Multiple sequence alignment - TraesCS5A01G330400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G330400 chr5A 100.000 5698 0 0 1 5698 539961584 539955887 0.000000e+00 10523.0
1 TraesCS5A01G330400 chr5A 85.237 1348 152 25 3134 4456 539947878 539946553 0.000000e+00 1343.0
2 TraesCS5A01G330400 chr5A 78.571 462 57 18 4453 4888 539946518 539946073 3.380000e-67 267.0
3 TraesCS5A01G330400 chr5B 90.317 4038 261 61 1266 5218 514932130 514928138 0.000000e+00 5171.0
4 TraesCS5A01G330400 chr5B 90.924 1201 64 22 64 1249 514933404 514932234 0.000000e+00 1572.0
5 TraesCS5A01G330400 chr5B 85.640 766 66 27 3702 4452 514854651 514853915 0.000000e+00 765.0
6 TraesCS5A01G330400 chr5B 83.691 233 33 3 4486 4718 514853831 514853604 1.240000e-51 215.0
7 TraesCS5A01G330400 chr5D 93.591 2871 155 17 1266 4112 425720897 425718032 0.000000e+00 4255.0
8 TraesCS5A01G330400 chr5D 90.525 1256 72 17 1 1249 425722217 425721002 0.000000e+00 1616.0
9 TraesCS5A01G330400 chr5D 88.743 915 57 24 4117 5001 425717924 425717026 0.000000e+00 1077.0
10 TraesCS5A01G330400 chr5D 85.733 778 87 14 3702 4456 425653481 425652705 0.000000e+00 800.0
11 TraesCS5A01G330400 chr5D 88.106 227 26 1 5392 5617 425716776 425716550 9.410000e-68 268.0
12 TraesCS5A01G330400 chr5D 80.882 340 43 11 4453 4785 425652670 425652346 1.230000e-61 248.0
13 TraesCS5A01G330400 chr5D 85.185 81 10 2 739 819 367999061 367998983 1.320000e-11 82.4
14 TraesCS5A01G330400 chr5D 97.143 35 1 0 5185 5219 425716901 425716867 6.170000e-05 60.2
15 TraesCS5A01G330400 chr1B 90.000 70 5 1 742 809 223137646 223137577 7.860000e-14 89.8
16 TraesCS5A01G330400 chr1B 91.803 61 5 0 739 799 130545895 130545955 1.020000e-12 86.1
17 TraesCS5A01G330400 chr6B 96.154 52 2 0 739 790 168404274 168404325 1.020000e-12 86.1
18 TraesCS5A01G330400 chr6B 89.706 68 5 2 739 805 412160287 412160221 1.020000e-12 86.1
19 TraesCS5A01G330400 chr6A 93.220 59 3 1 732 790 574647856 574647913 1.020000e-12 86.1
20 TraesCS5A01G330400 chr4B 89.855 69 4 3 739 805 238600288 238600221 1.020000e-12 86.1
21 TraesCS5A01G330400 chr7A 89.231 65 5 2 726 790 562895613 562895675 4.730000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G330400 chr5A 539955887 539961584 5697 True 10523.00 10523 100.0000 1 5698 1 chr5A.!!$R1 5697
1 TraesCS5A01G330400 chr5A 539946073 539947878 1805 True 805.00 1343 81.9040 3134 4888 2 chr5A.!!$R2 1754
2 TraesCS5A01G330400 chr5B 514928138 514933404 5266 True 3371.50 5171 90.6205 64 5218 2 chr5B.!!$R2 5154
3 TraesCS5A01G330400 chr5B 514853604 514854651 1047 True 490.00 765 84.6655 3702 4718 2 chr5B.!!$R1 1016
4 TraesCS5A01G330400 chr5D 425716550 425722217 5667 True 1455.24 4255 91.6216 1 5617 5 chr5D.!!$R3 5616
5 TraesCS5A01G330400 chr5D 425652346 425653481 1135 True 524.00 800 83.3075 3702 4785 2 chr5D.!!$R2 1083

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
67 68 0.179121 TACACCCTGTAATCTGCGCG 60.179 55.0 0.00 0.00 28.45 6.86 F
1249 1266 0.105039 GACTGATGTGATCCCGGGAC 59.895 60.0 29.69 20.25 0.00 4.46 F
1250 1267 0.617535 ACTGATGTGATCCCGGGACA 60.618 55.0 29.69 21.49 0.00 4.02 F
2125 2236 0.323999 TGCAATGAAGCTGCCATCCT 60.324 50.0 0.00 0.00 39.13 3.24 F
3061 3185 0.873721 TCATGCAACATGACACCACG 59.126 50.0 6.17 0.00 0.00 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1868 1973 0.685097 AGGAGCTGGTGCGAGTAAAA 59.315 50.000 0.00 0.00 45.42 1.52 R
2102 2213 0.245266 TGGCAGCTTCATTGCACATG 59.755 50.000 0.00 0.00 43.28 3.21 R
2479 2600 2.065899 AGGCCTTTGCAACAACAGTA 57.934 45.000 0.00 0.00 40.13 2.74 R
3543 3685 1.065926 TCAGGATTGAGATTGCTGCGT 60.066 47.619 0.00 0.00 33.07 5.24 R
5059 5446 0.030504 TTCCAAACGTGCATGTGCTG 59.969 50.000 13.39 12.81 42.66 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 3.135895 GGGCACTACATACACCCTGTAAT 59.864 47.826 0.00 0.00 36.31 1.89
61 62 4.377897 GGCACTACATACACCCTGTAATC 58.622 47.826 0.00 0.00 36.31 1.75
62 63 4.101119 GGCACTACATACACCCTGTAATCT 59.899 45.833 0.00 0.00 36.31 2.40
63 64 5.050490 GCACTACATACACCCTGTAATCTG 58.950 45.833 0.00 0.00 36.31 2.90
64 65 5.050490 CACTACATACACCCTGTAATCTGC 58.950 45.833 0.00 0.00 36.31 4.26
65 66 3.179443 ACATACACCCTGTAATCTGCG 57.821 47.619 0.00 0.00 36.31 5.18
66 67 1.867233 CATACACCCTGTAATCTGCGC 59.133 52.381 0.00 0.00 36.31 6.09
67 68 0.179121 TACACCCTGTAATCTGCGCG 60.179 55.000 0.00 0.00 28.45 6.86
68 69 2.511600 ACCCTGTAATCTGCGCGC 60.512 61.111 27.26 27.26 0.00 6.86
90 91 4.511527 CAGCTCTCCTTCAGATTGCTTTA 58.488 43.478 0.00 0.00 32.67 1.85
164 165 3.798202 AGAAGAAATCGTCATACTGGGC 58.202 45.455 0.00 0.00 0.00 5.36
167 168 3.535561 AGAAATCGTCATACTGGGCAAG 58.464 45.455 0.00 0.00 0.00 4.01
168 169 2.332063 AATCGTCATACTGGGCAAGG 57.668 50.000 0.00 0.00 0.00 3.61
188 189 4.036518 AGGCTGAGATGACCTCTATTGTT 58.963 43.478 0.00 0.00 42.44 2.83
219 220 4.709397 TGCCCCATCACTTAGTTTTATTGG 59.291 41.667 0.00 0.00 0.00 3.16
396 398 3.712016 TTCTGAAATCCGTGGGATCAA 57.288 42.857 0.00 0.00 42.27 2.57
400 402 2.571653 TGAAATCCGTGGGATCAACTCT 59.428 45.455 0.00 0.00 42.27 3.24
426 428 2.482142 GCTACAGCTATTCTCCTTGCGT 60.482 50.000 0.00 0.00 38.21 5.24
445 447 3.370209 GCGTCCCCAAGTACCTTTATCTT 60.370 47.826 0.00 0.00 0.00 2.40
465 467 7.921786 ATCTTTGTATTTTCAGGACGATTGA 57.078 32.000 0.00 0.00 0.00 2.57
520 524 2.835027 ACCTTCCTGTCGTTTTCACTC 58.165 47.619 0.00 0.00 0.00 3.51
581 586 3.879892 GTCTGAGGCATTTCTTCCATACC 59.120 47.826 0.00 0.00 0.00 2.73
628 633 8.154203 GGGTTCCTCCATTTTTAATTTGAGAAA 58.846 33.333 0.00 0.00 38.11 2.52
731 736 9.023967 GTTTCATGCCATCTGTATAAATTTGAC 57.976 33.333 0.00 0.00 0.00 3.18
732 737 7.275888 TCATGCCATCTGTATAAATTTGACC 57.724 36.000 0.00 0.00 0.00 4.02
751 767 3.758554 GACCAGGATACAACAACAGCAAT 59.241 43.478 0.00 0.00 41.41 3.56
794 811 4.892198 AGTTGGGGTAGGCTAGAGATAAA 58.108 43.478 0.00 0.00 0.00 1.40
827 844 8.655935 AGAAACCCATCTGAATAAACTTGAAT 57.344 30.769 0.00 0.00 0.00 2.57
859 876 7.687005 TTGCAGAAAATAACCGTGTTAAAAG 57.313 32.000 1.45 0.00 0.00 2.27
888 905 3.133141 AGCTTTCTCTGGTTGTTCCTC 57.867 47.619 0.00 0.00 37.07 3.71
889 906 2.439507 AGCTTTCTCTGGTTGTTCCTCA 59.560 45.455 0.00 0.00 37.07 3.86
930 947 8.675705 AATTTTCACTGGTTTATTTTCCTTGG 57.324 30.769 0.00 0.00 0.00 3.61
931 948 7.425224 TTTTCACTGGTTTATTTTCCTTGGA 57.575 32.000 0.00 0.00 0.00 3.53
932 949 6.648879 TTCACTGGTTTATTTTCCTTGGAG 57.351 37.500 0.00 0.00 0.00 3.86
933 950 5.701224 TCACTGGTTTATTTTCCTTGGAGT 58.299 37.500 0.00 0.00 0.00 3.85
934 951 6.843752 TCACTGGTTTATTTTCCTTGGAGTA 58.156 36.000 0.00 0.00 0.00 2.59
1041 1058 3.157087 GCTTGGTCTCTTTGGATTTGGA 58.843 45.455 0.00 0.00 0.00 3.53
1064 1081 6.238869 GGATTTGGATTCTCTTCTGGTATTGC 60.239 42.308 0.00 0.00 0.00 3.56
1068 1085 7.141758 TGGATTCTCTTCTGGTATTGCTATT 57.858 36.000 0.00 0.00 0.00 1.73
1071 1088 5.296151 TCTCTTCTGGTATTGCTATTGGG 57.704 43.478 0.00 0.00 0.00 4.12
1077 1094 6.415206 TCTGGTATTGCTATTGGGTACTAC 57.585 41.667 0.00 0.00 0.00 2.73
1114 1131 0.240945 GCCAACGAATGTCAAGGTGG 59.759 55.000 6.15 6.15 45.13 4.61
1129 1146 1.215423 AGGTGGGCAGTTTCTTTCACT 59.785 47.619 0.00 0.00 0.00 3.41
1192 1209 7.653311 TGCTGTATATGAACATAGTTGTGCTAG 59.347 37.037 1.20 0.00 35.83 3.42
1249 1266 0.105039 GACTGATGTGATCCCGGGAC 59.895 60.000 29.69 20.25 0.00 4.46
1250 1267 0.617535 ACTGATGTGATCCCGGGACA 60.618 55.000 29.69 21.49 0.00 4.02
1253 1270 1.306997 ATGTGATCCCGGGACACCT 60.307 57.895 34.09 27.50 34.18 4.00
1258 1363 1.273381 TGATCCCGGGACACCTTAAGA 60.273 52.381 29.69 0.00 33.28 2.10
1261 1366 3.119009 TCCCGGGACACCTTAAGATTA 57.881 47.619 22.63 0.00 33.28 1.75
1264 1369 4.590222 TCCCGGGACACCTTAAGATTATAC 59.410 45.833 22.63 0.00 33.28 1.47
1330 1435 5.609533 ACCCAGTACTACATGATGGTAAC 57.390 43.478 0.00 0.00 0.00 2.50
1332 1437 4.049186 CCAGTACTACATGATGGTAACGC 58.951 47.826 0.00 0.00 42.51 4.84
1334 1439 4.976731 CAGTACTACATGATGGTAACGCTC 59.023 45.833 0.00 0.00 42.51 5.03
1335 1440 4.888239 AGTACTACATGATGGTAACGCTCT 59.112 41.667 0.00 0.00 42.51 4.09
1347 1452 3.869832 GGTAACGCTCTTTCCTGATTACC 59.130 47.826 0.00 0.00 34.91 2.85
1401 1506 8.689972 GTGGAATATGACTCAAATTCTTTGGAT 58.310 33.333 0.19 0.00 40.98 3.41
1467 1572 8.212259 ACTATGATAGAGTATGCTTCCCAAAT 57.788 34.615 6.45 0.00 0.00 2.32
1488 1593 9.384682 CCAAATTTTTAAGCTTGCAACTAATTG 57.615 29.630 9.86 5.17 38.99 2.32
1553 1658 8.348507 GTTCTTTATATCCTCATTTCCTTGCTG 58.651 37.037 0.00 0.00 0.00 4.41
1565 1670 5.906113 TTTCCTTGCTGTTTGTTGTTAGA 57.094 34.783 0.00 0.00 0.00 2.10
1612 1717 5.070847 GGAATTGATGTGGCCCAATCTTAAT 59.929 40.000 14.10 5.71 32.36 1.40
1642 1747 6.804677 ACTTGATGCTGTAGATTACTCTGAG 58.195 40.000 2.45 2.45 32.66 3.35
1643 1748 6.379703 ACTTGATGCTGTAGATTACTCTGAGT 59.620 38.462 15.57 15.57 32.66 3.41
1778 1883 7.476667 ACTGTGAGAAGTACAAGATAGATTCG 58.523 38.462 0.00 0.00 0.00 3.34
1787 1892 7.259161 AGTACAAGATAGATTCGGTTGAGTTC 58.741 38.462 0.00 0.00 0.00 3.01
1807 1912 4.510038 TCGAAACACTTACTCTGGGTAC 57.490 45.455 0.00 0.00 0.00 3.34
1939 2048 6.070424 TCGTAGATTTGTGTTCTTATTCCCCT 60.070 38.462 0.00 0.00 0.00 4.79
2012 2122 9.083422 TCCTTCTGAACTAGAATATCAGTATGG 57.917 37.037 0.00 8.59 44.12 2.74
2013 2123 8.865090 CCTTCTGAACTAGAATATCAGTATGGT 58.135 37.037 0.00 0.00 44.12 3.55
2043 2154 4.090930 GCATGAATTTGTGAACAGATGCAC 59.909 41.667 0.00 0.00 29.89 4.57
2057 2168 3.070018 AGATGCACGCTCTTTATATGGC 58.930 45.455 0.00 0.00 0.00 4.40
2081 2192 5.003872 CGATTGTCGTGTTCAGTATCTGAAG 59.996 44.000 11.69 2.59 41.68 3.02
2094 2205 6.813649 TCAGTATCTGAAGTGCAGTTGTATTC 59.186 38.462 12.53 0.00 45.14 1.75
2100 2211 4.629634 TGAAGTGCAGTTGTATTCATACGG 59.370 41.667 12.53 0.00 36.06 4.02
2102 2213 4.181578 AGTGCAGTTGTATTCATACGGTC 58.818 43.478 0.00 0.00 36.06 4.79
2115 2226 3.622612 TCATACGGTCATGTGCAATGAAG 59.377 43.478 11.51 11.12 0.00 3.02
2125 2236 0.323999 TGCAATGAAGCTGCCATCCT 60.324 50.000 0.00 0.00 39.13 3.24
2127 2238 1.206371 GCAATGAAGCTGCCATCCTTT 59.794 47.619 0.00 0.00 33.51 3.11
2131 2242 3.650281 TGAAGCTGCCATCCTTTGATA 57.350 42.857 0.00 0.00 0.00 2.15
2136 2247 2.428171 GCTGCCATCCTTTGATAAAGCA 59.572 45.455 0.00 0.00 37.18 3.91
2216 2327 6.708054 ACTCCAGTTAATCTGCTATATGTTGC 59.292 38.462 0.00 0.00 42.38 4.17
2217 2328 5.696270 TCCAGTTAATCTGCTATATGTTGCG 59.304 40.000 0.00 0.00 42.38 4.85
2323 2444 7.776933 TTCTACTTGTGATTATGATGTGCTC 57.223 36.000 0.00 0.00 0.00 4.26
2325 2446 6.982724 TCTACTTGTGATTATGATGTGCTCTG 59.017 38.462 0.00 0.00 0.00 3.35
2417 2538 4.510167 ACCCCAGGAATGAAAGTCTATG 57.490 45.455 0.00 0.00 0.00 2.23
2491 2612 6.849085 AATCCCAATATTACTGTTGTTGCA 57.151 33.333 0.00 0.00 0.00 4.08
2500 2621 1.681264 ACTGTTGTTGCAAAGGCCTAC 59.319 47.619 5.16 0.00 40.13 3.18
2526 2647 2.811431 TGAAAGCAACCGTCCAAGTATG 59.189 45.455 0.00 0.00 0.00 2.39
2531 2652 2.415512 GCAACCGTCCAAGTATGAACTC 59.584 50.000 0.00 0.00 33.75 3.01
2539 2663 5.172205 GTCCAAGTATGAACTCCTGTCTTC 58.828 45.833 0.00 0.00 33.75 2.87
2540 2664 5.046950 GTCCAAGTATGAACTCCTGTCTTCT 60.047 44.000 0.00 0.00 33.75 2.85
2546 2670 8.367660 AGTATGAACTCCTGTCTTCTTATGAA 57.632 34.615 0.00 0.00 0.00 2.57
2571 2695 9.581099 AAAAGTATGTTTTGTGGTTTGTAGAAG 57.419 29.630 0.00 0.00 0.00 2.85
2577 2701 8.113173 TGTTTTGTGGTTTGTAGAAGTTAACT 57.887 30.769 1.12 1.12 0.00 2.24
2584 2708 9.101655 GTGGTTTGTAGAAGTTAACTTAGTGAA 57.898 33.333 20.58 9.07 36.11 3.18
2692 2816 6.699575 ACATTTCCTTGCTTCGCTAATATT 57.300 33.333 0.00 0.00 0.00 1.28
2698 2822 5.983720 TCCTTGCTTCGCTAATATTAGTGTC 59.016 40.000 27.19 19.66 41.00 3.67
2720 2844 1.138661 CTCTCATGGAGAAGGTCTGGC 59.861 57.143 5.53 0.00 44.45 4.85
2726 2850 1.902508 TGGAGAAGGTCTGGCAACTAG 59.097 52.381 0.00 0.00 37.61 2.57
2728 2852 2.303311 GGAGAAGGTCTGGCAACTAGTT 59.697 50.000 1.12 1.12 37.61 2.24
2761 2885 2.260822 ACTACCCTGCTGATCACTTGT 58.739 47.619 0.00 0.00 0.00 3.16
2878 3002 6.746745 TTACAAATTCGTTCAGGTATTCCC 57.253 37.500 0.00 0.00 0.00 3.97
2883 3007 3.003394 TCGTTCAGGTATTCCCGACTA 57.997 47.619 0.00 0.00 38.74 2.59
2909 3033 8.778358 ACTGTTCTGAATCTTCTCATGTTTAAC 58.222 33.333 0.00 0.00 0.00 2.01
2928 3052 8.352201 TGTTTAACCTTCTTCATTCTTGTCATG 58.648 33.333 0.00 0.00 0.00 3.07
2946 3070 8.458573 TTGTCATGTACTTGATTTAGGTGTTT 57.541 30.769 13.92 0.00 0.00 2.83
2947 3071 9.562408 TTGTCATGTACTTGATTTAGGTGTTTA 57.438 29.630 13.92 0.00 0.00 2.01
2984 3108 5.721876 ACTTCGTCTCTATCTCTGTAACG 57.278 43.478 0.00 0.00 0.00 3.18
2995 3119 7.251281 TCTATCTCTGTAACGTTGACATCAAG 58.749 38.462 11.99 9.04 36.39 3.02
3045 3169 8.465999 GCTTGTAGTAGTCTATATGATGCTCAT 58.534 37.037 4.45 4.45 40.72 2.90
3061 3185 0.873721 TCATGCAACATGACACCACG 59.126 50.000 6.17 0.00 0.00 4.94
3083 3207 4.682860 CGTTGTCGTGTACCTAAATCTTGT 59.317 41.667 0.00 0.00 0.00 3.16
3095 3219 6.515832 ACCTAAATCTTGTTTTTCTGCCTTG 58.484 36.000 0.00 0.00 0.00 3.61
3184 3318 3.430098 CCTGAGATGTGGTGTCTAGCTTC 60.430 52.174 0.00 0.00 0.00 3.86
3309 3446 7.453126 AGACACTAGAAGTCCCTATAATGGATG 59.547 40.741 13.79 0.00 36.68 3.51
3351 3488 2.287915 CACTCTGTGGTTGCTTGTGTAC 59.712 50.000 0.00 0.00 0.00 2.90
3407 3546 5.648960 TGCATATTGACAGAGCATCAAAGAA 59.351 36.000 0.00 0.00 39.43 2.52
3427 3566 5.249420 AGAAGCCTGTTGGAATTCTACTTC 58.751 41.667 5.23 7.99 38.39 3.01
3543 3685 7.831691 TCCATCCAAGAAAACATCAGTAAAA 57.168 32.000 0.00 0.00 0.00 1.52
3561 3703 2.119801 AACGCAGCAATCTCAATCCT 57.880 45.000 0.00 0.00 0.00 3.24
3669 3815 5.200483 TGGTTTCCTTTGTTCATGAAGTCT 58.800 37.500 8.80 0.00 0.00 3.24
3685 3831 7.657761 TCATGAAGTCTGAAGTAGTTCCTTTTC 59.342 37.037 7.84 7.22 0.00 2.29
3690 3836 7.668492 AGTCTGAAGTAGTTCCTTTTCGTATT 58.332 34.615 7.84 0.00 0.00 1.89
3733 3887 9.688592 GCAGCTAAGCTATTTCATTGATATTTT 57.311 29.630 0.00 0.00 36.40 1.82
3770 3924 2.905415 AAAGATGGGCATGAACAGGA 57.095 45.000 0.00 0.00 0.00 3.86
3809 3963 1.208293 CCCCAGAGGAGACTAAAGTGC 59.792 57.143 0.00 0.00 44.43 4.40
4165 4430 4.847198 AGGTTATGATGTGTTCTCATGCA 58.153 39.130 0.00 0.00 35.12 3.96
4184 4449 3.193267 TGCATTATGGCACTTGAGTTTCC 59.807 43.478 0.00 0.00 39.25 3.13
4193 4459 1.349357 ACTTGAGTTTCCCTCCTCTGC 59.651 52.381 0.00 0.00 39.65 4.26
4339 4608 2.902705 TGCATGGGAAGGTACGATAC 57.097 50.000 0.00 0.00 0.00 2.24
4341 4610 2.102420 TGCATGGGAAGGTACGATACTG 59.898 50.000 0.00 0.00 0.00 2.74
4345 4614 2.945008 TGGGAAGGTACGATACTGTACG 59.055 50.000 0.00 7.80 44.48 3.67
4352 4621 6.690194 AGGTACGATACTGTACGAGAAATT 57.310 37.500 13.82 0.00 44.48 1.82
4353 4622 7.093322 AGGTACGATACTGTACGAGAAATTT 57.907 36.000 13.82 0.00 44.48 1.82
4363 4637 3.385193 ACGAGAAATTTTTGGCCCTTG 57.615 42.857 0.00 0.00 0.00 3.61
4448 4726 6.704289 TCATAATGGAGAGCCTCAAAATTG 57.296 37.500 0.00 0.00 34.31 2.32
4474 4798 7.137426 CAGTTCAGTTTCTTTTGATCTTGAGG 58.863 38.462 0.00 0.00 0.00 3.86
4476 4800 4.520492 TCAGTTTCTTTTGATCTTGAGGGC 59.480 41.667 0.00 0.00 0.00 5.19
4494 4827 6.957631 TGAGGGCTTGATTAACTCTTTATGA 58.042 36.000 0.00 0.00 0.00 2.15
4513 4846 7.862512 TTATGACATGTCTTGATACAATGCA 57.137 32.000 25.55 2.51 32.02 3.96
4542 4875 6.890663 TGTCTGAAATTGTTCAAGCTTTTG 57.109 33.333 0.00 0.00 43.18 2.44
4543 4876 6.629128 TGTCTGAAATTGTTCAAGCTTTTGA 58.371 32.000 0.00 0.00 43.18 2.69
4544 4877 7.267128 TGTCTGAAATTGTTCAAGCTTTTGAT 58.733 30.769 0.00 0.00 43.18 2.57
4545 4878 7.223193 TGTCTGAAATTGTTCAAGCTTTTGATG 59.777 33.333 0.00 0.00 43.18 3.07
4546 4879 6.201425 TCTGAAATTGTTCAAGCTTTTGATGC 59.799 34.615 0.00 0.00 43.18 3.91
4547 4880 6.050432 TGAAATTGTTCAAGCTTTTGATGCT 58.950 32.000 0.00 0.00 40.87 3.79
4563 4899 9.507280 CTTTTGATGCTTACTATGTTATGTTGG 57.493 33.333 0.00 0.00 0.00 3.77
4607 4943 1.344763 GATATAGCCCTGGCAGACGTT 59.655 52.381 17.94 6.11 44.88 3.99
4703 5039 5.108517 CAGTGGAGAACTTCATAGAAGCTC 58.891 45.833 6.67 4.59 36.83 4.09
4724 5060 1.005867 AGCAAGGTGCCAAAATGCG 60.006 52.632 0.00 0.00 46.52 4.73
4787 5132 5.068198 CAGCTTGCAAATACCTGTAATGGAT 59.932 40.000 0.00 0.00 0.00 3.41
4822 5174 6.701145 ATTGCTTCGTCTCTAGAACATCTA 57.299 37.500 0.00 0.00 0.00 1.98
4889 5241 2.226437 CAGAACAACGCAGGCTTGTTAT 59.774 45.455 16.25 12.75 41.01 1.89
4890 5242 2.484264 AGAACAACGCAGGCTTGTTATC 59.516 45.455 16.25 4.81 41.01 1.75
4891 5243 0.796312 ACAACGCAGGCTTGTTATCG 59.204 50.000 0.00 0.00 0.00 2.92
4892 5244 1.075542 CAACGCAGGCTTGTTATCGA 58.924 50.000 0.00 0.00 0.00 3.59
4893 5245 1.076332 AACGCAGGCTTGTTATCGAC 58.924 50.000 0.00 0.00 0.00 4.20
4894 5246 0.037697 ACGCAGGCTTGTTATCGACA 60.038 50.000 0.00 0.00 36.19 4.35
4896 5248 1.201921 CGCAGGCTTGTTATCGACAAC 60.202 52.381 0.00 0.00 43.13 3.32
4897 5249 1.804151 GCAGGCTTGTTATCGACAACA 59.196 47.619 4.88 4.88 43.13 3.33
4898 5250 2.159653 GCAGGCTTGTTATCGACAACAG 60.160 50.000 9.52 5.63 43.13 3.16
4903 5257 4.024387 GGCTTGTTATCGACAACAGAAACA 60.024 41.667 9.52 0.00 43.13 2.83
4934 5288 2.818751 TCTTTGTGGTGACAGGGTTT 57.181 45.000 0.00 0.00 44.46 3.27
4935 5289 3.094484 TCTTTGTGGTGACAGGGTTTT 57.906 42.857 0.00 0.00 44.46 2.43
4952 5306 4.444449 GGGTTTTCTCGCCCTTACAGATAT 60.444 45.833 0.00 0.00 41.63 1.63
4978 5332 8.637986 TGCTTATGGTTTGAACAGATTAAAAGT 58.362 29.630 0.00 0.00 0.00 2.66
5024 5411 1.270907 TGCACAAAACACCAGGGTTT 58.729 45.000 0.00 0.00 42.49 3.27
5025 5412 1.066573 TGCACAAAACACCAGGGTTTG 60.067 47.619 0.00 3.47 40.64 2.93
5026 5413 1.205893 GCACAAAACACCAGGGTTTGA 59.794 47.619 11.41 0.00 40.64 2.69
5027 5414 2.887337 CACAAAACACCAGGGTTTGAC 58.113 47.619 11.41 0.00 40.64 3.18
5028 5415 2.232452 CACAAAACACCAGGGTTTGACA 59.768 45.455 11.41 0.00 40.64 3.58
5029 5416 3.103742 ACAAAACACCAGGGTTTGACAT 58.896 40.909 11.41 0.00 40.64 3.06
5030 5417 3.132111 ACAAAACACCAGGGTTTGACATC 59.868 43.478 11.41 0.00 40.64 3.06
5031 5418 3.312736 AAACACCAGGGTTTGACATCT 57.687 42.857 0.00 0.00 39.40 2.90
5033 5420 4.657814 AACACCAGGGTTTGACATCTAT 57.342 40.909 0.00 0.00 0.00 1.98
5034 5421 5.772393 AACACCAGGGTTTGACATCTATA 57.228 39.130 0.00 0.00 0.00 1.31
5035 5422 5.359194 ACACCAGGGTTTGACATCTATAG 57.641 43.478 0.00 0.00 0.00 1.31
5044 5431 4.470334 TTGACATCTATAGTGCACAGCA 57.530 40.909 21.04 3.72 35.60 4.41
5057 5444 2.405892 CACAGCAAGTGGTACAAAGC 57.594 50.000 0.00 0.00 44.16 3.51
5058 5445 0.944386 ACAGCAAGTGGTACAAAGCG 59.056 50.000 0.00 0.00 44.16 4.68
5059 5446 0.385974 CAGCAAGTGGTACAAAGCGC 60.386 55.000 0.00 0.00 44.16 5.92
5061 5448 0.385974 GCAAGTGGTACAAAGCGCAG 60.386 55.000 11.47 0.64 44.16 5.18
5076 5463 4.231753 CAGCACATGCACGTTTGG 57.768 55.556 6.64 0.00 45.16 3.28
5077 5464 1.653667 CAGCACATGCACGTTTGGA 59.346 52.632 6.64 0.00 45.16 3.53
5090 5477 4.671766 GCACGTTTGGAATATCTGGTGTTC 60.672 45.833 0.00 0.00 0.00 3.18
5093 5480 4.201685 CGTTTGGAATATCTGGTGTTCGAC 60.202 45.833 0.00 0.00 0.00 4.20
5096 5483 2.536365 GAATATCTGGTGTTCGACGCA 58.464 47.619 0.00 0.00 0.00 5.24
5097 5484 2.209838 ATATCTGGTGTTCGACGCAG 57.790 50.000 0.00 0.00 0.00 5.18
5099 5486 0.532573 ATCTGGTGTTCGACGCAGAT 59.467 50.000 8.53 8.53 37.58 2.90
5102 5489 0.865111 TGGTGTTCGACGCAGATTTG 59.135 50.000 0.00 0.00 0.00 2.32
5114 5501 2.933769 GCAGATTTGCTAACGCTGTTT 58.066 42.857 0.00 0.00 46.95 2.83
5118 5505 5.215160 CAGATTTGCTAACGCTGTTTTTCT 58.785 37.500 0.00 0.00 36.97 2.52
5119 5506 5.116074 CAGATTTGCTAACGCTGTTTTTCTG 59.884 40.000 0.00 0.00 36.97 3.02
5127 5514 3.520569 ACGCTGTTTTTCTGTGCAATTT 58.479 36.364 0.00 0.00 0.00 1.82
5132 5519 5.290643 GCTGTTTTTCTGTGCAATTTGTGTA 59.709 36.000 0.00 0.00 0.00 2.90
5137 5524 9.553418 GTTTTTCTGTGCAATTTGTGTAAATTT 57.447 25.926 0.00 0.00 42.33 1.82
5142 5529 7.651304 TCTGTGCAATTTGTGTAAATTTAGGTG 59.349 33.333 0.00 0.00 42.33 4.00
5144 5531 5.698545 TGCAATTTGTGTAAATTTAGGTGGC 59.301 36.000 0.00 0.00 42.33 5.01
5154 5541 0.669318 TTTAGGTGGCGCGAACTGAG 60.669 55.000 21.16 0.00 0.00 3.35
5155 5542 2.501223 TTAGGTGGCGCGAACTGAGG 62.501 60.000 21.16 0.00 0.00 3.86
5162 5549 1.365699 GCGCGAACTGAGGGATTTAA 58.634 50.000 12.10 0.00 0.00 1.52
5165 5552 3.059800 GCGCGAACTGAGGGATTTAATAC 60.060 47.826 12.10 0.00 0.00 1.89
5166 5553 4.369182 CGCGAACTGAGGGATTTAATACT 58.631 43.478 0.00 0.00 0.00 2.12
5168 5555 5.981315 CGCGAACTGAGGGATTTAATACTAA 59.019 40.000 0.00 0.00 0.00 2.24
5170 5557 7.148787 CGCGAACTGAGGGATTTAATACTAATC 60.149 40.741 0.00 0.00 0.00 1.75
5219 5609 2.500910 CTCAGATTGCTCCTCCACTTCT 59.499 50.000 0.00 0.00 0.00 2.85
5220 5610 3.703556 CTCAGATTGCTCCTCCACTTCTA 59.296 47.826 0.00 0.00 0.00 2.10
5221 5611 4.096681 TCAGATTGCTCCTCCACTTCTAA 58.903 43.478 0.00 0.00 0.00 2.10
5222 5612 4.532126 TCAGATTGCTCCTCCACTTCTAAA 59.468 41.667 0.00 0.00 0.00 1.85
5223 5613 4.874966 CAGATTGCTCCTCCACTTCTAAAG 59.125 45.833 0.00 0.00 0.00 1.85
5224 5614 3.703001 TTGCTCCTCCACTTCTAAAGG 57.297 47.619 0.00 0.00 0.00 3.11
5225 5615 2.621070 TGCTCCTCCACTTCTAAAGGT 58.379 47.619 0.00 0.00 0.00 3.50
5226 5616 2.979678 TGCTCCTCCACTTCTAAAGGTT 59.020 45.455 0.00 0.00 0.00 3.50
5227 5617 3.244561 TGCTCCTCCACTTCTAAAGGTTG 60.245 47.826 0.00 0.00 0.00 3.77
5228 5618 3.008049 GCTCCTCCACTTCTAAAGGTTGA 59.992 47.826 0.00 0.00 0.00 3.18
5229 5619 4.505039 GCTCCTCCACTTCTAAAGGTTGAA 60.505 45.833 0.00 0.00 0.00 2.69
5231 5621 6.200878 TCCTCCACTTCTAAAGGTTGAATT 57.799 37.500 0.00 0.00 0.00 2.17
5232 5622 6.238648 TCCTCCACTTCTAAAGGTTGAATTC 58.761 40.000 0.00 0.00 0.00 2.17
5233 5623 6.044404 TCCTCCACTTCTAAAGGTTGAATTCT 59.956 38.462 7.05 0.00 0.00 2.40
5234 5624 7.236847 TCCTCCACTTCTAAAGGTTGAATTCTA 59.763 37.037 7.05 0.00 0.00 2.10
5235 5625 7.550906 CCTCCACTTCTAAAGGTTGAATTCTAG 59.449 40.741 7.05 0.00 0.00 2.43
5236 5626 7.394816 TCCACTTCTAAAGGTTGAATTCTAGG 58.605 38.462 7.05 0.00 0.00 3.02
5237 5627 6.094186 CCACTTCTAAAGGTTGAATTCTAGGC 59.906 42.308 7.05 0.00 0.00 3.93
5238 5628 6.094186 CACTTCTAAAGGTTGAATTCTAGGCC 59.906 42.308 7.05 0.00 0.00 5.19
5239 5629 4.766375 TCTAAAGGTTGAATTCTAGGCCG 58.234 43.478 7.05 0.00 0.00 6.13
5240 5630 3.434940 AAAGGTTGAATTCTAGGCCGT 57.565 42.857 7.05 0.00 0.00 5.68
5241 5631 3.434940 AAGGTTGAATTCTAGGCCGTT 57.565 42.857 7.05 0.00 0.00 4.44
5242 5632 3.434940 AGGTTGAATTCTAGGCCGTTT 57.565 42.857 7.05 0.00 0.00 3.60
5243 5633 3.081804 AGGTTGAATTCTAGGCCGTTTG 58.918 45.455 7.05 0.00 0.00 2.93
5244 5634 2.817844 GGTTGAATTCTAGGCCGTTTGT 59.182 45.455 7.05 0.00 0.00 2.83
5245 5635 3.119955 GGTTGAATTCTAGGCCGTTTGTC 60.120 47.826 7.05 0.00 0.00 3.18
5246 5636 3.410631 TGAATTCTAGGCCGTTTGTCA 57.589 42.857 7.05 0.00 0.00 3.58
5247 5637 3.334691 TGAATTCTAGGCCGTTTGTCAG 58.665 45.455 7.05 0.00 0.00 3.51
5248 5638 1.739067 ATTCTAGGCCGTTTGTCAGC 58.261 50.000 0.00 0.00 0.00 4.26
5249 5639 0.394938 TTCTAGGCCGTTTGTCAGCA 59.605 50.000 0.00 0.00 0.00 4.41
5250 5640 0.394938 TCTAGGCCGTTTGTCAGCAA 59.605 50.000 0.00 0.00 0.00 3.91
5251 5641 0.798776 CTAGGCCGTTTGTCAGCAAG 59.201 55.000 0.00 0.00 35.82 4.01
5252 5642 0.107831 TAGGCCGTTTGTCAGCAAGT 59.892 50.000 0.00 0.00 35.82 3.16
5253 5643 0.751643 AGGCCGTTTGTCAGCAAGTT 60.752 50.000 0.00 0.00 35.82 2.66
5254 5644 0.317854 GGCCGTTTGTCAGCAAGTTC 60.318 55.000 0.00 0.00 35.82 3.01
5255 5645 0.380378 GCCGTTTGTCAGCAAGTTCA 59.620 50.000 0.00 0.00 35.82 3.18
5256 5646 1.597937 GCCGTTTGTCAGCAAGTTCAG 60.598 52.381 0.00 0.00 35.82 3.02
5257 5647 1.939934 CCGTTTGTCAGCAAGTTCAGA 59.060 47.619 0.00 0.00 35.82 3.27
5258 5648 2.549754 CCGTTTGTCAGCAAGTTCAGAT 59.450 45.455 0.00 0.00 35.82 2.90
5259 5649 3.003689 CCGTTTGTCAGCAAGTTCAGATT 59.996 43.478 0.00 0.00 35.82 2.40
5260 5650 4.213270 CCGTTTGTCAGCAAGTTCAGATTA 59.787 41.667 0.00 0.00 35.82 1.75
5261 5651 5.140177 CGTTTGTCAGCAAGTTCAGATTAC 58.860 41.667 0.00 0.00 35.82 1.89
5262 5652 5.277297 CGTTTGTCAGCAAGTTCAGATTACA 60.277 40.000 0.00 0.00 35.82 2.41
5263 5653 6.566564 CGTTTGTCAGCAAGTTCAGATTACAT 60.567 38.462 0.00 0.00 35.82 2.29
5264 5654 6.486253 TTGTCAGCAAGTTCAGATTACATC 57.514 37.500 0.00 0.00 0.00 3.06
5265 5655 5.798132 TGTCAGCAAGTTCAGATTACATCT 58.202 37.500 0.00 0.00 41.15 2.90
5266 5656 7.308169 TTTGTCAGCAAGTTCAGATTACATCTG 60.308 37.037 7.34 7.34 45.15 2.90
5278 5668 6.090483 AGATTACATCTGGTGTTCGATAGG 57.910 41.667 0.00 0.00 42.29 2.57
5279 5669 4.665833 TTACATCTGGTGTTCGATAGGG 57.334 45.455 0.00 0.00 42.29 3.53
5280 5670 2.467880 ACATCTGGTGTTCGATAGGGT 58.532 47.619 0.00 0.00 38.01 4.34
5281 5671 2.838202 ACATCTGGTGTTCGATAGGGTT 59.162 45.455 0.00 0.00 38.01 4.11
5282 5672 4.028131 ACATCTGGTGTTCGATAGGGTTA 58.972 43.478 0.00 0.00 38.01 2.85
5294 5684 5.878627 TCGATAGGGTTAAAGGTTTTTCCA 58.121 37.500 0.00 0.00 39.02 3.53
5295 5685 6.305411 TCGATAGGGTTAAAGGTTTTTCCAA 58.695 36.000 0.00 0.00 39.02 3.53
5297 5687 4.659111 AGGGTTAAAGGTTTTTCCAACG 57.341 40.909 0.00 0.00 39.02 4.10
5310 5700 2.256158 CAACGTGCCCACATGCTG 59.744 61.111 0.00 0.00 36.15 4.41
5315 5705 4.600055 TGCCCACATGCTGCCACA 62.600 61.111 0.00 0.00 0.00 4.17
5326 5720 1.338484 TGCTGCCACAGAGTTCTCATC 60.338 52.381 0.00 0.00 32.44 2.92
5336 5730 5.866633 CACAGAGTTCTCATCAGTAGTTTCC 59.133 44.000 2.64 0.00 0.00 3.13
5343 5737 3.937706 CTCATCAGTAGTTTCCCAAGCAG 59.062 47.826 0.00 0.00 0.00 4.24
5347 5741 3.117663 TCAGTAGTTTCCCAAGCAGGTTT 60.118 43.478 0.00 0.00 34.66 3.27
5351 5745 3.103742 AGTTTCCCAAGCAGGTTTTCAA 58.896 40.909 0.00 0.00 34.66 2.69
5366 5760 6.263168 CAGGTTTTCAACAGTAGTTTCTCCAT 59.737 38.462 0.00 0.00 35.28 3.41
5369 5763 7.201785 GGTTTTCAACAGTAGTTTCTCCATCAA 60.202 37.037 0.00 0.00 35.28 2.57
5397 5791 4.636206 AGATTGAATTCTAGGCCGTTTGTC 59.364 41.667 7.05 0.00 0.00 3.18
5400 5794 3.007506 TGAATTCTAGGCCGTTTGTCAGA 59.992 43.478 7.05 0.00 0.00 3.27
5401 5795 3.695830 ATTCTAGGCCGTTTGTCAGAA 57.304 42.857 0.00 0.00 0.00 3.02
5402 5796 3.478857 TTCTAGGCCGTTTGTCAGAAA 57.521 42.857 0.00 0.00 0.00 2.52
5403 5797 3.040147 TCTAGGCCGTTTGTCAGAAAG 57.960 47.619 0.00 0.00 0.00 2.62
5404 5798 2.367567 TCTAGGCCGTTTGTCAGAAAGT 59.632 45.455 0.00 0.00 0.00 2.66
5405 5799 1.594331 AGGCCGTTTGTCAGAAAGTC 58.406 50.000 0.00 0.00 0.00 3.01
5406 5800 0.591659 GGCCGTTTGTCAGAAAGTCC 59.408 55.000 0.00 0.00 0.00 3.85
5407 5801 1.305201 GCCGTTTGTCAGAAAGTCCA 58.695 50.000 0.00 0.00 0.00 4.02
5408 5802 1.264288 GCCGTTTGTCAGAAAGTCCAG 59.736 52.381 0.00 0.00 0.00 3.86
5409 5803 2.833794 CCGTTTGTCAGAAAGTCCAGA 58.166 47.619 0.00 0.00 0.00 3.86
5410 5804 3.403038 CCGTTTGTCAGAAAGTCCAGAT 58.597 45.455 0.00 0.00 0.00 2.90
5411 5805 3.815401 CCGTTTGTCAGAAAGTCCAGATT 59.185 43.478 0.00 0.00 0.00 2.40
5412 5806 4.319766 CCGTTTGTCAGAAAGTCCAGATTG 60.320 45.833 0.00 0.00 0.00 2.67
5413 5807 4.319766 CGTTTGTCAGAAAGTCCAGATTGG 60.320 45.833 0.00 0.00 39.43 3.16
5414 5808 4.705110 TTGTCAGAAAGTCCAGATTGGA 57.295 40.909 0.00 0.00 45.98 3.53
5424 5818 1.694150 TCCAGATTGGATTCTAGGCCG 59.306 52.381 0.00 0.00 42.67 6.13
5425 5819 1.417890 CCAGATTGGATTCTAGGCCGT 59.582 52.381 0.00 0.00 40.96 5.68
5426 5820 2.158755 CCAGATTGGATTCTAGGCCGTT 60.159 50.000 0.00 0.00 40.96 4.44
5427 5821 3.545703 CAGATTGGATTCTAGGCCGTTT 58.454 45.455 0.00 0.00 0.00 3.60
5428 5822 3.313526 CAGATTGGATTCTAGGCCGTTTG 59.686 47.826 0.00 0.00 0.00 2.93
5429 5823 2.871096 TTGGATTCTAGGCCGTTTGT 57.129 45.000 0.00 0.00 0.00 2.83
5430 5824 2.871096 TGGATTCTAGGCCGTTTGTT 57.129 45.000 0.00 0.00 0.00 2.83
5431 5825 3.985019 TGGATTCTAGGCCGTTTGTTA 57.015 42.857 0.00 0.00 0.00 2.41
5432 5826 3.869065 TGGATTCTAGGCCGTTTGTTAG 58.131 45.455 0.00 0.00 0.00 2.34
5433 5827 3.262405 TGGATTCTAGGCCGTTTGTTAGT 59.738 43.478 0.00 0.00 0.00 2.24
5441 5835 1.530323 CCGTTTGTTAGTGGAAGGGG 58.470 55.000 0.00 0.00 0.00 4.79
5444 5838 2.525368 GTTTGTTAGTGGAAGGGGCAT 58.475 47.619 0.00 0.00 0.00 4.40
5512 5906 7.031975 GGATTTCTCACACTTGATCAATTTCC 58.968 38.462 8.96 1.19 0.00 3.13
5515 5909 6.564709 TCTCACACTTGATCAATTTCCAAG 57.435 37.500 8.96 0.00 42.04 3.61
5518 5912 3.569701 ACACTTGATCAATTTCCAAGCGT 59.430 39.130 8.96 0.00 40.51 5.07
5523 5917 5.957842 TGATCAATTTCCAAGCGTAAGTT 57.042 34.783 0.00 0.00 41.68 2.66
5524 5918 5.698832 TGATCAATTTCCAAGCGTAAGTTG 58.301 37.500 0.00 0.00 41.68 3.16
5526 5920 4.854399 TCAATTTCCAAGCGTAAGTTGTG 58.146 39.130 0.00 0.00 41.68 3.33
5532 5926 2.223377 CCAAGCGTAAGTTGTGAAGGAC 59.777 50.000 0.00 0.00 41.68 3.85
5536 5930 2.056577 CGTAAGTTGTGAAGGACGGTC 58.943 52.381 0.00 0.00 0.00 4.79
5546 5940 2.151202 GAAGGACGGTCAAATTGAGCA 58.849 47.619 22.60 0.00 44.51 4.26
5548 5942 2.359900 AGGACGGTCAAATTGAGCATC 58.640 47.619 22.60 17.59 44.51 3.91
5566 5960 3.672295 CTTCCCAGCCCTCTCACGC 62.672 68.421 0.00 0.00 0.00 5.34
5573 5967 1.377202 GCCCTCTCACGCCATCAAA 60.377 57.895 0.00 0.00 0.00 2.69
5585 5979 1.202188 GCCATCAAACTTTCTAGCCGC 60.202 52.381 0.00 0.00 0.00 6.53
5593 5987 3.906720 ACTTTCTAGCCGCCTGATTTA 57.093 42.857 0.00 0.00 0.00 1.40
5607 6001 5.511571 GCCTGATTTAGCGTCCTAATTTTC 58.488 41.667 0.00 0.00 33.75 2.29
5609 6003 5.823045 CCTGATTTAGCGTCCTAATTTTCCT 59.177 40.000 0.00 0.00 33.75 3.36
5617 6011 3.268330 GTCCTAATTTTCCTGTCCGTCC 58.732 50.000 0.00 0.00 0.00 4.79
5618 6012 2.907696 TCCTAATTTTCCTGTCCGTCCA 59.092 45.455 0.00 0.00 0.00 4.02
5619 6013 3.328343 TCCTAATTTTCCTGTCCGTCCAA 59.672 43.478 0.00 0.00 0.00 3.53
5620 6014 4.018779 TCCTAATTTTCCTGTCCGTCCAAT 60.019 41.667 0.00 0.00 0.00 3.16
5621 6015 4.705023 CCTAATTTTCCTGTCCGTCCAATT 59.295 41.667 0.00 0.00 0.00 2.32
5622 6016 5.185056 CCTAATTTTCCTGTCCGTCCAATTT 59.815 40.000 0.00 0.00 0.00 1.82
5623 6017 5.545063 AATTTTCCTGTCCGTCCAATTTT 57.455 34.783 0.00 0.00 0.00 1.82
5624 6018 5.545063 ATTTTCCTGTCCGTCCAATTTTT 57.455 34.783 0.00 0.00 0.00 1.94
5651 6045 2.002586 GACATTCTGTCCGTGTGATGG 58.997 52.381 0.00 0.00 41.37 3.51
5652 6046 0.729116 CATTCTGTCCGTGTGATGGC 59.271 55.000 0.00 0.00 0.00 4.40
5653 6047 0.615331 ATTCTGTCCGTGTGATGGCT 59.385 50.000 0.00 0.00 0.00 4.75
5654 6048 0.396435 TTCTGTCCGTGTGATGGCTT 59.604 50.000 0.00 0.00 0.00 4.35
5655 6049 0.037326 TCTGTCCGTGTGATGGCTTC 60.037 55.000 0.00 0.00 0.00 3.86
5656 6050 1.003839 TGTCCGTGTGATGGCTTCC 60.004 57.895 0.00 0.00 0.00 3.46
5657 6051 1.296715 GTCCGTGTGATGGCTTCCT 59.703 57.895 0.00 0.00 0.00 3.36
5658 6052 0.741221 GTCCGTGTGATGGCTTCCTC 60.741 60.000 0.00 0.00 0.00 3.71
5659 6053 1.191489 TCCGTGTGATGGCTTCCTCA 61.191 55.000 0.00 0.00 0.00 3.86
5660 6054 0.107508 CCGTGTGATGGCTTCCTCAT 60.108 55.000 0.00 0.00 0.00 2.90
5661 6055 1.293924 CGTGTGATGGCTTCCTCATC 58.706 55.000 0.00 0.00 40.85 2.92
5662 6056 1.673168 GTGTGATGGCTTCCTCATCC 58.327 55.000 0.00 0.00 40.02 3.51
5663 6057 1.211457 GTGTGATGGCTTCCTCATCCT 59.789 52.381 0.00 0.00 40.02 3.24
5664 6058 1.211212 TGTGATGGCTTCCTCATCCTG 59.789 52.381 0.00 0.00 40.02 3.86
5665 6059 1.211457 GTGATGGCTTCCTCATCCTGT 59.789 52.381 0.00 0.00 40.02 4.00
5666 6060 1.211212 TGATGGCTTCCTCATCCTGTG 59.789 52.381 0.00 0.00 40.02 3.66
5667 6061 1.487976 GATGGCTTCCTCATCCTGTGA 59.512 52.381 0.00 0.00 36.06 3.58
5668 6062 1.588239 TGGCTTCCTCATCCTGTGAT 58.412 50.000 0.00 0.00 35.97 3.06
5669 6063 1.918262 TGGCTTCCTCATCCTGTGATT 59.082 47.619 0.00 0.00 35.97 2.57
5670 6064 3.114606 TGGCTTCCTCATCCTGTGATTA 58.885 45.455 0.00 0.00 35.97 1.75
5671 6065 3.523157 TGGCTTCCTCATCCTGTGATTAA 59.477 43.478 0.00 0.00 35.97 1.40
5672 6066 3.879892 GGCTTCCTCATCCTGTGATTAAC 59.120 47.826 0.00 0.00 35.97 2.01
5673 6067 4.517285 GCTTCCTCATCCTGTGATTAACA 58.483 43.478 0.00 0.00 35.97 2.41
5689 6083 9.549078 TGTGATTAACAGTCAACACTTTATACA 57.451 29.630 0.00 0.00 33.78 2.29
5693 6087 9.840427 ATTAACAGTCAACACTTTATACAATGC 57.160 29.630 0.00 0.00 0.00 3.56
5694 6088 6.875948 ACAGTCAACACTTTATACAATGCA 57.124 33.333 0.00 0.00 0.00 3.96
5695 6089 7.270757 ACAGTCAACACTTTATACAATGCAA 57.729 32.000 0.00 0.00 0.00 4.08
5696 6090 7.711846 ACAGTCAACACTTTATACAATGCAAA 58.288 30.769 0.00 0.00 0.00 3.68
5697 6091 8.194104 ACAGTCAACACTTTATACAATGCAAAA 58.806 29.630 0.00 0.00 0.00 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 4.260375 GCAACACATCCGTATTGCTAAGAG 60.260 45.833 1.52 0.00 43.26 2.85
21 22 1.750193 CCCAAGCAACACATCCGTAT 58.250 50.000 0.00 0.00 0.00 3.06
22 23 0.958382 GCCCAAGCAACACATCCGTA 60.958 55.000 0.00 0.00 39.53 4.02
35 36 1.559682 AGGGTGTATGTAGTGCCCAAG 59.440 52.381 0.00 0.00 41.67 3.61
38 39 0.909623 ACAGGGTGTATGTAGTGCCC 59.090 55.000 0.00 0.00 39.60 5.36
42 43 4.202121 CGCAGATTACAGGGTGTATGTAGT 60.202 45.833 0.00 0.00 34.76 2.73
43 44 4.299155 CGCAGATTACAGGGTGTATGTAG 58.701 47.826 0.00 0.00 34.76 2.74
44 45 3.491964 GCGCAGATTACAGGGTGTATGTA 60.492 47.826 0.30 0.00 32.20 2.29
64 65 2.625973 ATCTGAAGGAGAGCTGCGCG 62.626 60.000 0.00 0.00 32.80 6.86
65 66 0.461693 AATCTGAAGGAGAGCTGCGC 60.462 55.000 0.00 0.00 32.80 6.09
66 67 1.288350 CAATCTGAAGGAGAGCTGCG 58.712 55.000 0.00 0.00 32.80 5.18
67 68 1.015868 GCAATCTGAAGGAGAGCTGC 58.984 55.000 0.00 0.00 36.70 5.25
68 69 2.695127 AGCAATCTGAAGGAGAGCTG 57.305 50.000 0.00 0.00 36.88 4.24
139 140 6.051717 CCCAGTATGACGATTTCTTCTTCAT 58.948 40.000 0.00 1.10 43.55 2.57
141 142 4.271291 GCCCAGTATGACGATTTCTTCTTC 59.729 45.833 0.00 0.00 39.69 2.87
143 144 3.197766 TGCCCAGTATGACGATTTCTTCT 59.802 43.478 0.00 0.00 39.69 2.85
152 153 1.091771 CAGCCTTGCCCAGTATGACG 61.092 60.000 0.00 0.00 39.69 4.35
159 160 0.747283 GTCATCTCAGCCTTGCCCAG 60.747 60.000 0.00 0.00 0.00 4.45
164 165 4.141756 ACAATAGAGGTCATCTCAGCCTTG 60.142 45.833 0.00 0.00 44.81 3.61
167 168 4.414337 AACAATAGAGGTCATCTCAGCC 57.586 45.455 0.00 0.00 44.81 4.85
168 169 5.423015 TCAAACAATAGAGGTCATCTCAGC 58.577 41.667 0.00 0.00 44.81 4.26
188 189 5.765510 ACTAAGTGATGGGGCAATTATCAA 58.234 37.500 0.00 0.00 33.10 2.57
219 220 5.170021 TCATGGATTGTAAATTGCAAGTGC 58.830 37.500 4.94 0.00 42.50 4.40
445 447 6.652900 TGATGTCAATCGTCCTGAAAATACAA 59.347 34.615 0.00 0.00 35.37 2.41
504 506 4.066646 TCAATGAGTGAAAACGACAGGA 57.933 40.909 0.00 0.00 31.51 3.86
581 586 0.320683 TCAGTGCAGATTCCACCACG 60.321 55.000 0.00 0.00 33.75 4.94
628 633 8.230486 CGATTCTGAAAGTTAACATAAAGCAGT 58.770 33.333 8.61 0.00 33.76 4.40
731 736 5.895636 TTATTGCTGTTGTTGTATCCTGG 57.104 39.130 0.00 0.00 0.00 4.45
732 737 5.801947 GCTTTATTGCTGTTGTTGTATCCTG 59.198 40.000 0.00 0.00 0.00 3.86
794 811 1.561542 CAGATGGGTTTCTGTAGGGCT 59.438 52.381 0.00 0.00 38.64 5.19
827 844 7.554835 ACACGGTTATTTTCTGCAAATATCCTA 59.445 33.333 13.97 0.00 41.42 2.94
848 865 4.905269 GCTAATACCAGCTTTTAACACGG 58.095 43.478 0.00 0.00 38.57 4.94
859 876 4.143986 ACCAGAGAAAGCTAATACCAGC 57.856 45.455 0.00 0.00 42.12 4.85
906 923 8.028652 TCCAAGGAAAATAAACCAGTGAAAAT 57.971 30.769 0.00 0.00 0.00 1.82
909 926 6.133356 ACTCCAAGGAAAATAAACCAGTGAA 58.867 36.000 0.00 0.00 0.00 3.18
910 927 5.701224 ACTCCAAGGAAAATAAACCAGTGA 58.299 37.500 0.00 0.00 0.00 3.41
911 928 7.176690 ACATACTCCAAGGAAAATAAACCAGTG 59.823 37.037 0.00 0.00 0.00 3.66
912 929 7.238710 ACATACTCCAAGGAAAATAAACCAGT 58.761 34.615 0.00 0.00 0.00 4.00
913 930 7.703058 ACATACTCCAAGGAAAATAAACCAG 57.297 36.000 0.00 0.00 0.00 4.00
915 932 7.817478 CCAAACATACTCCAAGGAAAATAAACC 59.183 37.037 0.00 0.00 0.00 3.27
916 933 8.364894 ACCAAACATACTCCAAGGAAAATAAAC 58.635 33.333 0.00 0.00 0.00 2.01
917 934 8.485578 ACCAAACATACTCCAAGGAAAATAAA 57.514 30.769 0.00 0.00 0.00 1.40
918 935 8.485578 AACCAAACATACTCCAAGGAAAATAA 57.514 30.769 0.00 0.00 0.00 1.40
920 937 6.994421 AACCAAACATACTCCAAGGAAAAT 57.006 33.333 0.00 0.00 0.00 1.82
921 938 6.800072 AAACCAAACATACTCCAAGGAAAA 57.200 33.333 0.00 0.00 0.00 2.29
922 939 6.578023 CAAAACCAAACATACTCCAAGGAAA 58.422 36.000 0.00 0.00 0.00 3.13
923 940 5.452636 GCAAAACCAAACATACTCCAAGGAA 60.453 40.000 0.00 0.00 0.00 3.36
924 941 4.038642 GCAAAACCAAACATACTCCAAGGA 59.961 41.667 0.00 0.00 0.00 3.36
925 942 4.202202 TGCAAAACCAAACATACTCCAAGG 60.202 41.667 0.00 0.00 0.00 3.61
926 943 4.942852 TGCAAAACCAAACATACTCCAAG 58.057 39.130 0.00 0.00 0.00 3.61
927 944 5.344743 TTGCAAAACCAAACATACTCCAA 57.655 34.783 0.00 0.00 0.00 3.53
928 945 5.543507 ATTGCAAAACCAAACATACTCCA 57.456 34.783 1.71 0.00 0.00 3.86
929 946 6.705825 AGAAATTGCAAAACCAAACATACTCC 59.294 34.615 1.71 0.00 0.00 3.85
930 947 7.437862 TCAGAAATTGCAAAACCAAACATACTC 59.562 33.333 1.71 0.00 0.00 2.59
931 948 7.271511 TCAGAAATTGCAAAACCAAACATACT 58.728 30.769 1.71 0.00 0.00 2.12
932 949 7.475771 TCAGAAATTGCAAAACCAAACATAC 57.524 32.000 1.71 0.00 0.00 2.39
933 950 9.421806 CTATCAGAAATTGCAAAACCAAACATA 57.578 29.630 1.71 0.00 0.00 2.29
934 951 8.149647 TCTATCAGAAATTGCAAAACCAAACAT 58.850 29.630 1.71 0.00 0.00 2.71
990 1007 1.202580 ACTACGCCCATCTCTGATTGC 60.203 52.381 0.00 0.00 0.00 3.56
1041 1058 6.430007 AGCAATACCAGAAGAGAATCCAAAT 58.570 36.000 0.00 0.00 33.66 2.32
1064 1081 9.357161 AGTAGATGAAGAAGTAGTACCCAATAG 57.643 37.037 0.00 0.00 0.00 1.73
1068 1085 6.606395 GGAAGTAGATGAAGAAGTAGTACCCA 59.394 42.308 0.00 0.00 0.00 4.51
1071 1088 7.197703 GCTGGAAGTAGATGAAGAAGTAGTAC 58.802 42.308 0.00 0.00 35.30 2.73
1077 1094 4.478206 TGGCTGGAAGTAGATGAAGAAG 57.522 45.455 0.00 0.00 35.30 2.85
1114 1131 2.952310 AGGTTCAGTGAAAGAAACTGCC 59.048 45.455 7.25 1.92 41.26 4.85
1162 1179 8.450180 CACAACTATGTTCATATACAGCAACAA 58.550 33.333 0.00 0.00 37.82 2.83
1222 1239 5.118990 CGGGATCACATCAGTCAAAATAGT 58.881 41.667 0.00 0.00 0.00 2.12
1223 1240 4.512944 CCGGGATCACATCAGTCAAAATAG 59.487 45.833 0.00 0.00 0.00 1.73
1249 1266 8.818057 CGAACAAAGAGGTATAATCTTAAGGTG 58.182 37.037 1.85 1.31 35.98 4.00
1250 1267 7.985752 CCGAACAAAGAGGTATAATCTTAAGGT 59.014 37.037 1.85 0.00 35.98 3.50
1253 1270 9.729281 AAACCGAACAAAGAGGTATAATCTTAA 57.271 29.630 2.70 0.00 35.98 1.85
1261 1366 8.316214 TCAGTTATAAACCGAACAAAGAGGTAT 58.684 33.333 0.00 0.00 37.26 2.73
1264 1369 7.611213 ATCAGTTATAAACCGAACAAAGAGG 57.389 36.000 0.00 0.00 0.00 3.69
1293 1398 2.765689 TGGGTTTGACCAGGAACATT 57.234 45.000 0.00 0.00 41.02 2.71
1330 1435 4.253685 TGAAAGGTAATCAGGAAAGAGCG 58.746 43.478 0.00 0.00 0.00 5.03
1347 1452 2.092838 GCGAACTTCGACATCCTGAAAG 59.907 50.000 15.43 0.00 43.74 2.62
1511 1616 7.986085 ATAAAGAACTGTGAACTGCTACAAT 57.014 32.000 0.00 0.00 0.00 2.71
1553 1658 6.446318 TGAGCCAATCAATCTAACAACAAAC 58.554 36.000 0.00 0.00 34.02 2.93
1612 1717 8.534954 AGTAATCTACAGCATCAAGTACCTTA 57.465 34.615 0.00 0.00 0.00 2.69
1642 1747 7.280876 TGCCAATCAGAGATAAACATCTTACAC 59.719 37.037 0.00 0.00 0.00 2.90
1643 1748 7.337938 TGCCAATCAGAGATAAACATCTTACA 58.662 34.615 0.00 0.00 0.00 2.41
1778 1883 5.048507 AGAGTAAGTGTTTCGAACTCAACC 58.951 41.667 12.35 0.00 39.20 3.77
1787 1892 3.257624 AGGTACCCAGAGTAAGTGTTTCG 59.742 47.826 8.74 0.00 31.05 3.46
1807 1912 2.514803 CTTGAAAGGTGGGTGGTAAGG 58.485 52.381 0.00 0.00 0.00 2.69
1808 1913 2.514803 CCTTGAAAGGTGGGTGGTAAG 58.485 52.381 0.57 0.00 41.41 2.34
1830 1935 6.366332 CGCCTTATGCCTAAGAAATACTACTG 59.634 42.308 10.05 0.00 37.16 2.74
1868 1973 0.685097 AGGAGCTGGTGCGAGTAAAA 59.315 50.000 0.00 0.00 45.42 1.52
1939 2048 6.934056 AGCTGCATTATCCATTTGTGTTAAA 58.066 32.000 1.02 0.00 0.00 1.52
1987 2097 8.865090 ACCATACTGATATTCTAGTTCAGAAGG 58.135 37.037 16.19 15.20 46.37 3.46
2015 2125 7.631822 CATCTGTTCACAAATTCATGCAAAAA 58.368 30.769 0.00 0.00 0.00 1.94
2016 2126 6.292973 GCATCTGTTCACAAATTCATGCAAAA 60.293 34.615 0.00 0.00 0.00 2.44
2043 2154 5.606011 ACGACAATCGCCATATAAAGAGCG 61.606 45.833 0.00 0.00 45.12 5.03
2057 2168 4.412207 TCAGATACTGAACACGACAATCG 58.588 43.478 0.00 0.00 40.75 3.34
2081 2192 3.930229 TGACCGTATGAATACAACTGCAC 59.070 43.478 1.66 0.00 32.87 4.57
2094 2205 3.789791 GCTTCATTGCACATGACCGTATG 60.790 47.826 0.00 0.00 0.00 2.39
2100 2211 1.625616 GCAGCTTCATTGCACATGAC 58.374 50.000 0.00 0.00 41.17 3.06
2102 2213 0.245266 TGGCAGCTTCATTGCACATG 59.755 50.000 0.00 0.00 43.28 3.21
2115 2226 2.428171 TGCTTTATCAAAGGATGGCAGC 59.572 45.455 0.00 0.00 38.93 5.25
2125 2236 7.234577 AGGTTCCCAAATAACTGCTTTATCAAA 59.765 33.333 0.00 0.00 29.39 2.69
2127 2238 6.252995 AGGTTCCCAAATAACTGCTTTATCA 58.747 36.000 0.00 0.00 29.39 2.15
2131 2242 5.641155 AGTAGGTTCCCAAATAACTGCTTT 58.359 37.500 0.00 0.00 0.00 3.51
2136 2247 7.932683 AGCTATAGTAGGTTCCCAAATAACT 57.067 36.000 0.84 0.00 31.36 2.24
2189 2300 6.763355 ACATATAGCAGATTAACTGGAGTGG 58.237 40.000 0.00 0.00 45.82 4.00
2216 2327 9.198837 TGTAATTGCAATGTACTATGGTATACG 57.801 33.333 13.82 0.00 0.00 3.06
2331 2452 5.789643 ATAATTGAACACCAGCACTTGTT 57.210 34.783 0.00 0.00 38.67 2.83
2332 2453 7.176515 TCAATATAATTGAACACCAGCACTTGT 59.823 33.333 0.00 0.00 0.00 3.16
2335 2456 7.557358 TGATCAATATAATTGAACACCAGCACT 59.443 33.333 6.43 0.00 31.55 4.40
2392 2513 3.267031 AGACTTTCATTCCTGGGGTAAGG 59.733 47.826 0.00 0.00 38.84 2.69
2396 2517 3.852578 ACATAGACTTTCATTCCTGGGGT 59.147 43.478 0.00 0.00 0.00 4.95
2417 2538 3.914312 TCAACTCTTTCTCATCGGTGAC 58.086 45.455 0.00 0.00 0.00 3.67
2479 2600 2.065899 AGGCCTTTGCAACAACAGTA 57.934 45.000 0.00 0.00 40.13 2.74
2515 2636 3.193691 AGACAGGAGTTCATACTTGGACG 59.806 47.826 0.00 0.00 36.37 4.79
2521 2642 7.962995 TCATAAGAAGACAGGAGTTCATACT 57.037 36.000 0.00 0.00 37.31 2.12
2526 2647 7.971183 ACTTTTCATAAGAAGACAGGAGTTC 57.029 36.000 0.00 0.00 34.71 3.01
2540 2664 9.877178 ACAAACCACAAAACATACTTTTCATAA 57.123 25.926 0.00 0.00 0.00 1.90
2546 2670 8.745590 ACTTCTACAAACCACAAAACATACTTT 58.254 29.630 0.00 0.00 0.00 2.66
2638 2762 2.358267 CGGCTTCAGAGTAATACGAGGT 59.642 50.000 0.00 0.00 0.00 3.85
2726 2850 5.353400 GCAGGGTAGTAAGAATACAACCAAC 59.647 44.000 0.00 0.00 34.29 3.77
2728 2852 4.781087 AGCAGGGTAGTAAGAATACAACCA 59.219 41.667 0.00 0.00 34.29 3.67
2781 2905 3.312973 ACATGTGGCTGCAAAACAAATTG 59.687 39.130 0.00 0.00 0.00 2.32
2878 3002 5.944013 TGAGAAGATTCAGAACAGTAGTCG 58.056 41.667 0.00 0.00 0.00 4.18
2883 3007 8.778358 GTTAAACATGAGAAGATTCAGAACAGT 58.222 33.333 0.00 0.00 0.00 3.55
2909 3033 7.388776 TCAAGTACATGACAAGAATGAAGAAGG 59.611 37.037 0.00 0.00 0.00 3.46
2963 3087 5.721876 ACGTTACAGAGATAGAGACGAAG 57.278 43.478 0.00 0.00 33.67 3.79
2967 3091 6.179504 TGTCAACGTTACAGAGATAGAGAC 57.820 41.667 0.00 0.05 0.00 3.36
2971 3095 7.030165 ACTTGATGTCAACGTTACAGAGATAG 58.970 38.462 0.00 0.00 0.00 2.08
2973 3097 5.784177 ACTTGATGTCAACGTTACAGAGAT 58.216 37.500 0.00 0.00 0.00 2.75
2984 3108 9.117145 CATACATACAACAAACTTGATGTCAAC 57.883 33.333 8.43 0.00 42.20 3.18
2995 3119 5.371115 ACAGTGGCATACATACAACAAAC 57.629 39.130 0.00 0.00 0.00 2.93
3045 3169 4.549793 ACGTGGTGTCATGTTGCA 57.450 50.000 0.00 0.00 39.93 4.08
3061 3185 6.535274 AACAAGATTTAGGTACACGACAAC 57.465 37.500 0.00 0.00 0.00 3.32
3077 3201 5.010012 CACTACCAAGGCAGAAAAACAAGAT 59.990 40.000 0.00 0.00 0.00 2.40
3083 3207 3.892284 TCACACTACCAAGGCAGAAAAA 58.108 40.909 0.00 0.00 0.00 1.94
3095 3219 9.982651 AATATACACTATTGACATCACACTACC 57.017 33.333 0.00 0.00 0.00 3.18
3184 3318 8.980143 AACGAAACATTTTTATTGATAGGGTG 57.020 30.769 0.00 0.00 0.00 4.61
3309 3446 7.550906 AGAGTGATCAAAACTATACTTTGAGGC 59.449 37.037 0.00 6.43 43.89 4.70
3366 3505 7.283807 TCAATATGCAGAAGACATTAGCAACAT 59.716 33.333 0.00 0.00 38.85 2.71
3378 3517 4.476628 TGCTCTGTCAATATGCAGAAGA 57.523 40.909 0.00 0.00 40.68 2.87
3407 3546 4.287067 TCAGAAGTAGAATTCCAACAGGCT 59.713 41.667 0.65 0.00 0.00 4.58
3427 3566 6.429385 AGATTTTGAGCTCTTACAACCTTCAG 59.571 38.462 16.19 0.00 0.00 3.02
3543 3685 1.065926 TCAGGATTGAGATTGCTGCGT 60.066 47.619 0.00 0.00 33.07 5.24
3561 3703 8.423349 ACAAATTTGAATTCTTCATTCCACTCA 58.577 29.630 24.64 0.00 40.80 3.41
3619 3761 5.711976 CCTGTTCCCAGTCAAAGACATTAAT 59.288 40.000 0.00 0.00 36.95 1.40
3622 3764 3.490348 CCTGTTCCCAGTCAAAGACATT 58.510 45.455 0.00 0.00 36.95 2.71
3649 3791 6.603201 ACTTCAGACTTCATGAACAAAGGAAA 59.397 34.615 3.38 0.00 33.28 3.13
3669 3815 6.449698 ACGAATACGAAAAGGAACTACTTCA 58.550 36.000 0.00 0.00 39.22 3.02
3690 3836 7.307751 GCTTAGCTGCATATTATTTGGTAACGA 60.308 37.037 1.02 0.00 42.51 3.85
3733 3887 7.039363 CCCATCTTTTCATGTTTACCAACCTAA 60.039 37.037 0.00 0.00 31.02 2.69
3770 3924 4.152647 GGGGGAAGTTCTTTCAACAGAAT 58.847 43.478 2.25 0.00 37.54 2.40
3809 3963 6.982852 TGGTCTTCAGTAAGTTAAGAGTCAG 58.017 40.000 0.00 0.00 34.13 3.51
3862 4016 5.175859 TCCAAAATAATCTGACCACGAGAC 58.824 41.667 0.00 0.00 0.00 3.36
4165 4430 4.273318 GAGGGAAACTCAAGTGCCATAAT 58.727 43.478 5.12 0.00 45.85 1.28
4179 4444 1.208293 CCTAGTGCAGAGGAGGGAAAC 59.792 57.143 8.68 0.00 35.99 2.78
4184 4449 1.686052 GATCACCTAGTGCAGAGGAGG 59.314 57.143 19.35 10.83 37.53 4.30
4193 4459 5.174395 CCTGTTCTTCTTGATCACCTAGTG 58.826 45.833 0.00 0.00 34.45 2.74
4327 4596 5.725110 TTCTCGTACAGTATCGTACCTTC 57.275 43.478 0.00 0.00 38.85 3.46
4339 4608 3.506067 AGGGCCAAAAATTTCTCGTACAG 59.494 43.478 6.18 0.00 0.00 2.74
4341 4610 4.022676 TCAAGGGCCAAAAATTTCTCGTAC 60.023 41.667 6.18 0.00 0.00 3.67
4345 4614 4.696877 CCAATCAAGGGCCAAAAATTTCTC 59.303 41.667 6.18 0.00 0.00 2.87
4352 4621 1.415659 CACACCAATCAAGGGCCAAAA 59.584 47.619 6.18 0.00 0.00 2.44
4353 4622 1.047002 CACACCAATCAAGGGCCAAA 58.953 50.000 6.18 0.00 0.00 3.28
4363 4637 6.622896 GCTTGTAGTGAATTACCACACCAATC 60.623 42.308 0.00 0.00 39.42 2.67
4431 4709 2.165167 CTGCAATTTTGAGGCTCTCCA 58.835 47.619 16.72 0.00 33.74 3.86
4448 4726 6.498304 TCAAGATCAAAAGAAACTGAACTGC 58.502 36.000 0.00 0.00 0.00 4.40
4474 4798 7.989826 ACATGTCATAAAGAGTTAATCAAGCC 58.010 34.615 0.00 0.00 0.00 4.35
4494 4827 5.195185 TCCATGCATTGTATCAAGACATGT 58.805 37.500 0.00 0.00 33.31 3.21
4513 4846 6.014840 AGCTTGAACAATTTCAGACAATCCAT 60.015 34.615 0.00 0.00 42.79 3.41
4542 4875 8.657074 TGTACCAACATAACATAGTAAGCATC 57.343 34.615 0.00 0.00 0.00 3.91
4543 4876 7.715249 CCTGTACCAACATAACATAGTAAGCAT 59.285 37.037 0.00 0.00 34.37 3.79
4544 4877 7.045416 CCTGTACCAACATAACATAGTAAGCA 58.955 38.462 0.00 0.00 34.37 3.91
4545 4878 7.270047 TCCTGTACCAACATAACATAGTAAGC 58.730 38.462 0.00 0.00 34.37 3.09
4546 4879 9.314321 CTTCCTGTACCAACATAACATAGTAAG 57.686 37.037 0.00 0.00 34.37 2.34
4547 4880 7.767198 GCTTCCTGTACCAACATAACATAGTAA 59.233 37.037 0.00 0.00 34.37 2.24
4548 4881 7.270047 GCTTCCTGTACCAACATAACATAGTA 58.730 38.462 0.00 0.00 34.37 1.82
4549 4882 6.113411 GCTTCCTGTACCAACATAACATAGT 58.887 40.000 0.00 0.00 34.37 2.12
4550 4883 5.527582 GGCTTCCTGTACCAACATAACATAG 59.472 44.000 0.00 0.00 34.37 2.23
4554 4890 3.951663 AGGCTTCCTGTACCAACATAAC 58.048 45.455 0.00 0.00 34.37 1.89
4563 4899 4.320910 GCCCAAGGCTTCCTGTAC 57.679 61.111 0.00 0.00 46.69 2.90
4607 4943 3.308595 CGTTAATCCGCTTGTTGCTGATA 59.691 43.478 0.00 0.00 43.27 2.15
4703 5039 1.938016 GCATTTTGGCACCTTGCTCAG 60.938 52.381 7.30 0.00 44.28 3.35
4724 5060 1.089920 CTGTACCTTGTGATGCCAGC 58.910 55.000 0.00 0.00 0.00 4.85
4787 5132 6.040955 AGAGACGAAGCAATATCTACATGGAA 59.959 38.462 0.00 0.00 0.00 3.53
4822 5174 6.708054 ACAGAAAATCTCGACAAAGATCAAGT 59.292 34.615 0.00 0.00 34.90 3.16
4889 5241 5.174398 GTCGTAATTCTGTTTCTGTTGTCGA 59.826 40.000 0.00 0.00 0.00 4.20
4890 5242 5.175126 AGTCGTAATTCTGTTTCTGTTGTCG 59.825 40.000 0.00 0.00 0.00 4.35
4891 5243 6.526566 AGTCGTAATTCTGTTTCTGTTGTC 57.473 37.500 0.00 0.00 0.00 3.18
4892 5244 6.761714 AGAAGTCGTAATTCTGTTTCTGTTGT 59.238 34.615 0.00 0.00 35.70 3.32
4893 5245 7.178712 AGAAGTCGTAATTCTGTTTCTGTTG 57.821 36.000 0.00 0.00 35.70 3.33
4894 5246 7.787725 AAGAAGTCGTAATTCTGTTTCTGTT 57.212 32.000 0.00 0.00 37.10 3.16
4896 5248 7.584123 CACAAAGAAGTCGTAATTCTGTTTCTG 59.416 37.037 0.00 0.00 37.10 3.02
4897 5249 7.254795 CCACAAAGAAGTCGTAATTCTGTTTCT 60.255 37.037 0.00 0.00 37.10 2.52
4898 5250 6.851330 CCACAAAGAAGTCGTAATTCTGTTTC 59.149 38.462 0.00 0.00 37.10 2.78
4903 5257 5.465724 GTCACCACAAAGAAGTCGTAATTCT 59.534 40.000 0.00 0.00 38.65 2.40
4934 5288 2.965831 AGCATATCTGTAAGGGCGAGAA 59.034 45.455 0.00 0.00 0.00 2.87
4935 5289 2.598565 AGCATATCTGTAAGGGCGAGA 58.401 47.619 0.00 0.00 0.00 4.04
4952 5306 8.637986 ACTTTTAATCTGTTCAAACCATAAGCA 58.362 29.630 0.00 0.00 0.00 3.91
5001 5355 1.138661 CCCTGGTGTTTTGTGCAATGT 59.861 47.619 0.00 0.00 0.00 2.71
5024 5411 4.081476 ACTTGCTGTGCACTATAGATGTCA 60.081 41.667 19.41 0.00 38.71 3.58
5025 5412 4.269603 CACTTGCTGTGCACTATAGATGTC 59.730 45.833 19.41 0.00 38.71 3.06
5026 5413 4.186926 CACTTGCTGTGCACTATAGATGT 58.813 43.478 19.41 5.62 38.71 3.06
5027 5414 3.558829 CCACTTGCTGTGCACTATAGATG 59.441 47.826 19.41 9.70 44.92 2.90
5028 5415 3.198635 ACCACTTGCTGTGCACTATAGAT 59.801 43.478 19.41 0.00 44.92 1.98
5029 5416 2.567169 ACCACTTGCTGTGCACTATAGA 59.433 45.455 19.41 0.00 44.92 1.98
5030 5417 2.977914 ACCACTTGCTGTGCACTATAG 58.022 47.619 19.41 8.41 44.92 1.31
5031 5418 3.259625 TGTACCACTTGCTGTGCACTATA 59.740 43.478 19.41 0.59 44.92 1.31
5033 5420 1.414550 TGTACCACTTGCTGTGCACTA 59.585 47.619 19.41 3.54 44.92 2.74
5034 5421 0.180171 TGTACCACTTGCTGTGCACT 59.820 50.000 19.41 0.00 44.92 4.40
5035 5422 1.021202 TTGTACCACTTGCTGTGCAC 58.979 50.000 10.75 10.75 44.92 4.57
5044 5431 0.817634 TGCTGCGCTTTGTACCACTT 60.818 50.000 9.73 0.00 0.00 3.16
5059 5446 0.030504 TTCCAAACGTGCATGTGCTG 59.969 50.000 13.39 12.81 42.66 4.41
5061 5448 2.627863 TATTCCAAACGTGCATGTGC 57.372 45.000 13.39 0.00 42.50 4.57
5062 5449 4.345288 CAGATATTCCAAACGTGCATGTG 58.655 43.478 13.39 0.41 0.00 3.21
5063 5450 3.378112 CCAGATATTCCAAACGTGCATGT 59.622 43.478 5.51 5.51 0.00 3.21
5064 5451 3.378112 ACCAGATATTCCAAACGTGCATG 59.622 43.478 3.82 3.82 0.00 4.06
5066 5453 2.746904 CACCAGATATTCCAAACGTGCA 59.253 45.455 0.00 0.00 0.00 4.57
5070 5457 3.930229 TCGAACACCAGATATTCCAAACG 59.070 43.478 0.00 0.00 0.00 3.60
5072 5459 3.930229 CGTCGAACACCAGATATTCCAAA 59.070 43.478 0.00 0.00 0.00 3.28
5076 5463 2.535984 CTGCGTCGAACACCAGATATTC 59.464 50.000 0.00 0.00 0.00 1.75
5077 5464 2.165641 TCTGCGTCGAACACCAGATATT 59.834 45.455 0.00 0.00 31.20 1.28
5102 5489 2.044135 GCACAGAAAAACAGCGTTAGC 58.956 47.619 0.00 0.00 45.58 3.09
5103 5490 3.332761 TGCACAGAAAAACAGCGTTAG 57.667 42.857 0.00 0.00 0.00 2.34
5106 5493 2.869233 ATTGCACAGAAAAACAGCGT 57.131 40.000 0.00 0.00 0.00 5.07
5108 5495 4.093261 ACACAAATTGCACAGAAAAACAGC 59.907 37.500 0.00 0.00 0.00 4.40
5114 5501 9.039870 CCTAAATTTACACAAATTGCACAGAAA 57.960 29.630 0.00 0.00 42.29 2.52
5118 5505 6.703607 CCACCTAAATTTACACAAATTGCACA 59.296 34.615 0.00 0.00 42.29 4.57
5119 5506 6.347321 GCCACCTAAATTTACACAAATTGCAC 60.347 38.462 0.00 0.00 42.29 4.57
5127 5514 1.465387 CGCGCCACCTAAATTTACACA 59.535 47.619 0.00 0.00 0.00 3.72
5132 5519 1.199097 CAGTTCGCGCCACCTAAATTT 59.801 47.619 0.00 0.00 0.00 1.82
5137 5524 2.571757 CTCAGTTCGCGCCACCTA 59.428 61.111 0.00 0.00 0.00 3.08
5142 5529 0.461339 TAAATCCCTCAGTTCGCGCC 60.461 55.000 0.00 0.00 0.00 6.53
5144 5531 4.369182 AGTATTAAATCCCTCAGTTCGCG 58.631 43.478 0.00 0.00 0.00 5.87
5154 5541 8.826765 TCCATCCTCAGATTAGTATTAAATCCC 58.173 37.037 0.00 0.00 34.50 3.85
5181 5571 5.178096 TCTGAGAATTTGGGCAGATGTAA 57.822 39.130 0.00 0.00 32.85 2.41
5182 5572 4.842531 TCTGAGAATTTGGGCAGATGTA 57.157 40.909 0.00 0.00 32.85 2.29
5219 5609 4.563140 ACGGCCTAGAATTCAACCTTTA 57.437 40.909 8.44 0.00 0.00 1.85
5220 5610 3.434940 ACGGCCTAGAATTCAACCTTT 57.565 42.857 8.44 0.00 0.00 3.11
5221 5611 3.434940 AACGGCCTAGAATTCAACCTT 57.565 42.857 8.44 0.00 0.00 3.50
5222 5612 3.081804 CAAACGGCCTAGAATTCAACCT 58.918 45.455 8.44 0.00 0.00 3.50
5223 5613 2.817844 ACAAACGGCCTAGAATTCAACC 59.182 45.455 8.44 2.32 0.00 3.77
5224 5614 3.500680 TGACAAACGGCCTAGAATTCAAC 59.499 43.478 8.44 0.00 0.00 3.18
5225 5615 3.745799 TGACAAACGGCCTAGAATTCAA 58.254 40.909 8.44 0.00 0.00 2.69
5226 5616 3.334691 CTGACAAACGGCCTAGAATTCA 58.665 45.455 8.44 0.00 0.00 2.57
5227 5617 2.096013 GCTGACAAACGGCCTAGAATTC 59.904 50.000 0.00 0.00 44.40 2.17
5228 5618 2.084546 GCTGACAAACGGCCTAGAATT 58.915 47.619 0.00 0.00 44.40 2.17
5229 5619 1.739067 GCTGACAAACGGCCTAGAAT 58.261 50.000 0.00 0.00 44.40 2.40
5237 5627 1.939934 TCTGAACTTGCTGACAAACGG 59.060 47.619 0.00 0.00 34.74 4.44
5238 5628 3.885484 ATCTGAACTTGCTGACAAACG 57.115 42.857 0.00 0.00 34.74 3.60
5239 5629 6.060028 TGTAATCTGAACTTGCTGACAAAC 57.940 37.500 0.00 0.00 34.74 2.93
5240 5630 6.882610 ATGTAATCTGAACTTGCTGACAAA 57.117 33.333 0.00 0.00 34.74 2.83
5241 5631 6.486253 GATGTAATCTGAACTTGCTGACAA 57.514 37.500 0.00 0.00 41.17 3.18
5256 5646 5.221461 ACCCTATCGAACACCAGATGTAATC 60.221 44.000 0.00 0.00 42.31 1.75
5257 5647 4.654262 ACCCTATCGAACACCAGATGTAAT 59.346 41.667 0.00 0.00 42.31 1.89
5258 5648 4.028131 ACCCTATCGAACACCAGATGTAA 58.972 43.478 0.00 0.00 42.31 2.41
5259 5649 3.638860 ACCCTATCGAACACCAGATGTA 58.361 45.455 0.00 0.00 42.31 2.29
5260 5650 2.467880 ACCCTATCGAACACCAGATGT 58.532 47.619 0.00 0.00 46.42 3.06
5261 5651 3.543680 AACCCTATCGAACACCAGATG 57.456 47.619 0.00 0.00 0.00 2.90
5262 5652 5.396436 CCTTTAACCCTATCGAACACCAGAT 60.396 44.000 0.00 0.00 0.00 2.90
5263 5653 4.081309 CCTTTAACCCTATCGAACACCAGA 60.081 45.833 0.00 0.00 0.00 3.86
5264 5654 4.189231 CCTTTAACCCTATCGAACACCAG 58.811 47.826 0.00 0.00 0.00 4.00
5265 5655 3.583966 ACCTTTAACCCTATCGAACACCA 59.416 43.478 0.00 0.00 0.00 4.17
5266 5656 4.212143 ACCTTTAACCCTATCGAACACC 57.788 45.455 0.00 0.00 0.00 4.16
5267 5657 6.564709 AAAACCTTTAACCCTATCGAACAC 57.435 37.500 0.00 0.00 0.00 3.32
5268 5658 6.207221 GGAAAAACCTTTAACCCTATCGAACA 59.793 38.462 0.00 0.00 35.41 3.18
5269 5659 6.207221 TGGAAAAACCTTTAACCCTATCGAAC 59.793 38.462 0.00 0.00 39.86 3.95
5270 5660 6.305411 TGGAAAAACCTTTAACCCTATCGAA 58.695 36.000 0.00 0.00 39.86 3.71
5271 5661 5.878627 TGGAAAAACCTTTAACCCTATCGA 58.121 37.500 0.00 0.00 39.86 3.59
5272 5662 6.384224 GTTGGAAAAACCTTTAACCCTATCG 58.616 40.000 0.00 0.00 39.86 2.92
5273 5663 6.016024 ACGTTGGAAAAACCTTTAACCCTATC 60.016 38.462 0.00 0.00 39.86 2.08
5274 5664 5.834742 ACGTTGGAAAAACCTTTAACCCTAT 59.165 36.000 0.00 0.00 39.86 2.57
5275 5665 5.067544 CACGTTGGAAAAACCTTTAACCCTA 59.932 40.000 0.00 0.00 39.86 3.53
5276 5666 4.025360 ACGTTGGAAAAACCTTTAACCCT 58.975 39.130 0.00 0.00 39.86 4.34
5277 5667 4.114073 CACGTTGGAAAAACCTTTAACCC 58.886 43.478 0.00 0.00 39.86 4.11
5278 5668 3.552699 GCACGTTGGAAAAACCTTTAACC 59.447 43.478 0.00 0.00 39.86 2.85
5279 5669 3.552699 GGCACGTTGGAAAAACCTTTAAC 59.447 43.478 0.00 0.00 39.86 2.01
5280 5670 3.430513 GGGCACGTTGGAAAAACCTTTAA 60.431 43.478 0.00 0.00 39.86 1.52
5281 5671 2.101082 GGGCACGTTGGAAAAACCTTTA 59.899 45.455 0.00 0.00 39.86 1.85
5282 5672 1.134640 GGGCACGTTGGAAAAACCTTT 60.135 47.619 0.00 0.00 39.86 3.11
5294 5684 3.673484 GCAGCATGTGGGCACGTT 61.673 61.111 0.00 0.00 39.31 3.99
5310 5700 2.758736 ACTGATGAGAACTCTGTGGC 57.241 50.000 3.51 0.00 0.00 5.01
5315 5705 5.087323 TGGGAAACTACTGATGAGAACTCT 58.913 41.667 3.51 0.00 0.00 3.24
5326 5720 2.568623 ACCTGCTTGGGAAACTACTG 57.431 50.000 1.69 0.00 41.11 2.74
5347 5741 6.591935 ACTTGATGGAGAAACTACTGTTGAA 58.408 36.000 0.00 0.00 36.39 2.69
5351 5745 4.593206 TGGACTTGATGGAGAAACTACTGT 59.407 41.667 0.00 0.00 0.00 3.55
5366 5760 5.431765 GCCTAGAATTCAATCTGGACTTGA 58.568 41.667 8.44 0.00 30.04 3.02
5369 5763 3.181461 CGGCCTAGAATTCAATCTGGACT 60.181 47.826 8.44 0.00 30.04 3.85
5405 5799 1.417890 ACGGCCTAGAATCCAATCTGG 59.582 52.381 0.00 0.00 39.43 3.86
5406 5800 2.918712 ACGGCCTAGAATCCAATCTG 57.081 50.000 0.00 0.00 0.00 2.90
5407 5801 3.054361 ACAAACGGCCTAGAATCCAATCT 60.054 43.478 0.00 0.00 0.00 2.40
5408 5802 3.279434 ACAAACGGCCTAGAATCCAATC 58.721 45.455 0.00 0.00 0.00 2.67
5409 5803 3.366052 ACAAACGGCCTAGAATCCAAT 57.634 42.857 0.00 0.00 0.00 3.16
5410 5804 2.871096 ACAAACGGCCTAGAATCCAA 57.129 45.000 0.00 0.00 0.00 3.53
5411 5805 2.871096 AACAAACGGCCTAGAATCCA 57.129 45.000 0.00 0.00 0.00 3.41
5412 5806 3.621715 CACTAACAAACGGCCTAGAATCC 59.378 47.826 0.00 0.00 0.00 3.01
5413 5807 3.621715 CCACTAACAAACGGCCTAGAATC 59.378 47.826 0.00 0.00 0.00 2.52
5414 5808 3.262405 TCCACTAACAAACGGCCTAGAAT 59.738 43.478 0.00 0.00 0.00 2.40
5415 5809 2.633967 TCCACTAACAAACGGCCTAGAA 59.366 45.455 0.00 0.00 0.00 2.10
5416 5810 2.250031 TCCACTAACAAACGGCCTAGA 58.750 47.619 0.00 0.00 0.00 2.43
5417 5811 2.754946 TCCACTAACAAACGGCCTAG 57.245 50.000 0.00 0.00 0.00 3.02
5418 5812 2.289819 CCTTCCACTAACAAACGGCCTA 60.290 50.000 0.00 0.00 0.00 3.93
5419 5813 1.544759 CCTTCCACTAACAAACGGCCT 60.545 52.381 0.00 0.00 0.00 5.19
5420 5814 0.879090 CCTTCCACTAACAAACGGCC 59.121 55.000 0.00 0.00 0.00 6.13
5421 5815 0.879090 CCCTTCCACTAACAAACGGC 59.121 55.000 0.00 0.00 0.00 5.68
5422 5816 1.530323 CCCCTTCCACTAACAAACGG 58.470 55.000 0.00 0.00 0.00 4.44
5423 5817 0.879090 GCCCCTTCCACTAACAAACG 59.121 55.000 0.00 0.00 0.00 3.60
5424 5818 1.989706 TGCCCCTTCCACTAACAAAC 58.010 50.000 0.00 0.00 0.00 2.93
5425 5819 2.990740 ATGCCCCTTCCACTAACAAA 57.009 45.000 0.00 0.00 0.00 2.83
5426 5820 2.990740 AATGCCCCTTCCACTAACAA 57.009 45.000 0.00 0.00 0.00 2.83
5427 5821 2.378547 AGAAATGCCCCTTCCACTAACA 59.621 45.455 0.00 0.00 0.00 2.41
5428 5822 2.755103 CAGAAATGCCCCTTCCACTAAC 59.245 50.000 0.00 0.00 0.00 2.34
5429 5823 2.378547 ACAGAAATGCCCCTTCCACTAA 59.621 45.455 0.00 0.00 0.00 2.24
5430 5824 1.992557 ACAGAAATGCCCCTTCCACTA 59.007 47.619 0.00 0.00 0.00 2.74
5431 5825 0.779997 ACAGAAATGCCCCTTCCACT 59.220 50.000 0.00 0.00 0.00 4.00
5432 5826 1.177401 GACAGAAATGCCCCTTCCAC 58.823 55.000 0.00 0.00 0.00 4.02
5433 5827 0.776810 TGACAGAAATGCCCCTTCCA 59.223 50.000 0.00 0.00 0.00 3.53
5441 5835 3.015934 TGTGCAACATGACAGAAATGC 57.984 42.857 0.00 0.00 45.67 3.56
5472 5866 7.880195 TGTGAGAAATCCTCCTAAAGAAAAGAG 59.120 37.037 0.00 0.00 41.25 2.85
5512 5906 2.096909 CGTCCTTCACAACTTACGCTTG 60.097 50.000 0.00 0.00 0.00 4.01
5515 5909 0.788391 CCGTCCTTCACAACTTACGC 59.212 55.000 0.00 0.00 0.00 4.42
5518 5912 3.823281 TTGACCGTCCTTCACAACTTA 57.177 42.857 0.00 0.00 0.00 2.24
5523 5917 3.138304 CTCAATTTGACCGTCCTTCACA 58.862 45.455 0.00 0.00 0.00 3.58
5524 5918 2.095718 GCTCAATTTGACCGTCCTTCAC 60.096 50.000 0.00 0.00 0.00 3.18
5526 5920 2.151202 TGCTCAATTTGACCGTCCTTC 58.849 47.619 0.00 0.00 0.00 3.46
5532 5926 2.098117 GGGAAGATGCTCAATTTGACCG 59.902 50.000 0.00 0.00 0.00 4.79
5536 5930 2.159142 GGCTGGGAAGATGCTCAATTTG 60.159 50.000 0.00 0.00 0.00 2.32
5546 5940 1.333636 CGTGAGAGGGCTGGGAAGAT 61.334 60.000 0.00 0.00 0.00 2.40
5548 5942 2.581354 CGTGAGAGGGCTGGGAAG 59.419 66.667 0.00 0.00 0.00 3.46
5566 5960 1.401905 GGCGGCTAGAAAGTTTGATGG 59.598 52.381 0.00 0.00 0.00 3.51
5573 5967 2.789409 AAATCAGGCGGCTAGAAAGT 57.211 45.000 12.74 0.00 0.00 2.66
5585 5979 5.823045 AGGAAAATTAGGACGCTAAATCAGG 59.177 40.000 0.00 0.00 0.00 3.86
5593 5987 2.677037 CGGACAGGAAAATTAGGACGCT 60.677 50.000 0.00 0.00 0.00 5.07
5598 5992 3.343941 TGGACGGACAGGAAAATTAGG 57.656 47.619 0.00 0.00 0.00 2.69
5633 6027 0.729116 GCCATCACACGGACAGAATG 59.271 55.000 0.00 0.00 46.00 2.67
5634 6028 0.615331 AGCCATCACACGGACAGAAT 59.385 50.000 0.00 0.00 0.00 2.40
5635 6029 0.396435 AAGCCATCACACGGACAGAA 59.604 50.000 0.00 0.00 0.00 3.02
5636 6030 0.037326 GAAGCCATCACACGGACAGA 60.037 55.000 0.00 0.00 0.00 3.41
5637 6031 1.021390 GGAAGCCATCACACGGACAG 61.021 60.000 0.00 0.00 0.00 3.51
5638 6032 1.003839 GGAAGCCATCACACGGACA 60.004 57.895 0.00 0.00 0.00 4.02
5639 6033 0.741221 GAGGAAGCCATCACACGGAC 60.741 60.000 0.00 0.00 0.00 4.79
5640 6034 1.191489 TGAGGAAGCCATCACACGGA 61.191 55.000 0.00 0.00 0.00 4.69
5641 6035 0.107508 ATGAGGAAGCCATCACACGG 60.108 55.000 0.00 0.00 0.00 4.94
5642 6036 1.293924 GATGAGGAAGCCATCACACG 58.706 55.000 0.00 0.00 39.98 4.49
5643 6037 1.211457 AGGATGAGGAAGCCATCACAC 59.789 52.381 0.00 0.00 41.52 3.82
5644 6038 1.211212 CAGGATGAGGAAGCCATCACA 59.789 52.381 0.00 0.00 41.52 3.58
5645 6039 1.211457 ACAGGATGAGGAAGCCATCAC 59.789 52.381 0.00 0.00 41.52 3.06
5646 6040 1.211212 CACAGGATGAGGAAGCCATCA 59.789 52.381 0.00 0.00 41.52 3.07
5647 6041 1.487976 TCACAGGATGAGGAAGCCATC 59.512 52.381 0.00 0.00 39.69 3.51
5648 6042 1.588239 TCACAGGATGAGGAAGCCAT 58.412 50.000 0.00 0.00 39.69 4.40
5649 6043 1.588239 ATCACAGGATGAGGAAGCCA 58.412 50.000 0.00 0.00 41.91 4.75
5650 6044 2.725221 AATCACAGGATGAGGAAGCC 57.275 50.000 0.00 0.00 41.91 4.35
5651 6045 4.517285 TGTTAATCACAGGATGAGGAAGC 58.483 43.478 0.00 0.00 41.91 3.86
5663 6057 9.549078 TGTATAAAGTGTTGACTGTTAATCACA 57.451 29.630 15.00 0.00 30.61 3.58
5667 6061 9.840427 GCATTGTATAAAGTGTTGACTGTTAAT 57.160 29.630 0.00 0.00 30.61 1.40
5668 6062 8.841300 TGCATTGTATAAAGTGTTGACTGTTAA 58.159 29.630 0.00 0.00 30.61 2.01
5669 6063 8.384607 TGCATTGTATAAAGTGTTGACTGTTA 57.615 30.769 0.00 0.00 30.61 2.41
5670 6064 7.270757 TGCATTGTATAAAGTGTTGACTGTT 57.729 32.000 0.00 0.00 30.61 3.16
5671 6065 6.875948 TGCATTGTATAAAGTGTTGACTGT 57.124 33.333 0.00 0.00 30.61 3.55
5672 6066 8.572828 TTTTGCATTGTATAAAGTGTTGACTG 57.427 30.769 0.00 0.00 30.61 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.