Multiple sequence alignment - TraesCS5A01G332800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G332800 chr5A 100.000 2420 0 0 1 2420 541934832 541937251 0.000000e+00 4470
1 TraesCS5A01G332800 chr5A 82.137 571 64 17 940 1485 542002143 542001586 2.840000e-124 455
2 TraesCS5A01G332800 chr5D 92.131 1131 47 5 567 1680 427519283 427520388 0.000000e+00 1557
3 TraesCS5A01G332800 chr5D 90.577 520 35 8 1904 2413 427520677 427521192 0.000000e+00 676
4 TraesCS5A01G332800 chr5B 92.715 1057 43 12 592 1641 517192213 517193242 0.000000e+00 1495
5 TraesCS5A01G332800 chr5B 91.747 521 38 3 1904 2420 517193681 517194200 0.000000e+00 719
6 TraesCS5A01G332800 chr5B 77.485 684 74 28 838 1485 517208921 517208282 1.070000e-88 337
7 TraesCS5A01G332800 chr5B 88.462 208 24 0 4 211 696641320 696641527 3.990000e-63 252
8 TraesCS5A01G332800 chr4A 95.635 252 10 1 267 517 641546525 641546274 1.040000e-108 403
9 TraesCS5A01G332800 chr1A 95.635 252 10 1 267 517 73312420 73312169 1.040000e-108 403
10 TraesCS5A01G332800 chr1A 94.841 252 12 1 267 517 571583109 571583360 2.260000e-105 392
11 TraesCS5A01G332800 chr1A 93.156 263 16 2 256 517 552282471 552282732 3.770000e-103 385
12 TraesCS5A01G332800 chr6A 93.704 270 12 5 250 517 524227942 524227676 1.350000e-107 399
13 TraesCS5A01G332800 chr6A 93.704 270 12 5 250 517 524252875 524253141 1.350000e-107 399
14 TraesCS5A01G332800 chr2A 94.595 259 12 2 263 519 763842798 763843056 1.350000e-107 399
15 TraesCS5A01G332800 chr2A 93.233 266 15 3 263 526 602483468 602483732 2.920000e-104 388
16 TraesCS5A01G332800 chr3A 93.657 268 14 3 267 532 474832821 474832555 4.850000e-107 398
17 TraesCS5A01G332800 chr6B 92.381 210 16 0 1 210 133367765 133367974 1.410000e-77 300
18 TraesCS5A01G332800 chr1B 92.381 210 16 0 1 210 164580327 164580536 1.410000e-77 300
19 TraesCS5A01G332800 chr7B 91.262 206 18 0 6 211 749592751 749592546 5.090000e-72 281
20 TraesCS5A01G332800 chr3D 88.732 213 24 0 1 213 85074036 85073824 6.640000e-66 261
21 TraesCS5A01G332800 chr2B 89.268 205 22 0 1 205 5812832 5813036 8.580000e-65 257
22 TraesCS5A01G332800 chr2B 87.500 208 26 0 4 211 734407010 734406803 8.650000e-60 241


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G332800 chr5A 541934832 541937251 2419 False 4470.0 4470 100.000 1 2420 1 chr5A.!!$F1 2419
1 TraesCS5A01G332800 chr5A 542001586 542002143 557 True 455.0 455 82.137 940 1485 1 chr5A.!!$R1 545
2 TraesCS5A01G332800 chr5D 427519283 427521192 1909 False 1116.5 1557 91.354 567 2413 2 chr5D.!!$F1 1846
3 TraesCS5A01G332800 chr5B 517192213 517194200 1987 False 1107.0 1495 92.231 592 2420 2 chr5B.!!$F2 1828
4 TraesCS5A01G332800 chr5B 517208282 517208921 639 True 337.0 337 77.485 838 1485 1 chr5B.!!$R1 647

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
164 165 0.034756 AAAAATTTGCGGTGCCTCCC 59.965 50.0 0.0 0.0 0.0 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1463 1521 0.107848 AGATAGGGGGAAACAACGCG 60.108 55.0 3.53 3.53 0.0 6.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.362556 TTGCACTGAAGAAAATGCTAGAC 57.637 39.130 0.00 0.00 38.90 2.59
23 24 4.645535 TGCACTGAAGAAAATGCTAGACT 58.354 39.130 0.00 0.00 38.90 3.24
24 25 5.065914 TGCACTGAAGAAAATGCTAGACTT 58.934 37.500 0.00 0.00 38.90 3.01
25 26 5.532406 TGCACTGAAGAAAATGCTAGACTTT 59.468 36.000 0.00 0.00 38.90 2.66
26 27 5.855395 GCACTGAAGAAAATGCTAGACTTTG 59.145 40.000 0.00 0.00 35.16 2.77
27 28 5.855395 CACTGAAGAAAATGCTAGACTTTGC 59.145 40.000 0.00 0.00 0.00 3.68
28 29 5.532406 ACTGAAGAAAATGCTAGACTTTGCA 59.468 36.000 0.00 5.50 43.67 4.08
37 38 4.253685 TGCTAGACTTTGCATCACTAACC 58.746 43.478 0.00 0.00 33.94 2.85
38 39 4.253685 GCTAGACTTTGCATCACTAACCA 58.746 43.478 0.00 0.00 0.00 3.67
39 40 4.695455 GCTAGACTTTGCATCACTAACCAA 59.305 41.667 0.00 0.00 0.00 3.67
40 41 5.355350 GCTAGACTTTGCATCACTAACCAAT 59.645 40.000 0.00 0.00 0.00 3.16
41 42 6.127897 GCTAGACTTTGCATCACTAACCAATT 60.128 38.462 0.00 0.00 0.00 2.32
42 43 6.017400 AGACTTTGCATCACTAACCAATTG 57.983 37.500 0.00 0.00 0.00 2.32
43 44 5.769662 AGACTTTGCATCACTAACCAATTGA 59.230 36.000 7.12 0.00 0.00 2.57
44 45 5.772521 ACTTTGCATCACTAACCAATTGAC 58.227 37.500 7.12 0.00 0.00 3.18
45 46 4.782019 TTGCATCACTAACCAATTGACC 57.218 40.909 7.12 0.00 0.00 4.02
46 47 4.032960 TGCATCACTAACCAATTGACCT 57.967 40.909 7.12 0.00 0.00 3.85
47 48 3.758023 TGCATCACTAACCAATTGACCTG 59.242 43.478 7.12 0.00 0.00 4.00
48 49 4.009675 GCATCACTAACCAATTGACCTGA 58.990 43.478 7.12 0.74 0.00 3.86
49 50 4.458989 GCATCACTAACCAATTGACCTGAA 59.541 41.667 7.12 0.00 0.00 3.02
50 51 5.619981 GCATCACTAACCAATTGACCTGAAC 60.620 44.000 7.12 0.00 0.00 3.18
51 52 5.304686 TCACTAACCAATTGACCTGAACT 57.695 39.130 7.12 0.00 0.00 3.01
52 53 5.690865 TCACTAACCAATTGACCTGAACTT 58.309 37.500 7.12 0.00 0.00 2.66
53 54 5.530915 TCACTAACCAATTGACCTGAACTTG 59.469 40.000 7.12 0.00 0.00 3.16
54 55 3.733443 AACCAATTGACCTGAACTTGC 57.267 42.857 7.12 0.00 0.00 4.01
55 56 2.665165 ACCAATTGACCTGAACTTGCA 58.335 42.857 7.12 0.00 0.00 4.08
56 57 2.362077 ACCAATTGACCTGAACTTGCAC 59.638 45.455 7.12 0.00 0.00 4.57
57 58 2.361757 CCAATTGACCTGAACTTGCACA 59.638 45.455 7.12 0.00 0.00 4.57
58 59 3.181477 CCAATTGACCTGAACTTGCACAA 60.181 43.478 7.12 0.00 0.00 3.33
59 60 4.501915 CCAATTGACCTGAACTTGCACAAT 60.502 41.667 7.12 0.00 0.00 2.71
60 61 5.278907 CCAATTGACCTGAACTTGCACAATA 60.279 40.000 7.12 0.00 0.00 1.90
61 62 5.633830 ATTGACCTGAACTTGCACAATAG 57.366 39.130 0.00 0.00 0.00 1.73
62 63 4.085357 TGACCTGAACTTGCACAATAGT 57.915 40.909 0.00 0.00 0.00 2.12
63 64 4.065088 TGACCTGAACTTGCACAATAGTC 58.935 43.478 0.00 0.00 0.00 2.59
64 65 4.065088 GACCTGAACTTGCACAATAGTCA 58.935 43.478 0.00 0.00 0.00 3.41
65 66 4.655963 ACCTGAACTTGCACAATAGTCAT 58.344 39.130 0.00 0.00 0.00 3.06
66 67 4.697352 ACCTGAACTTGCACAATAGTCATC 59.303 41.667 0.00 0.00 0.00 2.92
67 68 4.201753 CCTGAACTTGCACAATAGTCATCG 60.202 45.833 0.00 0.00 0.00 3.84
68 69 4.565022 TGAACTTGCACAATAGTCATCGA 58.435 39.130 0.00 0.00 0.00 3.59
69 70 4.627035 TGAACTTGCACAATAGTCATCGAG 59.373 41.667 0.00 0.00 0.00 4.04
70 71 2.932614 ACTTGCACAATAGTCATCGAGC 59.067 45.455 0.00 0.00 0.00 5.03
71 72 2.671130 TGCACAATAGTCATCGAGCA 57.329 45.000 0.00 0.00 0.00 4.26
72 73 2.270923 TGCACAATAGTCATCGAGCAC 58.729 47.619 0.00 0.00 0.00 4.40
73 74 1.594862 GCACAATAGTCATCGAGCACC 59.405 52.381 0.00 0.00 0.00 5.01
74 75 2.205074 CACAATAGTCATCGAGCACCC 58.795 52.381 0.00 0.00 0.00 4.61
75 76 2.111384 ACAATAGTCATCGAGCACCCT 58.889 47.619 0.00 0.00 0.00 4.34
76 77 2.501723 ACAATAGTCATCGAGCACCCTT 59.498 45.455 0.00 0.00 0.00 3.95
77 78 3.126831 CAATAGTCATCGAGCACCCTTC 58.873 50.000 0.00 0.00 0.00 3.46
78 79 0.738975 TAGTCATCGAGCACCCTTCG 59.261 55.000 0.00 0.00 39.33 3.79
82 83 4.090723 TCGAGCACCCTTCGAAGA 57.909 55.556 26.61 0.70 43.39 2.87
83 84 1.585006 TCGAGCACCCTTCGAAGAC 59.415 57.895 26.61 12.27 43.39 3.01
84 85 1.176619 TCGAGCACCCTTCGAAGACA 61.177 55.000 26.61 0.00 43.39 3.41
85 86 1.009389 CGAGCACCCTTCGAAGACAC 61.009 60.000 26.61 12.26 40.36 3.67
86 87 1.006102 AGCACCCTTCGAAGACACG 60.006 57.895 26.61 12.26 34.32 4.49
87 88 2.668280 GCACCCTTCGAAGACACGC 61.668 63.158 26.61 17.73 34.32 5.34
88 89 2.027625 CACCCTTCGAAGACACGCC 61.028 63.158 26.61 0.00 34.32 5.68
89 90 2.809601 CCCTTCGAAGACACGCCG 60.810 66.667 26.61 7.51 34.32 6.46
90 91 3.479269 CCTTCGAAGACACGCCGC 61.479 66.667 26.61 0.00 34.32 6.53
91 92 3.827784 CTTCGAAGACACGCCGCG 61.828 66.667 20.74 12.14 34.32 6.46
92 93 4.634133 TTCGAAGACACGCCGCGT 62.634 61.111 13.85 13.85 42.36 6.01
93 94 4.634133 TCGAAGACACGCCGCGTT 62.634 61.111 17.45 8.01 38.32 4.84
94 95 4.409588 CGAAGACACGCCGCGTTG 62.410 66.667 17.45 14.09 38.32 4.10
95 96 4.072088 GAAGACACGCCGCGTTGG 62.072 66.667 17.45 8.81 38.32 3.77
108 109 2.679996 GTTGGGGCCATCCGCTTT 60.680 61.111 4.39 0.00 44.90 3.51
109 110 2.362375 TTGGGGCCATCCGCTTTC 60.362 61.111 4.39 0.00 44.90 2.62
110 111 3.216985 TTGGGGCCATCCGCTTTCA 62.217 57.895 4.39 0.00 44.90 2.69
111 112 2.123726 GGGGCCATCCGCTTTCAT 60.124 61.111 4.39 0.00 41.69 2.57
112 113 1.758122 GGGGCCATCCGCTTTCATT 60.758 57.895 4.39 0.00 41.69 2.57
113 114 0.467290 GGGGCCATCCGCTTTCATTA 60.467 55.000 4.39 0.00 41.69 1.90
114 115 1.398692 GGGCCATCCGCTTTCATTAA 58.601 50.000 4.39 0.00 37.74 1.40
115 116 1.338020 GGGCCATCCGCTTTCATTAAG 59.662 52.381 4.39 0.00 37.74 1.85
116 117 2.297701 GGCCATCCGCTTTCATTAAGA 58.702 47.619 0.00 0.00 35.80 2.10
117 118 2.887152 GGCCATCCGCTTTCATTAAGAT 59.113 45.455 0.00 0.00 35.80 2.40
118 119 3.057946 GGCCATCCGCTTTCATTAAGATC 60.058 47.826 0.00 0.00 35.80 2.75
119 120 3.565482 GCCATCCGCTTTCATTAAGATCA 59.435 43.478 0.00 0.00 35.80 2.92
120 121 4.036734 GCCATCCGCTTTCATTAAGATCAA 59.963 41.667 0.00 0.00 35.80 2.57
121 122 5.450412 GCCATCCGCTTTCATTAAGATCAAA 60.450 40.000 0.00 0.00 35.80 2.69
122 123 6.204359 CCATCCGCTTTCATTAAGATCAAAG 58.796 40.000 0.00 0.00 35.80 2.77
123 124 6.038603 CCATCCGCTTTCATTAAGATCAAAGA 59.961 38.462 5.41 0.00 35.80 2.52
124 125 7.415541 CCATCCGCTTTCATTAAGATCAAAGAA 60.416 37.037 5.41 0.00 35.80 2.52
125 126 7.630242 TCCGCTTTCATTAAGATCAAAGAAT 57.370 32.000 5.41 0.00 35.80 2.40
126 127 7.697691 TCCGCTTTCATTAAGATCAAAGAATC 58.302 34.615 5.41 0.00 35.80 2.52
127 128 7.336679 TCCGCTTTCATTAAGATCAAAGAATCA 59.663 33.333 5.41 0.00 35.80 2.57
128 129 8.133627 CCGCTTTCATTAAGATCAAAGAATCAT 58.866 33.333 5.41 0.00 35.80 2.45
129 130 9.167239 CGCTTTCATTAAGATCAAAGAATCATC 57.833 33.333 5.41 0.00 35.80 2.92
130 131 9.167239 GCTTTCATTAAGATCAAAGAATCATCG 57.833 33.333 5.41 0.00 35.80 3.84
131 132 9.661187 CTTTCATTAAGATCAAAGAATCATCGG 57.339 33.333 0.00 0.00 35.80 4.18
132 133 7.194607 TCATTAAGATCAAAGAATCATCGGC 57.805 36.000 0.00 0.00 0.00 5.54
133 134 5.657470 TTAAGATCAAAGAATCATCGGCG 57.343 39.130 0.00 0.00 0.00 6.46
134 135 3.459232 AGATCAAAGAATCATCGGCGA 57.541 42.857 13.87 13.87 0.00 5.54
135 136 3.797039 AGATCAAAGAATCATCGGCGAA 58.203 40.909 15.93 0.00 0.00 4.70
136 137 4.191544 AGATCAAAGAATCATCGGCGAAA 58.808 39.130 15.93 5.61 0.00 3.46
137 138 4.635765 AGATCAAAGAATCATCGGCGAAAA 59.364 37.500 15.93 5.17 0.00 2.29
138 139 4.340894 TCAAAGAATCATCGGCGAAAAG 57.659 40.909 15.93 7.40 0.00 2.27
160 161 3.553532 CAAATGAAAAATTTGCGGTGCC 58.446 40.909 0.00 0.00 33.07 5.01
161 162 2.837532 ATGAAAAATTTGCGGTGCCT 57.162 40.000 0.00 0.00 0.00 4.75
162 163 2.147436 TGAAAAATTTGCGGTGCCTC 57.853 45.000 0.00 0.00 0.00 4.70
163 164 1.270041 TGAAAAATTTGCGGTGCCTCC 60.270 47.619 0.00 0.00 0.00 4.30
164 165 0.034756 AAAAATTTGCGGTGCCTCCC 59.965 50.000 0.00 0.00 0.00 4.30
165 166 0.831711 AAAATTTGCGGTGCCTCCCT 60.832 50.000 0.00 0.00 0.00 4.20
166 167 0.039035 AAATTTGCGGTGCCTCCCTA 59.961 50.000 0.00 0.00 0.00 3.53
167 168 0.679960 AATTTGCGGTGCCTCCCTAC 60.680 55.000 0.00 0.00 0.00 3.18
168 169 1.847798 ATTTGCGGTGCCTCCCTACA 61.848 55.000 0.00 0.00 0.00 2.74
169 170 1.847798 TTTGCGGTGCCTCCCTACAT 61.848 55.000 0.00 0.00 0.00 2.29
170 171 0.978667 TTGCGGTGCCTCCCTACATA 60.979 55.000 0.00 0.00 0.00 2.29
171 172 1.069258 GCGGTGCCTCCCTACATAC 59.931 63.158 0.00 0.00 0.00 2.39
172 173 1.400530 GCGGTGCCTCCCTACATACT 61.401 60.000 0.00 0.00 0.00 2.12
173 174 1.120530 CGGTGCCTCCCTACATACTT 58.879 55.000 0.00 0.00 0.00 2.24
174 175 1.202533 CGGTGCCTCCCTACATACTTG 60.203 57.143 0.00 0.00 0.00 3.16
175 176 1.141053 GGTGCCTCCCTACATACTTGG 59.859 57.143 0.00 0.00 0.00 3.61
176 177 2.116238 GTGCCTCCCTACATACTTGGA 58.884 52.381 0.00 0.00 0.00 3.53
177 178 2.116238 TGCCTCCCTACATACTTGGAC 58.884 52.381 0.00 0.00 0.00 4.02
178 179 1.416772 GCCTCCCTACATACTTGGACC 59.583 57.143 0.00 0.00 0.00 4.46
179 180 2.047830 CCTCCCTACATACTTGGACCC 58.952 57.143 0.00 0.00 0.00 4.46
180 181 2.047830 CTCCCTACATACTTGGACCCC 58.952 57.143 0.00 0.00 0.00 4.95
181 182 1.366787 TCCCTACATACTTGGACCCCA 59.633 52.381 0.00 0.00 0.00 4.96
182 183 2.201830 CCCTACATACTTGGACCCCAA 58.798 52.381 0.00 0.00 41.69 4.12
183 184 2.783510 CCCTACATACTTGGACCCCAAT 59.216 50.000 0.00 0.00 43.07 3.16
184 185 3.435026 CCCTACATACTTGGACCCCAATG 60.435 52.174 0.00 0.00 43.07 2.82
185 186 3.458118 CCTACATACTTGGACCCCAATGA 59.542 47.826 0.00 0.00 43.07 2.57
186 187 4.080015 CCTACATACTTGGACCCCAATGAA 60.080 45.833 0.00 0.00 43.07 2.57
187 188 3.697166 ACATACTTGGACCCCAATGAAC 58.303 45.455 0.00 0.00 43.07 3.18
188 189 2.483014 TACTTGGACCCCAATGAACG 57.517 50.000 0.00 0.00 43.07 3.95
189 190 0.768622 ACTTGGACCCCAATGAACGA 59.231 50.000 0.00 0.00 43.07 3.85
190 191 1.271379 ACTTGGACCCCAATGAACGAG 60.271 52.381 0.00 0.00 43.07 4.18
191 192 0.768622 TTGGACCCCAATGAACGAGT 59.231 50.000 0.00 0.00 38.75 4.18
192 193 0.323629 TGGACCCCAATGAACGAGTC 59.676 55.000 0.00 0.00 0.00 3.36
193 194 0.323629 GGACCCCAATGAACGAGTCA 59.676 55.000 0.00 0.00 41.67 3.41
205 206 5.263968 TGAACGAGTCATTATTCTCCTCC 57.736 43.478 0.00 0.00 0.00 4.30
206 207 4.956700 TGAACGAGTCATTATTCTCCTCCT 59.043 41.667 0.00 0.00 0.00 3.69
207 208 5.067936 TGAACGAGTCATTATTCTCCTCCTC 59.932 44.000 0.00 0.00 0.00 3.71
208 209 4.798882 ACGAGTCATTATTCTCCTCCTCT 58.201 43.478 0.00 0.00 0.00 3.69
209 210 5.205056 ACGAGTCATTATTCTCCTCCTCTT 58.795 41.667 0.00 0.00 0.00 2.85
210 211 5.659079 ACGAGTCATTATTCTCCTCCTCTTT 59.341 40.000 0.00 0.00 0.00 2.52
211 212 6.834451 ACGAGTCATTATTCTCCTCCTCTTTA 59.166 38.462 0.00 0.00 0.00 1.85
212 213 7.342284 ACGAGTCATTATTCTCCTCCTCTTTAA 59.658 37.037 0.00 0.00 0.00 1.52
213 214 8.198109 CGAGTCATTATTCTCCTCCTCTTTAAA 58.802 37.037 0.00 0.00 0.00 1.52
223 224 9.548631 TTCTCCTCCTCTTTAAATAAGAGAAGA 57.451 33.333 14.41 9.23 44.96 2.87
224 225 9.722317 TCTCCTCCTCTTTAAATAAGAGAAGAT 57.278 33.333 14.41 0.00 44.96 2.40
265 266 9.917887 AATTTCTCTCTCATTCACCTTATCATT 57.082 29.630 0.00 0.00 0.00 2.57
266 267 9.917887 ATTTCTCTCTCATTCACCTTATCATTT 57.082 29.630 0.00 0.00 0.00 2.32
268 269 9.823647 TTCTCTCTCATTCACCTTATCATTTAC 57.176 33.333 0.00 0.00 0.00 2.01
269 270 9.206690 TCTCTCTCATTCACCTTATCATTTACT 57.793 33.333 0.00 0.00 0.00 2.24
270 271 9.474920 CTCTCTCATTCACCTTATCATTTACTC 57.525 37.037 0.00 0.00 0.00 2.59
271 272 8.424918 TCTCTCATTCACCTTATCATTTACTCC 58.575 37.037 0.00 0.00 0.00 3.85
272 273 7.509546 TCTCATTCACCTTATCATTTACTCCC 58.490 38.462 0.00 0.00 0.00 4.30
273 274 7.348274 TCTCATTCACCTTATCATTTACTCCCT 59.652 37.037 0.00 0.00 0.00 4.20
274 275 7.509546 TCATTCACCTTATCATTTACTCCCTC 58.490 38.462 0.00 0.00 0.00 4.30
275 276 5.888982 TCACCTTATCATTTACTCCCTCC 57.111 43.478 0.00 0.00 0.00 4.30
276 277 4.344102 TCACCTTATCATTTACTCCCTCCG 59.656 45.833 0.00 0.00 0.00 4.63
277 278 3.646637 ACCTTATCATTTACTCCCTCCGG 59.353 47.826 0.00 0.00 0.00 5.14
278 279 3.646637 CCTTATCATTTACTCCCTCCGGT 59.353 47.826 0.00 0.00 0.00 5.28
279 280 4.262506 CCTTATCATTTACTCCCTCCGGTC 60.263 50.000 0.00 0.00 0.00 4.79
280 281 1.492764 TCATTTACTCCCTCCGGTCC 58.507 55.000 0.00 0.00 0.00 4.46
281 282 1.007963 TCATTTACTCCCTCCGGTCCT 59.992 52.381 0.00 0.00 0.00 3.85
282 283 1.838077 CATTTACTCCCTCCGGTCCTT 59.162 52.381 0.00 0.00 0.00 3.36
283 284 2.034436 TTTACTCCCTCCGGTCCTTT 57.966 50.000 0.00 0.00 0.00 3.11
284 285 2.034436 TTACTCCCTCCGGTCCTTTT 57.966 50.000 0.00 0.00 0.00 2.27
285 286 2.034436 TACTCCCTCCGGTCCTTTTT 57.966 50.000 0.00 0.00 0.00 1.94
286 287 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
287 288 1.907255 ACTCCCTCCGGTCCTTTTTAG 59.093 52.381 0.00 0.00 0.00 1.85
288 289 1.907255 CTCCCTCCGGTCCTTTTTAGT 59.093 52.381 0.00 0.00 0.00 2.24
289 290 2.305052 CTCCCTCCGGTCCTTTTTAGTT 59.695 50.000 0.00 0.00 0.00 2.24
290 291 2.303890 TCCCTCCGGTCCTTTTTAGTTC 59.696 50.000 0.00 0.00 0.00 3.01
291 292 2.344025 CCTCCGGTCCTTTTTAGTTCG 58.656 52.381 0.00 0.00 0.00 3.95
292 293 1.730612 CTCCGGTCCTTTTTAGTTCGC 59.269 52.381 0.00 0.00 0.00 4.70
293 294 1.070445 TCCGGTCCTTTTTAGTTCGCA 59.930 47.619 0.00 0.00 0.00 5.10
294 295 2.081462 CCGGTCCTTTTTAGTTCGCAT 58.919 47.619 0.00 0.00 0.00 4.73
295 296 3.055963 TCCGGTCCTTTTTAGTTCGCATA 60.056 43.478 0.00 0.00 0.00 3.14
296 297 3.875134 CCGGTCCTTTTTAGTTCGCATAT 59.125 43.478 0.00 0.00 0.00 1.78
297 298 5.051816 CCGGTCCTTTTTAGTTCGCATATA 58.948 41.667 0.00 0.00 0.00 0.86
298 299 5.524646 CCGGTCCTTTTTAGTTCGCATATAA 59.475 40.000 0.00 0.00 0.00 0.98
299 300 6.292703 CCGGTCCTTTTTAGTTCGCATATAAG 60.293 42.308 0.00 0.00 0.00 1.73
300 301 6.477688 CGGTCCTTTTTAGTTCGCATATAAGA 59.522 38.462 0.00 0.00 0.00 2.10
301 302 7.170998 CGGTCCTTTTTAGTTCGCATATAAGAT 59.829 37.037 0.00 0.00 0.00 2.40
302 303 8.837389 GGTCCTTTTTAGTTCGCATATAAGATT 58.163 33.333 0.00 0.00 0.00 2.40
309 310 9.594478 TTTAGTTCGCATATAAGATTTGACTGA 57.406 29.630 0.00 0.00 0.00 3.41
310 311 9.594478 TTAGTTCGCATATAAGATTTGACTGAA 57.406 29.630 0.00 0.00 0.00 3.02
311 312 8.136057 AGTTCGCATATAAGATTTGACTGAAG 57.864 34.615 0.00 0.00 0.00 3.02
312 313 7.766278 AGTTCGCATATAAGATTTGACTGAAGT 59.234 33.333 0.00 0.00 0.00 3.01
313 314 7.700322 TCGCATATAAGATTTGACTGAAGTC 57.300 36.000 3.41 3.41 44.97 3.01
328 329 7.409465 GACTGAAGTCAATTCTCGTAAAGTT 57.591 36.000 5.58 0.00 44.18 2.66
329 330 7.787725 ACTGAAGTCAATTCTCGTAAAGTTT 57.212 32.000 0.00 0.00 38.83 2.66
330 331 7.630924 ACTGAAGTCAATTCTCGTAAAGTTTG 58.369 34.615 0.00 0.00 38.83 2.93
331 332 7.494625 ACTGAAGTCAATTCTCGTAAAGTTTGA 59.505 33.333 0.00 0.00 38.83 2.69
332 333 7.627340 TGAAGTCAATTCTCGTAAAGTTTGAC 58.373 34.615 0.00 5.67 42.73 3.18
333 334 6.541111 AGTCAATTCTCGTAAAGTTTGACC 57.459 37.500 9.31 0.00 43.04 4.02
334 335 6.053005 AGTCAATTCTCGTAAAGTTTGACCA 58.947 36.000 9.31 0.00 43.04 4.02
335 336 6.540914 AGTCAATTCTCGTAAAGTTTGACCAA 59.459 34.615 9.31 0.00 43.04 3.67
336 337 6.631636 GTCAATTCTCGTAAAGTTTGACCAAC 59.368 38.462 0.00 0.00 40.00 3.77
350 351 8.702163 AGTTTGACCAACTTTGTAGAAAAATG 57.298 30.769 0.00 0.00 43.89 2.32
351 352 8.311109 AGTTTGACCAACTTTGTAGAAAAATGT 58.689 29.630 0.00 0.00 43.89 2.71
352 353 8.379902 GTTTGACCAACTTTGTAGAAAAATGTG 58.620 33.333 0.00 0.00 31.92 3.21
353 354 6.039616 TGACCAACTTTGTAGAAAAATGTGC 58.960 36.000 0.00 0.00 0.00 4.57
354 355 5.356426 ACCAACTTTGTAGAAAAATGTGCC 58.644 37.500 0.00 0.00 0.00 5.01
355 356 5.105146 ACCAACTTTGTAGAAAAATGTGCCA 60.105 36.000 0.00 0.00 0.00 4.92
356 357 5.814705 CCAACTTTGTAGAAAAATGTGCCAA 59.185 36.000 0.00 0.00 0.00 4.52
357 358 6.238076 CCAACTTTGTAGAAAAATGTGCCAAC 60.238 38.462 0.00 0.00 0.00 3.77
358 359 5.971763 ACTTTGTAGAAAAATGTGCCAACA 58.028 33.333 0.00 0.00 41.58 3.33
369 370 3.646611 TGTGCCAACATTCACAATCTG 57.353 42.857 0.00 0.00 39.91 2.90
370 371 3.220940 TGTGCCAACATTCACAATCTGA 58.779 40.909 0.00 0.00 39.91 3.27
371 372 3.635836 TGTGCCAACATTCACAATCTGAA 59.364 39.130 0.00 0.00 43.28 3.02
372 373 4.099113 TGTGCCAACATTCACAATCTGAAA 59.901 37.500 0.00 0.00 42.37 2.69
373 374 5.221481 TGTGCCAACATTCACAATCTGAAAT 60.221 36.000 0.00 0.00 42.37 2.17
374 375 5.346822 GTGCCAACATTCACAATCTGAAATC 59.653 40.000 0.00 0.00 42.37 2.17
375 376 5.010820 TGCCAACATTCACAATCTGAAATCA 59.989 36.000 0.00 0.00 42.37 2.57
376 377 5.927689 GCCAACATTCACAATCTGAAATCAA 59.072 36.000 0.00 0.00 42.37 2.57
377 378 6.592607 GCCAACATTCACAATCTGAAATCAAT 59.407 34.615 0.00 0.00 42.37 2.57
378 379 7.760794 GCCAACATTCACAATCTGAAATCAATA 59.239 33.333 0.00 0.00 42.37 1.90
379 380 9.811995 CCAACATTCACAATCTGAAATCAATAT 57.188 29.630 0.00 0.00 42.37 1.28
392 393 9.755804 TCTGAAATCAATATCACTAGATGTGTC 57.244 33.333 0.00 0.00 46.27 3.67
393 394 9.538508 CTGAAATCAATATCACTAGATGTGTCA 57.461 33.333 0.00 0.00 46.27 3.58
397 398 9.486497 AATCAATATCACTAGATGTGTCATGAC 57.514 33.333 19.27 19.27 46.27 3.06
398 399 8.242729 TCAATATCACTAGATGTGTCATGACT 57.757 34.615 25.55 6.60 46.27 3.41
399 400 8.699130 TCAATATCACTAGATGTGTCATGACTT 58.301 33.333 25.55 11.29 46.27 3.01
400 401 9.971922 CAATATCACTAGATGTGTCATGACTTA 57.028 33.333 25.55 15.01 46.27 2.24
404 405 9.896645 ATCACTAGATGTGTCATGACTTAAATT 57.103 29.630 25.55 10.21 46.27 1.82
405 406 9.725019 TCACTAGATGTGTCATGACTTAAATTT 57.275 29.630 25.55 11.61 46.27 1.82
406 407 9.979270 CACTAGATGTGTCATGACTTAAATTTC 57.021 33.333 25.55 12.60 41.53 2.17
407 408 9.725019 ACTAGATGTGTCATGACTTAAATTTCA 57.275 29.630 25.55 11.92 0.00 2.69
435 436 7.880160 TTTATAACTTTAGCATGGCAGATGT 57.120 32.000 0.00 0.00 0.00 3.06
436 437 7.880160 TTATAACTTTAGCATGGCAGATGTT 57.120 32.000 0.00 0.00 0.00 2.71
437 438 4.445452 AACTTTAGCATGGCAGATGTTG 57.555 40.909 0.00 0.00 0.00 3.33
438 439 3.689347 ACTTTAGCATGGCAGATGTTGA 58.311 40.909 0.00 0.00 0.00 3.18
439 440 4.275810 ACTTTAGCATGGCAGATGTTGAT 58.724 39.130 0.00 0.00 0.00 2.57
440 441 5.439721 ACTTTAGCATGGCAGATGTTGATA 58.560 37.500 0.00 0.00 0.00 2.15
441 442 6.066690 ACTTTAGCATGGCAGATGTTGATAT 58.933 36.000 0.00 0.00 0.00 1.63
442 443 6.548622 ACTTTAGCATGGCAGATGTTGATATT 59.451 34.615 0.00 0.00 0.00 1.28
443 444 6.964807 TTAGCATGGCAGATGTTGATATTT 57.035 33.333 0.00 0.00 0.00 1.40
444 445 5.864418 AGCATGGCAGATGTTGATATTTT 57.136 34.783 0.00 0.00 0.00 1.82
445 446 6.229936 AGCATGGCAGATGTTGATATTTTT 57.770 33.333 0.00 0.00 0.00 1.94
503 504 9.671279 TGACTTCAAAGAATTCTAATATGCAGA 57.329 29.630 8.75 0.00 0.00 4.26
505 506 9.678260 ACTTCAAAGAATTCTAATATGCAGAGT 57.322 29.630 8.75 7.81 0.00 3.24
515 516 8.732746 TTCTAATATGCAGAGTAAAAAGGACC 57.267 34.615 0.00 0.00 0.00 4.46
516 517 6.984474 TCTAATATGCAGAGTAAAAAGGACCG 59.016 38.462 0.00 0.00 0.00 4.79
517 518 3.695830 ATGCAGAGTAAAAAGGACCGA 57.304 42.857 0.00 0.00 0.00 4.69
518 519 3.478857 TGCAGAGTAAAAAGGACCGAA 57.521 42.857 0.00 0.00 0.00 4.30
519 520 3.811083 TGCAGAGTAAAAAGGACCGAAA 58.189 40.909 0.00 0.00 0.00 3.46
520 521 4.200874 TGCAGAGTAAAAAGGACCGAAAA 58.799 39.130 0.00 0.00 0.00 2.29
521 522 4.641094 TGCAGAGTAAAAAGGACCGAAAAA 59.359 37.500 0.00 0.00 0.00 1.94
522 523 5.212934 GCAGAGTAAAAAGGACCGAAAAAG 58.787 41.667 0.00 0.00 0.00 2.27
523 524 5.220989 GCAGAGTAAAAAGGACCGAAAAAGT 60.221 40.000 0.00 0.00 0.00 2.66
524 525 6.017687 GCAGAGTAAAAAGGACCGAAAAAGTA 60.018 38.462 0.00 0.00 0.00 2.24
525 526 7.308408 GCAGAGTAAAAAGGACCGAAAAAGTAT 60.308 37.037 0.00 0.00 0.00 2.12
526 527 8.228464 CAGAGTAAAAAGGACCGAAAAAGTATC 58.772 37.037 0.00 0.00 0.00 2.24
527 528 7.935210 AGAGTAAAAAGGACCGAAAAAGTATCA 59.065 33.333 0.00 0.00 0.00 2.15
528 529 8.631480 AGTAAAAAGGACCGAAAAAGTATCAT 57.369 30.769 0.00 0.00 0.00 2.45
529 530 9.729281 AGTAAAAAGGACCGAAAAAGTATCATA 57.271 29.630 0.00 0.00 0.00 2.15
534 535 7.907214 AGGACCGAAAAAGTATCATATATGC 57.093 36.000 7.92 0.00 0.00 3.14
535 536 6.879458 AGGACCGAAAAAGTATCATATATGCC 59.121 38.462 7.92 0.00 0.00 4.40
536 537 6.653320 GGACCGAAAAAGTATCATATATGCCA 59.347 38.462 7.92 0.00 0.00 4.92
537 538 7.174253 GGACCGAAAAAGTATCATATATGCCAA 59.826 37.037 7.92 0.00 0.00 4.52
538 539 8.635765 ACCGAAAAAGTATCATATATGCCAAT 57.364 30.769 7.92 0.00 0.00 3.16
539 540 9.077885 ACCGAAAAAGTATCATATATGCCAATT 57.922 29.630 7.92 1.15 0.00 2.32
540 541 9.345517 CCGAAAAAGTATCATATATGCCAATTG 57.654 33.333 7.92 0.00 0.00 2.32
541 542 9.897744 CGAAAAAGTATCATATATGCCAATTGT 57.102 29.630 7.92 0.00 0.00 2.71
550 551 9.797642 ATCATATATGCCAATTGTAAGACAGAA 57.202 29.630 7.92 0.00 0.00 3.02
551 552 9.056005 TCATATATGCCAATTGTAAGACAGAAC 57.944 33.333 7.92 0.00 0.00 3.01
552 553 6.699575 ATATGCCAATTGTAAGACAGAACC 57.300 37.500 4.43 0.00 0.00 3.62
553 554 3.826524 TGCCAATTGTAAGACAGAACCA 58.173 40.909 4.43 0.00 0.00 3.67
554 555 4.406456 TGCCAATTGTAAGACAGAACCAT 58.594 39.130 4.43 0.00 0.00 3.55
555 556 4.832266 TGCCAATTGTAAGACAGAACCATT 59.168 37.500 4.43 0.00 0.00 3.16
556 557 5.163513 GCCAATTGTAAGACAGAACCATTG 58.836 41.667 4.43 0.00 31.76 2.82
557 558 5.278957 GCCAATTGTAAGACAGAACCATTGT 60.279 40.000 4.43 0.00 30.62 2.71
558 559 6.072175 GCCAATTGTAAGACAGAACCATTGTA 60.072 38.462 4.43 0.00 30.62 2.41
559 560 7.305474 CCAATTGTAAGACAGAACCATTGTAC 58.695 38.462 4.43 0.00 30.62 2.90
560 561 7.040755 CCAATTGTAAGACAGAACCATTGTACA 60.041 37.037 4.43 0.00 30.62 2.90
561 562 8.514594 CAATTGTAAGACAGAACCATTGTACAT 58.485 33.333 0.00 0.00 28.99 2.29
562 563 7.433708 TTGTAAGACAGAACCATTGTACATG 57.566 36.000 0.00 0.00 0.00 3.21
563 564 6.530120 TGTAAGACAGAACCATTGTACATGT 58.470 36.000 2.69 2.69 0.00 3.21
564 565 6.649141 TGTAAGACAGAACCATTGTACATGTC 59.351 38.462 13.24 13.24 34.23 3.06
565 566 4.245660 AGACAGAACCATTGTACATGTCG 58.754 43.478 0.00 0.00 36.86 4.35
587 588 3.636282 AACGGGTAGCAATTTCAACAC 57.364 42.857 0.00 0.00 0.00 3.32
645 646 1.144565 CTGATTCTCACGCAGCCTCG 61.145 60.000 0.00 0.00 0.00 4.63
734 735 0.848735 CCACCACCATCCAGATCCAT 59.151 55.000 0.00 0.00 0.00 3.41
744 745 1.206878 CCAGATCCATGGACCTCACA 58.793 55.000 18.99 0.00 43.57 3.58
765 773 1.081242 CCAGCATCACCAACAACGC 60.081 57.895 0.00 0.00 0.00 4.84
834 842 3.404438 CGGTTCCCCATCCCCGAA 61.404 66.667 0.00 0.00 43.01 4.30
860 868 2.380081 GCTATAAAGCCGTGCGTGT 58.620 52.632 0.00 0.00 43.40 4.49
916 924 1.559368 CCATCCATCCACAGCCAAAA 58.441 50.000 0.00 0.00 0.00 2.44
922 930 3.321682 TCCATCCACAGCCAAAAGAAAAG 59.678 43.478 0.00 0.00 0.00 2.27
972 982 2.482333 CGGTCCTCCTCTCGCGAAT 61.482 63.158 11.33 0.00 0.00 3.34
1055 1065 0.833949 GACCTGGAGTTGGGGATCTC 59.166 60.000 0.00 0.00 0.00 2.75
1308 1342 3.471244 CTCCGACACGATCCCGCTC 62.471 68.421 0.00 0.00 39.95 5.03
1338 1378 1.810412 GCCGCCTCCGTGAATAAGAAT 60.810 52.381 0.00 0.00 0.00 2.40
1442 1500 5.129815 AGAGAGTAGAGGTACACAGGTAGAG 59.870 48.000 0.00 0.00 0.00 2.43
1446 1504 2.920941 AGAGGTACACAGGTAGAGGACT 59.079 50.000 0.00 0.00 0.00 3.85
1462 1520 5.725362 AGAGGACTGCTCTTGTGTAATTAC 58.275 41.667 8.75 8.75 0.00 1.89
1463 1521 4.833390 AGGACTGCTCTTGTGTAATTACC 58.167 43.478 13.01 5.32 0.00 2.85
1464 1522 3.617263 GGACTGCTCTTGTGTAATTACCG 59.383 47.826 13.01 0.00 0.00 4.02
1465 1523 3.000727 ACTGCTCTTGTGTAATTACCGC 58.999 45.455 13.01 6.72 0.00 5.68
1466 1524 1.996898 TGCTCTTGTGTAATTACCGCG 59.003 47.619 13.01 0.00 0.00 6.46
1467 1525 1.997606 GCTCTTGTGTAATTACCGCGT 59.002 47.619 13.01 0.00 0.00 6.01
1468 1526 2.414138 GCTCTTGTGTAATTACCGCGTT 59.586 45.455 13.01 0.00 0.00 4.84
1469 1527 3.723835 GCTCTTGTGTAATTACCGCGTTG 60.724 47.826 13.01 0.00 0.00 4.10
1470 1528 3.391965 TCTTGTGTAATTACCGCGTTGT 58.608 40.909 13.01 0.00 0.00 3.32
1471 1529 3.808726 TCTTGTGTAATTACCGCGTTGTT 59.191 39.130 13.01 0.00 0.00 2.83
1472 1530 4.272991 TCTTGTGTAATTACCGCGTTGTTT 59.727 37.500 13.01 0.00 0.00 2.83
1473 1531 4.131202 TGTGTAATTACCGCGTTGTTTC 57.869 40.909 13.01 0.00 0.00 2.78
1474 1532 3.059051 TGTGTAATTACCGCGTTGTTTCC 60.059 43.478 13.01 0.00 0.00 3.13
1475 1533 2.483491 TGTAATTACCGCGTTGTTTCCC 59.517 45.455 13.01 0.00 0.00 3.97
1476 1534 0.883153 AATTACCGCGTTGTTTCCCC 59.117 50.000 4.92 0.00 0.00 4.81
1477 1535 0.961857 ATTACCGCGTTGTTTCCCCC 60.962 55.000 4.92 0.00 0.00 5.40
1478 1536 2.054473 TTACCGCGTTGTTTCCCCCT 62.054 55.000 4.92 0.00 0.00 4.79
1479 1537 1.190833 TACCGCGTTGTTTCCCCCTA 61.191 55.000 4.92 0.00 0.00 3.53
1480 1538 1.078001 CCGCGTTGTTTCCCCCTAT 60.078 57.895 4.92 0.00 0.00 2.57
1481 1539 1.093496 CCGCGTTGTTTCCCCCTATC 61.093 60.000 4.92 0.00 0.00 2.08
1482 1540 0.107848 CGCGTTGTTTCCCCCTATCT 60.108 55.000 0.00 0.00 0.00 1.98
1527 1586 4.867608 ACGGGAAAAGACAAAATTGTGTTG 59.132 37.500 1.98 0.00 42.90 3.33
1651 1711 1.854227 GCATGTAGCGTTACCTCCTC 58.146 55.000 6.98 0.00 0.00 3.71
1680 1740 7.784633 ATTCGAATTTGAATCTTCTCTCTCC 57.215 36.000 14.21 0.00 33.34 3.71
1681 1741 6.286240 TCGAATTTGAATCTTCTCTCTCCA 57.714 37.500 0.00 0.00 0.00 3.86
1682 1742 6.882656 TCGAATTTGAATCTTCTCTCTCCAT 58.117 36.000 0.00 0.00 0.00 3.41
1683 1743 8.011844 TCGAATTTGAATCTTCTCTCTCCATA 57.988 34.615 0.00 0.00 0.00 2.74
1684 1744 8.646004 TCGAATTTGAATCTTCTCTCTCCATAT 58.354 33.333 0.00 0.00 0.00 1.78
1685 1745 9.920133 CGAATTTGAATCTTCTCTCTCCATATA 57.080 33.333 0.00 0.00 0.00 0.86
1695 1755 9.567776 TCTTCTCTCTCCATATAACTAGACAAG 57.432 37.037 0.00 0.00 0.00 3.16
1696 1756 9.567776 CTTCTCTCTCCATATAACTAGACAAGA 57.432 37.037 0.00 0.00 0.00 3.02
1698 1758 9.733556 TCTCTCTCCATATAACTAGACAAGATC 57.266 37.037 0.00 0.00 0.00 2.75
1699 1759 8.554835 TCTCTCCATATAACTAGACAAGATCG 57.445 38.462 0.00 0.00 0.00 3.69
1700 1760 8.376270 TCTCTCCATATAACTAGACAAGATCGA 58.624 37.037 0.00 0.00 0.00 3.59
1701 1761 8.919777 TCTCCATATAACTAGACAAGATCGAA 57.080 34.615 0.00 0.00 0.00 3.71
1702 1762 9.004717 TCTCCATATAACTAGACAAGATCGAAG 57.995 37.037 0.00 0.00 0.00 3.79
1703 1763 8.919777 TCCATATAACTAGACAAGATCGAAGA 57.080 34.615 0.00 0.00 45.75 2.87
1704 1764 9.350951 TCCATATAACTAGACAAGATCGAAGAA 57.649 33.333 0.00 0.00 43.58 2.52
1710 1770 8.641499 AACTAGACAAGATCGAAGAATTGATC 57.359 34.615 0.00 0.00 43.58 2.92
1711 1771 7.206687 ACTAGACAAGATCGAAGAATTGATCC 58.793 38.462 0.00 0.55 43.58 3.36
1712 1772 5.982356 AGACAAGATCGAAGAATTGATCCA 58.018 37.500 8.63 0.00 43.58 3.41
1713 1773 6.590068 AGACAAGATCGAAGAATTGATCCAT 58.410 36.000 8.63 0.00 43.58 3.41
1714 1774 6.705381 AGACAAGATCGAAGAATTGATCCATC 59.295 38.462 8.63 0.26 43.58 3.51
1715 1775 5.762218 ACAAGATCGAAGAATTGATCCATCC 59.238 40.000 8.63 0.00 43.58 3.51
1716 1776 5.822132 AGATCGAAGAATTGATCCATCCT 57.178 39.130 0.00 0.00 43.58 3.24
1717 1777 5.549347 AGATCGAAGAATTGATCCATCCTG 58.451 41.667 0.00 0.00 43.58 3.86
1718 1778 5.306419 AGATCGAAGAATTGATCCATCCTGA 59.694 40.000 0.00 0.00 43.58 3.86
1719 1779 4.697514 TCGAAGAATTGATCCATCCTGAC 58.302 43.478 0.00 0.00 0.00 3.51
1720 1780 3.492383 CGAAGAATTGATCCATCCTGACG 59.508 47.826 0.00 0.00 0.00 4.35
1721 1781 4.446371 GAAGAATTGATCCATCCTGACGT 58.554 43.478 0.00 0.00 0.00 4.34
1722 1782 5.601662 GAAGAATTGATCCATCCTGACGTA 58.398 41.667 0.00 0.00 0.00 3.57
1723 1783 4.950050 AGAATTGATCCATCCTGACGTAC 58.050 43.478 0.00 0.00 0.00 3.67
1724 1784 2.863401 TTGATCCATCCTGACGTACG 57.137 50.000 15.01 15.01 0.00 3.67
1725 1785 0.384309 TGATCCATCCTGACGTACGC 59.616 55.000 16.72 8.98 0.00 4.42
1726 1786 0.318784 GATCCATCCTGACGTACGCC 60.319 60.000 16.72 4.46 0.00 5.68
1727 1787 2.071844 ATCCATCCTGACGTACGCCG 62.072 60.000 16.72 3.51 44.03 6.46
1728 1788 2.278596 CATCCTGACGTACGCCGG 60.279 66.667 16.72 9.69 42.24 6.13
1729 1789 2.438975 ATCCTGACGTACGCCGGA 60.439 61.111 16.72 18.08 42.24 5.14
1730 1790 1.826921 ATCCTGACGTACGCCGGAT 60.827 57.895 21.06 21.06 42.24 4.18
1731 1791 1.389609 ATCCTGACGTACGCCGGATT 61.390 55.000 21.06 10.47 42.24 3.01
1732 1792 1.588139 CCTGACGTACGCCGGATTC 60.588 63.158 16.72 4.68 42.24 2.52
1733 1793 1.937846 CTGACGTACGCCGGATTCG 60.938 63.158 16.72 4.40 42.24 3.34
1743 1803 2.749839 CGGATTCGGCAGCCCAAA 60.750 61.111 5.63 0.40 0.00 3.28
1744 1804 2.339556 CGGATTCGGCAGCCCAAAA 61.340 57.895 5.63 0.00 0.00 2.44
1745 1805 1.512694 GGATTCGGCAGCCCAAAAG 59.487 57.895 5.63 0.00 0.00 2.27
1746 1806 1.512694 GATTCGGCAGCCCAAAAGG 59.487 57.895 5.63 0.00 39.47 3.11
1765 1825 4.023726 AGGCTAGGAGATTAGGAGTACG 57.976 50.000 0.00 0.00 0.00 3.67
1767 1827 4.141205 AGGCTAGGAGATTAGGAGTACGTT 60.141 45.833 0.00 0.00 0.00 3.99
1798 1858 2.412525 CTTGCAAGCACACGCCAA 59.587 55.556 14.65 0.00 39.83 4.52
1799 1859 1.659335 CTTGCAAGCACACGCCAAG 60.659 57.895 14.65 0.00 39.83 3.61
1801 1861 3.595758 GCAAGCACACGCCAAGGT 61.596 61.111 0.00 0.00 39.83 3.50
1828 1888 4.766373 TGGCATGCTCTGAATTTTCTTACA 59.234 37.500 18.92 0.00 0.00 2.41
1835 1895 6.260050 TGCTCTGAATTTTCTTACAAAGTCGT 59.740 34.615 0.00 0.00 34.22 4.34
1882 1943 6.001449 AGCCTTTTAATCCAGCTATGTACA 57.999 37.500 0.00 0.00 30.46 2.90
2089 2493 4.217118 CCATGATCACTAGCAATTAAGGCC 59.783 45.833 0.00 0.00 0.00 5.19
2099 2503 2.229302 GCAATTAAGGCCACCGTTGTAA 59.771 45.455 5.01 0.00 0.00 2.41
2149 2553 9.152327 TGGACATTGATAGTTCATAGAGAGAAT 57.848 33.333 0.00 0.00 0.00 2.40
2160 2564 2.295253 AGAGAGAATGGTTAACGCGG 57.705 50.000 12.47 0.00 0.00 6.46
2169 2573 1.001068 TGGTTAACGCGGAGATGACAA 59.999 47.619 12.47 0.00 0.00 3.18
2187 2591 1.846439 CAACCTGATATGGGTGGGACT 59.154 52.381 0.00 0.00 40.95 3.85
2242 2647 4.633565 GCTGATTCTGTCTAAGTGGAAAGG 59.366 45.833 0.00 0.00 0.00 3.11
2251 2656 5.826208 TGTCTAAGTGGAAAGGTTTTCTTCC 59.174 40.000 2.03 0.00 33.94 3.46
2351 2756 1.746615 CATGCAGGAACTCCACCCG 60.747 63.158 0.00 0.00 34.60 5.28
2360 2765 1.760613 GAACTCCACCCGACCATGATA 59.239 52.381 0.00 0.00 0.00 2.15
2386 2791 0.676782 ACCCAAAGCGTCCACTATGC 60.677 55.000 0.00 0.00 40.71 3.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.065914 AGTCTAGCATTTTCTTCAGTGCAA 58.934 37.500 0.00 0.00 39.94 4.08
1 2 4.645535 AGTCTAGCATTTTCTTCAGTGCA 58.354 39.130 0.00 0.00 39.94 4.57
2 3 5.619625 AAGTCTAGCATTTTCTTCAGTGC 57.380 39.130 0.00 0.00 37.84 4.40
3 4 5.855395 GCAAAGTCTAGCATTTTCTTCAGTG 59.145 40.000 0.00 0.00 0.00 3.66
4 5 5.532406 TGCAAAGTCTAGCATTTTCTTCAGT 59.468 36.000 0.00 0.00 35.51 3.41
5 6 6.005583 TGCAAAGTCTAGCATTTTCTTCAG 57.994 37.500 0.00 0.00 35.51 3.02
15 16 4.253685 GGTTAGTGATGCAAAGTCTAGCA 58.746 43.478 0.00 2.73 45.92 3.49
16 17 4.253685 TGGTTAGTGATGCAAAGTCTAGC 58.746 43.478 0.00 0.00 0.00 3.42
17 18 6.992063 ATTGGTTAGTGATGCAAAGTCTAG 57.008 37.500 0.00 0.00 0.00 2.43
18 19 6.939730 TCAATTGGTTAGTGATGCAAAGTCTA 59.060 34.615 5.42 0.00 0.00 2.59
19 20 5.769662 TCAATTGGTTAGTGATGCAAAGTCT 59.230 36.000 5.42 0.00 0.00 3.24
20 21 5.858581 GTCAATTGGTTAGTGATGCAAAGTC 59.141 40.000 5.42 0.00 0.00 3.01
21 22 5.278957 GGTCAATTGGTTAGTGATGCAAAGT 60.279 40.000 5.42 0.00 0.00 2.66
22 23 5.047802 AGGTCAATTGGTTAGTGATGCAAAG 60.048 40.000 5.42 0.00 0.00 2.77
23 24 4.832266 AGGTCAATTGGTTAGTGATGCAAA 59.168 37.500 5.42 0.00 0.00 3.68
24 25 4.218200 CAGGTCAATTGGTTAGTGATGCAA 59.782 41.667 5.42 0.00 0.00 4.08
25 26 3.758023 CAGGTCAATTGGTTAGTGATGCA 59.242 43.478 5.42 0.00 0.00 3.96
26 27 4.009675 TCAGGTCAATTGGTTAGTGATGC 58.990 43.478 5.42 0.00 0.00 3.91
27 28 5.707298 AGTTCAGGTCAATTGGTTAGTGATG 59.293 40.000 5.42 0.00 0.00 3.07
28 29 5.880901 AGTTCAGGTCAATTGGTTAGTGAT 58.119 37.500 5.42 0.00 0.00 3.06
29 30 5.304686 AGTTCAGGTCAATTGGTTAGTGA 57.695 39.130 5.42 0.00 0.00 3.41
30 31 5.762045 CAAGTTCAGGTCAATTGGTTAGTG 58.238 41.667 5.42 0.00 0.00 2.74
31 32 4.278419 GCAAGTTCAGGTCAATTGGTTAGT 59.722 41.667 5.42 0.00 0.00 2.24
32 33 4.278170 TGCAAGTTCAGGTCAATTGGTTAG 59.722 41.667 5.42 0.00 0.00 2.34
33 34 4.037446 GTGCAAGTTCAGGTCAATTGGTTA 59.963 41.667 5.42 0.00 0.00 2.85
34 35 3.030291 TGCAAGTTCAGGTCAATTGGTT 58.970 40.909 5.42 0.00 0.00 3.67
35 36 2.362077 GTGCAAGTTCAGGTCAATTGGT 59.638 45.455 5.42 0.00 0.00 3.67
36 37 2.361757 TGTGCAAGTTCAGGTCAATTGG 59.638 45.455 5.42 0.00 0.00 3.16
37 38 3.713858 TGTGCAAGTTCAGGTCAATTG 57.286 42.857 0.00 0.00 0.00 2.32
38 39 4.942761 ATTGTGCAAGTTCAGGTCAATT 57.057 36.364 0.00 0.00 0.00 2.32
39 40 5.072741 ACTATTGTGCAAGTTCAGGTCAAT 58.927 37.500 0.00 0.00 0.00 2.57
40 41 4.460263 ACTATTGTGCAAGTTCAGGTCAA 58.540 39.130 0.00 0.00 0.00 3.18
41 42 4.065088 GACTATTGTGCAAGTTCAGGTCA 58.935 43.478 0.00 0.00 0.00 4.02
42 43 4.065088 TGACTATTGTGCAAGTTCAGGTC 58.935 43.478 0.00 0.00 0.00 3.85
43 44 4.085357 TGACTATTGTGCAAGTTCAGGT 57.915 40.909 0.00 0.00 0.00 4.00
44 45 4.201753 CGATGACTATTGTGCAAGTTCAGG 60.202 45.833 0.00 0.00 0.00 3.86
45 46 4.627035 TCGATGACTATTGTGCAAGTTCAG 59.373 41.667 0.00 0.00 0.00 3.02
46 47 4.565022 TCGATGACTATTGTGCAAGTTCA 58.435 39.130 0.00 0.00 0.00 3.18
47 48 4.493220 GCTCGATGACTATTGTGCAAGTTC 60.493 45.833 0.00 0.00 37.23 3.01
48 49 3.372206 GCTCGATGACTATTGTGCAAGTT 59.628 43.478 0.00 0.00 37.23 2.66
49 50 2.932614 GCTCGATGACTATTGTGCAAGT 59.067 45.455 0.00 0.00 37.23 3.16
50 51 2.931969 TGCTCGATGACTATTGTGCAAG 59.068 45.455 0.00 0.00 41.67 4.01
51 52 2.672874 GTGCTCGATGACTATTGTGCAA 59.327 45.455 5.99 0.00 44.42 4.08
52 53 2.270923 GTGCTCGATGACTATTGTGCA 58.729 47.619 0.00 0.00 42.12 4.57
53 54 1.594862 GGTGCTCGATGACTATTGTGC 59.405 52.381 0.00 0.00 37.59 4.57
54 55 2.159043 AGGGTGCTCGATGACTATTGTG 60.159 50.000 0.00 0.00 0.00 3.33
55 56 2.111384 AGGGTGCTCGATGACTATTGT 58.889 47.619 0.00 0.00 0.00 2.71
56 57 2.898729 AGGGTGCTCGATGACTATTG 57.101 50.000 0.00 0.00 0.00 1.90
57 58 2.223829 CGAAGGGTGCTCGATGACTATT 60.224 50.000 0.00 0.00 38.61 1.73
58 59 1.338337 CGAAGGGTGCTCGATGACTAT 59.662 52.381 0.00 0.00 38.61 2.12
59 60 0.738975 CGAAGGGTGCTCGATGACTA 59.261 55.000 0.00 0.00 38.61 2.59
60 61 0.965866 TCGAAGGGTGCTCGATGACT 60.966 55.000 0.00 0.00 40.25 3.41
61 62 0.108804 TTCGAAGGGTGCTCGATGAC 60.109 55.000 0.00 0.00 44.25 3.06
62 63 0.173481 CTTCGAAGGGTGCTCGATGA 59.827 55.000 17.70 0.00 44.25 2.92
63 64 0.173481 TCTTCGAAGGGTGCTCGATG 59.827 55.000 24.37 0.00 44.25 3.84
64 65 0.173708 GTCTTCGAAGGGTGCTCGAT 59.826 55.000 24.37 0.00 44.25 3.59
65 66 1.176619 TGTCTTCGAAGGGTGCTCGA 61.177 55.000 24.37 0.11 43.25 4.04
66 67 1.009389 GTGTCTTCGAAGGGTGCTCG 61.009 60.000 24.37 0.00 37.66 5.03
67 68 1.009389 CGTGTCTTCGAAGGGTGCTC 61.009 60.000 24.37 11.93 0.00 4.26
68 69 1.006102 CGTGTCTTCGAAGGGTGCT 60.006 57.895 24.37 0.00 0.00 4.40
69 70 2.668280 GCGTGTCTTCGAAGGGTGC 61.668 63.158 24.37 18.27 0.00 5.01
70 71 2.027625 GGCGTGTCTTCGAAGGGTG 61.028 63.158 24.37 13.04 0.00 4.61
71 72 2.342648 GGCGTGTCTTCGAAGGGT 59.657 61.111 24.37 0.00 0.00 4.34
72 73 2.809601 CGGCGTGTCTTCGAAGGG 60.810 66.667 24.37 12.53 0.00 3.95
73 74 3.479269 GCGGCGTGTCTTCGAAGG 61.479 66.667 24.37 9.84 0.00 3.46
74 75 3.827784 CGCGGCGTGTCTTCGAAG 61.828 66.667 19.35 19.35 0.00 3.79
75 76 4.634133 ACGCGGCGTGTCTTCGAA 62.634 61.111 28.88 0.00 39.18 3.71
76 77 4.634133 AACGCGGCGTGTCTTCGA 62.634 61.111 30.10 0.00 39.99 3.71
77 78 4.409588 CAACGCGGCGTGTCTTCG 62.410 66.667 30.10 13.72 39.99 3.79
78 79 4.072088 CCAACGCGGCGTGTCTTC 62.072 66.667 30.10 0.00 39.99 2.87
91 92 2.679996 AAAGCGGATGGCCCCAAC 60.680 61.111 0.00 0.00 45.17 3.77
92 93 2.362375 GAAAGCGGATGGCCCCAA 60.362 61.111 0.00 0.00 45.17 4.12
93 94 2.512986 AATGAAAGCGGATGGCCCCA 62.513 55.000 0.00 0.00 45.17 4.96
94 95 0.467290 TAATGAAAGCGGATGGCCCC 60.467 55.000 0.00 0.00 45.17 5.80
95 96 1.338020 CTTAATGAAAGCGGATGGCCC 59.662 52.381 0.00 0.00 45.17 5.80
96 97 2.297701 TCTTAATGAAAGCGGATGGCC 58.702 47.619 0.00 0.00 45.17 5.36
97 98 3.565482 TGATCTTAATGAAAGCGGATGGC 59.435 43.478 0.00 0.00 44.05 4.40
98 99 5.756195 TTGATCTTAATGAAAGCGGATGG 57.244 39.130 0.00 0.00 34.97 3.51
99 100 7.019774 TCTTTGATCTTAATGAAAGCGGATG 57.980 36.000 0.00 0.00 36.41 3.51
100 101 7.630242 TTCTTTGATCTTAATGAAAGCGGAT 57.370 32.000 0.00 0.00 36.41 4.18
101 102 7.336679 TGATTCTTTGATCTTAATGAAAGCGGA 59.663 33.333 0.00 0.00 36.41 5.54
102 103 7.475015 TGATTCTTTGATCTTAATGAAAGCGG 58.525 34.615 0.00 0.00 36.41 5.52
103 104 9.167239 GATGATTCTTTGATCTTAATGAAAGCG 57.833 33.333 0.00 0.00 36.41 4.68
104 105 9.167239 CGATGATTCTTTGATCTTAATGAAAGC 57.833 33.333 0.00 0.00 36.41 3.51
105 106 9.661187 CCGATGATTCTTTGATCTTAATGAAAG 57.339 33.333 0.00 0.00 37.42 2.62
106 107 8.131100 GCCGATGATTCTTTGATCTTAATGAAA 58.869 33.333 0.00 0.00 30.63 2.69
107 108 7.518848 CGCCGATGATTCTTTGATCTTAATGAA 60.519 37.037 0.00 0.00 0.00 2.57
108 109 6.073602 CGCCGATGATTCTTTGATCTTAATGA 60.074 38.462 0.00 0.00 0.00 2.57
109 110 6.073602 TCGCCGATGATTCTTTGATCTTAATG 60.074 38.462 0.00 0.00 0.00 1.90
110 111 5.991606 TCGCCGATGATTCTTTGATCTTAAT 59.008 36.000 0.00 0.00 0.00 1.40
111 112 5.356426 TCGCCGATGATTCTTTGATCTTAA 58.644 37.500 0.00 0.00 0.00 1.85
112 113 4.944048 TCGCCGATGATTCTTTGATCTTA 58.056 39.130 0.00 0.00 0.00 2.10
113 114 3.797039 TCGCCGATGATTCTTTGATCTT 58.203 40.909 0.00 0.00 0.00 2.40
114 115 3.459232 TCGCCGATGATTCTTTGATCT 57.541 42.857 0.00 0.00 0.00 2.75
115 116 4.536364 TTTCGCCGATGATTCTTTGATC 57.464 40.909 0.00 0.00 0.00 2.92
116 117 4.731773 GCTTTTCGCCGATGATTCTTTGAT 60.732 41.667 0.00 0.00 0.00 2.57
117 118 3.426159 GCTTTTCGCCGATGATTCTTTGA 60.426 43.478 0.00 0.00 0.00 2.69
118 119 2.848302 GCTTTTCGCCGATGATTCTTTG 59.152 45.455 0.00 0.00 0.00 2.77
119 120 2.487762 TGCTTTTCGCCGATGATTCTTT 59.512 40.909 0.00 0.00 38.05 2.52
120 121 2.083774 TGCTTTTCGCCGATGATTCTT 58.916 42.857 0.00 0.00 38.05 2.52
121 122 1.737838 TGCTTTTCGCCGATGATTCT 58.262 45.000 0.00 0.00 38.05 2.40
122 123 2.542766 TTGCTTTTCGCCGATGATTC 57.457 45.000 0.00 0.00 38.05 2.52
123 124 3.119531 TCATTTGCTTTTCGCCGATGATT 60.120 39.130 0.00 0.00 35.40 2.57
124 125 2.423185 TCATTTGCTTTTCGCCGATGAT 59.577 40.909 0.00 0.00 35.40 2.45
125 126 1.809547 TCATTTGCTTTTCGCCGATGA 59.190 42.857 0.00 0.00 36.91 2.92
126 127 2.261037 TCATTTGCTTTTCGCCGATG 57.739 45.000 0.00 0.00 38.05 3.84
127 128 3.296322 TTTCATTTGCTTTTCGCCGAT 57.704 38.095 0.00 0.00 38.05 4.18
128 129 2.783828 TTTCATTTGCTTTTCGCCGA 57.216 40.000 0.00 0.00 38.05 5.54
129 130 3.850657 TTTTTCATTTGCTTTTCGCCG 57.149 38.095 0.00 0.00 38.05 6.46
130 131 6.423188 CAAATTTTTCATTTGCTTTTCGCC 57.577 33.333 0.00 0.00 38.05 5.54
139 140 3.250521 AGGCACCGCAAATTTTTCATTTG 59.749 39.130 3.39 3.39 40.80 2.32
140 141 3.475575 AGGCACCGCAAATTTTTCATTT 58.524 36.364 0.00 0.00 0.00 2.32
141 142 3.066380 GAGGCACCGCAAATTTTTCATT 58.934 40.909 0.00 0.00 0.00 2.57
142 143 2.612721 GGAGGCACCGCAAATTTTTCAT 60.613 45.455 0.00 0.00 0.00 2.57
143 144 1.270041 GGAGGCACCGCAAATTTTTCA 60.270 47.619 0.00 0.00 0.00 2.69
144 145 1.428448 GGAGGCACCGCAAATTTTTC 58.572 50.000 0.00 0.00 0.00 2.29
145 146 0.034756 GGGAGGCACCGCAAATTTTT 59.965 50.000 0.00 0.00 40.11 1.94
146 147 0.831711 AGGGAGGCACCGCAAATTTT 60.832 50.000 0.00 0.00 40.11 1.82
147 148 0.039035 TAGGGAGGCACCGCAAATTT 59.961 50.000 0.00 0.00 40.11 1.82
148 149 0.679960 GTAGGGAGGCACCGCAAATT 60.680 55.000 0.00 0.00 40.11 1.82
149 150 1.077716 GTAGGGAGGCACCGCAAAT 60.078 57.895 0.00 0.00 40.11 2.32
150 151 1.847798 ATGTAGGGAGGCACCGCAAA 61.848 55.000 0.00 0.00 40.11 3.68
151 152 0.978667 TATGTAGGGAGGCACCGCAA 60.979 55.000 0.00 0.00 40.11 4.85
152 153 1.382009 TATGTAGGGAGGCACCGCA 60.382 57.895 0.00 0.00 40.11 5.69
153 154 1.069258 GTATGTAGGGAGGCACCGC 59.931 63.158 0.00 0.00 40.11 5.68
154 155 1.120530 AAGTATGTAGGGAGGCACCG 58.879 55.000 0.00 0.00 40.11 4.94
155 156 1.141053 CCAAGTATGTAGGGAGGCACC 59.859 57.143 0.00 0.00 38.08 5.01
156 157 2.116238 TCCAAGTATGTAGGGAGGCAC 58.884 52.381 0.00 0.00 0.00 5.01
157 158 2.116238 GTCCAAGTATGTAGGGAGGCA 58.884 52.381 0.00 0.00 0.00 4.75
158 159 1.416772 GGTCCAAGTATGTAGGGAGGC 59.583 57.143 0.00 0.00 0.00 4.70
159 160 2.047830 GGGTCCAAGTATGTAGGGAGG 58.952 57.143 0.00 0.00 0.00 4.30
160 161 2.047830 GGGGTCCAAGTATGTAGGGAG 58.952 57.143 0.00 0.00 0.00 4.30
161 162 1.366787 TGGGGTCCAAGTATGTAGGGA 59.633 52.381 0.00 0.00 0.00 4.20
162 163 1.887797 TGGGGTCCAAGTATGTAGGG 58.112 55.000 0.00 0.00 0.00 3.53
173 174 0.323629 GACTCGTTCATTGGGGTCCA 59.676 55.000 0.00 0.00 0.00 4.02
174 175 0.323629 TGACTCGTTCATTGGGGTCC 59.676 55.000 0.00 0.00 0.00 4.46
175 176 2.403252 ATGACTCGTTCATTGGGGTC 57.597 50.000 0.00 0.00 42.87 4.46
183 184 4.956700 AGGAGGAGAATAATGACTCGTTCA 59.043 41.667 0.00 0.00 39.11 3.18
184 185 5.300792 AGAGGAGGAGAATAATGACTCGTTC 59.699 44.000 0.00 0.00 34.40 3.95
185 186 5.205056 AGAGGAGGAGAATAATGACTCGTT 58.795 41.667 0.00 0.00 34.40 3.85
186 187 4.798882 AGAGGAGGAGAATAATGACTCGT 58.201 43.478 0.00 0.00 34.40 4.18
187 188 5.782893 AAGAGGAGGAGAATAATGACTCG 57.217 43.478 0.00 0.00 34.40 4.18
197 198 9.548631 TCTTCTCTTATTTAAAGAGGAGGAGAA 57.451 33.333 23.54 17.26 45.76 2.87
198 199 9.722317 ATCTTCTCTTATTTAAAGAGGAGGAGA 57.278 33.333 26.26 26.26 45.76 3.71
239 240 9.917887 AATGATAAGGTGAATGAGAGAGAAATT 57.082 29.630 0.00 0.00 0.00 1.82
240 241 9.917887 AAATGATAAGGTGAATGAGAGAGAAAT 57.082 29.630 0.00 0.00 0.00 2.17
242 243 9.823647 GTAAATGATAAGGTGAATGAGAGAGAA 57.176 33.333 0.00 0.00 0.00 2.87
243 244 9.206690 AGTAAATGATAAGGTGAATGAGAGAGA 57.793 33.333 0.00 0.00 0.00 3.10
244 245 9.474920 GAGTAAATGATAAGGTGAATGAGAGAG 57.525 37.037 0.00 0.00 0.00 3.20
245 246 8.424918 GGAGTAAATGATAAGGTGAATGAGAGA 58.575 37.037 0.00 0.00 0.00 3.10
246 247 7.659390 GGGAGTAAATGATAAGGTGAATGAGAG 59.341 40.741 0.00 0.00 0.00 3.20
247 248 7.348274 AGGGAGTAAATGATAAGGTGAATGAGA 59.652 37.037 0.00 0.00 0.00 3.27
248 249 7.512992 AGGGAGTAAATGATAAGGTGAATGAG 58.487 38.462 0.00 0.00 0.00 2.90
249 250 7.420214 GGAGGGAGTAAATGATAAGGTGAATGA 60.420 40.741 0.00 0.00 0.00 2.57
250 251 6.712547 GGAGGGAGTAAATGATAAGGTGAATG 59.287 42.308 0.00 0.00 0.00 2.67
251 252 6.464465 CGGAGGGAGTAAATGATAAGGTGAAT 60.464 42.308 0.00 0.00 0.00 2.57
252 253 5.163343 CGGAGGGAGTAAATGATAAGGTGAA 60.163 44.000 0.00 0.00 0.00 3.18
253 254 4.344102 CGGAGGGAGTAAATGATAAGGTGA 59.656 45.833 0.00 0.00 0.00 4.02
254 255 4.632153 CGGAGGGAGTAAATGATAAGGTG 58.368 47.826 0.00 0.00 0.00 4.00
255 256 4.957684 CGGAGGGAGTAAATGATAAGGT 57.042 45.455 0.00 0.00 0.00 3.50
272 273 1.730612 GCGAACTAAAAAGGACCGGAG 59.269 52.381 9.46 0.00 0.00 4.63
273 274 1.070445 TGCGAACTAAAAAGGACCGGA 59.930 47.619 9.46 0.00 0.00 5.14
274 275 1.515081 TGCGAACTAAAAAGGACCGG 58.485 50.000 0.00 0.00 0.00 5.28
275 276 6.477688 TCTTATATGCGAACTAAAAAGGACCG 59.522 38.462 0.00 0.00 0.00 4.79
276 277 7.781548 TCTTATATGCGAACTAAAAAGGACC 57.218 36.000 0.00 0.00 0.00 4.46
283 284 9.594478 TCAGTCAAATCTTATATGCGAACTAAA 57.406 29.630 0.00 0.00 0.00 1.85
284 285 9.594478 TTCAGTCAAATCTTATATGCGAACTAA 57.406 29.630 0.00 0.00 0.00 2.24
285 286 9.249457 CTTCAGTCAAATCTTATATGCGAACTA 57.751 33.333 0.00 0.00 0.00 2.24
286 287 7.766278 ACTTCAGTCAAATCTTATATGCGAACT 59.234 33.333 0.00 0.00 0.00 3.01
287 288 7.910304 ACTTCAGTCAAATCTTATATGCGAAC 58.090 34.615 0.00 0.00 0.00 3.95
288 289 8.131455 GACTTCAGTCAAATCTTATATGCGAA 57.869 34.615 1.86 0.00 44.18 4.70
289 290 7.700322 GACTTCAGTCAAATCTTATATGCGA 57.300 36.000 1.86 0.00 44.18 5.10
304 305 7.409465 AACTTTACGAGAATTGACTTCAGTC 57.591 36.000 0.00 0.00 44.97 3.51
305 306 7.494625 TCAAACTTTACGAGAATTGACTTCAGT 59.505 33.333 0.00 0.00 36.24 3.41
306 307 7.794349 GTCAAACTTTACGAGAATTGACTTCAG 59.206 37.037 15.38 0.00 43.80 3.02
307 308 7.254658 GGTCAAACTTTACGAGAATTGACTTCA 60.255 37.037 18.80 0.00 44.97 3.02
308 309 7.070183 GGTCAAACTTTACGAGAATTGACTTC 58.930 38.462 18.80 0.00 44.97 3.01
309 310 6.540914 TGGTCAAACTTTACGAGAATTGACTT 59.459 34.615 18.80 0.00 44.97 3.01
310 311 6.053005 TGGTCAAACTTTACGAGAATTGACT 58.947 36.000 18.80 0.00 44.97 3.41
311 312 6.295039 TGGTCAAACTTTACGAGAATTGAC 57.705 37.500 14.81 14.81 44.93 3.18
312 313 6.721321 GTTGGTCAAACTTTACGAGAATTGA 58.279 36.000 0.00 0.00 35.75 2.57
313 314 6.969669 GTTGGTCAAACTTTACGAGAATTG 57.030 37.500 0.00 0.00 35.75 2.32
326 327 8.379902 CACATTTTTCTACAAAGTTGGTCAAAC 58.620 33.333 0.00 0.00 39.24 2.93
327 328 7.064016 GCACATTTTTCTACAAAGTTGGTCAAA 59.936 33.333 0.00 0.00 0.00 2.69
328 329 6.533367 GCACATTTTTCTACAAAGTTGGTCAA 59.467 34.615 0.00 0.00 0.00 3.18
329 330 6.039616 GCACATTTTTCTACAAAGTTGGTCA 58.960 36.000 0.00 0.00 0.00 4.02
330 331 5.462068 GGCACATTTTTCTACAAAGTTGGTC 59.538 40.000 0.00 0.00 0.00 4.02
331 332 5.105146 TGGCACATTTTTCTACAAAGTTGGT 60.105 36.000 0.00 0.00 0.00 3.67
332 333 5.355596 TGGCACATTTTTCTACAAAGTTGG 58.644 37.500 0.00 0.00 0.00 3.77
333 334 6.312426 TGTTGGCACATTTTTCTACAAAGTTG 59.688 34.615 0.00 0.00 39.30 3.16
334 335 6.402222 TGTTGGCACATTTTTCTACAAAGTT 58.598 32.000 0.00 0.00 39.30 2.66
335 336 5.971763 TGTTGGCACATTTTTCTACAAAGT 58.028 33.333 0.00 0.00 39.30 2.66
348 349 3.827876 TCAGATTGTGAATGTTGGCACAT 59.172 39.130 0.00 0.00 46.34 3.21
349 350 3.220940 TCAGATTGTGAATGTTGGCACA 58.779 40.909 0.00 0.00 42.73 4.57
350 351 3.921119 TCAGATTGTGAATGTTGGCAC 57.079 42.857 0.00 0.00 35.63 5.01
351 352 4.933505 TTTCAGATTGTGAATGTTGGCA 57.066 36.364 0.00 0.00 44.89 4.92
352 353 5.472148 TGATTTCAGATTGTGAATGTTGGC 58.528 37.500 0.00 0.00 44.89 4.52
353 354 9.811995 ATATTGATTTCAGATTGTGAATGTTGG 57.188 29.630 0.00 0.00 44.89 3.77
381 382 9.725019 TGAAATTTAAGTCATGACACATCTAGT 57.275 29.630 27.02 6.40 0.00 2.57
409 410 8.917088 ACATCTGCCATGCTAAAGTTATAAAAT 58.083 29.630 0.00 0.00 0.00 1.82
410 411 8.292444 ACATCTGCCATGCTAAAGTTATAAAA 57.708 30.769 0.00 0.00 0.00 1.52
411 412 7.880160 ACATCTGCCATGCTAAAGTTATAAA 57.120 32.000 0.00 0.00 0.00 1.40
412 413 7.555914 TCAACATCTGCCATGCTAAAGTTATAA 59.444 33.333 0.00 0.00 0.00 0.98
413 414 7.053498 TCAACATCTGCCATGCTAAAGTTATA 58.947 34.615 0.00 0.00 0.00 0.98
414 415 5.887598 TCAACATCTGCCATGCTAAAGTTAT 59.112 36.000 0.00 0.00 0.00 1.89
415 416 5.252547 TCAACATCTGCCATGCTAAAGTTA 58.747 37.500 0.00 0.00 0.00 2.24
416 417 4.081406 TCAACATCTGCCATGCTAAAGTT 58.919 39.130 0.00 0.00 0.00 2.66
417 418 3.689347 TCAACATCTGCCATGCTAAAGT 58.311 40.909 0.00 0.00 0.00 2.66
418 419 4.913335 ATCAACATCTGCCATGCTAAAG 57.087 40.909 0.00 0.00 0.00 1.85
419 420 6.964807 AATATCAACATCTGCCATGCTAAA 57.035 33.333 0.00 0.00 0.00 1.85
420 421 6.964807 AAATATCAACATCTGCCATGCTAA 57.035 33.333 0.00 0.00 0.00 3.09
421 422 6.964807 AAAATATCAACATCTGCCATGCTA 57.035 33.333 0.00 0.00 0.00 3.49
422 423 5.864418 AAAATATCAACATCTGCCATGCT 57.136 34.783 0.00 0.00 0.00 3.79
477 478 9.671279 TCTGCATATTAGAATTCTTTGAAGTCA 57.329 29.630 14.36 3.90 0.00 3.41
479 480 9.678260 ACTCTGCATATTAGAATTCTTTGAAGT 57.322 29.630 14.36 8.33 0.00 3.01
489 490 9.343539 GGTCCTTTTTACTCTGCATATTAGAAT 57.656 33.333 0.00 0.00 0.00 2.40
490 491 7.494625 CGGTCCTTTTTACTCTGCATATTAGAA 59.505 37.037 0.00 0.00 0.00 2.10
491 492 6.984474 CGGTCCTTTTTACTCTGCATATTAGA 59.016 38.462 0.00 0.00 0.00 2.10
492 493 6.984474 TCGGTCCTTTTTACTCTGCATATTAG 59.016 38.462 0.00 0.00 0.00 1.73
493 494 6.880484 TCGGTCCTTTTTACTCTGCATATTA 58.120 36.000 0.00 0.00 0.00 0.98
494 495 5.741011 TCGGTCCTTTTTACTCTGCATATT 58.259 37.500 0.00 0.00 0.00 1.28
495 496 5.353394 TCGGTCCTTTTTACTCTGCATAT 57.647 39.130 0.00 0.00 0.00 1.78
496 497 4.811969 TCGGTCCTTTTTACTCTGCATA 57.188 40.909 0.00 0.00 0.00 3.14
497 498 3.695830 TCGGTCCTTTTTACTCTGCAT 57.304 42.857 0.00 0.00 0.00 3.96
498 499 3.478857 TTCGGTCCTTTTTACTCTGCA 57.521 42.857 0.00 0.00 0.00 4.41
499 500 4.823790 TTTTCGGTCCTTTTTACTCTGC 57.176 40.909 0.00 0.00 0.00 4.26
500 501 6.373186 ACTTTTTCGGTCCTTTTTACTCTG 57.627 37.500 0.00 0.00 0.00 3.35
501 502 7.935210 TGATACTTTTTCGGTCCTTTTTACTCT 59.065 33.333 0.00 0.00 0.00 3.24
502 503 8.091385 TGATACTTTTTCGGTCCTTTTTACTC 57.909 34.615 0.00 0.00 0.00 2.59
503 504 8.631480 ATGATACTTTTTCGGTCCTTTTTACT 57.369 30.769 0.00 0.00 0.00 2.24
508 509 8.784043 GCATATATGATACTTTTTCGGTCCTTT 58.216 33.333 17.10 0.00 0.00 3.11
509 510 7.390718 GGCATATATGATACTTTTTCGGTCCTT 59.609 37.037 17.10 0.00 0.00 3.36
510 511 6.879458 GGCATATATGATACTTTTTCGGTCCT 59.121 38.462 17.10 0.00 0.00 3.85
511 512 6.653320 TGGCATATATGATACTTTTTCGGTCC 59.347 38.462 17.10 3.47 0.00 4.46
512 513 7.667043 TGGCATATATGATACTTTTTCGGTC 57.333 36.000 17.10 0.00 0.00 4.79
513 514 8.635765 ATTGGCATATATGATACTTTTTCGGT 57.364 30.769 17.10 0.00 0.00 4.69
514 515 9.345517 CAATTGGCATATATGATACTTTTTCGG 57.654 33.333 17.10 0.00 0.00 4.30
515 516 9.897744 ACAATTGGCATATATGATACTTTTTCG 57.102 29.630 17.10 0.00 0.00 3.46
524 525 9.797642 TTCTGTCTTACAATTGGCATATATGAT 57.202 29.630 17.10 0.00 0.00 2.45
525 526 9.056005 GTTCTGTCTTACAATTGGCATATATGA 57.944 33.333 17.10 0.00 0.00 2.15
526 527 8.292448 GGTTCTGTCTTACAATTGGCATATATG 58.708 37.037 10.83 8.45 0.00 1.78
527 528 7.998383 TGGTTCTGTCTTACAATTGGCATATAT 59.002 33.333 10.83 0.00 0.00 0.86
528 529 7.342581 TGGTTCTGTCTTACAATTGGCATATA 58.657 34.615 10.83 0.00 0.00 0.86
529 530 6.186957 TGGTTCTGTCTTACAATTGGCATAT 58.813 36.000 10.83 0.00 0.00 1.78
530 531 5.565509 TGGTTCTGTCTTACAATTGGCATA 58.434 37.500 10.83 0.00 0.00 3.14
531 532 4.406456 TGGTTCTGTCTTACAATTGGCAT 58.594 39.130 10.83 0.00 0.00 4.40
532 533 3.826524 TGGTTCTGTCTTACAATTGGCA 58.173 40.909 10.83 0.00 0.00 4.92
533 534 5.163513 CAATGGTTCTGTCTTACAATTGGC 58.836 41.667 10.83 0.00 33.80 4.52
534 535 6.331369 ACAATGGTTCTGTCTTACAATTGG 57.669 37.500 10.83 0.00 39.12 3.16
535 536 7.870826 TGTACAATGGTTCTGTCTTACAATTG 58.129 34.615 3.24 3.24 40.14 2.32
536 537 8.514594 CATGTACAATGGTTCTGTCTTACAATT 58.485 33.333 0.00 0.00 0.00 2.32
537 538 7.665559 ACATGTACAATGGTTCTGTCTTACAAT 59.334 33.333 0.00 0.00 0.00 2.71
538 539 6.995686 ACATGTACAATGGTTCTGTCTTACAA 59.004 34.615 0.00 0.00 0.00 2.41
539 540 6.530120 ACATGTACAATGGTTCTGTCTTACA 58.470 36.000 0.00 0.00 0.00 2.41
540 541 6.183360 CGACATGTACAATGGTTCTGTCTTAC 60.183 42.308 17.05 0.00 31.63 2.34
541 542 5.867174 CGACATGTACAATGGTTCTGTCTTA 59.133 40.000 17.05 0.00 31.63 2.10
542 543 4.690748 CGACATGTACAATGGTTCTGTCTT 59.309 41.667 17.05 0.00 31.63 3.01
543 544 4.245660 CGACATGTACAATGGTTCTGTCT 58.754 43.478 17.05 0.00 31.63 3.41
544 545 3.994392 ACGACATGTACAATGGTTCTGTC 59.006 43.478 11.70 11.70 0.00 3.51
545 546 4.002906 ACGACATGTACAATGGTTCTGT 57.997 40.909 0.00 0.00 0.00 3.41
546 547 5.444087 CGTTACGACATGTACAATGGTTCTG 60.444 44.000 0.00 0.00 31.20 3.02
547 548 4.624024 CGTTACGACATGTACAATGGTTCT 59.376 41.667 0.00 0.00 31.20 3.01
548 549 4.201647 CCGTTACGACATGTACAATGGTTC 60.202 45.833 6.24 0.00 31.20 3.62
549 550 3.680937 CCGTTACGACATGTACAATGGTT 59.319 43.478 6.24 0.00 31.20 3.67
550 551 3.255725 CCGTTACGACATGTACAATGGT 58.744 45.455 6.24 1.39 31.20 3.55
551 552 2.605818 CCCGTTACGACATGTACAATGG 59.394 50.000 6.24 7.97 31.20 3.16
552 553 3.255725 ACCCGTTACGACATGTACAATG 58.744 45.455 6.24 1.63 31.20 2.82
553 554 3.598019 ACCCGTTACGACATGTACAAT 57.402 42.857 6.24 0.00 31.20 2.71
554 555 3.673052 GCTACCCGTTACGACATGTACAA 60.673 47.826 6.24 0.00 31.20 2.41
555 556 2.159393 GCTACCCGTTACGACATGTACA 60.159 50.000 6.24 0.00 31.20 2.90
556 557 2.159393 TGCTACCCGTTACGACATGTAC 60.159 50.000 6.24 0.00 31.20 2.90
557 558 2.090760 TGCTACCCGTTACGACATGTA 58.909 47.619 6.24 1.65 0.00 2.29
558 559 0.889994 TGCTACCCGTTACGACATGT 59.110 50.000 6.24 0.00 0.00 3.21
559 560 1.999048 TTGCTACCCGTTACGACATG 58.001 50.000 6.24 0.00 0.00 3.21
560 561 2.973694 ATTGCTACCCGTTACGACAT 57.026 45.000 6.24 0.00 0.00 3.06
561 562 2.747396 AATTGCTACCCGTTACGACA 57.253 45.000 6.24 0.00 0.00 4.35
562 563 2.995258 TGAAATTGCTACCCGTTACGAC 59.005 45.455 6.24 0.00 0.00 4.34
563 564 3.316071 TGAAATTGCTACCCGTTACGA 57.684 42.857 6.24 0.00 0.00 3.43
564 565 3.186817 TGTTGAAATTGCTACCCGTTACG 59.813 43.478 0.00 0.00 0.00 3.18
565 566 4.023878 TGTGTTGAAATTGCTACCCGTTAC 60.024 41.667 0.00 0.00 0.00 2.50
587 588 2.774234 AGTGGGTAGGGTCAGATTGATG 59.226 50.000 0.00 0.00 0.00 3.07
734 735 4.314440 GCTGGCGTGTGAGGTCCA 62.314 66.667 0.00 0.00 0.00 4.02
744 745 1.528076 TTGTTGGTGATGCTGGCGT 60.528 52.632 0.00 0.00 0.00 5.68
765 773 1.592223 GGAGGAGACGTTGGACCAG 59.408 63.158 0.00 0.00 0.00 4.00
826 834 2.769602 TAGCCTAGAAGTTCGGGGAT 57.230 50.000 17.38 14.41 0.00 3.85
875 883 0.108329 GCGGATGAGAAGAAACGGGA 60.108 55.000 0.00 0.00 0.00 5.14
956 966 0.456221 TTGATTCGCGAGAGGAGGAC 59.544 55.000 9.59 0.00 43.69 3.85
1055 1065 4.436998 AGAAGAGGCCCGCGAACG 62.437 66.667 8.23 0.00 39.67 3.95
1233 1267 0.893727 TCGTGTCCAGCAGCTCTGTA 60.894 55.000 0.00 0.00 41.25 2.74
1236 1270 2.644212 CCTCGTGTCCAGCAGCTCT 61.644 63.158 0.00 0.00 0.00 4.09
1324 1364 6.040616 GTCTTCCTCCTATTCTTATTCACGGA 59.959 42.308 0.00 0.00 0.00 4.69
1332 1372 3.383825 GGTGCGTCTTCCTCCTATTCTTA 59.616 47.826 0.00 0.00 0.00 2.10
1338 1378 1.592400 CGTGGTGCGTCTTCCTCCTA 61.592 60.000 0.00 0.00 35.54 2.94
1442 1500 3.617263 CGGTAATTACACAAGAGCAGTCC 59.383 47.826 17.16 0.00 0.00 3.85
1446 1504 1.996898 CGCGGTAATTACACAAGAGCA 59.003 47.619 17.16 0.00 0.00 4.26
1462 1520 1.078001 ATAGGGGGAAACAACGCGG 60.078 57.895 12.47 0.00 0.00 6.46
1463 1521 0.107848 AGATAGGGGGAAACAACGCG 60.108 55.000 3.53 3.53 0.00 6.01
1464 1522 1.664873 GAGATAGGGGGAAACAACGC 58.335 55.000 0.00 0.00 0.00 4.84
1465 1523 1.472728 CGGAGATAGGGGGAAACAACG 60.473 57.143 0.00 0.00 0.00 4.10
1466 1524 1.746171 GCGGAGATAGGGGGAAACAAC 60.746 57.143 0.00 0.00 0.00 3.32
1467 1525 0.544697 GCGGAGATAGGGGGAAACAA 59.455 55.000 0.00 0.00 0.00 2.83
1468 1526 1.342672 GGCGGAGATAGGGGGAAACA 61.343 60.000 0.00 0.00 0.00 2.83
1469 1527 1.054978 AGGCGGAGATAGGGGGAAAC 61.055 60.000 0.00 0.00 0.00 2.78
1470 1528 0.763223 GAGGCGGAGATAGGGGGAAA 60.763 60.000 0.00 0.00 0.00 3.13
1471 1529 1.152312 GAGGCGGAGATAGGGGGAA 60.152 63.158 0.00 0.00 0.00 3.97
1472 1530 2.082836 GAGAGGCGGAGATAGGGGGA 62.083 65.000 0.00 0.00 0.00 4.81
1473 1531 1.608046 GAGAGGCGGAGATAGGGGG 60.608 68.421 0.00 0.00 0.00 5.40
1474 1532 0.178947 AAGAGAGGCGGAGATAGGGG 60.179 60.000 0.00 0.00 0.00 4.79
1475 1533 1.253100 GAAGAGAGGCGGAGATAGGG 58.747 60.000 0.00 0.00 0.00 3.53
1476 1534 1.885887 CTGAAGAGAGGCGGAGATAGG 59.114 57.143 0.00 0.00 0.00 2.57
1477 1535 2.813754 CTCTGAAGAGAGGCGGAGATAG 59.186 54.545 0.74 0.00 44.74 2.08
1478 1536 2.439880 TCTCTGAAGAGAGGCGGAGATA 59.560 50.000 5.92 0.00 45.48 1.98
1479 1537 1.214175 TCTCTGAAGAGAGGCGGAGAT 59.786 52.381 5.92 0.00 45.48 2.75
1480 1538 0.621082 TCTCTGAAGAGAGGCGGAGA 59.379 55.000 5.92 0.00 45.48 3.71
1481 1539 3.183130 TCTCTGAAGAGAGGCGGAG 57.817 57.895 5.92 0.00 45.48 4.63
1527 1586 2.966050 ACCATCTGCTTCGTCTTTCTC 58.034 47.619 0.00 0.00 0.00 2.87
1684 1744 9.737427 GATCAATTCTTCGATCTTGTCTAGTTA 57.263 33.333 0.00 0.00 36.04 2.24
1685 1745 7.708752 GGATCAATTCTTCGATCTTGTCTAGTT 59.291 37.037 0.00 0.00 38.47 2.24
1686 1746 7.147828 TGGATCAATTCTTCGATCTTGTCTAGT 60.148 37.037 0.00 0.00 38.47 2.57
1687 1747 7.205992 TGGATCAATTCTTCGATCTTGTCTAG 58.794 38.462 0.00 0.00 38.47 2.43
1688 1748 7.112452 TGGATCAATTCTTCGATCTTGTCTA 57.888 36.000 0.00 0.00 38.47 2.59
1689 1749 5.982356 TGGATCAATTCTTCGATCTTGTCT 58.018 37.500 0.00 0.00 38.47 3.41
1690 1750 6.073331 GGATGGATCAATTCTTCGATCTTGTC 60.073 42.308 0.00 0.00 38.47 3.18
1691 1751 5.762218 GGATGGATCAATTCTTCGATCTTGT 59.238 40.000 0.00 0.00 38.47 3.16
1692 1752 5.996513 AGGATGGATCAATTCTTCGATCTTG 59.003 40.000 0.00 0.00 38.47 3.02
1693 1753 5.996513 CAGGATGGATCAATTCTTCGATCTT 59.003 40.000 0.00 0.90 38.47 2.40
1694 1754 5.306419 TCAGGATGGATCAATTCTTCGATCT 59.694 40.000 0.00 0.00 38.47 2.75
1695 1755 5.407995 GTCAGGATGGATCAATTCTTCGATC 59.592 44.000 0.00 0.00 37.83 3.69
1696 1756 5.303971 GTCAGGATGGATCAATTCTTCGAT 58.696 41.667 0.00 0.00 36.16 3.59
1697 1757 4.697514 GTCAGGATGGATCAATTCTTCGA 58.302 43.478 0.00 0.00 36.16 3.71
1698 1758 3.492383 CGTCAGGATGGATCAATTCTTCG 59.508 47.826 0.00 0.00 36.16 3.79
1699 1759 4.446371 ACGTCAGGATGGATCAATTCTTC 58.554 43.478 0.00 0.00 36.16 2.87
1700 1760 4.494091 ACGTCAGGATGGATCAATTCTT 57.506 40.909 0.00 0.00 36.16 2.52
1701 1761 4.499865 CGTACGTCAGGATGGATCAATTCT 60.500 45.833 7.22 0.00 36.16 2.40
1702 1762 3.736252 CGTACGTCAGGATGGATCAATTC 59.264 47.826 7.22 0.00 36.16 2.17
1703 1763 3.717707 CGTACGTCAGGATGGATCAATT 58.282 45.455 7.22 0.00 36.16 2.32
1704 1764 2.545952 GCGTACGTCAGGATGGATCAAT 60.546 50.000 17.90 0.00 36.16 2.57
1705 1765 1.202371 GCGTACGTCAGGATGGATCAA 60.202 52.381 17.90 0.00 36.16 2.57
1706 1766 0.384309 GCGTACGTCAGGATGGATCA 59.616 55.000 17.90 0.00 36.16 2.92
1707 1767 0.318784 GGCGTACGTCAGGATGGATC 60.319 60.000 16.32 0.00 36.16 3.36
1708 1768 1.740285 GGCGTACGTCAGGATGGAT 59.260 57.895 16.32 0.00 36.16 3.41
1709 1769 2.767445 CGGCGTACGTCAGGATGGA 61.767 63.158 21.20 0.00 37.93 3.41
1710 1770 2.278596 CGGCGTACGTCAGGATGG 60.279 66.667 21.20 0.00 37.93 3.51
1711 1771 2.071844 ATCCGGCGTACGTCAGGATG 62.072 60.000 31.07 13.35 39.94 3.51
1712 1772 1.389609 AATCCGGCGTACGTCAGGAT 61.390 55.000 28.32 28.32 42.93 3.24
1713 1773 1.996786 GAATCCGGCGTACGTCAGGA 61.997 60.000 26.91 26.91 42.24 3.86
1714 1774 1.588139 GAATCCGGCGTACGTCAGG 60.588 63.158 21.20 20.47 42.24 3.86
1715 1775 1.937846 CGAATCCGGCGTACGTCAG 60.938 63.158 21.20 9.00 42.24 3.51
1716 1776 2.100797 CGAATCCGGCGTACGTCA 59.899 61.111 21.20 0.69 42.24 4.35
1726 1786 2.270297 CTTTTGGGCTGCCGAATCCG 62.270 60.000 17.00 5.05 0.00 4.18
1727 1787 1.512694 CTTTTGGGCTGCCGAATCC 59.487 57.895 17.00 0.67 0.00 3.01
1728 1788 1.512694 CCTTTTGGGCTGCCGAATC 59.487 57.895 17.00 1.08 35.46 2.52
1729 1789 3.698765 CCTTTTGGGCTGCCGAAT 58.301 55.556 17.00 0.00 35.46 3.34
1738 1798 3.716872 TCCTAATCTCCTAGCCTTTTGGG 59.283 47.826 0.00 0.00 40.82 4.12
1739 1799 4.410555 ACTCCTAATCTCCTAGCCTTTTGG 59.589 45.833 0.00 0.00 44.18 3.28
1740 1800 5.622346 ACTCCTAATCTCCTAGCCTTTTG 57.378 43.478 0.00 0.00 0.00 2.44
1741 1801 5.302313 CGTACTCCTAATCTCCTAGCCTTTT 59.698 44.000 0.00 0.00 0.00 2.27
1742 1802 4.828387 CGTACTCCTAATCTCCTAGCCTTT 59.172 45.833 0.00 0.00 0.00 3.11
1743 1803 4.141205 ACGTACTCCTAATCTCCTAGCCTT 60.141 45.833 0.00 0.00 0.00 4.35
1744 1804 3.395273 ACGTACTCCTAATCTCCTAGCCT 59.605 47.826 0.00 0.00 0.00 4.58
1745 1805 3.753815 ACGTACTCCTAATCTCCTAGCC 58.246 50.000 0.00 0.00 0.00 3.93
1746 1806 4.579753 ACAACGTACTCCTAATCTCCTAGC 59.420 45.833 0.00 0.00 0.00 3.42
1747 1807 5.050227 CGACAACGTACTCCTAATCTCCTAG 60.050 48.000 0.00 0.00 34.56 3.02
1765 1825 4.398549 TGCAAGCAAACTATACGACAAC 57.601 40.909 0.00 0.00 0.00 3.32
1767 1827 4.661993 CTTGCAAGCAAACTATACGACA 57.338 40.909 14.65 0.00 35.33 4.35
1790 1850 4.157607 CCAAGAACCTTGGCGTGT 57.842 55.556 12.20 0.00 32.18 4.49
1798 1858 0.694771 TCAGAGCATGCCAAGAACCT 59.305 50.000 15.66 0.00 0.00 3.50
1799 1859 1.538047 TTCAGAGCATGCCAAGAACC 58.462 50.000 15.66 0.00 0.00 3.62
1801 1861 4.525487 AGAAAATTCAGAGCATGCCAAGAA 59.475 37.500 15.66 15.68 0.00 2.52
1846 1907 9.528489 TGGATTAAAAGGCTAGTTTTAGAACAT 57.472 29.630 0.00 0.00 38.26 2.71
1860 1921 5.823045 AGTGTACATAGCTGGATTAAAAGGC 59.177 40.000 0.00 0.00 0.00 4.35
1882 1943 1.337260 CCGTGAAAGAGCACTGCTAGT 60.337 52.381 2.71 0.00 39.88 2.57
1976 2377 7.113704 AGTGCGAGTAACATAAAACTTACAC 57.886 36.000 0.00 0.00 34.55 2.90
2009 2413 0.671251 CCTCAGACATCTAGGCGGAC 59.329 60.000 0.00 0.00 0.00 4.79
2012 2416 3.742433 AAATCCTCAGACATCTAGGCG 57.258 47.619 0.00 0.00 0.00 5.52
2019 2423 7.429374 TGATCAAGACTAAATCCTCAGACAT 57.571 36.000 0.00 0.00 0.00 3.06
2089 2493 3.399330 AGTGTTGATCCTTACAACGGTG 58.601 45.455 0.00 0.00 46.96 4.94
2099 2503 8.472413 CCATTTTCAATATTGAGTGTTGATCCT 58.528 33.333 17.28 0.00 37.71 3.24
2149 2553 0.604073 TGTCATCTCCGCGTTAACCA 59.396 50.000 4.92 0.00 0.00 3.67
2160 2564 4.384056 CACCCATATCAGGTTGTCATCTC 58.616 47.826 0.00 0.00 34.56 2.75
2169 2573 3.318313 CTTAGTCCCACCCATATCAGGT 58.682 50.000 0.00 0.00 38.48 4.00
2242 2647 5.163652 CCCCTTATGATCAACGGAAGAAAAC 60.164 44.000 0.00 0.00 0.00 2.43
2251 2656 3.560636 AGGTTCCCCTTATGATCAACG 57.439 47.619 0.00 0.00 38.13 4.10
2335 2740 2.525629 TCGGGTGGAGTTCCTGCA 60.526 61.111 0.00 0.00 36.82 4.41
2351 2756 3.644966 TGGGTGGAACTTATCATGGTC 57.355 47.619 0.00 0.00 36.74 4.02
2360 2765 0.822121 GGACGCTTTGGGTGGAACTT 60.822 55.000 0.00 0.00 36.74 2.66
2386 2791 5.230182 ACTATGCATCCACATATGTACGTG 58.770 41.667 8.32 8.38 32.26 4.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.