Multiple sequence alignment - TraesCS5A01G333000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G333000 chr5A 100.000 2415 0 0 1 2415 541944988 541947402 0.000000e+00 4460.0
1 TraesCS5A01G333000 chr5A 92.453 212 16 0 2189 2400 379040087 379039876 1.260000e-78 303.0
2 TraesCS5A01G333000 chr5A 90.708 226 21 0 2190 2415 16652334 16652109 4.520000e-78 302.0
3 TraesCS5A01G333000 chr5A 74.505 455 85 22 1109 1540 542063104 542063550 4.790000e-38 169.0
4 TraesCS5A01G333000 chr5A 100.000 69 0 0 2726 2794 541947713 541947781 8.120000e-26 128.0
5 TraesCS5A01G333000 chr5A 77.297 185 29 10 1479 1663 542001831 542001660 2.290000e-16 97.1
6 TraesCS5A01G333000 chr5A 97.368 38 1 0 950 987 542062923 542062960 6.460000e-07 65.8
7 TraesCS5A01G333000 chr5A 97.143 35 1 0 1108 1142 542002082 542002048 3.010000e-05 60.2
8 TraesCS5A01G333000 chr5B 94.823 1043 39 7 691 1726 517203398 517204432 0.000000e+00 1613.0
9 TraesCS5A01G333000 chr5B 87.906 339 22 7 67 402 517202590 517202912 5.650000e-102 381.0
10 TraesCS5A01G333000 chr5B 85.845 219 23 5 402 617 517203172 517203385 2.800000e-55 226.0
11 TraesCS5A01G333000 chr5B 82.251 231 14 12 1764 1971 517204727 517204953 1.030000e-39 174.0
12 TraesCS5A01G333000 chr5B 88.785 107 12 0 1431 1537 517216101 517216207 6.280000e-27 132.0
13 TraesCS5A01G333000 chr5B 97.260 73 2 0 1 73 517202489 517202561 1.050000e-24 124.0
14 TraesCS5A01G333000 chr5B 82.014 139 25 0 1109 1247 517215785 517215923 4.890000e-23 119.0
15 TraesCS5A01G333000 chr5B 92.754 69 3 2 2726 2794 564621263 564621197 6.370000e-17 99.0
16 TraesCS5A01G333000 chr5B 80.851 94 12 2 904 997 517215560 517215647 4.990000e-08 69.4
17 TraesCS5A01G333000 chr3D 92.920 226 16 0 2190 2415 1662284 1662059 2.070000e-86 329.0
18 TraesCS5A01G333000 chr3D 92.754 69 5 0 2726 2794 300177880 300177812 1.770000e-17 100.0
19 TraesCS5A01G333000 chr3B 92.035 226 18 0 2190 2415 3809371 3809146 4.490000e-83 318.0
20 TraesCS5A01G333000 chr3B 91.150 226 20 0 2190 2415 4707853 4707628 9.720000e-80 307.0
21 TraesCS5A01G333000 chr6D 91.150 226 20 0 2190 2415 336525057 336525282 9.720000e-80 307.0
22 TraesCS5A01G333000 chr6D 92.754 69 5 0 2726 2794 438816295 438816363 1.770000e-17 100.0
23 TraesCS5A01G333000 chr2A 90.086 232 21 2 2185 2415 507716243 507716013 1.630000e-77 300.0
24 TraesCS5A01G333000 chr2A 89.823 226 23 0 2190 2415 55099975 55100200 9.790000e-75 291.0
25 TraesCS5A01G333000 chr6B 89.868 227 23 0 2189 2415 46005656 46005882 2.720000e-75 292.0
26 TraesCS5A01G333000 chr7D 94.203 69 4 0 2726 2794 59932712 59932644 3.810000e-19 106.0
27 TraesCS5A01G333000 chr5D 86.139 101 11 2 1479 1579 427544529 427544432 3.810000e-19 106.0
28 TraesCS5A01G333000 chr5D 100.000 35 0 0 1108 1142 427544774 427544740 6.460000e-07 65.8
29 TraesCS5A01G333000 chr4D 94.203 69 4 0 2726 2794 73323677 73323609 3.810000e-19 106.0
30 TraesCS5A01G333000 chr2D 94.203 69 4 0 2726 2794 533785559 533785627 3.810000e-19 106.0
31 TraesCS5A01G333000 chr2D 92.754 69 5 0 2726 2794 642264774 642264706 1.770000e-17 100.0
32 TraesCS5A01G333000 chr1D 92.754 69 5 0 2726 2794 20924891 20924823 1.770000e-17 100.0
33 TraesCS5A01G333000 chr1B 92.754 69 3 1 2726 2794 418057320 418057386 6.370000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G333000 chr5A 541944988 541947781 2793 False 2294.0 4460 100.000 1 2794 2 chr5A.!!$F1 2793
1 TraesCS5A01G333000 chr5B 517202489 517204953 2464 False 503.6 1613 89.617 1 1971 5 chr5B.!!$F1 1970

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
265 302 0.035343 CCTTCGTTCCTTCCTTCCCC 60.035 60.0 0.0 0.0 0.0 4.81 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2063 2659 0.040499 GAGGTGACAGGAGGAGAGGT 59.96 60.0 0.0 0.0 0.0 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 3.572604 AAGGACGGAAAGAAGACGTAG 57.427 47.619 0.00 0.00 41.40 3.51
83 119 2.410262 CGTTGAGCTTGACGATTGTGTC 60.410 50.000 15.23 0.00 41.53 3.67
121 157 4.658071 AGAACAAACACACAAAGCTTACG 58.342 39.130 0.00 0.00 0.00 3.18
167 203 0.523072 CGTGCAATTCCTTGTGGGAG 59.477 55.000 0.00 0.00 46.01 4.30
171 208 1.004745 GCAATTCCTTGTGGGAGAGGA 59.995 52.381 0.00 0.00 46.01 3.71
185 222 6.841755 TGTGGGAGAGGAAAAGGAAATTAAAA 59.158 34.615 0.00 0.00 0.00 1.52
192 229 9.987272 AGAGGAAAAGGAAATTAAAACTGATTG 57.013 29.630 0.00 0.00 0.00 2.67
195 232 8.498358 GGAAAAGGAAATTAAAACTGATTGCTG 58.502 33.333 0.00 0.00 0.00 4.41
196 233 9.260002 GAAAAGGAAATTAAAACTGATTGCTGA 57.740 29.630 0.00 0.00 0.00 4.26
209 246 5.213891 TGATTGCTGATTATAGCGGAAGA 57.786 39.130 0.00 0.00 46.61 2.87
210 247 4.991056 TGATTGCTGATTATAGCGGAAGAC 59.009 41.667 0.00 0.00 46.61 3.01
251 288 3.251571 CCGTCTACTTTTCCTTCCTTCG 58.748 50.000 0.00 0.00 0.00 3.79
252 289 3.305881 CCGTCTACTTTTCCTTCCTTCGT 60.306 47.826 0.00 0.00 0.00 3.85
253 290 4.304939 CGTCTACTTTTCCTTCCTTCGTT 58.695 43.478 0.00 0.00 0.00 3.85
254 291 4.385146 CGTCTACTTTTCCTTCCTTCGTTC 59.615 45.833 0.00 0.00 0.00 3.95
265 302 0.035343 CCTTCGTTCCTTCCTTCCCC 60.035 60.000 0.00 0.00 0.00 4.81
280 317 3.632080 CCCGGCCACACCACACTA 61.632 66.667 2.24 0.00 39.03 2.74
296 333 5.104900 ACCACACTAAAATACTCCCTAGCAG 60.105 44.000 0.00 0.00 0.00 4.24
300 337 5.468072 CACTAAAATACTCCCTAGCAGCATG 59.532 44.000 0.00 0.00 40.87 4.06
311 348 2.791383 AGCAGCATGTCTCTCGTATC 57.209 50.000 0.00 0.00 39.31 2.24
312 349 1.339610 AGCAGCATGTCTCTCGTATCC 59.660 52.381 0.00 0.00 39.31 2.59
315 352 2.620585 CAGCATGTCTCTCGTATCCTCA 59.379 50.000 0.00 0.00 0.00 3.86
320 357 5.525378 GCATGTCTCTCGTATCCTCAAAAAT 59.475 40.000 0.00 0.00 0.00 1.82
322 359 7.224753 GCATGTCTCTCGTATCCTCAAAAATAA 59.775 37.037 0.00 0.00 0.00 1.40
324 361 8.703604 TGTCTCTCGTATCCTCAAAAATAAAG 57.296 34.615 0.00 0.00 0.00 1.85
326 363 9.367444 GTCTCTCGTATCCTCAAAAATAAAGAA 57.633 33.333 0.00 0.00 0.00 2.52
327 364 9.587772 TCTCTCGTATCCTCAAAAATAAAGAAG 57.412 33.333 0.00 0.00 0.00 2.85
358 395 1.482278 GTATCTCTCGCGGCTTCTTG 58.518 55.000 6.13 0.00 0.00 3.02
359 396 0.385751 TATCTCTCGCGGCTTCTTGG 59.614 55.000 6.13 0.00 0.00 3.61
360 397 1.608717 ATCTCTCGCGGCTTCTTGGT 61.609 55.000 6.13 0.00 0.00 3.67
361 398 2.048222 TCTCGCGGCTTCTTGGTG 60.048 61.111 6.13 0.00 0.00 4.17
362 399 2.357517 CTCGCGGCTTCTTGGTGT 60.358 61.111 6.13 0.00 0.00 4.16
363 400 1.961277 CTCGCGGCTTCTTGGTGTT 60.961 57.895 6.13 0.00 0.00 3.32
364 401 2.175184 CTCGCGGCTTCTTGGTGTTG 62.175 60.000 6.13 0.00 0.00 3.33
372 409 2.031682 GCTTCTTGGTGTTGCTGTACTG 60.032 50.000 0.00 0.00 0.00 2.74
452 749 6.070995 TGACTTGTACCGTCATTTTATCCTCT 60.071 38.462 10.11 0.00 36.54 3.69
467 764 4.516652 ATCCTCTTGGCTTCTTTGCTAT 57.483 40.909 0.00 0.00 0.00 2.97
471 768 4.433615 CTCTTGGCTTCTTTGCTATACGA 58.566 43.478 0.00 0.00 0.00 3.43
472 769 5.023533 TCTTGGCTTCTTTGCTATACGAT 57.976 39.130 0.00 0.00 0.00 3.73
473 770 4.811024 TCTTGGCTTCTTTGCTATACGATG 59.189 41.667 0.00 0.00 0.00 3.84
481 778 6.947644 TCTTTGCTATACGATGTACACCTA 57.052 37.500 0.00 0.00 0.00 3.08
486 783 4.916249 GCTATACGATGTACACCTACAAGC 59.084 45.833 0.00 0.28 36.43 4.01
496 793 0.817634 ACCTACAAGCTTGCACGCAA 60.818 50.000 26.27 4.12 0.00 4.85
521 820 7.210813 GCGTACTGCATACTATATGAATGAC 57.789 40.000 0.00 0.00 45.45 3.06
532 831 9.799106 ATACTATATGAATGACCCCTCAAAAAG 57.201 33.333 0.00 0.00 0.00 2.27
533 832 5.859205 ATATGAATGACCCCTCAAAAAGC 57.141 39.130 0.00 0.00 0.00 3.51
535 834 2.892852 TGAATGACCCCTCAAAAAGCAG 59.107 45.455 0.00 0.00 0.00 4.24
552 851 3.354467 AGCAGTACCACCTCTGTACTAC 58.646 50.000 3.02 0.00 45.34 2.73
555 854 4.021719 GCAGTACCACCTCTGTACTACAAA 60.022 45.833 3.02 0.00 45.34 2.83
557 856 5.924825 CAGTACCACCTCTGTACTACAAAAC 59.075 44.000 3.02 0.00 45.34 2.43
563 862 6.189567 CACCTCTGTACTACAAAACAAAACG 58.810 40.000 0.00 0.00 0.00 3.60
615 914 8.851541 AACGTCTTATATTTTGTTACCAAGGA 57.148 30.769 0.00 0.00 0.00 3.36
616 915 8.488651 ACGTCTTATATTTTGTTACCAAGGAG 57.511 34.615 0.00 0.00 0.00 3.69
617 916 7.065443 ACGTCTTATATTTTGTTACCAAGGAGC 59.935 37.037 0.00 0.00 0.00 4.70
618 917 7.065324 CGTCTTATATTTTGTTACCAAGGAGCA 59.935 37.037 0.00 0.00 0.00 4.26
619 918 8.903820 GTCTTATATTTTGTTACCAAGGAGCAT 58.096 33.333 0.00 0.00 0.00 3.79
620 919 8.902806 TCTTATATTTTGTTACCAAGGAGCATG 58.097 33.333 0.00 0.00 0.00 4.06
621 920 8.815565 TTATATTTTGTTACCAAGGAGCATGA 57.184 30.769 0.00 0.00 0.00 3.07
622 921 4.846779 TTTTGTTACCAAGGAGCATGAC 57.153 40.909 0.00 0.00 0.00 3.06
623 922 3.500448 TTGTTACCAAGGAGCATGACA 57.500 42.857 0.00 0.00 0.00 3.58
624 923 3.057969 TGTTACCAAGGAGCATGACAG 57.942 47.619 0.00 0.00 0.00 3.51
625 924 2.637382 TGTTACCAAGGAGCATGACAGA 59.363 45.455 0.00 0.00 0.00 3.41
626 925 3.003480 GTTACCAAGGAGCATGACAGAC 58.997 50.000 0.00 0.00 0.00 3.51
628 927 1.002888 ACCAAGGAGCATGACAGACTG 59.997 52.381 0.00 0.00 0.00 3.51
629 928 1.277273 CCAAGGAGCATGACAGACTGA 59.723 52.381 10.08 0.00 0.00 3.41
630 929 2.093075 CCAAGGAGCATGACAGACTGAT 60.093 50.000 10.08 0.00 0.00 2.90
631 930 3.133542 CCAAGGAGCATGACAGACTGATA 59.866 47.826 10.08 0.00 0.00 2.15
632 931 4.118410 CAAGGAGCATGACAGACTGATAC 58.882 47.826 10.08 1.03 0.00 2.24
633 932 2.360483 AGGAGCATGACAGACTGATACG 59.640 50.000 10.08 0.00 0.00 3.06
634 933 2.359214 GGAGCATGACAGACTGATACGA 59.641 50.000 10.08 0.00 0.00 3.43
635 934 3.181486 GGAGCATGACAGACTGATACGAA 60.181 47.826 10.08 0.00 0.00 3.85
636 935 4.500545 GGAGCATGACAGACTGATACGAAT 60.501 45.833 10.08 0.00 0.00 3.34
637 936 5.016051 AGCATGACAGACTGATACGAATT 57.984 39.130 10.08 0.00 0.00 2.17
638 937 5.423015 AGCATGACAGACTGATACGAATTT 58.577 37.500 10.08 0.00 0.00 1.82
639 938 5.877012 AGCATGACAGACTGATACGAATTTT 59.123 36.000 10.08 0.00 0.00 1.82
640 939 6.372659 AGCATGACAGACTGATACGAATTTTT 59.627 34.615 10.08 0.00 0.00 1.94
665 964 8.627487 TTTTTAAGGCGATACAAGCATATTTG 57.373 30.769 0.00 0.00 36.08 2.32
666 965 6.935741 TTAAGGCGATACAAGCATATTTGT 57.064 33.333 0.00 0.00 43.34 2.83
667 966 5.835113 AAGGCGATACAAGCATATTTGTT 57.165 34.783 0.00 0.00 41.31 2.83
668 967 5.424121 AGGCGATACAAGCATATTTGTTC 57.576 39.130 0.00 0.00 41.31 3.18
669 968 4.275936 AGGCGATACAAGCATATTTGTTCC 59.724 41.667 0.00 0.00 41.31 3.62
670 969 4.275936 GGCGATACAAGCATATTTGTTCCT 59.724 41.667 0.00 0.00 41.31 3.36
671 970 5.207768 GCGATACAAGCATATTTGTTCCTG 58.792 41.667 0.00 0.00 41.31 3.86
672 971 5.007626 GCGATACAAGCATATTTGTTCCTGA 59.992 40.000 0.00 0.00 41.31 3.86
673 972 6.458206 GCGATACAAGCATATTTGTTCCTGAA 60.458 38.462 0.00 0.00 41.31 3.02
674 973 6.907212 CGATACAAGCATATTTGTTCCTGAAC 59.093 38.462 3.07 3.07 41.31 3.18
675 974 5.391312 ACAAGCATATTTGTTCCTGAACC 57.609 39.130 7.51 0.00 38.05 3.62
676 975 4.832266 ACAAGCATATTTGTTCCTGAACCA 59.168 37.500 7.51 0.00 38.05 3.67
677 976 5.481473 ACAAGCATATTTGTTCCTGAACCAT 59.519 36.000 7.51 3.03 38.05 3.55
678 977 6.014327 ACAAGCATATTTGTTCCTGAACCATT 60.014 34.615 7.51 0.00 38.05 3.16
679 978 6.610075 AGCATATTTGTTCCTGAACCATTT 57.390 33.333 7.51 0.00 40.46 2.32
680 979 7.008021 AGCATATTTGTTCCTGAACCATTTT 57.992 32.000 7.51 0.00 40.46 1.82
681 980 8.133024 AGCATATTTGTTCCTGAACCATTTTA 57.867 30.769 7.51 0.00 40.46 1.52
682 981 8.253113 AGCATATTTGTTCCTGAACCATTTTAG 58.747 33.333 7.51 0.00 40.46 1.85
683 982 7.492344 GCATATTTGTTCCTGAACCATTTTAGG 59.508 37.037 7.51 0.00 39.42 2.69
684 983 8.748412 CATATTTGTTCCTGAACCATTTTAGGA 58.252 33.333 7.51 0.00 43.96 2.94
685 984 7.797121 ATTTGTTCCTGAACCATTTTAGGAT 57.203 32.000 7.51 0.00 44.76 3.24
686 985 6.834168 TTGTTCCTGAACCATTTTAGGATC 57.166 37.500 7.51 0.35 44.76 3.36
687 986 5.261216 TGTTCCTGAACCATTTTAGGATCC 58.739 41.667 2.48 2.48 44.76 3.36
688 987 5.222233 TGTTCCTGAACCATTTTAGGATCCA 60.222 40.000 15.82 0.00 44.76 3.41
689 988 5.528600 TCCTGAACCATTTTAGGATCCAA 57.471 39.130 15.82 3.42 41.48 3.53
696 995 5.751586 ACCATTTTAGGATCCAATACACGT 58.248 37.500 15.82 0.00 0.00 4.49
834 1133 3.012722 GACCGGGTCCATTCCCCA 61.013 66.667 16.55 0.00 44.32 4.96
901 1200 4.244463 CCCACCACCACCGACGTT 62.244 66.667 0.00 0.00 0.00 3.99
969 1268 1.004918 CCGCCTCCCCGCTATAAAG 60.005 63.158 0.00 0.00 0.00 1.85
970 1269 1.668151 CGCCTCCCCGCTATAAAGC 60.668 63.158 0.00 0.00 45.86 3.51
971 1270 1.302591 GCCTCCCCGCTATAAAGCC 60.303 63.158 0.00 0.00 46.68 4.35
1002 1302 4.687215 ACGTCTCCGTCCGTCCGA 62.687 66.667 0.00 0.00 46.28 4.55
1017 1317 1.065251 GTCCGACCCTATGTTCGTCTC 59.935 57.143 0.00 0.00 0.00 3.36
1057 1357 0.035439 GCAACCCAGAAATCTCCGGA 60.035 55.000 2.93 2.93 0.00 5.14
1058 1358 1.739067 CAACCCAGAAATCTCCGGAC 58.261 55.000 0.00 0.00 0.00 4.79
1059 1359 0.249398 AACCCAGAAATCTCCGGACG 59.751 55.000 0.00 0.00 0.00 4.79
1060 1360 1.144057 CCCAGAAATCTCCGGACGG 59.856 63.158 0.00 3.96 0.00 4.79
1061 1361 1.521681 CCAGAAATCTCCGGACGGC 60.522 63.158 0.00 0.00 34.68 5.68
1062 1362 1.878522 CAGAAATCTCCGGACGGCG 60.879 63.158 4.80 4.80 34.68 6.46
1063 1363 3.262686 GAAATCTCCGGACGGCGC 61.263 66.667 6.90 0.00 34.68 6.53
1064 1364 4.077184 AAATCTCCGGACGGCGCA 62.077 61.111 10.83 0.00 34.68 6.09
1065 1365 3.385749 AAATCTCCGGACGGCGCAT 62.386 57.895 10.83 0.00 34.68 4.73
1184 1484 4.735132 CTCTTCACGGCCGCGGAA 62.735 66.667 33.48 26.70 0.00 4.30
1237 1537 1.674980 GTGACGACGAGGAGGAGGT 60.675 63.158 0.00 0.00 0.00 3.85
1310 1610 4.436998 GAGGACCTCGCCGTGGTG 62.437 72.222 16.50 0.00 38.03 4.17
1484 1787 2.503061 CTGGGGTCGATGGAGCTG 59.497 66.667 6.87 0.00 40.51 4.24
1506 1809 3.855853 GGAGGGCGAGGAAGAGGC 61.856 72.222 0.00 0.00 0.00 4.70
1556 1859 2.203209 GCCCCGGTGACATCATCC 60.203 66.667 0.00 0.00 0.00 3.51
1595 1898 2.134789 AGATACGGAAGGTACACGGT 57.865 50.000 0.00 0.00 32.95 4.83
1636 1939 2.987547 GTCGTCGGTGGACCAGGA 60.988 66.667 0.00 0.00 40.17 3.86
1646 1949 0.898789 TGGACCAGGAGACGAGGAAC 60.899 60.000 0.00 0.00 34.87 3.62
1709 2015 2.724839 GCCGTGATCTTAGCGTTGTTTG 60.725 50.000 0.00 0.00 0.00 2.93
1726 2032 2.436173 GTTTGGCCTCCTCAGCTATACT 59.564 50.000 3.32 0.00 0.00 2.12
1754 2327 3.895232 CTTCTCGGAGAAGGAATGGAA 57.105 47.619 31.19 5.17 46.03 3.53
1755 2328 4.207891 CTTCTCGGAGAAGGAATGGAAA 57.792 45.455 31.19 4.51 46.03 3.13
1756 2329 4.579869 CTTCTCGGAGAAGGAATGGAAAA 58.420 43.478 31.19 4.03 46.03 2.29
1757 2330 3.939066 TCTCGGAGAAGGAATGGAAAAC 58.061 45.455 4.96 0.00 34.09 2.43
1758 2331 3.326588 TCTCGGAGAAGGAATGGAAAACA 59.673 43.478 4.96 0.00 34.09 2.83
1759 2332 4.072131 CTCGGAGAAGGAATGGAAAACAA 58.928 43.478 0.00 0.00 34.09 2.83
1760 2333 3.818773 TCGGAGAAGGAATGGAAAACAAC 59.181 43.478 0.00 0.00 0.00 3.32
1761 2334 3.568007 CGGAGAAGGAATGGAAAACAACA 59.432 43.478 0.00 0.00 0.00 3.33
1762 2335 4.037446 CGGAGAAGGAATGGAAAACAACAA 59.963 41.667 0.00 0.00 0.00 2.83
1818 2392 2.176045 GGTGGTTACCCCCTGATTTTG 58.824 52.381 0.00 0.00 41.36 2.44
1819 2393 1.548719 GTGGTTACCCCCTGATTTTGC 59.451 52.381 0.00 0.00 0.00 3.68
1820 2394 1.148027 TGGTTACCCCCTGATTTTGCA 59.852 47.619 0.00 0.00 0.00 4.08
1821 2395 2.225496 TGGTTACCCCCTGATTTTGCAT 60.225 45.455 0.00 0.00 0.00 3.96
1823 2397 3.383505 GGTTACCCCCTGATTTTGCATAC 59.616 47.826 0.00 0.00 0.00 2.39
1832 2426 2.618241 TGATTTTGCATACTCGCATCCC 59.382 45.455 0.00 0.00 42.62 3.85
1843 2437 2.455565 CGCATCCCTCCCCCAAGAT 61.456 63.158 0.00 0.00 0.00 2.40
1846 2440 1.755621 GCATCCCTCCCCCAAGATTTC 60.756 57.143 0.00 0.00 0.00 2.17
1847 2441 1.570501 CATCCCTCCCCCAAGATTTCA 59.429 52.381 0.00 0.00 0.00 2.69
1848 2442 1.298953 TCCCTCCCCCAAGATTTCAG 58.701 55.000 0.00 0.00 0.00 3.02
1849 2443 1.002857 CCCTCCCCCAAGATTTCAGT 58.997 55.000 0.00 0.00 0.00 3.41
1852 2446 2.827921 CCTCCCCCAAGATTTCAGTTTG 59.172 50.000 0.00 0.00 0.00 2.93
1853 2447 3.500289 CCTCCCCCAAGATTTCAGTTTGA 60.500 47.826 0.00 0.00 0.00 2.69
1855 2449 4.750941 TCCCCCAAGATTTCAGTTTGAAT 58.249 39.130 0.00 0.00 36.11 2.57
1856 2450 4.527816 TCCCCCAAGATTTCAGTTTGAATG 59.472 41.667 0.00 0.00 36.11 2.67
1860 2454 6.424812 CCCCAAGATTTCAGTTTGAATGTTTC 59.575 38.462 0.00 0.00 36.11 2.78
1862 2456 7.712205 CCCAAGATTTCAGTTTGAATGTTTCTT 59.288 33.333 0.00 0.00 36.11 2.52
1870 2466 8.066612 TCAGTTTGAATGTTTCTTTTCTCCTT 57.933 30.769 0.00 0.00 0.00 3.36
1905 2501 3.951037 TGTAAGCACACACACCAAGAATT 59.049 39.130 0.00 0.00 0.00 2.17
1907 2503 4.470334 AAGCACACACACCAAGAATTTT 57.530 36.364 0.00 0.00 0.00 1.82
1943 2539 1.532437 TGCAAAGCATGAACTCTGACG 59.468 47.619 0.00 0.00 31.71 4.35
1947 2543 4.614535 GCAAAGCATGAACTCTGACGATTT 60.615 41.667 0.00 0.00 0.00 2.17
1964 2560 5.337554 ACGATTTCATTTCGACGACATAGA 58.662 37.500 0.00 0.00 39.81 1.98
1971 2567 6.330278 TCATTTCGACGACATAGAAGTTGAT 58.670 36.000 0.00 0.00 0.00 2.57
1972 2568 6.811665 TCATTTCGACGACATAGAAGTTGATT 59.188 34.615 0.00 0.00 0.00 2.57
1973 2569 7.330946 TCATTTCGACGACATAGAAGTTGATTT 59.669 33.333 0.00 0.00 0.00 2.17
1974 2570 6.627690 TTCGACGACATAGAAGTTGATTTC 57.372 37.500 0.00 0.00 0.00 2.17
1975 2571 5.705902 TCGACGACATAGAAGTTGATTTCA 58.294 37.500 0.00 0.00 0.00 2.69
1976 2572 6.330278 TCGACGACATAGAAGTTGATTTCAT 58.670 36.000 0.00 0.00 0.00 2.57
1977 2573 6.811665 TCGACGACATAGAAGTTGATTTCATT 59.188 34.615 0.00 0.00 0.00 2.57
1978 2574 6.896613 CGACGACATAGAAGTTGATTTCATTG 59.103 38.462 0.00 0.00 0.00 2.82
1979 2575 7.201435 CGACGACATAGAAGTTGATTTCATTGA 60.201 37.037 0.00 0.00 0.00 2.57
1980 2576 7.743104 ACGACATAGAAGTTGATTTCATTGAC 58.257 34.615 0.00 0.00 0.00 3.18
1981 2577 6.896613 CGACATAGAAGTTGATTTCATTGACG 59.103 38.462 0.00 0.00 0.00 4.35
1982 2578 7.201435 CGACATAGAAGTTGATTTCATTGACGA 60.201 37.037 0.00 0.00 34.66 4.20
1983 2579 8.498054 ACATAGAAGTTGATTTCATTGACGAT 57.502 30.769 0.00 0.00 0.00 3.73
1984 2580 8.950210 ACATAGAAGTTGATTTCATTGACGATT 58.050 29.630 0.00 0.00 0.00 3.34
1985 2581 9.778993 CATAGAAGTTGATTTCATTGACGATTT 57.221 29.630 0.00 0.00 0.00 2.17
1986 2582 9.994432 ATAGAAGTTGATTTCATTGACGATTTC 57.006 29.630 0.00 0.00 0.00 2.17
1987 2583 7.874940 AGAAGTTGATTTCATTGACGATTTCA 58.125 30.769 0.00 0.00 0.00 2.69
1988 2584 8.517878 AGAAGTTGATTTCATTGACGATTTCAT 58.482 29.630 0.00 0.00 32.84 2.57
1989 2585 9.132521 GAAGTTGATTTCATTGACGATTTCATT 57.867 29.630 0.00 0.00 32.84 2.57
1990 2586 9.480053 AAGTTGATTTCATTGACGATTTCATTT 57.520 25.926 0.00 0.00 32.84 2.32
1991 2587 9.132521 AGTTGATTTCATTGACGATTTCATTTC 57.867 29.630 0.00 0.00 32.84 2.17
1992 2588 7.724128 TGATTTCATTGACGATTTCATTTCG 57.276 32.000 0.00 0.00 42.20 3.46
1993 2589 7.525759 TGATTTCATTGACGATTTCATTTCGA 58.474 30.769 0.00 0.00 39.81 3.71
1994 2590 7.481483 TGATTTCATTGACGATTTCATTTCGAC 59.519 33.333 0.00 0.00 39.81 4.20
1995 2591 4.881319 TCATTGACGATTTCATTTCGACG 58.119 39.130 0.00 0.00 39.81 5.12
1996 2592 4.623595 TCATTGACGATTTCATTTCGACGA 59.376 37.500 0.00 0.00 39.81 4.20
1997 2593 3.965209 TGACGATTTCATTTCGACGAC 57.035 42.857 0.00 0.00 39.81 4.34
1998 2594 3.310246 TGACGATTTCATTTCGACGACA 58.690 40.909 0.00 0.00 39.81 4.35
1999 2595 3.924073 TGACGATTTCATTTCGACGACAT 59.076 39.130 0.00 0.00 39.81 3.06
2000 2596 5.096849 TGACGATTTCATTTCGACGACATA 58.903 37.500 0.00 0.00 39.81 2.29
2001 2597 5.746721 TGACGATTTCATTTCGACGACATAT 59.253 36.000 0.00 0.00 39.81 1.78
2002 2598 6.913673 TGACGATTTCATTTCGACGACATATA 59.086 34.615 0.00 0.00 39.81 0.86
2003 2599 7.112984 TGACGATTTCATTTCGACGACATATAG 59.887 37.037 0.00 0.00 39.81 1.31
2004 2600 6.362551 ACGATTTCATTTCGACGACATATAGG 59.637 38.462 0.00 0.00 39.81 2.57
2005 2601 6.581166 CGATTTCATTTCGACGACATATAGGA 59.419 38.462 0.00 0.00 38.88 2.94
2006 2602 7.201274 CGATTTCATTTCGACGACATATAGGAG 60.201 40.741 0.00 0.00 38.88 3.69
2007 2603 6.628919 TTCATTTCGACGACATATAGGAGA 57.371 37.500 0.00 0.00 0.00 3.71
2008 2604 6.819397 TCATTTCGACGACATATAGGAGAT 57.181 37.500 0.00 0.00 0.00 2.75
2009 2605 6.612306 TCATTTCGACGACATATAGGAGATG 58.388 40.000 0.00 0.00 0.00 2.90
2010 2606 6.430000 TCATTTCGACGACATATAGGAGATGA 59.570 38.462 0.00 0.00 0.00 2.92
2011 2607 5.864628 TTCGACGACATATAGGAGATGAG 57.135 43.478 0.00 0.00 0.00 2.90
2012 2608 4.254492 TCGACGACATATAGGAGATGAGG 58.746 47.826 0.00 0.00 0.00 3.86
2013 2609 4.020485 TCGACGACATATAGGAGATGAGGA 60.020 45.833 0.00 0.00 0.00 3.71
2014 2610 4.331443 CGACGACATATAGGAGATGAGGAG 59.669 50.000 0.00 0.00 0.00 3.69
2015 2611 5.249780 ACGACATATAGGAGATGAGGAGT 57.750 43.478 0.00 0.00 0.00 3.85
2016 2612 6.375830 ACGACATATAGGAGATGAGGAGTA 57.624 41.667 0.00 0.00 0.00 2.59
2017 2613 6.174760 ACGACATATAGGAGATGAGGAGTAC 58.825 44.000 0.00 0.00 0.00 2.73
2018 2614 5.292345 CGACATATAGGAGATGAGGAGTACG 59.708 48.000 0.00 0.00 0.00 3.67
2019 2615 6.129414 ACATATAGGAGATGAGGAGTACGT 57.871 41.667 0.00 0.00 0.00 3.57
2020 2616 7.255199 ACATATAGGAGATGAGGAGTACGTA 57.745 40.000 0.00 0.00 0.00 3.57
2021 2617 7.863722 ACATATAGGAGATGAGGAGTACGTAT 58.136 38.462 0.00 0.00 0.00 3.06
2022 2618 7.988599 ACATATAGGAGATGAGGAGTACGTATC 59.011 40.741 0.00 0.00 0.00 2.24
2023 2619 4.023726 AGGAGATGAGGAGTACGTATCC 57.976 50.000 13.19 13.19 35.61 2.59
2024 2620 3.083293 GGAGATGAGGAGTACGTATCCC 58.917 54.545 15.95 12.24 37.57 3.85
2025 2621 3.498121 GGAGATGAGGAGTACGTATCCCA 60.498 52.174 15.95 14.15 37.57 4.37
2026 2622 4.142790 GAGATGAGGAGTACGTATCCCAA 58.857 47.826 15.95 8.58 37.57 4.12
2027 2623 3.890147 AGATGAGGAGTACGTATCCCAAC 59.110 47.826 15.95 12.95 37.57 3.77
2028 2624 3.377253 TGAGGAGTACGTATCCCAACT 57.623 47.619 15.95 3.69 37.57 3.16
2029 2625 4.508551 TGAGGAGTACGTATCCCAACTA 57.491 45.455 15.95 1.37 37.57 2.24
2030 2626 5.057843 TGAGGAGTACGTATCCCAACTAT 57.942 43.478 15.95 2.39 37.57 2.12
2031 2627 6.191657 TGAGGAGTACGTATCCCAACTATA 57.808 41.667 15.95 0.00 37.57 1.31
2032 2628 6.236409 TGAGGAGTACGTATCCCAACTATAG 58.764 44.000 15.95 0.00 37.57 1.31
2033 2629 5.568392 AGGAGTACGTATCCCAACTATAGG 58.432 45.833 15.95 0.00 37.57 2.57
2035 2631 4.670765 AGTACGTATCCCAACTATAGGGG 58.329 47.826 4.43 6.22 46.77 4.79
2036 2632 2.898662 ACGTATCCCAACTATAGGGGG 58.101 52.381 20.47 20.47 46.77 5.40
2056 2652 1.871080 GAGGGTCTGCCGTCATAATG 58.129 55.000 1.95 0.00 46.06 1.90
2057 2653 0.469917 AGGGTCTGCCGTCATAATGG 59.530 55.000 0.00 0.00 34.97 3.16
2058 2654 0.180406 GGGTCTGCCGTCATAATGGT 59.820 55.000 0.00 0.00 33.68 3.55
2059 2655 1.408266 GGGTCTGCCGTCATAATGGTT 60.408 52.381 0.00 0.00 33.68 3.67
2060 2656 2.158871 GGGTCTGCCGTCATAATGGTTA 60.159 50.000 0.00 0.00 33.68 2.85
2061 2657 2.870411 GGTCTGCCGTCATAATGGTTAC 59.130 50.000 0.00 0.00 33.68 2.50
2062 2658 2.870411 GTCTGCCGTCATAATGGTTACC 59.130 50.000 0.00 0.00 33.68 2.85
2063 2659 2.502130 TCTGCCGTCATAATGGTTACCA 59.498 45.455 6.53 6.53 38.19 3.25
2064 2660 2.612212 CTGCCGTCATAATGGTTACCAC 59.388 50.000 6.10 0.00 35.80 4.16
2065 2661 1.944709 GCCGTCATAATGGTTACCACC 59.055 52.381 6.10 0.00 44.56 4.61
2066 2662 2.420967 GCCGTCATAATGGTTACCACCT 60.421 50.000 6.10 0.00 44.61 4.00
2067 2663 3.463944 CCGTCATAATGGTTACCACCTC 58.536 50.000 6.10 0.00 44.61 3.85
2068 2664 3.134081 CCGTCATAATGGTTACCACCTCT 59.866 47.826 6.10 0.00 44.61 3.69
2069 2665 4.369182 CGTCATAATGGTTACCACCTCTC 58.631 47.826 6.10 0.00 44.61 3.20
2070 2666 4.704965 GTCATAATGGTTACCACCTCTCC 58.295 47.826 6.10 0.00 44.61 3.71
2071 2667 4.409247 GTCATAATGGTTACCACCTCTCCT 59.591 45.833 6.10 0.00 44.61 3.69
2072 2668 4.654262 TCATAATGGTTACCACCTCTCCTC 59.346 45.833 6.10 0.00 44.61 3.71
2073 2669 1.880941 ATGGTTACCACCTCTCCTCC 58.119 55.000 6.10 0.00 44.61 4.30
2074 2670 0.790993 TGGTTACCACCTCTCCTCCT 59.209 55.000 0.00 0.00 44.61 3.69
2075 2671 1.196012 GGTTACCACCTCTCCTCCTG 58.804 60.000 0.00 0.00 40.44 3.86
2076 2672 1.552719 GGTTACCACCTCTCCTCCTGT 60.553 57.143 0.00 0.00 40.44 4.00
2077 2673 1.826096 GTTACCACCTCTCCTCCTGTC 59.174 57.143 0.00 0.00 0.00 3.51
2078 2674 1.081481 TACCACCTCTCCTCCTGTCA 58.919 55.000 0.00 0.00 0.00 3.58
2079 2675 0.543174 ACCACCTCTCCTCCTGTCAC 60.543 60.000 0.00 0.00 0.00 3.67
2080 2676 1.261238 CCACCTCTCCTCCTGTCACC 61.261 65.000 0.00 0.00 0.00 4.02
2081 2677 0.252012 CACCTCTCCTCCTGTCACCT 60.252 60.000 0.00 0.00 0.00 4.00
2082 2678 0.040499 ACCTCTCCTCCTGTCACCTC 59.960 60.000 0.00 0.00 0.00 3.85
2083 2679 0.334676 CCTCTCCTCCTGTCACCTCT 59.665 60.000 0.00 0.00 0.00 3.69
2084 2680 1.473258 CTCTCCTCCTGTCACCTCTG 58.527 60.000 0.00 0.00 0.00 3.35
2085 2681 1.005332 CTCTCCTCCTGTCACCTCTGA 59.995 57.143 0.00 0.00 0.00 3.27
2086 2682 1.643286 TCTCCTCCTGTCACCTCTGAT 59.357 52.381 0.00 0.00 0.00 2.90
2087 2683 1.755959 CTCCTCCTGTCACCTCTGATG 59.244 57.143 0.00 0.00 0.00 3.07
2088 2684 1.077828 TCCTCCTGTCACCTCTGATGT 59.922 52.381 0.00 0.00 0.00 3.06
2089 2685 1.905215 CCTCCTGTCACCTCTGATGTT 59.095 52.381 0.00 0.00 0.00 2.71
2090 2686 2.304180 CCTCCTGTCACCTCTGATGTTT 59.696 50.000 0.00 0.00 0.00 2.83
2091 2687 3.244700 CCTCCTGTCACCTCTGATGTTTT 60.245 47.826 0.00 0.00 0.00 2.43
2092 2688 4.392940 CTCCTGTCACCTCTGATGTTTTT 58.607 43.478 0.00 0.00 0.00 1.94
2143 2739 9.807921 ACCCTTTGAAATAAATCAGAAGTTAGA 57.192 29.630 0.00 0.00 0.00 2.10
2150 2746 9.561270 GAAATAAATCAGAAGTTAGAAACCAGC 57.439 33.333 0.00 0.00 0.00 4.85
2151 2747 8.635765 AATAAATCAGAAGTTAGAAACCAGCA 57.364 30.769 0.00 0.00 0.00 4.41
2152 2748 8.814038 ATAAATCAGAAGTTAGAAACCAGCAT 57.186 30.769 0.00 0.00 0.00 3.79
2153 2749 9.905713 ATAAATCAGAAGTTAGAAACCAGCATA 57.094 29.630 0.00 0.00 0.00 3.14
2154 2750 8.635765 AAATCAGAAGTTAGAAACCAGCATAA 57.364 30.769 0.00 0.00 0.00 1.90
2155 2751 8.635765 AATCAGAAGTTAGAAACCAGCATAAA 57.364 30.769 0.00 0.00 0.00 1.40
2156 2752 7.672983 TCAGAAGTTAGAAACCAGCATAAAG 57.327 36.000 0.00 0.00 0.00 1.85
2157 2753 6.655003 TCAGAAGTTAGAAACCAGCATAAAGG 59.345 38.462 0.00 0.00 0.00 3.11
2158 2754 6.431234 CAGAAGTTAGAAACCAGCATAAAGGT 59.569 38.462 0.00 0.00 40.61 3.50
2159 2755 7.606456 CAGAAGTTAGAAACCAGCATAAAGGTA 59.394 37.037 0.00 0.00 37.07 3.08
2160 2756 8.161425 AGAAGTTAGAAACCAGCATAAAGGTAA 58.839 33.333 0.00 0.00 37.07 2.85
2161 2757 8.700439 AAGTTAGAAACCAGCATAAAGGTAAA 57.300 30.769 0.00 0.00 37.07 2.01
2162 2758 8.700439 AGTTAGAAACCAGCATAAAGGTAAAA 57.300 30.769 0.00 0.00 37.07 1.52
2163 2759 9.309224 AGTTAGAAACCAGCATAAAGGTAAAAT 57.691 29.630 0.00 0.00 37.07 1.82
2164 2760 9.353999 GTTAGAAACCAGCATAAAGGTAAAATG 57.646 33.333 0.00 0.00 37.07 2.32
2165 2761 7.539034 AGAAACCAGCATAAAGGTAAAATGT 57.461 32.000 0.00 0.00 37.07 2.71
2166 2762 7.962441 AGAAACCAGCATAAAGGTAAAATGTT 58.038 30.769 0.00 0.00 37.07 2.71
2167 2763 8.428852 AGAAACCAGCATAAAGGTAAAATGTTT 58.571 29.630 0.00 0.00 37.07 2.83
2168 2764 7.961325 AACCAGCATAAAGGTAAAATGTTTG 57.039 32.000 0.00 0.00 37.07 2.93
2169 2765 7.296628 ACCAGCATAAAGGTAAAATGTTTGA 57.703 32.000 0.00 0.00 36.07 2.69
2170 2766 7.906327 ACCAGCATAAAGGTAAAATGTTTGAT 58.094 30.769 0.00 0.00 36.07 2.57
2171 2767 8.374743 ACCAGCATAAAGGTAAAATGTTTGATT 58.625 29.630 0.00 0.00 36.07 2.57
2172 2768 8.872845 CCAGCATAAAGGTAAAATGTTTGATTC 58.127 33.333 0.00 0.00 0.00 2.52
2173 2769 8.586273 CAGCATAAAGGTAAAATGTTTGATTCG 58.414 33.333 0.00 0.00 0.00 3.34
2174 2770 7.759433 AGCATAAAGGTAAAATGTTTGATTCGG 59.241 33.333 0.00 0.00 0.00 4.30
2175 2771 7.544217 GCATAAAGGTAAAATGTTTGATTCGGT 59.456 33.333 0.00 0.00 0.00 4.69
2176 2772 9.418045 CATAAAGGTAAAATGTTTGATTCGGTT 57.582 29.630 0.00 0.00 0.00 4.44
2177 2773 9.990360 ATAAAGGTAAAATGTTTGATTCGGTTT 57.010 25.926 0.00 0.00 0.00 3.27
2178 2774 8.725405 AAAGGTAAAATGTTTGATTCGGTTTT 57.275 26.923 0.00 0.00 0.00 2.43
2179 2775 8.725405 AAGGTAAAATGTTTGATTCGGTTTTT 57.275 26.923 0.00 0.00 0.00 1.94
2196 2792 2.281900 TTTTTGCTAGCCCCGCGT 60.282 55.556 13.29 0.00 0.00 6.01
2197 2793 2.329614 TTTTTGCTAGCCCCGCGTC 61.330 57.895 13.29 0.00 0.00 5.19
2230 2826 4.323477 CGGCTCGGGTGGAAACCA 62.323 66.667 0.00 0.00 0.00 3.67
2231 2827 2.355115 GGCTCGGGTGGAAACCAT 59.645 61.111 0.00 0.00 35.28 3.55
2232 2828 1.605453 GGCTCGGGTGGAAACCATA 59.395 57.895 0.00 0.00 35.28 2.74
2233 2829 0.463833 GGCTCGGGTGGAAACCATAG 60.464 60.000 0.00 0.00 35.28 2.23
2234 2830 1.095807 GCTCGGGTGGAAACCATAGC 61.096 60.000 5.34 5.34 35.28 2.97
2235 2831 0.463833 CTCGGGTGGAAACCATAGCC 60.464 60.000 0.00 0.00 35.28 3.93
2236 2832 1.453197 CGGGTGGAAACCATAGCCC 60.453 63.158 0.00 0.00 35.28 5.19
2237 2833 1.076265 GGGTGGAAACCATAGCCCC 60.076 63.158 0.00 0.00 32.90 5.80
2238 2834 1.076265 GGTGGAAACCATAGCCCCC 60.076 63.158 0.00 0.00 35.28 5.40
2239 2835 1.453197 GTGGAAACCATAGCCCCCG 60.453 63.158 0.00 0.00 35.28 5.73
2240 2836 2.518587 GGAAACCATAGCCCCCGC 60.519 66.667 0.00 0.00 0.00 6.13
2241 2837 2.518587 GAAACCATAGCCCCCGCC 60.519 66.667 0.00 0.00 34.57 6.13
2242 2838 4.499633 AAACCATAGCCCCCGCCG 62.500 66.667 0.00 0.00 34.57 6.46
2257 2853 3.499737 CCGCCAGGCACGTTCATC 61.500 66.667 13.30 0.00 0.00 2.92
2258 2854 3.499737 CGCCAGGCACGTTCATCC 61.500 66.667 13.30 0.00 0.00 3.51
2259 2855 2.045926 GCCAGGCACGTTCATCCT 60.046 61.111 6.55 0.00 0.00 3.24
2260 2856 2.109126 GCCAGGCACGTTCATCCTC 61.109 63.158 6.55 0.00 0.00 3.71
2261 2857 1.450312 CCAGGCACGTTCATCCTCC 60.450 63.158 0.00 0.00 0.00 4.30
2262 2858 1.450312 CAGGCACGTTCATCCTCCC 60.450 63.158 0.00 0.00 0.00 4.30
2263 2859 2.124695 GGCACGTTCATCCTCCCC 60.125 66.667 0.00 0.00 0.00 4.81
2264 2860 2.670148 GGCACGTTCATCCTCCCCT 61.670 63.158 0.00 0.00 0.00 4.79
2265 2861 1.299976 GCACGTTCATCCTCCCCTT 59.700 57.895 0.00 0.00 0.00 3.95
2266 2862 0.744771 GCACGTTCATCCTCCCCTTC 60.745 60.000 0.00 0.00 0.00 3.46
2267 2863 0.107654 CACGTTCATCCTCCCCTTCC 60.108 60.000 0.00 0.00 0.00 3.46
2268 2864 1.272554 ACGTTCATCCTCCCCTTCCC 61.273 60.000 0.00 0.00 0.00 3.97
2269 2865 1.923586 GTTCATCCTCCCCTTCCCC 59.076 63.158 0.00 0.00 0.00 4.81
2270 2866 0.624795 GTTCATCCTCCCCTTCCCCT 60.625 60.000 0.00 0.00 0.00 4.79
2271 2867 0.327576 TTCATCCTCCCCTTCCCCTC 60.328 60.000 0.00 0.00 0.00 4.30
2272 2868 1.772156 CATCCTCCCCTTCCCCTCC 60.772 68.421 0.00 0.00 0.00 4.30
2273 2869 3.412350 ATCCTCCCCTTCCCCTCCG 62.412 68.421 0.00 0.00 0.00 4.63
2285 2881 3.905678 CCTCCGCCACCGCTAGAG 61.906 72.222 0.00 0.00 34.47 2.43
2286 2882 3.905678 CTCCGCCACCGCTAGAGG 61.906 72.222 11.46 11.46 32.29 3.69
2287 2883 4.435970 TCCGCCACCGCTAGAGGA 62.436 66.667 20.46 0.00 34.73 3.71
2288 2884 3.905678 CCGCCACCGCTAGAGGAG 61.906 72.222 20.46 11.44 34.73 3.69
2289 2885 3.905678 CGCCACCGCTAGAGGAGG 61.906 72.222 21.98 21.98 43.70 4.30
2291 2887 2.787567 GCCACCGCTAGAGGAGGTC 61.788 68.421 25.51 16.13 44.85 3.85
2292 2888 2.482333 CCACCGCTAGAGGAGGTCG 61.482 68.421 20.46 0.00 44.85 4.79
2293 2889 1.451567 CACCGCTAGAGGAGGTCGA 60.452 63.158 20.46 0.00 44.85 4.20
2294 2890 1.451747 ACCGCTAGAGGAGGTCGAC 60.452 63.158 20.46 7.13 44.85 4.20
2295 2891 2.535788 CCGCTAGAGGAGGTCGACG 61.536 68.421 6.69 0.00 0.00 5.12
2296 2892 2.535788 CGCTAGAGGAGGTCGACGG 61.536 68.421 9.92 0.00 0.00 4.79
2297 2893 2.188161 GCTAGAGGAGGTCGACGGG 61.188 68.421 9.92 0.00 0.00 5.28
2298 2894 2.124403 TAGAGGAGGTCGACGGGC 60.124 66.667 9.92 0.75 0.00 6.13
2319 2915 2.203209 GCCCCAGGCGGTTGATAG 60.203 66.667 0.00 0.00 39.62 2.08
2320 2916 2.203209 CCCCAGGCGGTTGATAGC 60.203 66.667 0.00 0.00 0.00 2.97
2322 2918 2.588877 CCAGGCGGTTGATAGCGG 60.589 66.667 0.00 0.00 44.99 5.52
2327 2923 2.960129 CGGTTGATAGCGGCGGTC 60.960 66.667 17.55 2.11 41.36 4.79
2328 2924 2.960129 GGTTGATAGCGGCGGTCG 60.960 66.667 17.55 0.00 42.76 4.79
2329 2925 2.103538 GTTGATAGCGGCGGTCGA 59.896 61.111 17.55 0.00 42.43 4.20
2330 2926 1.944676 GTTGATAGCGGCGGTCGAG 60.945 63.158 17.55 0.00 42.43 4.04
2331 2927 3.133767 TTGATAGCGGCGGTCGAGG 62.134 63.158 17.55 0.00 42.43 4.63
2338 2934 3.453679 GGCGGTCGAGGCTCTCTT 61.454 66.667 13.50 0.00 0.00 2.85
2339 2935 2.103340 GCGGTCGAGGCTCTCTTC 59.897 66.667 13.50 0.12 0.00 2.87
2340 2936 2.411504 GCGGTCGAGGCTCTCTTCT 61.412 63.158 13.50 0.00 0.00 2.85
2341 2937 1.725066 CGGTCGAGGCTCTCTTCTC 59.275 63.158 13.50 0.00 0.00 2.87
2342 2938 0.746563 CGGTCGAGGCTCTCTTCTCT 60.747 60.000 13.50 0.00 0.00 3.10
2343 2939 1.470051 GGTCGAGGCTCTCTTCTCTT 58.530 55.000 13.50 0.00 0.00 2.85
2344 2940 1.404035 GGTCGAGGCTCTCTTCTCTTC 59.596 57.143 13.50 0.00 0.00 2.87
2345 2941 1.404035 GTCGAGGCTCTCTTCTCTTCC 59.596 57.143 13.50 0.00 0.00 3.46
2346 2942 0.744281 CGAGGCTCTCTTCTCTTCCC 59.256 60.000 13.50 0.00 0.00 3.97
2347 2943 1.684869 CGAGGCTCTCTTCTCTTCCCT 60.685 57.143 13.50 0.00 0.00 4.20
2348 2944 2.031870 GAGGCTCTCTTCTCTTCCCTC 58.968 57.143 7.40 0.00 0.00 4.30
2349 2945 1.119684 GGCTCTCTTCTCTTCCCTCC 58.880 60.000 0.00 0.00 0.00 4.30
2350 2946 1.119684 GCTCTCTTCTCTTCCCTCCC 58.880 60.000 0.00 0.00 0.00 4.30
2351 2947 1.398692 CTCTCTTCTCTTCCCTCCCG 58.601 60.000 0.00 0.00 0.00 5.14
2352 2948 0.684805 TCTCTTCTCTTCCCTCCCGC 60.685 60.000 0.00 0.00 0.00 6.13
2353 2949 2.010582 CTCTTCTCTTCCCTCCCGCG 62.011 65.000 0.00 0.00 0.00 6.46
2354 2950 3.724914 CTTCTCTTCCCTCCCGCGC 62.725 68.421 0.00 0.00 0.00 6.86
2370 2966 4.899239 GCCAGATCGGTGAGGCGG 62.899 72.222 5.66 0.00 37.41 6.13
2371 2967 4.227134 CCAGATCGGTGAGGCGGG 62.227 72.222 0.00 0.00 0.00 6.13
2372 2968 3.461773 CAGATCGGTGAGGCGGGT 61.462 66.667 0.00 0.00 0.00 5.28
2373 2969 3.148279 AGATCGGTGAGGCGGGTC 61.148 66.667 0.00 0.00 0.00 4.46
2374 2970 3.458163 GATCGGTGAGGCGGGTCA 61.458 66.667 0.00 0.00 0.00 4.02
2375 2971 3.718210 GATCGGTGAGGCGGGTCAC 62.718 68.421 4.35 4.35 45.30 3.67
2379 2975 3.717294 GTGAGGCGGGTCACCCAT 61.717 66.667 15.17 0.00 45.83 4.00
2380 2976 3.716195 TGAGGCGGGTCACCCATG 61.716 66.667 15.17 0.00 45.83 3.66
2381 2977 4.489771 GAGGCGGGTCACCCATGG 62.490 72.222 15.17 4.14 45.83 3.66
2394 2990 4.809496 CATGGCGCTGGGGAGCTT 62.809 66.667 7.64 0.00 38.32 3.74
2395 2991 4.052518 ATGGCGCTGGGGAGCTTT 62.053 61.111 7.64 0.00 38.32 3.51
2396 2992 4.722700 TGGCGCTGGGGAGCTTTC 62.723 66.667 7.64 0.00 38.32 2.62
2406 3002 2.647683 GGGAGCTTTCCCCTAATCTG 57.352 55.000 1.59 0.00 44.18 2.90
2407 3003 1.477740 GGGAGCTTTCCCCTAATCTGC 60.478 57.143 1.59 0.00 44.18 4.26
2408 3004 1.212935 GGAGCTTTCCCCTAATCTGCA 59.787 52.381 0.00 0.00 0.00 4.41
2409 3005 2.158549 GGAGCTTTCCCCTAATCTGCAT 60.159 50.000 0.00 0.00 0.00 3.96
2410 3006 3.145286 GAGCTTTCCCCTAATCTGCATC 58.855 50.000 0.00 0.00 0.00 3.91
2411 3007 1.876156 GCTTTCCCCTAATCTGCATCG 59.124 52.381 0.00 0.00 0.00 3.84
2412 3008 1.876156 CTTTCCCCTAATCTGCATCGC 59.124 52.381 0.00 0.00 0.00 4.58
2413 3009 0.249868 TTCCCCTAATCTGCATCGCG 60.250 55.000 0.00 0.00 0.00 5.87
2414 3010 1.669115 CCCCTAATCTGCATCGCGG 60.669 63.158 6.13 0.00 36.06 6.46
2742 3338 4.094684 GAAGATCTGGTGGCGTCG 57.905 61.111 0.00 0.00 0.00 5.12
2743 3339 1.519455 GAAGATCTGGTGGCGTCGG 60.519 63.158 0.00 0.00 0.00 4.79
2744 3340 2.227089 GAAGATCTGGTGGCGTCGGT 62.227 60.000 0.00 0.00 0.00 4.69
2745 3341 2.202756 GATCTGGTGGCGTCGGTC 60.203 66.667 0.00 0.00 0.00 4.79
2746 3342 4.129737 ATCTGGTGGCGTCGGTCG 62.130 66.667 0.00 0.00 43.12 4.79
2748 3344 4.657824 CTGGTGGCGTCGGTCGTT 62.658 66.667 0.00 0.00 42.13 3.85
2749 3345 4.651008 TGGTGGCGTCGGTCGTTC 62.651 66.667 0.00 0.00 42.13 3.95
2751 3347 4.688419 GTGGCGTCGGTCGTTCGA 62.688 66.667 12.33 0.00 42.13 3.71
2752 3348 3.740397 TGGCGTCGGTCGTTCGAT 61.740 61.111 12.33 0.00 41.40 3.59
2753 3349 3.245315 GGCGTCGGTCGTTCGATG 61.245 66.667 14.54 14.54 45.73 3.84
2754 3350 3.245315 GCGTCGGTCGTTCGATGG 61.245 66.667 18.29 10.24 43.87 3.51
2755 3351 2.578713 CGTCGGTCGTTCGATGGG 60.579 66.667 12.18 0.00 41.07 4.00
2756 3352 2.884207 GTCGGTCGTTCGATGGGC 60.884 66.667 6.20 0.00 41.40 5.36
2757 3353 3.066190 TCGGTCGTTCGATGGGCT 61.066 61.111 0.00 0.00 33.92 5.19
2758 3354 2.582498 CGGTCGTTCGATGGGCTC 60.582 66.667 0.00 0.00 0.00 4.70
2766 3362 2.892425 CGATGGGCTCGCAAGGTC 60.892 66.667 0.00 0.00 41.14 3.85
2767 3363 2.268920 GATGGGCTCGCAAGGTCA 59.731 61.111 0.00 0.00 38.47 4.02
2768 3364 1.153086 GATGGGCTCGCAAGGTCAT 60.153 57.895 0.00 0.00 38.47 3.06
2769 3365 1.442526 GATGGGCTCGCAAGGTCATG 61.443 60.000 0.00 0.00 38.47 3.07
2770 3366 2.825836 GGGCTCGCAAGGTCATGG 60.826 66.667 0.00 0.00 38.47 3.66
2771 3367 3.512516 GGCTCGCAAGGTCATGGC 61.513 66.667 0.00 0.00 38.47 4.40
2777 3373 2.361610 CAAGGTCATGGCGGCCTT 60.362 61.111 21.46 11.55 42.77 4.35
2778 3374 2.361610 AAGGTCATGGCGGCCTTG 60.362 61.111 24.64 24.64 40.71 3.61
2779 3375 3.944250 AAGGTCATGGCGGCCTTGG 62.944 63.158 28.28 15.04 40.71 3.61
2780 3376 4.740822 GGTCATGGCGGCCTTGGT 62.741 66.667 28.28 7.82 30.78 3.67
2781 3377 3.134127 GTCATGGCGGCCTTGGTC 61.134 66.667 28.28 19.61 30.78 4.02
2782 3378 4.776322 TCATGGCGGCCTTGGTCG 62.776 66.667 28.28 9.52 30.78 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 109 2.541588 GCAGTTTGCTTGACACAATCGT 60.542 45.455 0.00 0.00 40.96 3.73
83 119 3.772932 TGTTCTTCTTGCAGTTTGCTTG 58.227 40.909 2.48 0.00 45.31 4.01
167 203 8.712363 GCAATCAGTTTTAATTTCCTTTTCCTC 58.288 33.333 0.00 0.00 0.00 3.71
171 208 9.783081 ATCAGCAATCAGTTTTAATTTCCTTTT 57.217 25.926 0.00 0.00 0.00 2.27
185 222 4.607293 TCCGCTATAATCAGCAATCAGT 57.393 40.909 0.00 0.00 41.88 3.41
192 229 2.288273 ACCGTCTTCCGCTATAATCAGC 60.288 50.000 0.00 0.00 38.23 4.26
195 232 3.306818 GTCACCGTCTTCCGCTATAATC 58.693 50.000 0.00 0.00 34.38 1.75
196 233 2.287427 CGTCACCGTCTTCCGCTATAAT 60.287 50.000 0.00 0.00 34.38 1.28
209 246 1.373748 CATCCGAAACCGTCACCGT 60.374 57.895 0.00 0.00 0.00 4.83
210 247 2.098233 CCATCCGAAACCGTCACCG 61.098 63.158 0.00 0.00 0.00 4.94
251 288 2.045242 GCCGGGGAAGGAAGGAAC 60.045 66.667 2.18 0.00 0.00 3.62
252 289 3.335729 GGCCGGGGAAGGAAGGAA 61.336 66.667 2.18 0.00 0.00 3.36
253 290 4.667935 TGGCCGGGGAAGGAAGGA 62.668 66.667 2.18 0.00 0.00 3.36
254 291 4.426313 GTGGCCGGGGAAGGAAGG 62.426 72.222 2.18 0.00 0.00 3.46
265 302 1.243902 ATTTTAGTGTGGTGTGGCCG 58.756 50.000 0.00 0.00 41.21 6.13
275 312 4.469945 TGCTGCTAGGGAGTATTTTAGTGT 59.530 41.667 0.00 0.00 0.00 3.55
280 317 4.164988 AGACATGCTGCTAGGGAGTATTTT 59.835 41.667 0.00 0.00 0.00 1.82
296 333 3.717400 TTGAGGATACGAGAGACATGC 57.283 47.619 0.00 0.00 46.39 4.06
300 337 8.928270 TCTTTATTTTTGAGGATACGAGAGAC 57.072 34.615 0.00 0.00 46.39 3.36
339 376 1.482278 CAAGAAGCCGCGAGAGATAC 58.518 55.000 8.23 0.00 0.00 2.24
358 395 1.566018 GGCGACAGTACAGCAACACC 61.566 60.000 0.00 0.00 0.00 4.16
359 396 1.566018 GGGCGACAGTACAGCAACAC 61.566 60.000 0.00 0.00 0.00 3.32
360 397 1.301401 GGGCGACAGTACAGCAACA 60.301 57.895 0.00 0.00 0.00 3.33
361 398 2.033194 GGGGCGACAGTACAGCAAC 61.033 63.158 0.00 0.00 0.00 4.17
362 399 2.214216 AGGGGCGACAGTACAGCAA 61.214 57.895 0.00 0.00 0.00 3.91
363 400 2.603473 AGGGGCGACAGTACAGCA 60.603 61.111 0.00 0.00 0.00 4.41
364 401 2.125512 CAGGGGCGACAGTACAGC 60.126 66.667 0.00 0.00 0.00 4.40
392 429 5.352846 TGTTTTGGTGACCGATATATGTGTG 59.647 40.000 0.00 0.00 0.00 3.82
402 439 2.116827 ACTTGTGTTTTGGTGACCGA 57.883 45.000 0.00 0.00 0.00 4.69
452 749 4.513442 ACATCGTATAGCAAAGAAGCCAA 58.487 39.130 0.00 0.00 34.23 4.52
467 764 4.740268 CAAGCTTGTAGGTGTACATCGTA 58.260 43.478 18.65 0.00 38.98 3.43
471 768 3.074412 GTGCAAGCTTGTAGGTGTACAT 58.926 45.455 26.55 0.00 38.98 2.29
472 769 2.489971 GTGCAAGCTTGTAGGTGTACA 58.510 47.619 26.55 11.22 37.38 2.90
473 770 1.459592 CGTGCAAGCTTGTAGGTGTAC 59.540 52.381 26.55 9.89 0.00 2.90
496 793 7.030165 GTCATTCATATAGTATGCAGTACGCT 58.970 38.462 10.27 0.00 43.06 5.07
505 802 9.573166 TTTTTGAGGGGTCATTCATATAGTATG 57.427 33.333 0.00 0.00 0.00 2.39
515 814 2.893489 ACTGCTTTTTGAGGGGTCATTC 59.107 45.455 0.00 0.00 0.00 2.67
520 819 1.497286 TGGTACTGCTTTTTGAGGGGT 59.503 47.619 0.00 0.00 0.00 4.95
521 820 1.886542 GTGGTACTGCTTTTTGAGGGG 59.113 52.381 0.00 0.00 0.00 4.79
535 834 5.846203 TGTTTTGTAGTACAGAGGTGGTAC 58.154 41.667 2.68 0.00 41.05 3.34
557 856 8.597144 GCTAAACTAGCCTAATAAACGTTTTG 57.403 34.615 20.19 7.36 45.95 2.44
606 905 2.906389 AGTCTGTCATGCTCCTTGGTAA 59.094 45.455 0.00 0.00 0.00 2.85
610 909 2.756840 TCAGTCTGTCATGCTCCTTG 57.243 50.000 0.00 0.00 0.00 3.61
611 910 3.181482 CGTATCAGTCTGTCATGCTCCTT 60.181 47.826 0.00 0.00 0.00 3.36
613 912 2.359214 TCGTATCAGTCTGTCATGCTCC 59.641 50.000 0.00 0.00 0.00 4.70
615 914 4.662468 ATTCGTATCAGTCTGTCATGCT 57.338 40.909 0.00 0.00 0.00 3.79
616 915 5.725110 AAATTCGTATCAGTCTGTCATGC 57.275 39.130 0.00 0.00 0.00 4.06
640 939 8.247562 ACAAATATGCTTGTATCGCCTTAAAAA 58.752 29.630 0.00 0.00 37.76 1.94
641 940 7.767261 ACAAATATGCTTGTATCGCCTTAAAA 58.233 30.769 0.00 0.00 37.76 1.52
642 941 7.328277 ACAAATATGCTTGTATCGCCTTAAA 57.672 32.000 0.00 0.00 37.76 1.52
643 942 6.935741 ACAAATATGCTTGTATCGCCTTAA 57.064 33.333 0.00 0.00 37.76 1.85
644 943 6.017440 GGAACAAATATGCTTGTATCGCCTTA 60.017 38.462 0.00 0.00 38.59 2.69
645 944 5.221048 GGAACAAATATGCTTGTATCGCCTT 60.221 40.000 0.00 0.00 38.59 4.35
646 945 4.275936 GGAACAAATATGCTTGTATCGCCT 59.724 41.667 0.00 0.00 38.59 5.52
647 946 4.275936 AGGAACAAATATGCTTGTATCGCC 59.724 41.667 0.00 0.00 38.59 5.54
648 947 5.007626 TCAGGAACAAATATGCTTGTATCGC 59.992 40.000 0.00 0.00 38.59 4.58
649 948 6.603237 TCAGGAACAAATATGCTTGTATCG 57.397 37.500 0.00 0.00 38.59 2.92
650 949 7.148086 TGGTTCAGGAACAAATATGCTTGTATC 60.148 37.037 13.62 0.00 42.85 2.24
651 950 6.663093 TGGTTCAGGAACAAATATGCTTGTAT 59.337 34.615 13.62 0.00 42.85 2.29
652 951 6.007076 TGGTTCAGGAACAAATATGCTTGTA 58.993 36.000 13.62 0.00 42.85 2.41
653 952 4.832266 TGGTTCAGGAACAAATATGCTTGT 59.168 37.500 13.62 0.00 42.85 3.16
654 953 5.389859 TGGTTCAGGAACAAATATGCTTG 57.610 39.130 13.62 0.00 42.85 4.01
655 954 6.610075 AATGGTTCAGGAACAAATATGCTT 57.390 33.333 13.62 0.00 42.85 3.91
656 955 6.610075 AAATGGTTCAGGAACAAATATGCT 57.390 33.333 13.62 0.00 42.85 3.79
657 956 7.492344 CCTAAAATGGTTCAGGAACAAATATGC 59.508 37.037 13.62 0.00 42.85 3.14
658 957 8.748412 TCCTAAAATGGTTCAGGAACAAATATG 58.252 33.333 13.62 0.00 42.85 1.78
659 958 8.893563 TCCTAAAATGGTTCAGGAACAAATAT 57.106 30.769 13.62 0.86 42.85 1.28
660 959 8.893563 ATCCTAAAATGGTTCAGGAACAAATA 57.106 30.769 13.62 0.00 42.85 1.40
661 960 7.093333 GGATCCTAAAATGGTTCAGGAACAAAT 60.093 37.037 13.62 4.52 42.85 2.32
662 961 6.210584 GGATCCTAAAATGGTTCAGGAACAAA 59.789 38.462 13.62 2.41 42.85 2.83
663 962 5.714806 GGATCCTAAAATGGTTCAGGAACAA 59.285 40.000 13.62 3.08 42.85 2.83
664 963 5.222233 TGGATCCTAAAATGGTTCAGGAACA 60.222 40.000 14.23 0.00 42.85 3.18
665 964 5.261216 TGGATCCTAAAATGGTTCAGGAAC 58.739 41.667 14.23 3.58 40.48 3.62
666 965 5.528600 TGGATCCTAAAATGGTTCAGGAA 57.471 39.130 14.23 0.00 40.48 3.36
667 966 5.528600 TTGGATCCTAAAATGGTTCAGGA 57.471 39.130 14.23 0.00 41.31 3.86
668 967 6.833416 TGTATTGGATCCTAAAATGGTTCAGG 59.167 38.462 14.23 0.00 0.00 3.86
669 968 7.467267 CGTGTATTGGATCCTAAAATGGTTCAG 60.467 40.741 14.23 0.00 0.00 3.02
670 969 6.317642 CGTGTATTGGATCCTAAAATGGTTCA 59.682 38.462 14.23 1.86 0.00 3.18
671 970 6.317893 ACGTGTATTGGATCCTAAAATGGTTC 59.682 38.462 14.23 0.00 0.00 3.62
672 971 6.094881 CACGTGTATTGGATCCTAAAATGGTT 59.905 38.462 14.23 0.00 0.00 3.67
673 972 5.588648 CACGTGTATTGGATCCTAAAATGGT 59.411 40.000 14.23 1.06 0.00 3.55
674 973 5.588648 ACACGTGTATTGGATCCTAAAATGG 59.411 40.000 21.98 0.41 0.00 3.16
675 974 6.677781 ACACGTGTATTGGATCCTAAAATG 57.322 37.500 21.98 3.86 0.00 2.32
676 975 6.477688 CGTACACGTGTATTGGATCCTAAAAT 59.522 38.462 29.58 7.16 32.54 1.82
677 976 5.806502 CGTACACGTGTATTGGATCCTAAAA 59.193 40.000 29.58 2.68 32.54 1.52
678 977 5.342433 CGTACACGTGTATTGGATCCTAAA 58.658 41.667 29.58 3.15 32.54 1.85
679 978 4.923893 CGTACACGTGTATTGGATCCTAA 58.076 43.478 29.58 3.37 32.54 2.69
680 979 4.556942 CGTACACGTGTATTGGATCCTA 57.443 45.455 29.58 5.68 32.54 2.94
681 980 3.431922 CGTACACGTGTATTGGATCCT 57.568 47.619 29.58 2.36 32.54 3.24
696 995 3.551407 TGCCACCTGCCACGTACA 61.551 61.111 0.00 0.00 40.16 2.90
733 1032 2.550180 CTCGAGACGGAGATGCAGATAA 59.450 50.000 6.58 0.00 36.08 1.75
834 1133 4.918360 TGGCCTGGTCTGGGTGGT 62.918 66.667 3.32 0.00 0.00 4.16
935 1234 2.592861 GGCTGATCATCCGTGGGC 60.593 66.667 0.00 0.00 0.00 5.36
998 1297 1.386533 GAGACGAACATAGGGTCGGA 58.613 55.000 20.01 0.00 35.87 4.55
1060 1360 4.496336 AGAGGCTTGGGGATGCGC 62.496 66.667 0.00 0.00 0.00 6.09
1061 1361 2.203126 GAGAGGCTTGGGGATGCG 60.203 66.667 0.00 0.00 0.00 4.73
1062 1362 2.203126 CGAGAGGCTTGGGGATGC 60.203 66.667 0.00 0.00 0.00 3.91
1063 1363 1.045350 TCTCGAGAGGCTTGGGGATG 61.045 60.000 12.08 0.00 0.00 3.51
1064 1364 0.325671 TTCTCGAGAGGCTTGGGGAT 60.326 55.000 15.94 0.00 0.00 3.85
1065 1365 0.972983 CTTCTCGAGAGGCTTGGGGA 60.973 60.000 15.94 0.00 0.00 4.81
1310 1610 1.378124 CCTCCTTCGACTCCTCGTCC 61.378 65.000 0.00 0.00 41.02 4.79
1314 1614 1.720694 CGCTCCTCCTTCGACTCCTC 61.721 65.000 0.00 0.00 0.00 3.71
1323 1623 3.403558 GAAGGCCCGCTCCTCCTT 61.404 66.667 0.00 0.00 42.47 3.36
1463 1763 3.144120 CTCCATCGACCCCAGCGAG 62.144 68.421 0.00 0.00 41.49 5.03
1484 1787 2.683933 TTCCTCGCCCTCCTGTCC 60.684 66.667 0.00 0.00 0.00 4.02
1506 1809 2.433838 CTCAGACAGCAGGCGGTG 60.434 66.667 0.88 6.92 46.34 4.94
1569 1872 5.392811 CGTGTACCTTCCGTATCTTCTTCTT 60.393 44.000 0.00 0.00 0.00 2.52
1570 1873 4.096081 CGTGTACCTTCCGTATCTTCTTCT 59.904 45.833 0.00 0.00 0.00 2.85
1571 1874 4.349501 CGTGTACCTTCCGTATCTTCTTC 58.650 47.826 0.00 0.00 0.00 2.87
1572 1875 3.129988 CCGTGTACCTTCCGTATCTTCTT 59.870 47.826 0.00 0.00 0.00 2.52
1636 1939 3.441290 CCTCGCCGTTCCTCGTCT 61.441 66.667 0.00 0.00 37.94 4.18
1646 1949 1.822613 TGCTACTAGTCCCTCGCCG 60.823 63.158 0.00 0.00 0.00 6.46
1688 1991 1.076332 AACAACGCTAAGATCACGGC 58.924 50.000 0.00 0.00 0.00 5.68
1709 2015 3.502356 ACTAAGTATAGCTGAGGAGGCC 58.498 50.000 0.00 0.00 31.96 5.19
1750 2323 6.017852 GTGTGTTTTCCTTTTGTTGTTTTCCA 60.018 34.615 0.00 0.00 0.00 3.53
1753 2326 7.066404 ACAAGTGTGTTTTCCTTTTGTTGTTTT 59.934 29.630 0.00 0.00 32.58 2.43
1754 2327 6.540551 ACAAGTGTGTTTTCCTTTTGTTGTTT 59.459 30.769 0.00 0.00 32.58 2.83
1755 2328 6.052360 ACAAGTGTGTTTTCCTTTTGTTGTT 58.948 32.000 0.00 0.00 32.58 2.83
1756 2329 5.606505 ACAAGTGTGTTTTCCTTTTGTTGT 58.393 33.333 0.00 0.00 32.58 3.32
1757 2330 6.642950 TGTACAAGTGTGTTTTCCTTTTGTTG 59.357 34.615 0.00 0.00 39.30 3.33
1758 2331 6.750148 TGTACAAGTGTGTTTTCCTTTTGTT 58.250 32.000 0.00 0.00 39.30 2.83
1759 2332 6.334102 TGTACAAGTGTGTTTTCCTTTTGT 57.666 33.333 0.00 0.00 39.30 2.83
1760 2333 5.804979 CCTGTACAAGTGTGTTTTCCTTTTG 59.195 40.000 0.00 0.00 39.30 2.44
1761 2334 5.712917 TCCTGTACAAGTGTGTTTTCCTTTT 59.287 36.000 0.00 0.00 39.30 2.27
1762 2335 5.124936 GTCCTGTACAAGTGTGTTTTCCTTT 59.875 40.000 0.00 0.00 39.30 3.11
1808 2382 2.016318 TGCGAGTATGCAAAATCAGGG 58.984 47.619 0.00 0.00 43.02 4.45
1818 2392 1.004440 GGGAGGGATGCGAGTATGC 60.004 63.158 0.00 0.00 0.00 3.14
1819 2393 1.674057 GGGGAGGGATGCGAGTATG 59.326 63.158 0.00 0.00 0.00 2.39
1820 2394 1.536662 GGGGGAGGGATGCGAGTAT 60.537 63.158 0.00 0.00 0.00 2.12
1821 2395 2.122989 GGGGGAGGGATGCGAGTA 60.123 66.667 0.00 0.00 0.00 2.59
1823 2397 3.089874 TTGGGGGAGGGATGCGAG 61.090 66.667 0.00 0.00 0.00 5.03
1832 2426 3.766545 TCAAACTGAAATCTTGGGGGAG 58.233 45.455 0.00 0.00 0.00 4.30
1843 2437 8.531146 AGGAGAAAAGAAACATTCAAACTGAAA 58.469 29.630 0.00 0.00 40.12 2.69
1846 2440 7.761249 ACAAGGAGAAAAGAAACATTCAAACTG 59.239 33.333 0.00 0.00 0.00 3.16
1847 2441 7.840931 ACAAGGAGAAAAGAAACATTCAAACT 58.159 30.769 0.00 0.00 0.00 2.66
1848 2442 9.020813 GTACAAGGAGAAAAGAAACATTCAAAC 57.979 33.333 0.00 0.00 0.00 2.93
1849 2443 8.966868 AGTACAAGGAGAAAAGAAACATTCAAA 58.033 29.630 0.00 0.00 0.00 2.69
1870 2466 7.873505 TGTGTGTGCTTACATGTAATAAGTACA 59.126 33.333 20.26 20.26 46.43 2.90
1937 2533 3.606777 GTCGTCGAAATGAAATCGTCAGA 59.393 43.478 0.00 0.00 40.43 3.27
1943 2539 7.223058 ACTTCTATGTCGTCGAAATGAAATC 57.777 36.000 8.23 0.00 0.00 2.17
1947 2543 5.705902 TCAACTTCTATGTCGTCGAAATGA 58.294 37.500 8.23 1.40 0.00 2.57
1964 2560 9.480053 AAATGAAATCGTCAATGAAATCAACTT 57.520 25.926 0.00 0.00 40.50 2.66
1971 2567 5.788041 CGTCGAAATGAAATCGTCAATGAAA 59.212 36.000 0.00 0.00 40.50 2.69
1972 2568 5.119434 TCGTCGAAATGAAATCGTCAATGAA 59.881 36.000 0.00 0.00 40.50 2.57
1973 2569 4.623595 TCGTCGAAATGAAATCGTCAATGA 59.376 37.500 0.00 0.00 40.50 2.57
1974 2570 4.719164 GTCGTCGAAATGAAATCGTCAATG 59.281 41.667 0.00 0.00 40.50 2.82
1975 2571 4.387559 TGTCGTCGAAATGAAATCGTCAAT 59.612 37.500 0.00 0.00 40.50 2.57
1976 2572 3.736759 TGTCGTCGAAATGAAATCGTCAA 59.263 39.130 0.00 0.00 40.50 3.18
1977 2573 3.310246 TGTCGTCGAAATGAAATCGTCA 58.690 40.909 0.00 0.00 40.99 4.35
1978 2574 3.965209 TGTCGTCGAAATGAAATCGTC 57.035 42.857 0.00 0.00 40.99 4.20
1979 2575 6.362551 CCTATATGTCGTCGAAATGAAATCGT 59.637 38.462 8.23 0.00 40.99 3.73
1980 2576 6.581166 TCCTATATGTCGTCGAAATGAAATCG 59.419 38.462 8.23 0.00 41.53 3.34
1981 2577 7.808381 TCTCCTATATGTCGTCGAAATGAAATC 59.192 37.037 8.23 0.00 0.00 2.17
1982 2578 7.658261 TCTCCTATATGTCGTCGAAATGAAAT 58.342 34.615 8.23 0.00 0.00 2.17
1983 2579 7.034685 TCTCCTATATGTCGTCGAAATGAAA 57.965 36.000 8.23 0.00 0.00 2.69
1984 2580 6.628919 TCTCCTATATGTCGTCGAAATGAA 57.371 37.500 8.23 0.00 0.00 2.57
1985 2581 6.430000 TCATCTCCTATATGTCGTCGAAATGA 59.570 38.462 8.23 0.00 0.00 2.57
1986 2582 6.612306 TCATCTCCTATATGTCGTCGAAATG 58.388 40.000 8.23 0.00 0.00 2.32
1987 2583 6.127869 CCTCATCTCCTATATGTCGTCGAAAT 60.128 42.308 2.90 2.90 0.00 2.17
1988 2584 5.181433 CCTCATCTCCTATATGTCGTCGAAA 59.819 44.000 0.00 0.00 0.00 3.46
1989 2585 4.695928 CCTCATCTCCTATATGTCGTCGAA 59.304 45.833 0.00 0.00 0.00 3.71
1990 2586 4.020485 TCCTCATCTCCTATATGTCGTCGA 60.020 45.833 0.00 0.00 0.00 4.20
1991 2587 4.254492 TCCTCATCTCCTATATGTCGTCG 58.746 47.826 0.00 0.00 0.00 5.12
1992 2588 5.250200 ACTCCTCATCTCCTATATGTCGTC 58.750 45.833 0.00 0.00 0.00 4.20
1993 2589 5.249780 ACTCCTCATCTCCTATATGTCGT 57.750 43.478 0.00 0.00 0.00 4.34
1994 2590 5.292345 CGTACTCCTCATCTCCTATATGTCG 59.708 48.000 0.00 0.00 0.00 4.35
1995 2591 6.174760 ACGTACTCCTCATCTCCTATATGTC 58.825 44.000 0.00 0.00 0.00 3.06
1996 2592 6.129414 ACGTACTCCTCATCTCCTATATGT 57.871 41.667 0.00 0.00 0.00 2.29
1997 2593 7.442969 GGATACGTACTCCTCATCTCCTATATG 59.557 44.444 13.59 0.00 0.00 1.78
1998 2594 7.420446 GGGATACGTACTCCTCATCTCCTATAT 60.420 44.444 17.82 0.00 33.05 0.86
1999 2595 6.126825 GGGATACGTACTCCTCATCTCCTATA 60.127 46.154 17.82 0.00 33.05 1.31
2000 2596 5.339365 GGGATACGTACTCCTCATCTCCTAT 60.339 48.000 17.82 0.00 33.05 2.57
2001 2597 4.019501 GGGATACGTACTCCTCATCTCCTA 60.020 50.000 17.82 0.00 33.05 2.94
2002 2598 3.244981 GGGATACGTACTCCTCATCTCCT 60.245 52.174 17.82 0.00 33.05 3.69
2003 2599 3.083293 GGGATACGTACTCCTCATCTCC 58.917 54.545 17.82 9.70 33.05 3.71
2004 2600 3.752665 TGGGATACGTACTCCTCATCTC 58.247 50.000 17.82 4.99 33.05 2.75
2005 2601 3.878237 TGGGATACGTACTCCTCATCT 57.122 47.619 17.82 0.00 33.05 2.90
2006 2602 3.890147 AGTTGGGATACGTACTCCTCATC 59.110 47.826 17.82 13.87 33.05 2.92
2007 2603 3.912248 AGTTGGGATACGTACTCCTCAT 58.088 45.455 17.82 0.00 33.05 2.90
2008 2604 3.377253 AGTTGGGATACGTACTCCTCA 57.623 47.619 17.82 13.23 33.05 3.86
2009 2605 5.647225 CCTATAGTTGGGATACGTACTCCTC 59.353 48.000 17.82 5.06 33.57 3.71
2010 2606 5.568392 CCTATAGTTGGGATACGTACTCCT 58.432 45.833 17.82 6.46 33.57 3.69
2011 2607 5.893897 CCTATAGTTGGGATACGTACTCC 57.106 47.826 0.00 6.47 33.57 3.85
2035 2631 1.335132 TTATGACGGCAGACCCTCCC 61.335 60.000 0.00 0.00 0.00 4.30
2036 2632 0.759346 ATTATGACGGCAGACCCTCC 59.241 55.000 0.00 0.00 0.00 4.30
2037 2633 1.541233 CCATTATGACGGCAGACCCTC 60.541 57.143 0.00 0.00 0.00 4.30
2038 2634 0.469917 CCATTATGACGGCAGACCCT 59.530 55.000 0.00 0.00 0.00 4.34
2039 2635 0.180406 ACCATTATGACGGCAGACCC 59.820 55.000 0.00 0.00 0.00 4.46
2040 2636 2.038387 AACCATTATGACGGCAGACC 57.962 50.000 0.00 0.00 0.00 3.85
2041 2637 2.870411 GGTAACCATTATGACGGCAGAC 59.130 50.000 0.00 0.00 0.00 3.51
2042 2638 2.502130 TGGTAACCATTATGACGGCAGA 59.498 45.455 0.00 0.00 0.00 4.26
2043 2639 2.612212 GTGGTAACCATTATGACGGCAG 59.388 50.000 0.00 0.00 35.28 4.85
2044 2640 2.634600 GTGGTAACCATTATGACGGCA 58.365 47.619 0.00 0.00 35.28 5.69
2045 2641 1.944709 GGTGGTAACCATTATGACGGC 59.055 52.381 0.00 0.00 46.75 5.68
2057 2653 1.826096 GACAGGAGGAGAGGTGGTAAC 59.174 57.143 0.00 0.00 0.00 2.50
2058 2654 1.431633 TGACAGGAGGAGAGGTGGTAA 59.568 52.381 0.00 0.00 0.00 2.85
2059 2655 1.081481 TGACAGGAGGAGAGGTGGTA 58.919 55.000 0.00 0.00 0.00 3.25
2060 2656 0.543174 GTGACAGGAGGAGAGGTGGT 60.543 60.000 0.00 0.00 0.00 4.16
2061 2657 1.261238 GGTGACAGGAGGAGAGGTGG 61.261 65.000 0.00 0.00 0.00 4.61
2062 2658 0.252012 AGGTGACAGGAGGAGAGGTG 60.252 60.000 0.00 0.00 0.00 4.00
2063 2659 0.040499 GAGGTGACAGGAGGAGAGGT 59.960 60.000 0.00 0.00 0.00 3.85
2064 2660 0.334676 AGAGGTGACAGGAGGAGAGG 59.665 60.000 0.00 0.00 0.00 3.69
2065 2661 1.005332 TCAGAGGTGACAGGAGGAGAG 59.995 57.143 0.00 0.00 0.00 3.20
2066 2662 1.076438 TCAGAGGTGACAGGAGGAGA 58.924 55.000 0.00 0.00 0.00 3.71
2067 2663 1.755959 CATCAGAGGTGACAGGAGGAG 59.244 57.143 0.00 0.00 34.75 3.69
2068 2664 1.077828 ACATCAGAGGTGACAGGAGGA 59.922 52.381 0.00 0.00 34.75 3.71
2069 2665 1.566211 ACATCAGAGGTGACAGGAGG 58.434 55.000 0.00 0.00 34.75 4.30
2070 2666 3.692257 AAACATCAGAGGTGACAGGAG 57.308 47.619 0.00 0.00 34.75 3.69
2071 2667 4.437682 AAAAACATCAGAGGTGACAGGA 57.562 40.909 0.00 0.00 34.75 3.86
2117 2713 9.807921 TCTAACTTCTGATTTATTTCAAAGGGT 57.192 29.630 0.00 0.00 0.00 4.34
2124 2720 9.561270 GCTGGTTTCTAACTTCTGATTTATTTC 57.439 33.333 0.00 0.00 0.00 2.17
2125 2721 9.077885 TGCTGGTTTCTAACTTCTGATTTATTT 57.922 29.630 0.00 0.00 0.00 1.40
2126 2722 8.635765 TGCTGGTTTCTAACTTCTGATTTATT 57.364 30.769 0.00 0.00 0.00 1.40
2127 2723 8.814038 ATGCTGGTTTCTAACTTCTGATTTAT 57.186 30.769 0.00 0.00 0.00 1.40
2128 2724 9.733556 TTATGCTGGTTTCTAACTTCTGATTTA 57.266 29.630 0.00 0.00 0.00 1.40
2129 2725 8.635765 TTATGCTGGTTTCTAACTTCTGATTT 57.364 30.769 0.00 0.00 0.00 2.17
2130 2726 8.635765 TTTATGCTGGTTTCTAACTTCTGATT 57.364 30.769 0.00 0.00 0.00 2.57
2131 2727 7.337942 CCTTTATGCTGGTTTCTAACTTCTGAT 59.662 37.037 0.00 0.00 0.00 2.90
2132 2728 6.655003 CCTTTATGCTGGTTTCTAACTTCTGA 59.345 38.462 0.00 0.00 0.00 3.27
2133 2729 6.431234 ACCTTTATGCTGGTTTCTAACTTCTG 59.569 38.462 0.00 0.00 31.62 3.02
2134 2730 6.543735 ACCTTTATGCTGGTTTCTAACTTCT 58.456 36.000 0.00 0.00 31.62 2.85
2135 2731 6.819397 ACCTTTATGCTGGTTTCTAACTTC 57.181 37.500 0.00 0.00 31.62 3.01
2136 2732 8.700439 TTTACCTTTATGCTGGTTTCTAACTT 57.300 30.769 0.00 0.00 37.74 2.66
2137 2733 8.700439 TTTTACCTTTATGCTGGTTTCTAACT 57.300 30.769 0.00 0.00 37.74 2.24
2138 2734 9.353999 CATTTTACCTTTATGCTGGTTTCTAAC 57.646 33.333 0.00 0.00 37.74 2.34
2139 2735 9.084533 ACATTTTACCTTTATGCTGGTTTCTAA 57.915 29.630 0.00 0.00 37.74 2.10
2140 2736 8.644374 ACATTTTACCTTTATGCTGGTTTCTA 57.356 30.769 0.00 0.00 37.74 2.10
2141 2737 7.539034 ACATTTTACCTTTATGCTGGTTTCT 57.461 32.000 0.00 0.00 37.74 2.52
2142 2738 8.495148 CAAACATTTTACCTTTATGCTGGTTTC 58.505 33.333 0.00 0.00 37.74 2.78
2143 2739 8.207545 TCAAACATTTTACCTTTATGCTGGTTT 58.792 29.630 0.00 0.00 37.74 3.27
2144 2740 7.731054 TCAAACATTTTACCTTTATGCTGGTT 58.269 30.769 0.00 0.00 37.74 3.67
2145 2741 7.296628 TCAAACATTTTACCTTTATGCTGGT 57.703 32.000 0.00 0.00 40.12 4.00
2146 2742 8.776376 AATCAAACATTTTACCTTTATGCTGG 57.224 30.769 0.00 0.00 0.00 4.85
2147 2743 8.586273 CGAATCAAACATTTTACCTTTATGCTG 58.414 33.333 0.00 0.00 0.00 4.41
2148 2744 7.759433 CCGAATCAAACATTTTACCTTTATGCT 59.241 33.333 0.00 0.00 0.00 3.79
2149 2745 7.544217 ACCGAATCAAACATTTTACCTTTATGC 59.456 33.333 0.00 0.00 0.00 3.14
2150 2746 8.980143 ACCGAATCAAACATTTTACCTTTATG 57.020 30.769 0.00 0.00 0.00 1.90
2151 2747 9.990360 AAACCGAATCAAACATTTTACCTTTAT 57.010 25.926 0.00 0.00 0.00 1.40
2152 2748 9.819267 AAAACCGAATCAAACATTTTACCTTTA 57.181 25.926 0.00 0.00 0.00 1.85
2153 2749 8.725405 AAAACCGAATCAAACATTTTACCTTT 57.275 26.923 0.00 0.00 0.00 3.11
2154 2750 8.725405 AAAAACCGAATCAAACATTTTACCTT 57.275 26.923 0.00 0.00 0.00 3.50
2179 2775 2.281900 ACGCGGGGCTAGCAAAAA 60.282 55.556 18.24 0.00 34.19 1.94
2180 2776 2.744709 GACGCGGGGCTAGCAAAA 60.745 61.111 18.24 0.00 34.19 2.44
2213 2809 2.246761 TATGGTTTCCACCCGAGCCG 62.247 60.000 0.00 0.00 43.49 5.52
2214 2810 0.463833 CTATGGTTTCCACCCGAGCC 60.464 60.000 0.00 0.00 43.49 4.70
2215 2811 1.095807 GCTATGGTTTCCACCCGAGC 61.096 60.000 0.00 0.34 43.49 5.03
2216 2812 0.463833 GGCTATGGTTTCCACCCGAG 60.464 60.000 0.00 0.00 43.49 4.63
2217 2813 1.605453 GGCTATGGTTTCCACCCGA 59.395 57.895 0.00 0.00 43.49 5.14
2218 2814 1.453197 GGGCTATGGTTTCCACCCG 60.453 63.158 0.00 0.00 43.49 5.28
2219 2815 1.076265 GGGGCTATGGTTTCCACCC 60.076 63.158 4.87 4.87 43.49 4.61
2220 2816 1.076265 GGGGGCTATGGTTTCCACC 60.076 63.158 0.00 0.00 44.56 4.61
2221 2817 1.453197 CGGGGGCTATGGTTTCCAC 60.453 63.158 0.00 0.00 35.80 4.02
2222 2818 3.003230 CGGGGGCTATGGTTTCCA 58.997 61.111 0.00 0.00 38.19 3.53
2223 2819 2.518587 GCGGGGGCTATGGTTTCC 60.519 66.667 0.00 0.00 0.00 3.13
2224 2820 2.518587 GGCGGGGGCTATGGTTTC 60.519 66.667 0.00 0.00 0.00 2.78
2225 2821 4.499633 CGGCGGGGGCTATGGTTT 62.500 66.667 0.00 0.00 0.00 3.27
2240 2836 3.499737 GATGAACGTGCCTGGCGG 61.500 66.667 14.98 11.08 0.00 6.13
2241 2837 3.499737 GGATGAACGTGCCTGGCG 61.500 66.667 14.98 2.80 0.00 5.69
2242 2838 2.045926 AGGATGAACGTGCCTGGC 60.046 61.111 12.87 12.87 0.00 4.85
2243 2839 1.450312 GGAGGATGAACGTGCCTGG 60.450 63.158 4.50 0.00 30.70 4.45
2244 2840 1.450312 GGGAGGATGAACGTGCCTG 60.450 63.158 4.50 0.00 40.76 4.85
2245 2841 2.670148 GGGGAGGATGAACGTGCCT 61.670 63.158 0.00 0.00 42.91 4.75
2246 2842 2.124695 GGGGAGGATGAACGTGCC 60.125 66.667 0.00 0.00 42.68 5.01
2247 2843 0.744771 GAAGGGGAGGATGAACGTGC 60.745 60.000 0.00 0.00 0.00 5.34
2248 2844 0.107654 GGAAGGGGAGGATGAACGTG 60.108 60.000 0.00 0.00 0.00 4.49
2249 2845 1.272554 GGGAAGGGGAGGATGAACGT 61.273 60.000 0.00 0.00 0.00 3.99
2250 2846 1.527370 GGGAAGGGGAGGATGAACG 59.473 63.158 0.00 0.00 0.00 3.95
2251 2847 0.624795 AGGGGAAGGGGAGGATGAAC 60.625 60.000 0.00 0.00 0.00 3.18
2252 2848 0.327576 GAGGGGAAGGGGAGGATGAA 60.328 60.000 0.00 0.00 0.00 2.57
2253 2849 1.318380 GAGGGGAAGGGGAGGATGA 59.682 63.158 0.00 0.00 0.00 2.92
2254 2850 1.772156 GGAGGGGAAGGGGAGGATG 60.772 68.421 0.00 0.00 0.00 3.51
2255 2851 2.712746 GGAGGGGAAGGGGAGGAT 59.287 66.667 0.00 0.00 0.00 3.24
2256 2852 4.089757 CGGAGGGGAAGGGGAGGA 62.090 72.222 0.00 0.00 0.00 3.71
2268 2864 3.905678 CTCTAGCGGTGGCGGAGG 61.906 72.222 0.00 0.00 46.35 4.30
2269 2865 3.905678 CCTCTAGCGGTGGCGGAG 61.906 72.222 0.00 1.94 46.35 4.63
2270 2866 4.435970 TCCTCTAGCGGTGGCGGA 62.436 66.667 5.51 5.51 46.35 5.54
2271 2867 3.905678 CTCCTCTAGCGGTGGCGG 61.906 72.222 0.00 0.00 46.35 6.13
2272 2868 3.905678 CCTCCTCTAGCGGTGGCG 61.906 72.222 6.92 0.00 46.35 5.69
2273 2869 2.760385 ACCTCCTCTAGCGGTGGC 60.760 66.667 17.85 0.00 40.56 5.01
2274 2870 2.482333 CGACCTCCTCTAGCGGTGG 61.482 68.421 16.62 16.62 42.18 4.61
2275 2871 1.451567 TCGACCTCCTCTAGCGGTG 60.452 63.158 0.00 0.00 0.00 4.94
2276 2872 1.451747 GTCGACCTCCTCTAGCGGT 60.452 63.158 3.51 0.00 0.00 5.68
2277 2873 2.535788 CGTCGACCTCCTCTAGCGG 61.536 68.421 10.58 0.00 0.00 5.52
2278 2874 2.535788 CCGTCGACCTCCTCTAGCG 61.536 68.421 10.58 0.00 0.00 4.26
2279 2875 2.188161 CCCGTCGACCTCCTCTAGC 61.188 68.421 10.58 0.00 0.00 3.42
2280 2876 2.188161 GCCCGTCGACCTCCTCTAG 61.188 68.421 10.58 0.00 0.00 2.43
2281 2877 2.124403 GCCCGTCGACCTCCTCTA 60.124 66.667 10.58 0.00 0.00 2.43
2302 2898 2.203209 CTATCAACCGCCTGGGGC 60.203 66.667 5.02 0.00 46.75 5.80
2303 2899 2.203209 GCTATCAACCGCCTGGGG 60.203 66.667 3.33 3.33 41.60 4.96
2304 2900 2.588877 CGCTATCAACCGCCTGGG 60.589 66.667 0.00 0.00 40.75 4.45
2305 2901 2.588877 CCGCTATCAACCGCCTGG 60.589 66.667 0.00 0.00 42.84 4.45
2306 2902 3.272334 GCCGCTATCAACCGCCTG 61.272 66.667 0.00 0.00 0.00 4.85
2307 2903 4.891727 CGCCGCTATCAACCGCCT 62.892 66.667 0.00 0.00 0.00 5.52
2310 2906 2.960129 GACCGCCGCTATCAACCG 60.960 66.667 0.00 0.00 0.00 4.44
2311 2907 2.960129 CGACCGCCGCTATCAACC 60.960 66.667 0.00 0.00 0.00 3.77
2312 2908 1.944676 CTCGACCGCCGCTATCAAC 60.945 63.158 0.00 0.00 38.37 3.18
2313 2909 2.411701 CTCGACCGCCGCTATCAA 59.588 61.111 0.00 0.00 38.37 2.57
2314 2910 3.592814 CCTCGACCGCCGCTATCA 61.593 66.667 0.00 0.00 38.37 2.15
2321 2917 3.418744 GAAGAGAGCCTCGACCGCC 62.419 68.421 0.00 0.00 35.36 6.13
2322 2918 2.103340 GAAGAGAGCCTCGACCGC 59.897 66.667 0.00 0.00 35.36 5.68
2323 2919 0.746563 AGAGAAGAGAGCCTCGACCG 60.747 60.000 0.00 0.00 35.36 4.79
2324 2920 1.404035 GAAGAGAAGAGAGCCTCGACC 59.596 57.143 0.00 0.00 35.36 4.79
2325 2921 1.404035 GGAAGAGAAGAGAGCCTCGAC 59.596 57.143 0.00 0.00 35.36 4.20
2326 2922 1.683629 GGGAAGAGAAGAGAGCCTCGA 60.684 57.143 0.00 0.00 35.36 4.04
2327 2923 0.744281 GGGAAGAGAAGAGAGCCTCG 59.256 60.000 0.00 0.00 35.36 4.63
2328 2924 2.031870 GAGGGAAGAGAAGAGAGCCTC 58.968 57.143 0.00 0.00 0.00 4.70
2329 2925 1.342975 GGAGGGAAGAGAAGAGAGCCT 60.343 57.143 0.00 0.00 0.00 4.58
2330 2926 1.119684 GGAGGGAAGAGAAGAGAGCC 58.880 60.000 0.00 0.00 0.00 4.70
2331 2927 1.119684 GGGAGGGAAGAGAAGAGAGC 58.880 60.000 0.00 0.00 0.00 4.09
2332 2928 1.398692 CGGGAGGGAAGAGAAGAGAG 58.601 60.000 0.00 0.00 0.00 3.20
2333 2929 0.684805 GCGGGAGGGAAGAGAAGAGA 60.685 60.000 0.00 0.00 0.00 3.10
2334 2930 1.819905 GCGGGAGGGAAGAGAAGAG 59.180 63.158 0.00 0.00 0.00 2.85
2335 2931 4.035843 GCGGGAGGGAAGAGAAGA 57.964 61.111 0.00 0.00 0.00 2.87
2353 2949 4.899239 CCGCCTCACCGATCTGGC 62.899 72.222 3.85 0.00 43.94 4.85
2354 2950 4.227134 CCCGCCTCACCGATCTGG 62.227 72.222 2.55 2.55 46.41 3.86
2355 2951 3.432051 GACCCGCCTCACCGATCTG 62.432 68.421 0.00 0.00 0.00 2.90
2356 2952 3.148279 GACCCGCCTCACCGATCT 61.148 66.667 0.00 0.00 0.00 2.75
2357 2953 3.458163 TGACCCGCCTCACCGATC 61.458 66.667 0.00 0.00 0.00 3.69
2358 2954 3.771160 GTGACCCGCCTCACCGAT 61.771 66.667 0.33 0.00 35.44 4.18
2388 2984 1.212935 TGCAGATTAGGGGAAAGCTCC 59.787 52.381 0.00 0.00 41.59 4.70
2389 2985 2.717639 TGCAGATTAGGGGAAAGCTC 57.282 50.000 0.00 0.00 0.00 4.09
2390 2986 2.486191 CGATGCAGATTAGGGGAAAGCT 60.486 50.000 0.00 0.00 0.00 3.74
2391 2987 1.876156 CGATGCAGATTAGGGGAAAGC 59.124 52.381 0.00 0.00 0.00 3.51
2392 2988 1.876156 GCGATGCAGATTAGGGGAAAG 59.124 52.381 0.00 0.00 0.00 2.62
2393 2989 1.810031 CGCGATGCAGATTAGGGGAAA 60.810 52.381 0.00 0.00 0.00 3.13
2394 2990 0.249868 CGCGATGCAGATTAGGGGAA 60.250 55.000 0.00 0.00 0.00 3.97
2395 2991 1.367471 CGCGATGCAGATTAGGGGA 59.633 57.895 0.00 0.00 0.00 4.81
2396 2992 1.669115 CCGCGATGCAGATTAGGGG 60.669 63.158 8.23 0.00 0.00 4.79
2397 2993 3.957260 CCGCGATGCAGATTAGGG 58.043 61.111 8.23 0.00 0.00 3.53
2725 3321 1.519455 CCGACGCCACCAGATCTTC 60.519 63.158 0.00 0.00 0.00 2.87
2726 3322 2.227089 GACCGACGCCACCAGATCTT 62.227 60.000 0.00 0.00 0.00 2.40
2727 3323 2.680352 ACCGACGCCACCAGATCT 60.680 61.111 0.00 0.00 0.00 2.75
2728 3324 2.202756 GACCGACGCCACCAGATC 60.203 66.667 0.00 0.00 0.00 2.75
2729 3325 4.129737 CGACCGACGCCACCAGAT 62.130 66.667 0.00 0.00 34.51 2.90
2731 3327 4.657824 AACGACCGACGCCACCAG 62.658 66.667 0.00 0.00 46.94 4.00
2732 3328 4.651008 GAACGACCGACGCCACCA 62.651 66.667 0.00 0.00 46.94 4.17
2734 3330 3.958822 ATCGAACGACCGACGCCAC 62.959 63.158 6.11 0.00 46.94 5.01
2735 3331 3.740397 ATCGAACGACCGACGCCA 61.740 61.111 6.11 0.00 46.94 5.69
2736 3332 3.245315 CATCGAACGACCGACGCC 61.245 66.667 6.11 0.00 46.94 5.68
2737 3333 3.245315 CCATCGAACGACCGACGC 61.245 66.667 6.11 0.00 46.94 5.19
2739 3335 2.884207 GCCCATCGAACGACCGAC 60.884 66.667 6.11 0.00 41.70 4.79
2740 3336 3.060020 GAGCCCATCGAACGACCGA 62.060 63.158 0.00 6.40 43.16 4.69
2741 3337 2.582498 GAGCCCATCGAACGACCG 60.582 66.667 0.00 0.00 0.00 4.79
2750 3346 1.153086 ATGACCTTGCGAGCCCATC 60.153 57.895 0.00 0.00 0.00 3.51
2751 3347 1.452651 CATGACCTTGCGAGCCCAT 60.453 57.895 0.00 0.00 0.00 4.00
2752 3348 2.046023 CATGACCTTGCGAGCCCA 60.046 61.111 0.00 0.00 0.00 5.36
2753 3349 2.825836 CCATGACCTTGCGAGCCC 60.826 66.667 0.00 0.00 0.00 5.19
2754 3350 3.512516 GCCATGACCTTGCGAGCC 61.513 66.667 0.00 0.00 0.00 4.70
2760 3356 2.361610 AAGGCCGCCATGACCTTG 60.362 61.111 13.15 0.00 42.21 3.61
2761 3357 2.361610 CAAGGCCGCCATGACCTT 60.362 61.111 13.15 0.00 44.66 3.50
2762 3358 4.431131 CCAAGGCCGCCATGACCT 62.431 66.667 16.28 0.00 34.45 3.85
2763 3359 4.740822 ACCAAGGCCGCCATGACC 62.741 66.667 16.28 0.00 0.00 4.02
2764 3360 3.134127 GACCAAGGCCGCCATGAC 61.134 66.667 16.28 6.18 0.00 3.06
2765 3361 4.776322 CGACCAAGGCCGCCATGA 62.776 66.667 16.28 0.00 0.00 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.