 0.00 0.00 0.00 3.10
2873 6432 0.099791 GCCTCTCTGCACGTACTCTC 59.900 60.000 0.00 0.00 0.00 3.20
2874 6433 1.649390 CGCCTCTCTGCACGTACTCT 61.649 60.000 0.00 0.00 0.00 3.24
2875 6434 1.226435 CGCCTCTCTGCACGTACTC 60.226 63.158 0.00 0.00 0.00 2.59
2876 6435 1.924320 GACGCCTCTCTGCACGTACT 61.924 60.000 0.00 0.00 39.16 2.73
2971 6531 0.906066 TTGCTGACGGTTATAGGCCA 59.094 50.000 5.01 0.00 0.00 5.36
2989 6549 3.659850 GCACTCGGCAAAGGTTTTT 57.340 47.368 0.00 0.00 43.97 1.94
2993 6556 2.983546 AGTGTAGCACTCGGCAAAGGT 61.984 52.381 0.00 0.00 41.21 3.50
3024 6587 1.750399 GAGAGGTGTACGCCGGGTA 60.750 63.158 19.53 0.39 0.00 3.69
3117 6680 4.580995 TGGAAGTCACTTTATTTTGCCGAA 59.419 37.500 0.00 0.00 0.00 4.30
3138 6701 1.296056 GATGGAACCAACCGACGTGG 61.296 60.000 0.00 3.10 46.41 4.94
3324 6891 0.341258 AGCAGGATCAGGGAGGAAGA 59.659 55.000 0.00 0.00 0.00 2.87
3328 6895 1.500474 TTGTAGCAGGATCAGGGAGG 58.500 55.000 0.00 0.00 0.00 4.30
3330 6898 4.591321 ATTTTTGTAGCAGGATCAGGGA 57.409 40.909 0.00 0.00 0.00 4.20
3388 6957 4.568152 ATGTGAGTTTGTTGTTAGGCAC 57.432 40.909 0.00 0.00 0.00 5.01
3430 6999 5.584649 TGTGATCTCAAAAGAAGTTCGTGTT 59.415 36.000 0.00 0.00 34.49 3.32
3590 7165 1.660167 AACGGCTTATCGGGTTTAGC 58.340 50.000 0.00 0.00 0.00 3.09
3704 7279 5.392767 ACTCGTTCAATAGCAGAGAGAAA 57.607 39.130 0.00 0.00 33.53 2.52
3776 7351 3.367646 TGTCCAGGAGTCTACGATTCT 57.632 47.619 0.00 0.00 0.00 2.40
3817 7392 6.753180 TCTCTATCATTGTAGATGAAGTGGC 58.247 40.000 0.00 0.00 30.75 5.01
3897 7476 5.102313 TGTAGTATGAGTGATGAACGCTTG 58.898 41.667 0.00 0.00 39.64 4.01
3949 7528 5.130975 TCATGTAGGTGCTGATATGGACTTT 59.869 40.000 0.00 0.00 0.00 2.66
4016 7595 2.821969 GGTTTCACGGACTACACCTCTA 59.178 50.000 0.00 0.00 0.00 2.43
4052 7632 1.931841 CTAGTAGTGCGACGTGCTCTA 59.068 52.381 13.83 13.83 45.16 2.43
4064 7644 7.315142 TGTGTATAACGTTTTCCCTAGTAGTG 58.685 38.462 5.91 0.00 0.00 2.74
4065 7645 7.394359 TCTGTGTATAACGTTTTCCCTAGTAGT 59.606 37.037 5.91 0.00 0.00 2.73
4066 7646 7.765307 TCTGTGTATAACGTTTTCCCTAGTAG 58.235 38.462 5.91 0.00 0.00 2.57
4067 7647 7.701539 TCTGTGTATAACGTTTTCCCTAGTA 57.298 36.000 5.91 0.00 0.00 1.82
4068 7648 6.594788 TCTGTGTATAACGTTTTCCCTAGT 57.405 37.500 5.91 0.00 0.00 2.57
4069 7649 7.095270 AGTTCTGTGTATAACGTTTTCCCTAG 58.905 38.462 5.91 0.00 0.00 3.02
4070 7650 6.996509 AGTTCTGTGTATAACGTTTTCCCTA 58.003 36.000 5.91 0.00 0.00 3.53
4071 7651 5.861727 AGTTCTGTGTATAACGTTTTCCCT 58.138 37.500 5.91 0.00 0.00 4.20
4072 7652 6.549912 AAGTTCTGTGTATAACGTTTTCCC 57.450 37.500 5.91 0.00 0.00 3.97
4073 7653 7.743400 GCTAAAGTTCTGTGTATAACGTTTTCC 59.257 37.037 5.91 0.00 31.36 3.13
4074 7654 8.277713 TGCTAAAGTTCTGTGTATAACGTTTTC 58.722 33.333 5.91 0.00 31.36 2.29
4075 7655 8.145316 TGCTAAAGTTCTGTGTATAACGTTTT 57.855 30.769 5.91 0.02 31.36 2.43
4076 7656 7.440255 ACTGCTAAAGTTCTGTGTATAACGTTT 59.560 33.333 5.91 0.00 34.57 3.60
4077 7657 6.927381 ACTGCTAAAGTTCTGTGTATAACGTT 59.073 34.615 5.88 5.88 34.57 3.99
4078 7658 6.453092 ACTGCTAAAGTTCTGTGTATAACGT 58.547 36.000 0.00 0.00 34.57 3.99
4079 7659 6.946229 ACTGCTAAAGTTCTGTGTATAACG 57.054 37.500 0.00 0.00 34.57 3.18
4080 7660 7.253684 CGCTACTGCTAAAGTTCTGTGTATAAC 60.254 40.741 0.00 0.00 40.56 1.89
4081 7661 6.750501 CGCTACTGCTAAAGTTCTGTGTATAA 59.249 38.462 0.00 0.00 40.56 0.98
4082 7662 6.263344 CGCTACTGCTAAAGTTCTGTGTATA 58.737 40.000 0.00 0.00 40.56 1.47
4083 7663 5.103000 CGCTACTGCTAAAGTTCTGTGTAT 58.897 41.667 0.00 0.00 40.56 2.29
4084 7664 4.482386 CGCTACTGCTAAAGTTCTGTGTA 58.518 43.478 0.00 0.00 40.56 2.90
4085 7665 3.318017 CGCTACTGCTAAAGTTCTGTGT 58.682 45.455 0.00 0.00 40.56 3.72
4086 7666 2.092838 GCGCTACTGCTAAAGTTCTGTG 59.907 50.000 0.00 0.00 40.56 3.66
4087 7667 2.028930 AGCGCTACTGCTAAAGTTCTGT 60.029 45.455 8.99 0.00 45.14 3.41
4088 7668 2.611518 AGCGCTACTGCTAAAGTTCTG 58.388 47.619 8.99 0.00 45.14 3.02
4089 7669 2.996621 CAAGCGCTACTGCTAAAGTTCT 59.003 45.455 12.05 0.00 46.60 3.01
4090 7670 2.737252 ACAAGCGCTACTGCTAAAGTTC 59.263 45.455 12.05 0.00 46.60 3.01
4091 7671 2.767505 ACAAGCGCTACTGCTAAAGTT 58.232 42.857 12.05 0.00 46.60 2.66
4092 7672 2.457366 ACAAGCGCTACTGCTAAAGT 57.543 45.000 12.05 0.00 46.60 2.66
4093 7673 4.921470 TTAACAAGCGCTACTGCTAAAG 57.079 40.909 12.05 0.00 46.60 1.85
4094 7674 5.467399 TCTTTTAACAAGCGCTACTGCTAAA 59.533 36.000 12.05 11.82 46.60 1.85
4095 7675 4.992319 TCTTTTAACAAGCGCTACTGCTAA 59.008 37.500 12.05 5.53 46.60 3.09
4096 7676 4.562082 TCTTTTAACAAGCGCTACTGCTA 58.438 39.130 12.05 0.00 46.60 3.49
4098 7678 3.737305 CTCTTTTAACAAGCGCTACTGC 58.263 45.455 12.05 0.00 0.00 4.40
4099 7679 3.186409 TGCTCTTTTAACAAGCGCTACTG 59.814 43.478 12.05 9.38 38.90 2.74
4100 7680 3.186613 GTGCTCTTTTAACAAGCGCTACT 59.813 43.478 12.05 0.00 41.97 2.57
4101 7681 3.479949 GTGCTCTTTTAACAAGCGCTAC 58.520 45.455 12.05 0.00 41.97 3.58
4102 7682 2.156891 CGTGCTCTTTTAACAAGCGCTA 59.843 45.455 12.05 0.00 42.80 4.26
4103 7683 1.069906 CGTGCTCTTTTAACAAGCGCT 60.070 47.619 2.64 2.64 42.80 5.92
4104 7684 1.318251 CGTGCTCTTTTAACAAGCGC 58.682 50.000 0.00 0.00 41.84 5.92
4105 7685 1.069906 AGCGTGCTCTTTTAACAAGCG 60.070 47.619 0.00 0.00 42.49 4.68
4106 7686 2.688364 AGCGTGCTCTTTTAACAAGC 57.312 45.000 0.00 0.00 38.79 4.01
4107 7687 4.992381 AGTAGCGTGCTCTTTTAACAAG 57.008 40.909 0.00 0.00 0.00 3.16
4108 7688 5.535333 AGTAGTAGCGTGCTCTTTTAACAA 58.465 37.500 0.00 0.00 0.00 2.83
4109 7689 5.130292 AGTAGTAGCGTGCTCTTTTAACA 57.870 39.130 0.00 0.00 0.00 2.41
4110 7690 6.549952 TCTAGTAGTAGCGTGCTCTTTTAAC 58.450 40.000 0.00 0.00 0.00 2.01
4111 7691 6.748333 TCTAGTAGTAGCGTGCTCTTTTAA 57.252 37.500 0.00 0.00 0.00 1.52
4112 7692 6.939132 ATCTAGTAGTAGCGTGCTCTTTTA 57.061 37.500 0.00 0.00 0.00 1.52
4113 7693 5.838531 ATCTAGTAGTAGCGTGCTCTTTT 57.161 39.130 0.00 0.00 0.00 2.27
4114 7694 5.049267 GCTATCTAGTAGTAGCGTGCTCTTT 60.049 44.000 12.81 0.00 34.60 2.52
4115 7695 4.453136 GCTATCTAGTAGTAGCGTGCTCTT 59.547 45.833 12.81 0.00 34.60 2.85
4116 7696 3.998341 GCTATCTAGTAGTAGCGTGCTCT 59.002 47.826 12.81 0.00 34.60 4.09
4117 7697 3.747010 TGCTATCTAGTAGTAGCGTGCTC 59.253 47.826 18.61 0.00 44.81 4.26
4118 7698 3.741249 TGCTATCTAGTAGTAGCGTGCT 58.259 45.455 18.61 0.00 44.81 4.40
4119 7699 3.499157 ACTGCTATCTAGTAGTAGCGTGC 59.501 47.826 18.61 4.60 45.44 5.34
4125 7705 3.925299 CGCGCTACTGCTATCTAGTAGTA 59.075 47.826 5.56 12.64 45.44 1.82
4127 7707 2.737783 ACGCGCTACTGCTATCTAGTAG 59.262 50.000 5.73 7.60 46.57 2.57
4128 7708 2.479275 CACGCGCTACTGCTATCTAGTA 59.521 50.000 5.73 0.00 36.97 1.82
4129 7709 1.264557 CACGCGCTACTGCTATCTAGT 59.735 52.381 5.73 0.00 36.97 2.57
4130 7710 1.957089 CACGCGCTACTGCTATCTAG 58.043 55.000 5.73 0.00 36.97 2.43
4131 7711 0.040336 GCACGCGCTACTGCTATCTA 60.040 55.000 5.73 0.00 36.97 1.98
4132 7712 1.299468 GCACGCGCTACTGCTATCT 60.299 57.895 5.73 0.00 36.97 1.98
4133 7713 1.145759 TTGCACGCGCTACTGCTATC 61.146 55.000 18.50 0.00 39.64 2.08
4134 7714 0.739462 TTTGCACGCGCTACTGCTAT 60.739 50.000 18.50 0.00 39.64 2.97
4135 7715 0.946700 TTTTGCACGCGCTACTGCTA 60.947 50.000 18.50 9.80 39.64 3.49
4136 7716 1.577328 ATTTTGCACGCGCTACTGCT 61.577 50.000 18.50 0.00 39.64 4.24
4137 7717 0.096281 TATTTTGCACGCGCTACTGC 59.904 50.000 5.73 9.63 39.64 4.40
4138 7718 2.430956 CTTATTTTGCACGCGCTACTG 58.569 47.619 5.73 0.00 39.64 2.74
4139 7719 1.202031 GCTTATTTTGCACGCGCTACT 60.202 47.619 5.73 0.00 39.64 2.57
4140 7720 1.180166 GCTTATTTTGCACGCGCTAC 58.820 50.000 5.73 0.00 39.64 3.58
4141 7721 0.247497 CGCTTATTTTGCACGCGCTA 60.247 50.000 5.73 0.00 39.64 4.26
4142 7722 1.511887 CGCTTATTTTGCACGCGCT 60.512 52.632 5.73 0.00 39.64 5.92
4143 7723 2.979036 CGCTTATTTTGCACGCGC 59.021 55.556 5.73 0.00 37.29 6.86
4144 7724 2.979036 GCGCTTATTTTGCACGCG 59.021 55.556 3.53 3.53 45.88 6.01
4145 7725 2.979036 CGCGCTTATTTTGCACGC 59.021 55.556 5.56 5.62 45.72 5.34
4146 7726 1.511887 AGCGCGCTTATTTTGCACG 60.512 52.632 31.32 0.00 38.74 5.34
4147 7727 1.983160 CAGCGCGCTTATTTTGCAC 59.017 52.632 34.58 0.00 0.00 4.57
4148 7728 1.801113 GCAGCGCGCTTATTTTGCA 60.801 52.632 34.58 0.00 37.77 4.08
4149 7729 1.736249 CTGCAGCGCGCTTATTTTGC 61.736 55.000 34.58 30.33 43.06 3.68
4150 7730 0.179192 TCTGCAGCGCGCTTATTTTG 60.179 50.000 34.58 21.44 43.06 2.44
4151 7731 0.734889 ATCTGCAGCGCGCTTATTTT 59.265 45.000 34.58 14.10 43.06 1.82
4152 7732 0.028505 CATCTGCAGCGCGCTTATTT 59.971 50.000 34.58 12.88 43.06 1.40
4153 7733 1.645455 CATCTGCAGCGCGCTTATT 59.355 52.632 34.58 8.14 43.06 1.40
4154 7734 2.249535 CCATCTGCAGCGCGCTTAT 61.250 57.895 34.58 19.35 43.06 1.73
4155 7735 2.891936 CCATCTGCAGCGCGCTTA 60.892 61.111 34.58 22.48 43.06 3.09
4156 7736 4.765449 TCCATCTGCAGCGCGCTT 62.765 61.111 34.58 14.87 43.06 4.68
4159 7739 0.947660 ATATGTCCATCTGCAGCGCG 60.948 55.000 9.47 0.00 0.00 6.86
4160 7740 2.084610 TATATGTCCATCTGCAGCGC 57.915 50.000 9.47 0.00 0.00 5.92
4161 7741 3.853475 TGATATATGTCCATCTGCAGCG 58.147 45.455 9.47 1.99 0.00 5.18
4162 7742 4.829968 ACTGATATATGTCCATCTGCAGC 58.170 43.478 9.47 0.00 0.00 5.25
4163 7743 6.041511 GCTACTGATATATGTCCATCTGCAG 58.958 44.000 7.63 7.63 0.00 4.41
4164 7744 5.393461 CGCTACTGATATATGTCCATCTGCA 60.393 44.000 0.00 0.00 0.00 4.41
4165 7745 5.039984 CGCTACTGATATATGTCCATCTGC 58.960 45.833 0.00 0.00 0.00 4.26
4166 7746 5.039984 GCGCTACTGATATATGTCCATCTG 58.960 45.833 0.00 0.00 0.00 2.90
4167 7747 4.201960 CGCGCTACTGATATATGTCCATCT 60.202 45.833 5.56 0.00 0.00 2.90
4168 7748 4.038361 CGCGCTACTGATATATGTCCATC 58.962 47.826 5.56 0.00 0.00 3.51
4169 7749 3.444034 ACGCGCTACTGATATATGTCCAT 59.556 43.478 5.73 0.00 0.00 3.41
4170 7750 2.817844 ACGCGCTACTGATATATGTCCA 59.182 45.455 5.73 0.00 0.00 4.02
4171 7751 3.127203 AGACGCGCTACTGATATATGTCC 59.873 47.826 5.73 0.00 0.00 4.02
4172 7752 4.142881 TGAGACGCGCTACTGATATATGTC 60.143 45.833 5.73 0.19 0.00 3.06
4173 7753 3.751698 TGAGACGCGCTACTGATATATGT 59.248 43.478 5.73 0.00 0.00 2.29
4174 7754 4.342352 TGAGACGCGCTACTGATATATG 57.658 45.455 5.73 0.00 0.00 1.78
4175 7755 4.260415 CGATGAGACGCGCTACTGATATAT 60.260 45.833 5.73 0.00 0.00 0.86
4176 7756 3.062234 CGATGAGACGCGCTACTGATATA 59.938 47.826 5.73 0.00 0.00 0.86
4177 7757 2.159639 CGATGAGACGCGCTACTGATAT 60.160 50.000 5.73 0.00 0.00 1.63
4178 7758 1.194772 CGATGAGACGCGCTACTGATA 59.805 52.381 5.73 0.00 0.00 2.15
4179 7759 0.040870 CGATGAGACGCGCTACTGAT 60.041 55.000 5.73 2.77 0.00 2.90
4180 7760 1.087771 TCGATGAGACGCGCTACTGA 61.088 55.000 5.73 0.00 0.00 3.41
4181 7761 0.248094 TTCGATGAGACGCGCTACTG 60.248 55.000 5.73 0.00 0.00 2.74
4182 7762 0.450583 TTTCGATGAGACGCGCTACT 59.549 50.000 5.73 2.82 0.00 2.57
4183 7763 1.007319 GTTTTCGATGAGACGCGCTAC 60.007 52.381 5.73 0.00 0.00 3.58
4184 7764 1.135489 AGTTTTCGATGAGACGCGCTA 60.135 47.619 5.73 0.00 0.00 4.26
4185 7765 0.388649 AGTTTTCGATGAGACGCGCT 60.389 50.000 5.73 3.91 0.00 5.92
4186 7766 0.023858 GAGTTTTCGATGAGACGCGC 59.976 55.000 5.73 0.00 0.00 6.86
4198 7778 8.248117 TGGAATTTTAGTAGTAGCGAGTTTTC 57.752 34.615 0.00 0.00 0.00 2.29
4199 7779 8.611654 TTGGAATTTTAGTAGTAGCGAGTTTT 57.388 30.769 0.00 0.00 0.00 2.43
4200 7780 8.788325 ATTGGAATTTTAGTAGTAGCGAGTTT 57.212 30.769 0.00 0.00 0.00 2.66
4201 7781 8.038944 TGATTGGAATTTTAGTAGTAGCGAGTT 58.961 33.333 0.00 0.00 0.00 3.01
4202 7782 7.491696 GTGATTGGAATTTTAGTAGTAGCGAGT 59.508 37.037 0.00 0.00 0.00 4.18
4203 7783 7.707035 AGTGATTGGAATTTTAGTAGTAGCGAG 59.293 37.037 0.00 0.00 0.00 5.03
4204 7784 7.553334 AGTGATTGGAATTTTAGTAGTAGCGA 58.447 34.615 0.00 0.00 0.00 4.93
4205 7785 7.772332 AGTGATTGGAATTTTAGTAGTAGCG 57.228 36.000 0.00 0.00 0.00 4.26
4209 7789 9.367444 CGTCTAAGTGATTGGAATTTTAGTAGT 57.633 33.333 0.00 0.00 0.00 2.73
4210 7790 9.582431 TCGTCTAAGTGATTGGAATTTTAGTAG 57.418 33.333 0.00 0.00 0.00 2.57
4212 7792 8.883731 CATCGTCTAAGTGATTGGAATTTTAGT 58.116 33.333 0.00 0.00 0.00 2.24
4213 7793 8.338259 CCATCGTCTAAGTGATTGGAATTTTAG 58.662 37.037 0.00 0.00 0.00 1.85
4214 7794 7.282224 CCCATCGTCTAAGTGATTGGAATTTTA 59.718 37.037 0.00 0.00 30.85 1.52
4215 7795 6.095440 CCCATCGTCTAAGTGATTGGAATTTT 59.905 38.462 0.00 0.00 30.85 1.82
4216 7796 5.590259 CCCATCGTCTAAGTGATTGGAATTT 59.410 40.000 0.00 0.00 30.85 1.82
4217 7797 5.126067 CCCATCGTCTAAGTGATTGGAATT 58.874 41.667 0.00 0.00 30.85 2.17
4218 7798 4.708177 CCCATCGTCTAAGTGATTGGAAT 58.292 43.478 0.00 0.00 30.85 3.01
4219 7799 3.681594 GCCCATCGTCTAAGTGATTGGAA 60.682 47.826 0.00 0.00 30.85 3.53
4220 7800 2.158957 GCCCATCGTCTAAGTGATTGGA 60.159 50.000 0.00 0.00 30.85 3.53
4221 7801 2.158900 AGCCCATCGTCTAAGTGATTGG 60.159 50.000 0.00 0.00 32.11 3.16
4222 7802 3.185246 AGCCCATCGTCTAAGTGATTG 57.815 47.619 0.00 0.00 0.00 2.67
4223 7803 3.704566 TGTAGCCCATCGTCTAAGTGATT 59.295 43.478 0.00 0.00 0.00 2.57
4224 7804 3.068307 GTGTAGCCCATCGTCTAAGTGAT 59.932 47.826 0.00 0.00 0.00 3.06
4225 7805 2.426024 GTGTAGCCCATCGTCTAAGTGA 59.574 50.000 0.00 0.00 0.00 3.41
4226 7806 2.165641 TGTGTAGCCCATCGTCTAAGTG 59.834 50.000 0.00 0.00 0.00 3.16
4227 7807 2.453521 TGTGTAGCCCATCGTCTAAGT 58.546 47.619 0.00 0.00 0.00 2.24
4228 7808 3.735237 ATGTGTAGCCCATCGTCTAAG 57.265 47.619 0.00 0.00 0.00 2.18
4229 7809 4.212716 ACTATGTGTAGCCCATCGTCTAA 58.787 43.478 0.00 0.00 0.00 2.10
4230 7810 3.828921 ACTATGTGTAGCCCATCGTCTA 58.171 45.455 0.00 0.00 0.00 2.59
4231 7811 2.667470 ACTATGTGTAGCCCATCGTCT 58.333 47.619 0.00 0.00 0.00 4.18
4232 7812 4.162096 CTACTATGTGTAGCCCATCGTC 57.838 50.000 0.00 0.00 41.68 4.20
4242 7822 6.293698 TGGAAGATCGCTACTACTATGTGTA 58.706 40.000 0.00 0.00 0.00 2.90
4243 7823 5.131067 TGGAAGATCGCTACTACTATGTGT 58.869 41.667 0.00 0.00 0.00 3.72
4244 7824 5.690997 TGGAAGATCGCTACTACTATGTG 57.309 43.478 0.00 0.00 0.00 3.21
4245 7825 6.710597 TTTGGAAGATCGCTACTACTATGT 57.289 37.500 0.00 0.00 0.00 2.29
4246 7826 7.042658 GGTTTTTGGAAGATCGCTACTACTATG 60.043 40.741 0.00 0.00 0.00 2.23
4247 7827 6.985059 GGTTTTTGGAAGATCGCTACTACTAT 59.015 38.462 0.00 0.00 0.00 2.12
4248 7828 6.335777 GGTTTTTGGAAGATCGCTACTACTA 58.664 40.000 0.00 0.00 0.00 1.82
4249 7829 5.176592 GGTTTTTGGAAGATCGCTACTACT 58.823 41.667 0.00 0.00 0.00 2.57
4250 7830 4.032558 CGGTTTTTGGAAGATCGCTACTAC 59.967 45.833 0.00 0.00 0.00 2.73
4251 7831 4.178540 CGGTTTTTGGAAGATCGCTACTA 58.821 43.478 0.00 0.00 0.00 1.82
4252 7832 3.000727 CGGTTTTTGGAAGATCGCTACT 58.999 45.455 0.00 0.00 0.00 2.57
4253 7833 2.475685 GCGGTTTTTGGAAGATCGCTAC 60.476 50.000 2.15 0.00 38.82 3.58
4254 7834 1.735571 GCGGTTTTTGGAAGATCGCTA 59.264 47.619 2.15 0.00 38.82 4.26
4255 7835 0.521735 GCGGTTTTTGGAAGATCGCT 59.478 50.000 2.15 0.00 38.82 4.93
4256 7836 0.793104 CGCGGTTTTTGGAAGATCGC 60.793 55.000 0.00 0.00 38.56 4.58
4257 7837 0.793104 GCGCGGTTTTTGGAAGATCG 60.793 55.000 8.83 0.00 0.00 3.69
4258 7838 0.521735 AGCGCGGTTTTTGGAAGATC 59.478 50.000 4.23 0.00 0.00 2.75
4259 7839 1.467342 GTAGCGCGGTTTTTGGAAGAT 59.533 47.619 19.09 0.00 0.00 2.40
4260 7840 0.869730 GTAGCGCGGTTTTTGGAAGA 59.130 50.000 19.09 0.00 0.00 2.87
4261 7841 0.109919 GGTAGCGCGGTTTTTGGAAG 60.110 55.000 19.09 0.00 0.00 3.46
4262 7842 1.843734 CGGTAGCGCGGTTTTTGGAA 61.844 55.000 19.09 0.00 0.00 3.53
4263 7843 2.319096 CGGTAGCGCGGTTTTTGGA 61.319 57.895 19.09 0.00 0.00 3.53
4264 7844 2.174835 CGGTAGCGCGGTTTTTGG 59.825 61.111 19.09 0.00 0.00 3.28
4265 7845 2.501008 GCGGTAGCGCGGTTTTTG 60.501 61.111 24.65 5.60 0.00 2.44
4275 7855 6.183360 GCTGCTATAAGTTTATTAGCGGTAGC 60.183 42.308 16.23 11.56 40.99 3.58
4276 7856 6.033619 CGCTGCTATAAGTTTATTAGCGGTAG 59.966 42.308 19.08 10.55 39.87 3.18
4277 7857 5.860182 CGCTGCTATAAGTTTATTAGCGGTA 59.140 40.000 19.08 0.00 39.87 4.02
4278 7858 4.684703 CGCTGCTATAAGTTTATTAGCGGT 59.315 41.667 19.08 0.00 39.87 5.68
4279 7859 4.434330 GCGCTGCTATAAGTTTATTAGCGG 60.434 45.833 23.37 18.23 41.57 5.52
4280 7860 4.629065 GCGCTGCTATAAGTTTATTAGCG 58.371 43.478 20.79 20.79 42.68 4.26
4281 7861 4.150098 ACGCGCTGCTATAAGTTTATTAGC 59.850 41.667 5.73 0.00 0.00 3.09
4282 7862 5.824243 ACGCGCTGCTATAAGTTTATTAG 57.176 39.130 5.73 0.00 0.00 1.73
4283 7863 6.592798 AAACGCGCTGCTATAAGTTTATTA 57.407 33.333 5.73 0.00 31.14 0.98
4284 7864 5.479716 AAACGCGCTGCTATAAGTTTATT 57.520 34.783 5.73 0.00 31.14 1.40
4285 7865 6.202188 ACATAAACGCGCTGCTATAAGTTTAT 59.798 34.615 5.73 15.46 42.13 1.40
4286 7866 5.521010 ACATAAACGCGCTGCTATAAGTTTA 59.479 36.000 5.73 10.40 38.08 2.01
4287 7867 4.331717 ACATAAACGCGCTGCTATAAGTTT 59.668 37.500 5.73 8.38 36.11 2.66
4288 7868 3.869246 ACATAAACGCGCTGCTATAAGTT 59.131 39.130 5.73 0.00 0.00 2.66
4289 7869 3.454375 ACATAAACGCGCTGCTATAAGT 58.546 40.909 5.73 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.