Multiple sequence alignment - TraesCS5A01G332500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G332500 chr5A 100.000 2431 0 0 1 2431 540849410 540851840 0.000000e+00 4490.0
1 TraesCS5A01G332500 chr7D 97.722 2063 39 6 375 2431 195367464 195365404 0.000000e+00 3542.0
2 TraesCS5A01G332500 chr7D 97.685 1728 37 2 707 2431 446941249 446939522 0.000000e+00 2966.0
3 TraesCS5A01G332500 chr7D 97.245 363 8 2 386 748 446941608 446941248 4.440000e-172 614.0
4 TraesCS5A01G332500 chr1D 97.524 2060 47 3 375 2431 462977279 462979337 0.000000e+00 3518.0
5 TraesCS5A01G332500 chr1D 83.333 294 33 9 375 665 79086011 79085731 8.620000e-65 257.0
6 TraesCS5A01G332500 chr5D 97.296 2071 38 6 375 2431 552051829 552053895 0.000000e+00 3498.0
7 TraesCS5A01G332500 chr5D 90.476 168 16 0 135 302 547239709 547239876 3.150000e-54 222.0
8 TraesCS5A01G332500 chr5D 90.909 165 15 0 137 301 550299200 550299364 3.150000e-54 222.0
9 TraesCS5A01G332500 chrUn 97.326 2057 51 3 375 2431 90492985 90490933 0.000000e+00 3491.0
10 TraesCS5A01G332500 chrUn 94.790 1094 51 2 1168 2260 248893299 248892211 0.000000e+00 1700.0
11 TraesCS5A01G332500 chrUn 94.678 714 32 3 374 1086 248895296 248894588 0.000000e+00 1103.0
12 TraesCS5A01G332500 chrUn 97.054 577 15 2 1686 2261 248894215 248893640 0.000000e+00 970.0
13 TraesCS5A01G332500 chr6B 94.982 1096 49 3 1168 2260 92402266 92403358 0.000000e+00 1714.0
14 TraesCS5A01G332500 chr6B 86.869 198 20 4 919 1115 31784794 31784986 1.460000e-52 217.0
15 TraesCS5A01G332500 chr6B 89.080 174 19 0 136 309 35233327 35233154 1.460000e-52 217.0
16 TraesCS5A01G332500 chr6B 100.000 43 0 0 2389 2431 648274641 648274683 2.000000e-11 80.5
17 TraesCS5A01G332500 chr6A 94.973 1094 51 3 1170 2260 612594870 612593778 0.000000e+00 1712.0
18 TraesCS5A01G332500 chr6A 88.144 1358 121 18 1036 2391 335806016 335807335 0.000000e+00 1580.0
19 TraesCS5A01G332500 chr6A 89.143 175 18 1 136 309 230694099 230693925 1.460000e-52 217.0
20 TraesCS5A01G332500 chr1A 95.964 892 34 1 610 1501 7109442 7108553 0.000000e+00 1447.0
21 TraesCS5A01G332500 chr1A 96.379 580 17 2 1686 2261 7108552 7107973 0.000000e+00 952.0
22 TraesCS5A01G332500 chr1A 93.730 319 17 2 371 688 7109760 7109444 2.190000e-130 475.0
23 TraesCS5A01G332500 chr7B 93.377 302 18 2 713 1014 72035320 72035021 1.710000e-121 446.0
24 TraesCS5A01G332500 chr7B 91.667 252 21 0 1036 1287 737090550 737090801 1.380000e-92 350.0
25 TraesCS5A01G332500 chr7B 91.339 254 22 0 1034 1287 737612002 737612255 4.970000e-92 348.0
26 TraesCS5A01G332500 chr7B 86.869 198 20 4 919 1115 286040666 286040858 1.460000e-52 217.0
27 TraesCS5A01G332500 chr3B 93.046 302 18 3 713 1014 500511450 500511748 2.870000e-119 438.0
28 TraesCS5A01G332500 chr3B 81.210 463 44 19 374 835 387431840 387431420 1.390000e-87 333.0
29 TraesCS5A01G332500 chr2D 91.124 169 15 0 136 304 142056784 142056952 1.880000e-56 230.0
30 TraesCS5A01G332500 chr3D 89.655 174 18 0 129 302 472442838 472443011 3.150000e-54 222.0
31 TraesCS5A01G332500 chr4B 90.419 167 16 0 137 303 54366998 54367164 1.130000e-53 220.0
32 TraesCS5A01G332500 chr4B 100.000 43 0 0 2389 2431 128953657 128953615 2.000000e-11 80.5
33 TraesCS5A01G332500 chr4A 89.595 173 17 1 143 315 189614485 189614314 4.070000e-53 219.0
34 TraesCS5A01G332500 chr5B 86.387 191 25 1 116 305 544519175 544518985 8.810000e-50 207.0
35 TraesCS5A01G332500 chr5B 100.000 43 0 0 2389 2431 347978712 347978754 2.000000e-11 80.5
36 TraesCS5A01G332500 chr2B 100.000 43 0 0 2389 2431 99542953 99542911 2.000000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G332500 chr5A 540849410 540851840 2430 False 4490.000000 4490 100.000000 1 2431 1 chr5A.!!$F1 2430
1 TraesCS5A01G332500 chr7D 195365404 195367464 2060 True 3542.000000 3542 97.722000 375 2431 1 chr7D.!!$R1 2056
2 TraesCS5A01G332500 chr7D 446939522 446941608 2086 True 1790.000000 2966 97.465000 386 2431 2 chr7D.!!$R2 2045
3 TraesCS5A01G332500 chr1D 462977279 462979337 2058 False 3518.000000 3518 97.524000 375 2431 1 chr1D.!!$F1 2056
4 TraesCS5A01G332500 chr5D 552051829 552053895 2066 False 3498.000000 3498 97.296000 375 2431 1 chr5D.!!$F3 2056
5 TraesCS5A01G332500 chrUn 90490933 90492985 2052 True 3491.000000 3491 97.326000 375 2431 1 chrUn.!!$R1 2056
6 TraesCS5A01G332500 chrUn 248892211 248895296 3085 True 1257.666667 1700 95.507333 374 2261 3 chrUn.!!$R2 1887
7 TraesCS5A01G332500 chr6B 92402266 92403358 1092 False 1714.000000 1714 94.982000 1168 2260 1 chr6B.!!$F2 1092
8 TraesCS5A01G332500 chr6A 612593778 612594870 1092 True 1712.000000 1712 94.973000 1170 2260 1 chr6A.!!$R2 1090
9 TraesCS5A01G332500 chr6A 335806016 335807335 1319 False 1580.000000 1580 88.144000 1036 2391 1 chr6A.!!$F1 1355
10 TraesCS5A01G332500 chr1A 7107973 7109760 1787 True 958.000000 1447 95.357667 371 2261 3 chr1A.!!$R1 1890


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
116 117 0.034059 CGTGTCCTTGAGGTTGCTCT 59.966 55.0 0.0 0.0 36.34 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1709 3088 0.10412 GGTTTCAAAGTTTGGCCGCT 59.896 50.0 15.47 0.0 0.0 5.52 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.473643 CCAAAGAAGTGTGGCGGA 57.526 55.556 0.00 0.00 0.00 5.54
19 20 2.946947 CCAAAGAAGTGTGGCGGAT 58.053 52.632 0.00 0.00 0.00 4.18
20 21 0.804989 CCAAAGAAGTGTGGCGGATC 59.195 55.000 0.00 0.00 0.00 3.36
21 22 1.611673 CCAAAGAAGTGTGGCGGATCT 60.612 52.381 0.00 0.00 0.00 2.75
22 23 2.154462 CAAAGAAGTGTGGCGGATCTT 58.846 47.619 0.00 0.00 31.98 2.40
23 24 1.813513 AAGAAGTGTGGCGGATCTTG 58.186 50.000 0.00 0.00 0.00 3.02
24 25 0.976641 AGAAGTGTGGCGGATCTTGA 59.023 50.000 0.00 0.00 0.00 3.02
25 26 1.079503 GAAGTGTGGCGGATCTTGAC 58.920 55.000 0.00 0.00 0.00 3.18
26 27 0.396435 AAGTGTGGCGGATCTTGACA 59.604 50.000 0.00 0.00 0.00 3.58
27 28 0.036952 AGTGTGGCGGATCTTGACAG 60.037 55.000 0.00 0.00 0.00 3.51
28 29 0.320771 GTGTGGCGGATCTTGACAGT 60.321 55.000 0.00 0.00 0.00 3.55
29 30 0.037326 TGTGGCGGATCTTGACAGTC 60.037 55.000 0.00 0.00 0.00 3.51
30 31 0.247736 GTGGCGGATCTTGACAGTCT 59.752 55.000 1.31 0.00 0.00 3.24
31 32 0.532573 TGGCGGATCTTGACAGTCTC 59.467 55.000 1.31 0.00 0.00 3.36
32 33 0.526524 GGCGGATCTTGACAGTCTCG 60.527 60.000 1.31 0.00 0.00 4.04
33 34 0.452184 GCGGATCTTGACAGTCTCGA 59.548 55.000 1.31 0.00 0.00 4.04
34 35 1.135373 GCGGATCTTGACAGTCTCGAA 60.135 52.381 1.31 0.00 0.00 3.71
35 36 2.520979 CGGATCTTGACAGTCTCGAAC 58.479 52.381 1.31 0.00 0.00 3.95
36 37 2.162608 CGGATCTTGACAGTCTCGAACT 59.837 50.000 1.31 0.00 39.44 3.01
37 38 3.729462 CGGATCTTGACAGTCTCGAACTC 60.729 52.174 1.31 0.00 35.45 3.01
38 39 3.442273 GGATCTTGACAGTCTCGAACTCT 59.558 47.826 1.31 0.00 35.45 3.24
39 40 4.438200 GGATCTTGACAGTCTCGAACTCTC 60.438 50.000 1.31 0.00 35.45 3.20
40 41 3.745799 TCTTGACAGTCTCGAACTCTCT 58.254 45.455 1.31 0.00 35.45 3.10
41 42 4.895961 TCTTGACAGTCTCGAACTCTCTA 58.104 43.478 1.31 0.00 35.45 2.43
42 43 4.691685 TCTTGACAGTCTCGAACTCTCTAC 59.308 45.833 1.31 0.00 35.45 2.59
43 44 2.994578 TGACAGTCTCGAACTCTCTACG 59.005 50.000 1.31 0.00 35.45 3.51
44 45 2.995258 GACAGTCTCGAACTCTCTACGT 59.005 50.000 0.00 0.00 35.45 3.57
45 46 2.737783 ACAGTCTCGAACTCTCTACGTG 59.262 50.000 0.00 0.00 35.45 4.49
46 47 1.733360 AGTCTCGAACTCTCTACGTGC 59.267 52.381 0.00 0.00 30.02 5.34
47 48 1.733360 GTCTCGAACTCTCTACGTGCT 59.267 52.381 0.00 0.00 0.00 4.40
48 49 2.160022 GTCTCGAACTCTCTACGTGCTT 59.840 50.000 0.00 0.00 0.00 3.91
49 50 2.159824 TCTCGAACTCTCTACGTGCTTG 59.840 50.000 0.00 0.00 0.00 4.01
50 51 2.148768 TCGAACTCTCTACGTGCTTGA 58.851 47.619 0.00 0.00 0.00 3.02
51 52 2.159824 TCGAACTCTCTACGTGCTTGAG 59.840 50.000 0.00 3.26 0.00 3.02
52 53 2.095668 CGAACTCTCTACGTGCTTGAGT 60.096 50.000 0.00 3.93 39.35 3.41
53 54 3.494232 GAACTCTCTACGTGCTTGAGTC 58.506 50.000 13.00 0.00 37.05 3.36
54 55 2.785562 ACTCTCTACGTGCTTGAGTCT 58.214 47.619 0.00 0.00 33.31 3.24
55 56 3.150767 ACTCTCTACGTGCTTGAGTCTT 58.849 45.455 0.00 0.00 33.31 3.01
56 57 3.057876 ACTCTCTACGTGCTTGAGTCTTG 60.058 47.826 0.00 0.00 33.31 3.02
57 58 3.146847 TCTCTACGTGCTTGAGTCTTGA 58.853 45.455 0.00 0.00 0.00 3.02
58 59 3.568430 TCTCTACGTGCTTGAGTCTTGAA 59.432 43.478 0.00 0.00 0.00 2.69
59 60 3.902150 TCTACGTGCTTGAGTCTTGAAG 58.098 45.455 0.00 0.00 0.00 3.02
60 61 1.871080 ACGTGCTTGAGTCTTGAAGG 58.129 50.000 0.00 0.00 0.00 3.46
61 62 0.514691 CGTGCTTGAGTCTTGAAGGC 59.485 55.000 0.00 0.00 0.00 4.35
62 63 1.875576 CGTGCTTGAGTCTTGAAGGCT 60.876 52.381 0.00 0.00 29.26 4.58
63 64 1.803555 GTGCTTGAGTCTTGAAGGCTC 59.196 52.381 19.31 19.31 46.75 4.70
68 69 2.880963 GAGTCTTGAAGGCTCGCTAT 57.119 50.000 11.41 0.00 37.20 2.97
69 70 3.172229 GAGTCTTGAAGGCTCGCTATT 57.828 47.619 11.41 0.00 37.20 1.73
70 71 3.526534 GAGTCTTGAAGGCTCGCTATTT 58.473 45.455 11.41 0.00 37.20 1.40
71 72 3.935828 GAGTCTTGAAGGCTCGCTATTTT 59.064 43.478 11.41 0.00 37.20 1.82
72 73 4.327680 AGTCTTGAAGGCTCGCTATTTTT 58.672 39.130 0.00 0.00 0.00 1.94
73 74 4.393371 AGTCTTGAAGGCTCGCTATTTTTC 59.607 41.667 0.00 0.00 0.00 2.29
74 75 3.370978 TCTTGAAGGCTCGCTATTTTTCG 59.629 43.478 0.00 0.00 0.00 3.46
75 76 2.006888 TGAAGGCTCGCTATTTTTCGG 58.993 47.619 0.00 0.00 0.00 4.30
76 77 2.277084 GAAGGCTCGCTATTTTTCGGA 58.723 47.619 0.00 0.00 0.00 4.55
77 78 1.653151 AGGCTCGCTATTTTTCGGAC 58.347 50.000 0.00 0.00 0.00 4.79
78 79 1.066430 AGGCTCGCTATTTTTCGGACA 60.066 47.619 0.00 0.00 0.00 4.02
79 80 1.062148 GGCTCGCTATTTTTCGGACAC 59.938 52.381 0.00 0.00 0.00 3.67
80 81 1.266891 GCTCGCTATTTTTCGGACACG 60.267 52.381 0.00 0.00 42.74 4.49
81 82 1.323534 CTCGCTATTTTTCGGACACGG 59.676 52.381 0.00 0.00 41.39 4.94
82 83 1.067706 TCGCTATTTTTCGGACACGGA 60.068 47.619 0.00 0.00 41.39 4.69
83 84 1.931172 CGCTATTTTTCGGACACGGAT 59.069 47.619 0.00 0.00 41.39 4.18
84 85 3.117794 CGCTATTTTTCGGACACGGATA 58.882 45.455 0.00 0.00 41.39 2.59
85 86 3.739300 CGCTATTTTTCGGACACGGATAT 59.261 43.478 0.00 0.00 41.39 1.63
86 87 4.210537 CGCTATTTTTCGGACACGGATATT 59.789 41.667 0.00 0.00 41.39 1.28
87 88 5.403166 CGCTATTTTTCGGACACGGATATTA 59.597 40.000 0.00 0.00 41.39 0.98
88 89 6.090358 CGCTATTTTTCGGACACGGATATTAT 59.910 38.462 0.00 0.00 41.39 1.28
89 90 7.234384 GCTATTTTTCGGACACGGATATTATG 58.766 38.462 0.00 0.00 41.39 1.90
90 91 5.994887 TTTTTCGGACACGGATATTATGG 57.005 39.130 0.00 0.00 41.39 2.74
91 92 4.675976 TTTCGGACACGGATATTATGGT 57.324 40.909 0.00 0.00 41.39 3.55
92 93 4.675976 TTCGGACACGGATATTATGGTT 57.324 40.909 0.00 0.00 41.39 3.67
93 94 3.985008 TCGGACACGGATATTATGGTTG 58.015 45.455 0.00 0.00 41.39 3.77
94 95 2.478894 CGGACACGGATATTATGGTTGC 59.521 50.000 0.00 0.00 36.18 4.17
95 96 2.478894 GGACACGGATATTATGGTTGCG 59.521 50.000 0.00 0.00 0.00 4.85
96 97 2.478894 GACACGGATATTATGGTTGCGG 59.521 50.000 0.00 0.00 0.00 5.69
97 98 1.196808 CACGGATATTATGGTTGCGGC 59.803 52.381 0.00 0.00 0.00 6.53
98 99 0.442310 CGGATATTATGGTTGCGGCG 59.558 55.000 0.51 0.51 0.00 6.46
99 100 1.519408 GGATATTATGGTTGCGGCGT 58.481 50.000 9.37 0.00 0.00 5.68
100 101 1.196808 GGATATTATGGTTGCGGCGTG 59.803 52.381 9.37 0.00 0.00 5.34
101 102 1.871039 GATATTATGGTTGCGGCGTGT 59.129 47.619 9.37 0.00 0.00 4.49
102 103 1.292061 TATTATGGTTGCGGCGTGTC 58.708 50.000 9.37 0.00 0.00 3.67
103 104 1.373590 ATTATGGTTGCGGCGTGTCC 61.374 55.000 9.37 9.02 0.00 4.02
104 105 2.457743 TTATGGTTGCGGCGTGTCCT 62.458 55.000 9.37 1.98 0.00 3.85
105 106 2.457743 TATGGTTGCGGCGTGTCCTT 62.458 55.000 9.37 9.03 0.00 3.36
106 107 4.025401 GGTTGCGGCGTGTCCTTG 62.025 66.667 9.37 0.00 0.00 3.61
107 108 2.970324 GTTGCGGCGTGTCCTTGA 60.970 61.111 9.37 0.00 0.00 3.02
108 109 2.664851 TTGCGGCGTGTCCTTGAG 60.665 61.111 9.37 0.00 0.00 3.02
109 110 4.680237 TGCGGCGTGTCCTTGAGG 62.680 66.667 9.37 0.00 0.00 3.86
110 111 4.681978 GCGGCGTGTCCTTGAGGT 62.682 66.667 9.37 0.00 36.34 3.85
111 112 2.030562 CGGCGTGTCCTTGAGGTT 59.969 61.111 0.00 0.00 36.34 3.50
112 113 2.317609 CGGCGTGTCCTTGAGGTTG 61.318 63.158 0.00 0.00 36.34 3.77
113 114 2.617274 GGCGTGTCCTTGAGGTTGC 61.617 63.158 0.00 0.00 36.34 4.17
114 115 1.598130 GCGTGTCCTTGAGGTTGCT 60.598 57.895 0.00 0.00 36.34 3.91
115 116 1.569479 GCGTGTCCTTGAGGTTGCTC 61.569 60.000 0.00 0.00 36.34 4.26
116 117 0.034059 CGTGTCCTTGAGGTTGCTCT 59.966 55.000 0.00 0.00 36.34 4.09
117 118 1.541233 CGTGTCCTTGAGGTTGCTCTT 60.541 52.381 0.00 0.00 36.34 2.85
118 119 2.288825 CGTGTCCTTGAGGTTGCTCTTA 60.289 50.000 0.00 0.00 36.34 2.10
119 120 3.617531 CGTGTCCTTGAGGTTGCTCTTAT 60.618 47.826 0.00 0.00 36.34 1.73
120 121 4.381612 CGTGTCCTTGAGGTTGCTCTTATA 60.382 45.833 0.00 0.00 36.34 0.98
121 122 5.675538 GTGTCCTTGAGGTTGCTCTTATAT 58.324 41.667 0.00 0.00 36.34 0.86
122 123 5.525378 GTGTCCTTGAGGTTGCTCTTATATG 59.475 44.000 0.00 0.00 36.34 1.78
123 124 5.189736 TGTCCTTGAGGTTGCTCTTATATGT 59.810 40.000 0.00 0.00 36.34 2.29
124 125 5.525378 GTCCTTGAGGTTGCTCTTATATGTG 59.475 44.000 0.00 0.00 36.34 3.21
125 126 4.818546 CCTTGAGGTTGCTCTTATATGTGG 59.181 45.833 0.00 0.00 0.00 4.17
126 127 5.396772 CCTTGAGGTTGCTCTTATATGTGGA 60.397 44.000 0.00 0.00 0.00 4.02
127 128 5.282055 TGAGGTTGCTCTTATATGTGGAG 57.718 43.478 0.00 0.00 0.00 3.86
128 129 4.962362 TGAGGTTGCTCTTATATGTGGAGA 59.038 41.667 0.00 0.00 0.00 3.71
129 130 5.425217 TGAGGTTGCTCTTATATGTGGAGAA 59.575 40.000 0.00 0.00 0.00 2.87
130 131 5.923204 AGGTTGCTCTTATATGTGGAGAAG 58.077 41.667 0.00 0.00 0.00 2.85
131 132 5.426833 AGGTTGCTCTTATATGTGGAGAAGT 59.573 40.000 0.00 0.00 0.00 3.01
132 133 6.069963 AGGTTGCTCTTATATGTGGAGAAGTT 60.070 38.462 0.00 0.00 0.00 2.66
133 134 6.599638 GGTTGCTCTTATATGTGGAGAAGTTT 59.400 38.462 0.00 0.00 0.00 2.66
134 135 7.414540 GGTTGCTCTTATATGTGGAGAAGTTTG 60.415 40.741 0.00 0.00 0.00 2.93
135 136 6.946340 TGCTCTTATATGTGGAGAAGTTTGA 58.054 36.000 0.00 0.00 0.00 2.69
136 137 7.568349 TGCTCTTATATGTGGAGAAGTTTGAT 58.432 34.615 0.00 0.00 0.00 2.57
137 138 8.704668 TGCTCTTATATGTGGAGAAGTTTGATA 58.295 33.333 0.00 0.00 0.00 2.15
138 139 9.717942 GCTCTTATATGTGGAGAAGTTTGATAT 57.282 33.333 0.00 0.00 0.00 1.63
144 145 9.995003 ATATGTGGAGAAGTTTGATATTCTCTC 57.005 33.333 13.03 8.46 46.92 3.20
145 146 6.644347 TGTGGAGAAGTTTGATATTCTCTCC 58.356 40.000 13.03 8.65 46.92 3.71
146 147 6.213397 TGTGGAGAAGTTTGATATTCTCTCCA 59.787 38.462 13.30 13.30 46.92 3.86
147 148 7.443302 TGGAGAAGTTTGATATTCTCTCCAT 57.557 36.000 13.30 0.00 46.92 3.41
148 149 7.865820 TGGAGAAGTTTGATATTCTCTCCATT 58.134 34.615 13.30 0.00 46.92 3.16
149 150 7.989741 TGGAGAAGTTTGATATTCTCTCCATTC 59.010 37.037 13.30 0.00 46.92 2.67
150 151 7.443879 GGAGAAGTTTGATATTCTCTCCATTCC 59.556 40.741 13.03 0.00 46.92 3.01
151 152 8.100135 AGAAGTTTGATATTCTCTCCATTCCT 57.900 34.615 0.00 0.00 29.80 3.36
152 153 9.218525 AGAAGTTTGATATTCTCTCCATTCCTA 57.781 33.333 0.00 0.00 29.80 2.94
153 154 9.838339 GAAGTTTGATATTCTCTCCATTCCTAA 57.162 33.333 0.00 0.00 0.00 2.69
187 188 6.877611 TTTTAGAGATTTCACCAAGTGACC 57.122 37.500 0.00 0.00 42.60 4.02
188 189 5.560722 TTAGAGATTTCACCAAGTGACCA 57.439 39.130 0.00 0.00 42.60 4.02
189 190 4.647564 AGAGATTTCACCAAGTGACCAT 57.352 40.909 0.00 0.00 42.60 3.55
190 191 5.762179 AGAGATTTCACCAAGTGACCATA 57.238 39.130 0.00 0.00 42.60 2.74
191 192 6.319048 AGAGATTTCACCAAGTGACCATAT 57.681 37.500 0.00 0.00 42.60 1.78
192 193 7.437713 AGAGATTTCACCAAGTGACCATATA 57.562 36.000 0.00 0.00 42.60 0.86
193 194 7.275920 AGAGATTTCACCAAGTGACCATATAC 58.724 38.462 0.00 0.00 42.60 1.47
194 195 6.957631 AGATTTCACCAAGTGACCATATACA 58.042 36.000 0.00 0.00 42.60 2.29
195 196 7.577303 AGATTTCACCAAGTGACCATATACAT 58.423 34.615 0.00 0.00 42.60 2.29
196 197 8.713971 AGATTTCACCAAGTGACCATATACATA 58.286 33.333 0.00 0.00 42.60 2.29
197 198 8.908786 ATTTCACCAAGTGACCATATACATAG 57.091 34.615 0.00 0.00 42.60 2.23
198 199 5.853936 TCACCAAGTGACCATATACATAGC 58.146 41.667 0.00 0.00 37.67 2.97
199 200 5.365314 TCACCAAGTGACCATATACATAGCA 59.635 40.000 0.00 0.00 37.67 3.49
200 201 6.054941 CACCAAGTGACCATATACATAGCAA 58.945 40.000 0.00 0.00 35.23 3.91
201 202 6.542005 CACCAAGTGACCATATACATAGCAAA 59.458 38.462 0.00 0.00 35.23 3.68
202 203 7.066887 CACCAAGTGACCATATACATAGCAAAA 59.933 37.037 0.00 0.00 35.23 2.44
203 204 7.779798 ACCAAGTGACCATATACATAGCAAAAT 59.220 33.333 0.00 0.00 0.00 1.82
204 205 8.077991 CCAAGTGACCATATACATAGCAAAATG 58.922 37.037 0.00 0.00 0.00 2.32
205 206 8.839343 CAAGTGACCATATACATAGCAAAATGA 58.161 33.333 1.26 0.00 0.00 2.57
206 207 8.613060 AGTGACCATATACATAGCAAAATGAG 57.387 34.615 1.26 0.00 0.00 2.90
207 208 8.213679 AGTGACCATATACATAGCAAAATGAGT 58.786 33.333 1.26 0.00 0.00 3.41
208 209 8.285394 GTGACCATATACATAGCAAAATGAGTG 58.715 37.037 1.26 0.00 0.00 3.51
209 210 8.210265 TGACCATATACATAGCAAAATGAGTGA 58.790 33.333 1.26 0.00 0.00 3.41
210 211 8.978874 ACCATATACATAGCAAAATGAGTGAA 57.021 30.769 1.26 0.00 0.00 3.18
211 212 9.578576 ACCATATACATAGCAAAATGAGTGAAT 57.421 29.630 1.26 0.00 0.00 2.57
256 257 5.705902 CATACATCCGTATGTCGTATTCCA 58.294 41.667 0.00 0.00 46.70 3.53
257 258 4.866508 ACATCCGTATGTCGTATTCCAT 57.133 40.909 0.00 0.00 42.92 3.41
258 259 5.209818 ACATCCGTATGTCGTATTCCATT 57.790 39.130 0.00 0.00 42.92 3.16
259 260 5.607477 ACATCCGTATGTCGTATTCCATTT 58.393 37.500 0.00 0.00 42.92 2.32
260 261 5.465390 ACATCCGTATGTCGTATTCCATTTG 59.535 40.000 0.00 0.00 42.92 2.32
261 262 5.265350 TCCGTATGTCGTATTCCATTTGA 57.735 39.130 0.00 0.00 37.94 2.69
262 263 5.662456 TCCGTATGTCGTATTCCATTTGAA 58.338 37.500 0.00 0.00 37.94 2.69
263 264 5.751509 TCCGTATGTCGTATTCCATTTGAAG 59.248 40.000 0.00 0.00 35.50 3.02
264 265 5.522460 CCGTATGTCGTATTCCATTTGAAGT 59.478 40.000 0.00 0.00 35.50 3.01
265 266 6.410845 CGTATGTCGTATTCCATTTGAAGTG 58.589 40.000 0.00 0.00 33.77 3.16
266 267 6.035650 CGTATGTCGTATTCCATTTGAAGTGT 59.964 38.462 0.00 0.00 33.77 3.55
267 268 5.856126 TGTCGTATTCCATTTGAAGTGTC 57.144 39.130 0.00 0.00 36.14 3.67
268 269 5.547465 TGTCGTATTCCATTTGAAGTGTCT 58.453 37.500 0.00 0.00 36.14 3.41
269 270 6.693466 TGTCGTATTCCATTTGAAGTGTCTA 58.307 36.000 0.00 0.00 36.14 2.59
270 271 7.156000 TGTCGTATTCCATTTGAAGTGTCTAA 58.844 34.615 0.00 0.00 36.14 2.10
271 272 7.658167 TGTCGTATTCCATTTGAAGTGTCTAAA 59.342 33.333 0.00 0.00 36.14 1.85
272 273 8.500773 GTCGTATTCCATTTGAAGTGTCTAAAA 58.499 33.333 0.00 0.00 36.14 1.52
273 274 9.058174 TCGTATTCCATTTGAAGTGTCTAAAAA 57.942 29.630 0.00 0.00 36.14 1.94
274 275 9.329913 CGTATTCCATTTGAAGTGTCTAAAAAG 57.670 33.333 0.00 0.00 36.14 2.27
277 278 8.519799 TTCCATTTGAAGTGTCTAAAAAGACT 57.480 30.769 7.04 0.00 39.41 3.24
278 279 8.519799 TCCATTTGAAGTGTCTAAAAAGACTT 57.480 30.769 7.04 0.00 39.41 3.01
279 280 9.621629 TCCATTTGAAGTGTCTAAAAAGACTTA 57.378 29.630 7.04 0.00 39.41 2.24
280 281 9.665264 CCATTTGAAGTGTCTAAAAAGACTTAC 57.335 33.333 7.04 0.00 39.41 2.34
295 296 7.668525 AAAGACTTACATTTAAGAACGGAGG 57.331 36.000 5.64 0.00 37.49 4.30
296 297 5.731591 AGACTTACATTTAAGAACGGAGGG 58.268 41.667 5.64 0.00 37.49 4.30
297 298 5.482878 AGACTTACATTTAAGAACGGAGGGA 59.517 40.000 5.64 0.00 37.49 4.20
298 299 5.731591 ACTTACATTTAAGAACGGAGGGAG 58.268 41.667 5.64 0.00 37.49 4.30
299 300 5.247792 ACTTACATTTAAGAACGGAGGGAGT 59.752 40.000 5.64 0.00 37.49 3.85
300 301 6.438425 ACTTACATTTAAGAACGGAGGGAGTA 59.562 38.462 5.64 0.00 37.49 2.59
301 302 5.082251 ACATTTAAGAACGGAGGGAGTAC 57.918 43.478 0.00 0.00 0.00 2.73
302 303 4.529377 ACATTTAAGAACGGAGGGAGTACA 59.471 41.667 0.00 0.00 0.00 2.90
303 304 5.189145 ACATTTAAGAACGGAGGGAGTACAT 59.811 40.000 0.00 0.00 0.00 2.29
304 305 4.730949 TTAAGAACGGAGGGAGTACATG 57.269 45.455 0.00 0.00 0.00 3.21
305 306 1.486211 AGAACGGAGGGAGTACATGG 58.514 55.000 0.00 0.00 0.00 3.66
306 307 1.192428 GAACGGAGGGAGTACATGGT 58.808 55.000 0.00 0.00 0.00 3.55
307 308 2.024655 AGAACGGAGGGAGTACATGGTA 60.025 50.000 0.00 0.00 0.00 3.25
308 309 2.068834 ACGGAGGGAGTACATGGTAG 57.931 55.000 0.00 0.00 0.00 3.18
309 310 1.567649 ACGGAGGGAGTACATGGTAGA 59.432 52.381 0.00 0.00 0.00 2.59
310 311 2.024655 ACGGAGGGAGTACATGGTAGAA 60.025 50.000 0.00 0.00 0.00 2.10
311 312 3.028850 CGGAGGGAGTACATGGTAGAAA 58.971 50.000 0.00 0.00 0.00 2.52
312 313 3.641906 CGGAGGGAGTACATGGTAGAAAT 59.358 47.826 0.00 0.00 0.00 2.17
313 314 4.262079 CGGAGGGAGTACATGGTAGAAATC 60.262 50.000 0.00 0.00 0.00 2.17
314 315 4.902448 GGAGGGAGTACATGGTAGAAATCT 59.098 45.833 0.00 0.00 0.00 2.40
315 316 5.221541 GGAGGGAGTACATGGTAGAAATCTG 60.222 48.000 0.00 0.00 0.00 2.90
316 317 4.101741 AGGGAGTACATGGTAGAAATCTGC 59.898 45.833 0.00 0.00 0.00 4.26
317 318 4.101741 GGGAGTACATGGTAGAAATCTGCT 59.898 45.833 0.00 0.00 0.00 4.24
318 319 5.304614 GGGAGTACATGGTAGAAATCTGCTA 59.695 44.000 0.00 0.00 0.00 3.49
319 320 6.183360 GGGAGTACATGGTAGAAATCTGCTAA 60.183 42.308 0.00 0.00 0.00 3.09
320 321 7.445945 GGAGTACATGGTAGAAATCTGCTAAT 58.554 38.462 0.00 0.00 0.00 1.73
321 322 7.386299 GGAGTACATGGTAGAAATCTGCTAATG 59.614 40.741 0.00 10.65 33.02 1.90
322 323 6.708054 AGTACATGGTAGAAATCTGCTAATGC 59.292 38.462 0.00 0.00 40.20 3.56
337 338 6.381481 TGCTAATGCATGGACTAATTTGAG 57.619 37.500 0.00 0.00 45.31 3.02
338 339 5.300034 TGCTAATGCATGGACTAATTTGAGG 59.700 40.000 0.00 0.00 45.31 3.86
339 340 5.532406 GCTAATGCATGGACTAATTTGAGGA 59.468 40.000 0.00 0.00 39.41 3.71
340 341 6.039717 GCTAATGCATGGACTAATTTGAGGAA 59.960 38.462 0.00 0.00 39.41 3.36
341 342 7.255730 GCTAATGCATGGACTAATTTGAGGAAT 60.256 37.037 0.00 0.00 39.41 3.01
342 343 9.288576 CTAATGCATGGACTAATTTGAGGAATA 57.711 33.333 0.00 0.00 0.00 1.75
343 344 7.756395 ATGCATGGACTAATTTGAGGAATAG 57.244 36.000 0.00 0.00 0.00 1.73
344 345 6.064060 TGCATGGACTAATTTGAGGAATAGG 58.936 40.000 0.00 0.00 0.00 2.57
345 346 5.474876 GCATGGACTAATTTGAGGAATAGGG 59.525 44.000 0.00 0.00 0.00 3.53
346 347 5.646692 TGGACTAATTTGAGGAATAGGGG 57.353 43.478 0.00 0.00 0.00 4.79
347 348 5.293643 TGGACTAATTTGAGGAATAGGGGA 58.706 41.667 0.00 0.00 0.00 4.81
348 349 5.917087 TGGACTAATTTGAGGAATAGGGGAT 59.083 40.000 0.00 0.00 0.00 3.85
349 350 6.183361 TGGACTAATTTGAGGAATAGGGGATG 60.183 42.308 0.00 0.00 0.00 3.51
350 351 6.206180 ACTAATTTGAGGAATAGGGGATGG 57.794 41.667 0.00 0.00 0.00 3.51
351 352 3.532641 ATTTGAGGAATAGGGGATGGC 57.467 47.619 0.00 0.00 0.00 4.40
352 353 2.212752 TTGAGGAATAGGGGATGGCT 57.787 50.000 0.00 0.00 0.00 4.75
353 354 1.734655 TGAGGAATAGGGGATGGCTC 58.265 55.000 0.00 0.00 0.00 4.70
354 355 1.224120 TGAGGAATAGGGGATGGCTCT 59.776 52.381 0.00 0.00 0.00 4.09
355 356 2.454772 TGAGGAATAGGGGATGGCTCTA 59.545 50.000 0.00 0.00 0.00 2.43
356 357 3.116356 TGAGGAATAGGGGATGGCTCTAA 60.116 47.826 0.00 0.00 0.00 2.10
357 358 3.910627 GAGGAATAGGGGATGGCTCTAAA 59.089 47.826 0.00 0.00 0.00 1.85
358 359 3.913163 AGGAATAGGGGATGGCTCTAAAG 59.087 47.826 0.00 0.00 0.00 1.85
359 360 3.653352 GGAATAGGGGATGGCTCTAAAGT 59.347 47.826 0.00 0.00 0.00 2.66
360 361 4.104897 GGAATAGGGGATGGCTCTAAAGTT 59.895 45.833 0.00 0.00 0.00 2.66
361 362 5.309806 GGAATAGGGGATGGCTCTAAAGTTA 59.690 44.000 0.00 0.00 0.00 2.24
362 363 6.183361 GGAATAGGGGATGGCTCTAAAGTTAA 60.183 42.308 0.00 0.00 0.00 2.01
363 364 7.408013 AATAGGGGATGGCTCTAAAGTTAAT 57.592 36.000 0.00 0.00 0.00 1.40
364 365 8.520119 AATAGGGGATGGCTCTAAAGTTAATA 57.480 34.615 0.00 0.00 0.00 0.98
365 366 6.189036 AGGGGATGGCTCTAAAGTTAATAC 57.811 41.667 0.00 0.00 0.00 1.89
366 367 5.073280 AGGGGATGGCTCTAAAGTTAATACC 59.927 44.000 0.00 0.00 0.00 2.73
367 368 5.073280 GGGGATGGCTCTAAAGTTAATACCT 59.927 44.000 0.00 0.00 0.00 3.08
368 369 6.271624 GGGGATGGCTCTAAAGTTAATACCTA 59.728 42.308 0.00 0.00 0.00 3.08
369 370 7.037514 GGGGATGGCTCTAAAGTTAATACCTAT 60.038 40.741 0.00 0.00 0.00 2.57
528 529 3.374988 TCAGATTTCATCATGCAACGACC 59.625 43.478 0.00 0.00 0.00 4.79
549 550 9.449719 ACGACCAATATAAATTCTCTTCACTTT 57.550 29.630 0.00 0.00 0.00 2.66
725 848 9.303537 ACTAAAATAGTGAATCTAAACGCTCTC 57.696 33.333 0.00 0.00 37.69 3.20
762 885 2.367567 GGGAGTACCAGTCAACTTCACA 59.632 50.000 0.00 0.00 39.85 3.58
1065 1198 1.039068 CAAACACAATGGCCTGGTCA 58.961 50.000 2.19 2.19 0.00 4.02
1275 1408 1.671742 GCTCTCCCTCGGAAACACA 59.328 57.895 0.00 0.00 0.00 3.72
1289 1422 4.298332 GGAAACACAATGATGGACACAAC 58.702 43.478 0.00 0.00 0.00 3.32
1297 1430 1.142060 TGATGGACACAACCGACCTTT 59.858 47.619 0.00 0.00 0.00 3.11
1352 1487 3.458163 CTTCCCGTCTAGCCCGCA 61.458 66.667 0.00 0.00 0.00 5.69
1522 2901 8.978564 ATAGATACGAAGCAACTCATAGATTG 57.021 34.615 0.00 0.00 0.00 2.67
1587 2966 7.412853 AACCCCATATTAAACAATGTGGTAC 57.587 36.000 10.90 0.00 39.09 3.34
1684 3063 7.396623 TCCAAACCAAAGTTTAACTCCTAACAA 59.603 33.333 0.00 0.00 44.47 2.83
1704 3083 6.966534 ACAAGAAATGTCTCCAAATCAAGT 57.033 33.333 0.00 0.00 37.96 3.16
1709 3088 6.716628 AGAAATGTCTCCAAATCAAGTTAGCA 59.283 34.615 0.00 0.00 0.00 3.49
2341 3732 7.940850 TCAATTCTTTTGGAAAAGGTAGACAG 58.059 34.615 11.10 0.00 44.22 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.804989 GATCCGCCACACTTCTTTGG 59.195 55.000 0.00 0.00 35.81 3.28
2 3 1.813513 AGATCCGCCACACTTCTTTG 58.186 50.000 0.00 0.00 0.00 2.77
3 4 2.154462 CAAGATCCGCCACACTTCTTT 58.846 47.619 0.00 0.00 0.00 2.52
4 5 1.347707 TCAAGATCCGCCACACTTCTT 59.652 47.619 0.00 0.00 0.00 2.52
6 7 1.079503 GTCAAGATCCGCCACACTTC 58.920 55.000 0.00 0.00 0.00 3.01
7 8 0.396435 TGTCAAGATCCGCCACACTT 59.604 50.000 0.00 0.00 0.00 3.16
8 9 0.036952 CTGTCAAGATCCGCCACACT 60.037 55.000 0.00 0.00 0.00 3.55
9 10 0.320771 ACTGTCAAGATCCGCCACAC 60.321 55.000 0.00 0.00 0.00 3.82
10 11 0.037326 GACTGTCAAGATCCGCCACA 60.037 55.000 2.24 0.00 0.00 4.17
11 12 0.247736 AGACTGTCAAGATCCGCCAC 59.752 55.000 10.88 0.00 0.00 5.01
12 13 0.532573 GAGACTGTCAAGATCCGCCA 59.467 55.000 10.88 0.00 0.00 5.69
13 14 0.526524 CGAGACTGTCAAGATCCGCC 60.527 60.000 10.88 0.00 0.00 6.13
14 15 0.452184 TCGAGACTGTCAAGATCCGC 59.548 55.000 10.88 0.00 0.00 5.54
15 16 2.162608 AGTTCGAGACTGTCAAGATCCG 59.837 50.000 10.88 3.94 37.17 4.18
16 17 3.442273 AGAGTTCGAGACTGTCAAGATCC 59.558 47.826 10.88 3.34 39.19 3.36
17 18 4.658071 GAGAGTTCGAGACTGTCAAGATC 58.342 47.826 10.88 7.79 45.47 2.75
18 19 4.695217 GAGAGTTCGAGACTGTCAAGAT 57.305 45.455 10.88 0.00 45.47 2.40
23 24 2.995258 ACGTAGAGAGTTCGAGACTGTC 59.005 50.000 13.37 13.37 46.27 3.51
24 25 2.737783 CACGTAGAGAGTTCGAGACTGT 59.262 50.000 5.20 1.85 39.19 3.55
25 26 2.474856 GCACGTAGAGAGTTCGAGACTG 60.475 54.545 5.20 0.00 39.19 3.51
26 27 1.733360 GCACGTAGAGAGTTCGAGACT 59.267 52.381 0.00 0.71 42.70 3.24
27 28 1.733360 AGCACGTAGAGAGTTCGAGAC 59.267 52.381 0.00 0.00 0.00 3.36
28 29 2.096220 AGCACGTAGAGAGTTCGAGA 57.904 50.000 0.00 0.00 0.00 4.04
29 30 2.159824 TCAAGCACGTAGAGAGTTCGAG 59.840 50.000 0.00 0.00 0.00 4.04
30 31 2.148768 TCAAGCACGTAGAGAGTTCGA 58.851 47.619 0.00 0.00 0.00 3.71
31 32 2.095668 ACTCAAGCACGTAGAGAGTTCG 60.096 50.000 11.80 0.00 36.21 3.95
32 33 3.189702 AGACTCAAGCACGTAGAGAGTTC 59.810 47.826 11.70 7.03 39.47 3.01
33 34 3.150767 AGACTCAAGCACGTAGAGAGTT 58.849 45.455 11.70 2.83 39.47 3.01
34 35 2.785562 AGACTCAAGCACGTAGAGAGT 58.214 47.619 10.63 10.63 41.84 3.24
35 36 3.189495 TCAAGACTCAAGCACGTAGAGAG 59.811 47.826 11.80 8.60 33.69 3.20
36 37 3.146847 TCAAGACTCAAGCACGTAGAGA 58.853 45.455 11.80 0.00 33.69 3.10
37 38 3.560902 TCAAGACTCAAGCACGTAGAG 57.439 47.619 0.00 0.00 35.56 2.43
38 39 3.305403 CCTTCAAGACTCAAGCACGTAGA 60.305 47.826 0.00 0.00 0.00 2.59
39 40 2.989840 CCTTCAAGACTCAAGCACGTAG 59.010 50.000 0.00 0.00 0.00 3.51
40 41 2.866460 GCCTTCAAGACTCAAGCACGTA 60.866 50.000 0.00 0.00 0.00 3.57
41 42 1.871080 CCTTCAAGACTCAAGCACGT 58.129 50.000 0.00 0.00 0.00 4.49
42 43 0.514691 GCCTTCAAGACTCAAGCACG 59.485 55.000 0.00 0.00 0.00 5.34
43 44 1.803555 GAGCCTTCAAGACTCAAGCAC 59.196 52.381 0.00 0.00 0.00 4.40
44 45 1.606480 CGAGCCTTCAAGACTCAAGCA 60.606 52.381 1.29 0.00 0.00 3.91
45 46 1.074752 CGAGCCTTCAAGACTCAAGC 58.925 55.000 1.29 0.00 0.00 4.01
46 47 1.074752 GCGAGCCTTCAAGACTCAAG 58.925 55.000 1.29 0.00 0.00 3.02
47 48 0.681733 AGCGAGCCTTCAAGACTCAA 59.318 50.000 1.29 0.00 0.00 3.02
48 49 1.545841 TAGCGAGCCTTCAAGACTCA 58.454 50.000 1.29 0.00 0.00 3.41
49 50 2.880963 ATAGCGAGCCTTCAAGACTC 57.119 50.000 0.00 0.00 0.00 3.36
50 51 3.618690 AAATAGCGAGCCTTCAAGACT 57.381 42.857 0.00 0.00 0.00 3.24
51 52 4.653004 GAAAAATAGCGAGCCTTCAAGAC 58.347 43.478 0.00 0.00 0.00 3.01
52 53 3.370978 CGAAAAATAGCGAGCCTTCAAGA 59.629 43.478 0.00 0.00 0.00 3.02
53 54 3.485877 CCGAAAAATAGCGAGCCTTCAAG 60.486 47.826 0.00 0.00 0.00 3.02
54 55 2.418628 CCGAAAAATAGCGAGCCTTCAA 59.581 45.455 0.00 0.00 0.00 2.69
55 56 2.006888 CCGAAAAATAGCGAGCCTTCA 58.993 47.619 0.00 0.00 0.00 3.02
56 57 2.030579 GTCCGAAAAATAGCGAGCCTTC 59.969 50.000 0.00 0.00 0.00 3.46
57 58 2.007608 GTCCGAAAAATAGCGAGCCTT 58.992 47.619 0.00 0.00 0.00 4.35
58 59 1.066430 TGTCCGAAAAATAGCGAGCCT 60.066 47.619 0.00 0.00 0.00 4.58
59 60 1.062148 GTGTCCGAAAAATAGCGAGCC 59.938 52.381 0.00 0.00 0.00 4.70
60 61 1.266891 CGTGTCCGAAAAATAGCGAGC 60.267 52.381 0.00 0.00 35.63 5.03
61 62 1.323534 CCGTGTCCGAAAAATAGCGAG 59.676 52.381 0.00 0.00 35.63 5.03
62 63 1.067706 TCCGTGTCCGAAAAATAGCGA 60.068 47.619 0.00 0.00 35.63 4.93
63 64 1.352114 TCCGTGTCCGAAAAATAGCG 58.648 50.000 0.00 0.00 35.63 4.26
64 65 5.668558 AATATCCGTGTCCGAAAAATAGC 57.331 39.130 0.00 0.00 35.63 2.97
65 66 7.386848 ACCATAATATCCGTGTCCGAAAAATAG 59.613 37.037 0.00 0.00 35.63 1.73
66 67 7.218614 ACCATAATATCCGTGTCCGAAAAATA 58.781 34.615 0.00 0.00 35.63 1.40
67 68 6.059484 ACCATAATATCCGTGTCCGAAAAAT 58.941 36.000 0.00 0.00 35.63 1.82
68 69 5.430007 ACCATAATATCCGTGTCCGAAAAA 58.570 37.500 0.00 0.00 35.63 1.94
69 70 5.026038 ACCATAATATCCGTGTCCGAAAA 57.974 39.130 0.00 0.00 35.63 2.29
70 71 4.675976 ACCATAATATCCGTGTCCGAAA 57.324 40.909 0.00 0.00 35.63 3.46
71 72 4.373527 CAACCATAATATCCGTGTCCGAA 58.626 43.478 0.00 0.00 35.63 4.30
72 73 3.800949 GCAACCATAATATCCGTGTCCGA 60.801 47.826 0.00 0.00 35.63 4.55
73 74 2.478894 GCAACCATAATATCCGTGTCCG 59.521 50.000 0.00 0.00 0.00 4.79
74 75 2.478894 CGCAACCATAATATCCGTGTCC 59.521 50.000 0.00 0.00 0.00 4.02
75 76 2.478894 CCGCAACCATAATATCCGTGTC 59.521 50.000 0.00 0.00 0.00 3.67
76 77 2.489971 CCGCAACCATAATATCCGTGT 58.510 47.619 0.00 0.00 0.00 4.49
77 78 1.196808 GCCGCAACCATAATATCCGTG 59.803 52.381 0.00 0.00 0.00 4.94
78 79 1.519408 GCCGCAACCATAATATCCGT 58.481 50.000 0.00 0.00 0.00 4.69
79 80 0.442310 CGCCGCAACCATAATATCCG 59.558 55.000 0.00 0.00 0.00 4.18
80 81 1.196808 CACGCCGCAACCATAATATCC 59.803 52.381 0.00 0.00 0.00 2.59
81 82 1.871039 ACACGCCGCAACCATAATATC 59.129 47.619 0.00 0.00 0.00 1.63
82 83 1.871039 GACACGCCGCAACCATAATAT 59.129 47.619 0.00 0.00 0.00 1.28
83 84 1.292061 GACACGCCGCAACCATAATA 58.708 50.000 0.00 0.00 0.00 0.98
84 85 1.373590 GGACACGCCGCAACCATAAT 61.374 55.000 0.00 0.00 0.00 1.28
85 86 2.036006 GGACACGCCGCAACCATAA 61.036 57.895 0.00 0.00 0.00 1.90
86 87 2.435234 GGACACGCCGCAACCATA 60.435 61.111 0.00 0.00 0.00 2.74
87 88 3.842925 AAGGACACGCCGCAACCAT 62.843 57.895 0.00 0.00 43.43 3.55
88 89 4.555709 AAGGACACGCCGCAACCA 62.556 61.111 0.00 0.00 43.43 3.67
89 90 4.025401 CAAGGACACGCCGCAACC 62.025 66.667 0.00 0.00 43.43 3.77
90 91 2.954753 CTCAAGGACACGCCGCAAC 61.955 63.158 0.00 0.00 43.43 4.17
91 92 2.664851 CTCAAGGACACGCCGCAA 60.665 61.111 0.00 0.00 43.43 4.85
92 93 4.680237 CCTCAAGGACACGCCGCA 62.680 66.667 0.00 0.00 43.43 5.69
93 94 4.681978 ACCTCAAGGACACGCCGC 62.682 66.667 2.30 0.00 43.43 6.53
94 95 2.030562 AACCTCAAGGACACGCCG 59.969 61.111 2.30 0.00 43.43 6.46
95 96 2.617274 GCAACCTCAAGGACACGCC 61.617 63.158 2.30 0.00 38.94 5.68
96 97 1.569479 GAGCAACCTCAAGGACACGC 61.569 60.000 2.30 0.00 38.03 5.34
97 98 0.034059 AGAGCAACCTCAAGGACACG 59.966 55.000 2.30 0.00 40.68 4.49
98 99 2.262423 AAGAGCAACCTCAAGGACAC 57.738 50.000 2.30 0.00 40.68 3.67
99 100 5.189736 ACATATAAGAGCAACCTCAAGGACA 59.810 40.000 2.30 0.00 40.68 4.02
100 101 5.525378 CACATATAAGAGCAACCTCAAGGAC 59.475 44.000 2.30 0.00 40.68 3.85
101 102 5.396772 CCACATATAAGAGCAACCTCAAGGA 60.397 44.000 2.30 0.00 40.68 3.36
102 103 4.818546 CCACATATAAGAGCAACCTCAAGG 59.181 45.833 0.00 0.00 40.68 3.61
103 104 5.674525 TCCACATATAAGAGCAACCTCAAG 58.325 41.667 0.00 0.00 40.68 3.02
104 105 5.425217 TCTCCACATATAAGAGCAACCTCAA 59.575 40.000 0.00 0.00 40.68 3.02
105 106 4.962362 TCTCCACATATAAGAGCAACCTCA 59.038 41.667 0.00 0.00 40.68 3.86
106 107 5.537300 TCTCCACATATAAGAGCAACCTC 57.463 43.478 0.00 0.00 38.42 3.85
107 108 5.426833 ACTTCTCCACATATAAGAGCAACCT 59.573 40.000 0.00 0.00 0.00 3.50
108 109 5.675538 ACTTCTCCACATATAAGAGCAACC 58.324 41.667 0.00 0.00 0.00 3.77
109 110 7.334421 TCAAACTTCTCCACATATAAGAGCAAC 59.666 37.037 0.00 0.00 0.00 4.17
110 111 7.394016 TCAAACTTCTCCACATATAAGAGCAA 58.606 34.615 0.00 0.00 0.00 3.91
111 112 6.946340 TCAAACTTCTCCACATATAAGAGCA 58.054 36.000 0.00 0.00 0.00 4.26
112 113 9.717942 ATATCAAACTTCTCCACATATAAGAGC 57.282 33.333 0.00 0.00 0.00 4.09
118 119 9.995003 GAGAGAATATCAAACTTCTCCACATAT 57.005 33.333 8.30 0.00 45.52 1.78
119 120 8.424918 GGAGAGAATATCAAACTTCTCCACATA 58.575 37.037 12.21 0.00 45.52 2.29
120 121 7.092712 TGGAGAGAATATCAAACTTCTCCACAT 60.093 37.037 15.05 0.00 45.52 3.21
121 122 6.213397 TGGAGAGAATATCAAACTTCTCCACA 59.787 38.462 15.05 7.15 45.52 4.17
122 123 6.644347 TGGAGAGAATATCAAACTTCTCCAC 58.356 40.000 15.05 5.08 45.52 4.02
123 124 6.874278 TGGAGAGAATATCAAACTTCTCCA 57.126 37.500 15.05 15.05 45.52 3.86
124 125 7.443879 GGAATGGAGAGAATATCAAACTTCTCC 59.556 40.741 10.59 10.59 45.52 3.71
125 126 8.210265 AGGAATGGAGAGAATATCAAACTTCTC 58.790 37.037 4.52 4.52 44.99 2.87
126 127 8.100135 AGGAATGGAGAGAATATCAAACTTCT 57.900 34.615 0.00 0.00 34.48 2.85
127 128 9.838339 TTAGGAATGGAGAGAATATCAAACTTC 57.162 33.333 0.00 0.00 0.00 3.01
163 164 6.831353 TGGTCACTTGGTGAAATCTCTAAAAA 59.169 34.615 1.77 0.00 44.49 1.94
164 165 6.361433 TGGTCACTTGGTGAAATCTCTAAAA 58.639 36.000 1.77 0.00 44.49 1.52
165 166 5.935945 TGGTCACTTGGTGAAATCTCTAAA 58.064 37.500 1.77 0.00 44.49 1.85
166 167 5.560722 TGGTCACTTGGTGAAATCTCTAA 57.439 39.130 1.77 0.00 44.49 2.10
167 168 5.762179 ATGGTCACTTGGTGAAATCTCTA 57.238 39.130 1.77 0.00 44.49 2.43
168 169 4.647564 ATGGTCACTTGGTGAAATCTCT 57.352 40.909 1.77 0.00 44.49 3.10
169 170 7.047891 TGTATATGGTCACTTGGTGAAATCTC 58.952 38.462 1.77 0.00 44.49 2.75
170 171 6.957631 TGTATATGGTCACTTGGTGAAATCT 58.042 36.000 1.77 0.00 44.49 2.40
171 172 7.807977 ATGTATATGGTCACTTGGTGAAATC 57.192 36.000 1.77 0.00 44.49 2.17
172 173 7.445402 GCTATGTATATGGTCACTTGGTGAAAT 59.555 37.037 1.77 2.93 44.49 2.17
173 174 6.765989 GCTATGTATATGGTCACTTGGTGAAA 59.234 38.462 1.77 0.00 44.49 2.69
174 175 6.126911 TGCTATGTATATGGTCACTTGGTGAA 60.127 38.462 1.77 0.00 44.49 3.18
175 176 5.365314 TGCTATGTATATGGTCACTTGGTGA 59.635 40.000 0.00 0.00 40.50 4.02
176 177 5.610398 TGCTATGTATATGGTCACTTGGTG 58.390 41.667 0.00 0.00 34.45 4.17
177 178 5.887214 TGCTATGTATATGGTCACTTGGT 57.113 39.130 0.00 0.00 0.00 3.67
178 179 7.566760 TTTTGCTATGTATATGGTCACTTGG 57.433 36.000 0.00 0.00 0.00 3.61
179 180 8.839343 TCATTTTGCTATGTATATGGTCACTTG 58.161 33.333 0.00 0.00 0.00 3.16
180 181 8.978874 TCATTTTGCTATGTATATGGTCACTT 57.021 30.769 0.00 0.00 0.00 3.16
181 182 8.213679 ACTCATTTTGCTATGTATATGGTCACT 58.786 33.333 0.00 0.00 0.00 3.41
182 183 8.285394 CACTCATTTTGCTATGTATATGGTCAC 58.715 37.037 0.00 0.00 0.00 3.67
183 184 8.210265 TCACTCATTTTGCTATGTATATGGTCA 58.790 33.333 0.00 0.00 0.00 4.02
184 185 8.607441 TCACTCATTTTGCTATGTATATGGTC 57.393 34.615 0.00 0.00 0.00 4.02
185 186 8.978874 TTCACTCATTTTGCTATGTATATGGT 57.021 30.769 0.00 0.00 0.00 3.55
192 193 9.618890 AGTGTATATTCACTCATTTTGCTATGT 57.381 29.630 9.03 0.00 44.07 2.29
234 235 5.970317 TGGAATACGACATACGGATGTAT 57.030 39.130 14.70 7.78 45.65 2.29
235 236 5.970317 ATGGAATACGACATACGGATGTA 57.030 39.130 14.70 0.00 45.65 2.29
236 237 4.866508 ATGGAATACGACATACGGATGT 57.133 40.909 14.62 14.62 45.65 3.06
237 238 5.694458 TCAAATGGAATACGACATACGGATG 59.306 40.000 5.94 5.94 45.65 3.51
239 240 5.751509 CTTCAAATGGAATACGACATACGGA 59.248 40.000 0.00 0.00 39.61 4.69
240 241 5.522460 ACTTCAAATGGAATACGACATACGG 59.478 40.000 0.00 0.00 39.61 4.02
241 242 6.035650 ACACTTCAAATGGAATACGACATACG 59.964 38.462 0.00 0.00 40.49 3.06
242 243 7.277981 AGACACTTCAAATGGAATACGACATAC 59.722 37.037 0.00 0.00 34.32 2.39
243 244 7.327975 AGACACTTCAAATGGAATACGACATA 58.672 34.615 0.00 0.00 34.32 2.29
244 245 6.173339 AGACACTTCAAATGGAATACGACAT 58.827 36.000 0.00 0.00 34.32 3.06
245 246 5.547465 AGACACTTCAAATGGAATACGACA 58.453 37.500 0.00 0.00 34.32 4.35
246 247 7.591006 TTAGACACTTCAAATGGAATACGAC 57.409 36.000 0.00 0.00 34.32 4.34
247 248 8.610248 TTTTAGACACTTCAAATGGAATACGA 57.390 30.769 0.00 0.00 34.32 3.43
248 249 9.329913 CTTTTTAGACACTTCAAATGGAATACG 57.670 33.333 0.00 0.00 34.32 3.06
251 252 9.136323 AGTCTTTTTAGACACTTCAAATGGAAT 57.864 29.630 7.92 0.00 41.02 3.01
252 253 8.519799 AGTCTTTTTAGACACTTCAAATGGAA 57.480 30.769 7.92 0.00 41.02 3.53
253 254 8.519799 AAGTCTTTTTAGACACTTCAAATGGA 57.480 30.769 7.92 0.00 41.02 3.41
254 255 9.665264 GTAAGTCTTTTTAGACACTTCAAATGG 57.335 33.333 7.92 0.00 41.02 3.16
269 270 8.565416 CCTCCGTTCTTAAATGTAAGTCTTTTT 58.435 33.333 2.53 0.00 38.33 1.94
270 271 7.174426 CCCTCCGTTCTTAAATGTAAGTCTTTT 59.826 37.037 2.53 0.00 38.33 2.27
271 272 6.653740 CCCTCCGTTCTTAAATGTAAGTCTTT 59.346 38.462 2.53 0.00 38.33 2.52
272 273 6.013984 TCCCTCCGTTCTTAAATGTAAGTCTT 60.014 38.462 2.53 0.00 38.33 3.01
273 274 5.482878 TCCCTCCGTTCTTAAATGTAAGTCT 59.517 40.000 2.53 0.00 38.33 3.24
274 275 5.727434 TCCCTCCGTTCTTAAATGTAAGTC 58.273 41.667 2.53 0.00 38.33 3.01
275 276 5.247792 ACTCCCTCCGTTCTTAAATGTAAGT 59.752 40.000 2.53 0.00 38.33 2.24
276 277 5.731591 ACTCCCTCCGTTCTTAAATGTAAG 58.268 41.667 0.00 0.00 38.50 2.34
277 278 5.750352 ACTCCCTCCGTTCTTAAATGTAA 57.250 39.130 0.00 0.00 0.00 2.41
278 279 5.716228 TGTACTCCCTCCGTTCTTAAATGTA 59.284 40.000 0.00 0.00 0.00 2.29
279 280 4.529377 TGTACTCCCTCCGTTCTTAAATGT 59.471 41.667 0.00 0.00 0.00 2.71
280 281 5.080969 TGTACTCCCTCCGTTCTTAAATG 57.919 43.478 0.00 0.00 0.00 2.32
281 282 5.396436 CCATGTACTCCCTCCGTTCTTAAAT 60.396 44.000 0.00 0.00 0.00 1.40
282 283 4.081309 CCATGTACTCCCTCCGTTCTTAAA 60.081 45.833 0.00 0.00 0.00 1.52
283 284 3.449737 CCATGTACTCCCTCCGTTCTTAA 59.550 47.826 0.00 0.00 0.00 1.85
284 285 3.028850 CCATGTACTCCCTCCGTTCTTA 58.971 50.000 0.00 0.00 0.00 2.10
285 286 1.831736 CCATGTACTCCCTCCGTTCTT 59.168 52.381 0.00 0.00 0.00 2.52
286 287 1.273098 ACCATGTACTCCCTCCGTTCT 60.273 52.381 0.00 0.00 0.00 3.01
287 288 1.192428 ACCATGTACTCCCTCCGTTC 58.808 55.000 0.00 0.00 0.00 3.95
288 289 2.024655 TCTACCATGTACTCCCTCCGTT 60.025 50.000 0.00 0.00 0.00 4.44
289 290 1.567649 TCTACCATGTACTCCCTCCGT 59.432 52.381 0.00 0.00 0.00 4.69
290 291 2.359981 TCTACCATGTACTCCCTCCG 57.640 55.000 0.00 0.00 0.00 4.63
291 292 4.902448 AGATTTCTACCATGTACTCCCTCC 59.098 45.833 0.00 0.00 0.00 4.30
292 293 5.740513 GCAGATTTCTACCATGTACTCCCTC 60.741 48.000 0.00 0.00 0.00 4.30
293 294 4.101741 GCAGATTTCTACCATGTACTCCCT 59.898 45.833 0.00 0.00 0.00 4.20
294 295 4.101741 AGCAGATTTCTACCATGTACTCCC 59.898 45.833 0.00 0.00 0.00 4.30
295 296 5.283457 AGCAGATTTCTACCATGTACTCC 57.717 43.478 0.00 0.00 0.00 3.85
296 297 7.095439 GCATTAGCAGATTTCTACCATGTACTC 60.095 40.741 0.00 0.00 41.58 2.59
297 298 6.708054 GCATTAGCAGATTTCTACCATGTACT 59.292 38.462 0.00 0.00 41.58 2.73
298 299 6.892691 GCATTAGCAGATTTCTACCATGTAC 58.107 40.000 0.00 0.00 41.58 2.90
315 316 5.532406 TCCTCAAATTAGTCCATGCATTAGC 59.468 40.000 0.00 0.00 42.57 3.09
316 317 7.572523 TTCCTCAAATTAGTCCATGCATTAG 57.427 36.000 0.00 0.00 0.00 1.73
317 318 9.288576 CTATTCCTCAAATTAGTCCATGCATTA 57.711 33.333 0.00 0.00 0.00 1.90
318 319 7.232127 CCTATTCCTCAAATTAGTCCATGCATT 59.768 37.037 0.00 0.00 0.00 3.56
319 320 6.718454 CCTATTCCTCAAATTAGTCCATGCAT 59.282 38.462 0.00 0.00 0.00 3.96
320 321 6.064060 CCTATTCCTCAAATTAGTCCATGCA 58.936 40.000 0.00 0.00 0.00 3.96
321 322 5.474876 CCCTATTCCTCAAATTAGTCCATGC 59.525 44.000 0.00 0.00 0.00 4.06
322 323 6.006449 CCCCTATTCCTCAAATTAGTCCATG 58.994 44.000 0.00 0.00 0.00 3.66
323 324 5.917087 TCCCCTATTCCTCAAATTAGTCCAT 59.083 40.000 0.00 0.00 0.00 3.41
324 325 5.293643 TCCCCTATTCCTCAAATTAGTCCA 58.706 41.667 0.00 0.00 0.00 4.02
325 326 5.906772 TCCCCTATTCCTCAAATTAGTCC 57.093 43.478 0.00 0.00 0.00 3.85
326 327 6.241645 CCATCCCCTATTCCTCAAATTAGTC 58.758 44.000 0.00 0.00 0.00 2.59
327 328 5.458215 GCCATCCCCTATTCCTCAAATTAGT 60.458 44.000 0.00 0.00 0.00 2.24
328 329 5.012893 GCCATCCCCTATTCCTCAAATTAG 58.987 45.833 0.00 0.00 0.00 1.73
329 330 4.669768 AGCCATCCCCTATTCCTCAAATTA 59.330 41.667 0.00 0.00 0.00 1.40
330 331 3.468625 AGCCATCCCCTATTCCTCAAATT 59.531 43.478 0.00 0.00 0.00 1.82
331 332 3.066704 AGCCATCCCCTATTCCTCAAAT 58.933 45.455 0.00 0.00 0.00 2.32
332 333 2.443255 GAGCCATCCCCTATTCCTCAAA 59.557 50.000 0.00 0.00 0.00 2.69
333 334 2.057922 GAGCCATCCCCTATTCCTCAA 58.942 52.381 0.00 0.00 0.00 3.02
334 335 1.224120 AGAGCCATCCCCTATTCCTCA 59.776 52.381 0.00 0.00 0.00 3.86
335 336 2.037385 AGAGCCATCCCCTATTCCTC 57.963 55.000 0.00 0.00 0.00 3.71
336 337 3.655972 TTAGAGCCATCCCCTATTCCT 57.344 47.619 0.00 0.00 0.00 3.36
337 338 3.653352 ACTTTAGAGCCATCCCCTATTCC 59.347 47.826 0.00 0.00 0.00 3.01
338 339 4.984146 ACTTTAGAGCCATCCCCTATTC 57.016 45.455 0.00 0.00 0.00 1.75
339 340 6.841781 TTAACTTTAGAGCCATCCCCTATT 57.158 37.500 0.00 0.00 0.00 1.73
340 341 7.037514 GGTATTAACTTTAGAGCCATCCCCTAT 60.038 40.741 0.00 0.00 0.00 2.57
341 342 6.271624 GGTATTAACTTTAGAGCCATCCCCTA 59.728 42.308 0.00 0.00 0.00 3.53
342 343 5.073280 GGTATTAACTTTAGAGCCATCCCCT 59.927 44.000 0.00 0.00 0.00 4.79
343 344 5.073280 AGGTATTAACTTTAGAGCCATCCCC 59.927 44.000 0.00 0.00 0.00 4.81
344 345 6.189036 AGGTATTAACTTTAGAGCCATCCC 57.811 41.667 0.00 0.00 0.00 3.85
345 346 8.594550 TGATAGGTATTAACTTTAGAGCCATCC 58.405 37.037 0.00 0.00 0.00 3.51
347 348 9.950496 CATGATAGGTATTAACTTTAGAGCCAT 57.050 33.333 0.00 0.00 0.00 4.40
348 349 9.154632 TCATGATAGGTATTAACTTTAGAGCCA 57.845 33.333 0.00 0.00 0.00 4.75
349 350 9.425577 GTCATGATAGGTATTAACTTTAGAGCC 57.574 37.037 0.00 0.00 0.00 4.70
360 361 9.463902 GCCTTCTACTAGTCATGATAGGTATTA 57.536 37.037 0.00 0.00 0.00 0.98
361 362 7.397761 GGCCTTCTACTAGTCATGATAGGTATT 59.602 40.741 0.00 0.00 0.00 1.89
362 363 6.893005 GGCCTTCTACTAGTCATGATAGGTAT 59.107 42.308 0.00 0.00 0.00 2.73
363 364 6.246919 GGCCTTCTACTAGTCATGATAGGTA 58.753 44.000 0.00 1.89 0.00 3.08
364 365 5.081032 GGCCTTCTACTAGTCATGATAGGT 58.919 45.833 0.00 0.69 0.00 3.08
365 366 4.464597 GGGCCTTCTACTAGTCATGATAGG 59.535 50.000 0.84 7.68 0.00 2.57
366 367 4.156922 CGGGCCTTCTACTAGTCATGATAG 59.843 50.000 0.84 4.78 0.00 2.08
367 368 4.079970 CGGGCCTTCTACTAGTCATGATA 58.920 47.826 0.84 0.00 0.00 2.15
368 369 2.894126 CGGGCCTTCTACTAGTCATGAT 59.106 50.000 0.84 0.00 0.00 2.45
369 370 2.307768 CGGGCCTTCTACTAGTCATGA 58.692 52.381 0.84 0.00 0.00 3.07
403 404 1.204467 GCATGGGAATTCGGCTTTTGA 59.796 47.619 0.00 0.00 0.00 2.69
549 550 3.888930 ACGAAGATTGCCAGAAGGAAAAA 59.111 39.130 0.00 0.00 35.55 1.94
705 789 9.988815 AAATATGAGAGCGTTTAGATTCACTAT 57.011 29.630 0.00 0.00 0.00 2.12
725 848 6.183360 TGGTACTCCCTCCGTAAAGAAATATG 60.183 42.308 0.00 0.00 0.00 1.78
762 885 8.034313 ACCTTATAATAGTGACACATGGATGT 57.966 34.615 8.59 0.00 42.84 3.06
1065 1198 2.360852 GCCTGCTGCTGTGACCAT 60.361 61.111 0.00 0.00 36.87 3.55
1275 1408 1.351017 AGGTCGGTTGTGTCCATCATT 59.649 47.619 0.00 0.00 0.00 2.57
1289 1422 4.778143 CGGGCAGGGAAAGGTCGG 62.778 72.222 0.00 0.00 0.00 4.79
1587 2966 7.928167 TCTGTCAGCATTCAGGTAAATACTATG 59.072 37.037 0.00 0.00 33.13 2.23
1593 2972 4.018960 ACCTCTGTCAGCATTCAGGTAAAT 60.019 41.667 8.13 0.00 31.23 1.40
1684 3063 6.716628 TGCTAACTTGATTTGGAGACATTTCT 59.283 34.615 0.00 0.00 42.32 2.52
1704 3083 0.313672 CAAAGTTTGGCCGCTGCTAA 59.686 50.000 7.78 0.00 36.02 3.09
1709 3088 0.104120 GGTTTCAAAGTTTGGCCGCT 59.896 50.000 15.47 0.00 0.00 5.52
1739 3119 2.642807 TCCTGATTTCGTTTTCCCCTCT 59.357 45.455 0.00 0.00 0.00 3.69



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.