Multiple sequence alignment - TraesCS5A01G329700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G329700 chr5A 100.000 3261 0 0 1 3261 538759491 538756231 0.000000e+00 6023.0
1 TraesCS5A01G329700 chr5A 91.155 1481 122 5 826 2298 538583582 538582103 0.000000e+00 2001.0
2 TraesCS5A01G329700 chr5A 95.349 43 2 0 3219 3261 556945052 556945010 5.840000e-08 69.4
3 TraesCS5A01G329700 chr5A 100.000 35 0 0 3227 3261 107443744 107443710 7.550000e-07 65.8
4 TraesCS5A01G329700 chrUn 91.709 1954 131 12 874 2799 303983037 303981087 0.000000e+00 2682.0
5 TraesCS5A01G329700 chrUn 91.748 1951 130 12 874 2796 356552694 356554641 0.000000e+00 2682.0
6 TraesCS5A01G329700 chr5D 92.298 1662 108 14 874 2524 424781485 424779833 0.000000e+00 2342.0
7 TraesCS5A01G329700 chr5D 91.952 1429 105 7 718 2140 424664347 424662923 0.000000e+00 1993.0
8 TraesCS5A01G329700 chr5D 87.739 522 58 5 3 522 424665182 424664665 3.600000e-169 604.0
9 TraesCS5A01G329700 chr5D 94.580 369 18 2 2863 3230 351633855 351633488 1.310000e-158 569.0
10 TraesCS5A01G329700 chr5D 89.362 188 16 3 525 712 424781838 424781655 1.960000e-57 233.0
11 TraesCS5A01G329700 chr5D 89.785 186 11 6 532 712 424664567 424664385 7.040000e-57 231.0
12 TraesCS5A01G329700 chr5D 84.925 199 21 3 2184 2382 424662927 424662738 3.320000e-45 193.0
13 TraesCS5A01G329700 chr5D 87.069 116 8 4 2668 2780 60535080 60535191 1.230000e-24 124.0
14 TraesCS5A01G329700 chr5B 90.327 1437 119 13 718 2140 513737106 513735676 0.000000e+00 1866.0
15 TraesCS5A01G329700 chr5B 89.080 522 51 5 3 522 513737950 513737433 0.000000e+00 643.0
16 TraesCS5A01G329700 chr5B 94.595 370 18 2 2863 3230 472694807 472695176 3.650000e-159 571.0
17 TraesCS5A01G329700 chr5B 83.080 461 58 15 2397 2851 572579498 572579944 5.070000e-108 401.0
18 TraesCS5A01G329700 chr5B 87.565 193 10 7 532 712 513737335 513737145 9.170000e-51 211.0
19 TraesCS5A01G329700 chr6A 94.737 380 17 2 2852 3230 531931056 531930679 3.620000e-164 588.0
20 TraesCS5A01G329700 chr6A 87.352 253 29 3 2397 2648 541426214 541425964 1.480000e-73 287.0
21 TraesCS5A01G329700 chr7D 95.082 366 16 2 2863 3227 390481577 390481941 2.820000e-160 575.0
22 TraesCS5A01G329700 chr3D 94.851 369 18 1 2863 3230 131937888 131938256 2.820000e-160 575.0
23 TraesCS5A01G329700 chr1B 94.851 369 16 2 2863 3230 585509887 585509521 1.010000e-159 573.0
24 TraesCS5A01G329700 chr1B 89.796 343 33 2 2474 2816 520082848 520083188 3.860000e-119 438.0
25 TraesCS5A01G329700 chr1B 83.673 441 53 11 2397 2822 62715623 62716059 6.560000e-107 398.0
26 TraesCS5A01G329700 chr3B 94.851 369 11 4 2863 3230 728586659 728586298 1.310000e-158 569.0
27 TraesCS5A01G329700 chr7B 94.580 369 17 2 2863 3230 380253002 380252636 4.720000e-158 568.0
28 TraesCS5A01G329700 chr6D 94.580 369 14 4 2863 3230 425934772 425934409 1.700000e-157 566.0
29 TraesCS5A01G329700 chr1D 84.599 461 54 11 2396 2851 354771384 354770936 2.990000e-120 442.0
30 TraesCS5A01G329700 chr1A 83.370 457 53 15 2396 2845 338601401 338601841 5.070000e-108 401.0
31 TraesCS5A01G329700 chr1A 88.411 302 32 3 2396 2697 442477992 442477694 8.600000e-96 361.0
32 TraesCS5A01G329700 chr1A 100.000 37 0 0 3225 3261 369371635 369371671 5.840000e-08 69.4
33 TraesCS5A01G329700 chr1A 93.023 43 2 1 3220 3261 535457377 535457419 9.770000e-06 62.1
34 TraesCS5A01G329700 chr3A 84.211 380 49 4 2852 3229 694509746 694509376 3.090000e-95 359.0
35 TraesCS5A01G329700 chr3A 100.000 36 0 0 3226 3261 627868358 627868393 2.100000e-07 67.6
36 TraesCS5A01G329700 chr4A 79.226 491 54 31 2377 2852 106898196 106898653 6.840000e-77 298.0
37 TraesCS5A01G329700 chr4A 100.000 38 0 0 3224 3261 442822775 442822812 1.620000e-08 71.3
38 TraesCS5A01G329700 chr4A 100.000 34 0 0 3228 3261 31243459 31243426 2.720000e-06 63.9
39 TraesCS5A01G329700 chr2A 97.368 38 1 0 3224 3261 393561967 393561930 7.550000e-07 65.8
40 TraesCS5A01G329700 chr2A 93.333 45 0 3 3217 3261 122238836 122238877 2.720000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G329700 chr5A 538756231 538759491 3260 True 6023.000000 6023 100.000000 1 3261 1 chr5A.!!$R3 3260
1 TraesCS5A01G329700 chr5A 538582103 538583582 1479 True 2001.000000 2001 91.155000 826 2298 1 chr5A.!!$R2 1472
2 TraesCS5A01G329700 chrUn 303981087 303983037 1950 True 2682.000000 2682 91.709000 874 2799 1 chrUn.!!$R1 1925
3 TraesCS5A01G329700 chrUn 356552694 356554641 1947 False 2682.000000 2682 91.748000 874 2796 1 chrUn.!!$F1 1922
4 TraesCS5A01G329700 chr5D 424779833 424781838 2005 True 1287.500000 2342 90.830000 525 2524 2 chr5D.!!$R3 1999
5 TraesCS5A01G329700 chr5D 424662738 424665182 2444 True 755.250000 1993 88.600250 3 2382 4 chr5D.!!$R2 2379
6 TraesCS5A01G329700 chr5B 513735676 513737950 2274 True 906.666667 1866 88.990667 3 2140 3 chr5B.!!$R1 2137

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
712 813 0.793617 TCCAAGGAGGAAGGAGAGGT 59.206 55.0 0.00 0.0 45.65 3.85 F
1242 1382 0.032952 GCACGGGCATCTCGGTAATA 59.967 55.0 3.77 0.0 40.72 0.98 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2071 2211 0.111134 CATTGTGTGTGTGCTCGTCG 60.111 55.0 0.0 0.0 0.0 5.12 R
3220 3455 0.034477 ATGCCCTTTCACCCGGTTAG 60.034 55.0 0.0 0.0 0.0 2.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 2.608988 CCACAGGGCAGAGGGTCT 60.609 66.667 0.00 0.00 0.00 3.85
42 43 1.306141 CCACAGGGCAGAGGGTCTA 60.306 63.158 0.00 0.00 0.00 2.59
71 72 2.756760 GGCAGGTTGATGTTGATCATGT 59.243 45.455 0.00 0.00 38.43 3.21
72 73 3.194116 GGCAGGTTGATGTTGATCATGTT 59.806 43.478 0.00 0.00 38.43 2.71
123 124 2.158559 AGTTGCATGTCGTTATTGGCA 58.841 42.857 0.00 0.00 0.00 4.92
130 131 2.520069 TGTCGTTATTGGCATTGGGTT 58.480 42.857 0.00 0.00 0.00 4.11
146 147 3.558033 TGGGTTTGTTTTGAGGTAGTCC 58.442 45.455 0.00 0.00 0.00 3.85
168 169 3.181485 CGACCCCTCATGTACTTCTTCTC 60.181 52.174 0.00 0.00 0.00 2.87
170 171 2.761208 CCCCTCATGTACTTCTTCTCGT 59.239 50.000 0.00 0.00 0.00 4.18
186 187 1.300620 CGTCGACAAGTTGGAGGCA 60.301 57.895 17.16 0.00 0.00 4.75
241 242 2.933769 GGAATGAACTTTCCGCTGTTG 58.066 47.619 4.23 0.00 36.12 3.33
248 249 1.308998 CTTTCCGCTGTTGTGTTCCT 58.691 50.000 0.00 0.00 0.00 3.36
250 251 2.163818 TTCCGCTGTTGTGTTCCTAG 57.836 50.000 0.00 0.00 0.00 3.02
263 264 0.810031 TTCCTAGCGCGGCAAGATTC 60.810 55.000 8.83 0.00 0.00 2.52
275 276 1.961435 GCAAGATTCTTGGCCATGGGA 60.961 52.381 24.09 8.91 0.00 4.37
280 281 2.852714 TTCTTGGCCATGGGATCAAT 57.147 45.000 15.13 0.00 0.00 2.57
312 313 4.948576 TTGCATTCACGCAAGCAG 57.051 50.000 0.00 0.00 46.61 4.24
368 370 1.463444 GCAAACTAACCACTAGGCACG 59.537 52.381 0.00 0.00 39.06 5.34
378 380 4.365723 ACCACTAGGCACGTTAATATTCG 58.634 43.478 0.00 0.00 39.06 3.34
389 391 6.018507 GCACGTTAATATTCGGTTATCACCTT 60.019 38.462 0.00 0.00 41.64 3.50
392 394 9.768662 ACGTTAATATTCGGTTATCACCTTTAT 57.231 29.630 0.00 0.00 41.64 1.40
405 407 8.682710 GTTATCACCTTTATCTTTGTATTGGCA 58.317 33.333 0.00 0.00 0.00 4.92
409 411 7.121168 TCACCTTTATCTTTGTATTGGCAAGAG 59.879 37.037 5.96 0.00 0.00 2.85
426 428 9.466497 TTGGCAAGAGATTCATAACTAGATTTT 57.534 29.630 0.00 0.00 0.00 1.82
476 479 4.566004 TGGACTCTAAAGTTGTCATTCCG 58.434 43.478 0.00 0.00 35.28 4.30
477 480 4.282449 TGGACTCTAAAGTTGTCATTCCGA 59.718 41.667 0.00 0.00 35.28 4.55
493 496 6.984474 GTCATTCCGAGATTATTGTACTTGGA 59.016 38.462 0.00 0.00 40.97 3.53
515 518 6.127758 TGGAATCGAATTGATACCAAAGTTGG 60.128 38.462 8.57 8.57 45.01 3.77
528 531 5.567138 CCAAAGTTGGCACTATAGGAAAG 57.433 43.478 4.43 0.00 42.21 2.62
529 532 5.253330 CCAAAGTTGGCACTATAGGAAAGA 58.747 41.667 4.43 0.00 42.21 2.52
530 533 5.355350 CCAAAGTTGGCACTATAGGAAAGAG 59.645 44.000 4.43 0.00 42.21 2.85
563 654 3.441572 AGGATCTCATCAAAACAAAGCCG 59.558 43.478 0.00 0.00 0.00 5.52
589 680 5.594317 GCCAACCATTGAAGACCTATTGTAT 59.406 40.000 0.00 0.00 0.00 2.29
644 745 2.334971 TTTTGTCACATCTGCATGCG 57.665 45.000 14.09 8.20 32.57 4.73
712 813 0.793617 TCCAAGGAGGAAGGAGAGGT 59.206 55.000 0.00 0.00 45.65 3.85
713 814 0.908198 CCAAGGAGGAAGGAGAGGTG 59.092 60.000 0.00 0.00 41.22 4.00
715 816 1.261238 AAGGAGGAAGGAGAGGTGCG 61.261 60.000 0.00 0.00 0.00 5.34
716 817 2.726351 GGAGGAAGGAGAGGTGCGG 61.726 68.421 0.00 0.00 0.00 5.69
741 875 2.032808 GCTCGCGTAAGATTCCATTTCC 60.033 50.000 5.77 0.00 43.02 3.13
747 881 1.007607 AAGATTCCATTTCCGGGGGT 58.992 50.000 0.00 0.00 0.00 4.95
755 889 0.999712 ATTTCCGGGGGTGACATCTT 59.000 50.000 0.00 0.00 0.00 2.40
756 890 1.659022 TTTCCGGGGGTGACATCTTA 58.341 50.000 0.00 0.00 0.00 2.10
757 891 1.659022 TTCCGGGGGTGACATCTTAA 58.341 50.000 0.00 0.00 0.00 1.85
758 892 1.887797 TCCGGGGGTGACATCTTAAT 58.112 50.000 0.00 0.00 0.00 1.40
906 1045 6.566914 AGCTAGCTATAATTAGAGGGTCCTT 58.433 40.000 17.69 0.00 0.00 3.36
923 1063 5.163447 GGGTCCTTAACAATAGCCCAAAATC 60.163 44.000 0.00 0.00 34.95 2.17
955 1095 4.141711 GCACCTCTCATCACCACCTATTTA 60.142 45.833 0.00 0.00 0.00 1.40
1081 1221 1.742900 CGTCATAGCACCGTTCAGCG 61.743 60.000 0.00 0.00 40.95 5.18
1104 1244 0.169672 CGATCGGTGTCAACTACGGT 59.830 55.000 7.38 0.00 0.00 4.83
1110 1250 2.353011 CGGTGTCAACTACGGTACCAAT 60.353 50.000 13.54 1.32 0.00 3.16
1159 1299 2.264480 CGGCATTCCTCGTGACCA 59.736 61.111 0.00 0.00 0.00 4.02
1160 1300 1.375396 CGGCATTCCTCGTGACCAA 60.375 57.895 0.00 0.00 0.00 3.67
1242 1382 0.032952 GCACGGGCATCTCGGTAATA 59.967 55.000 3.77 0.00 40.72 0.98
1333 1473 1.533273 ATCGCGCCATACTACCCCT 60.533 57.895 0.00 0.00 0.00 4.79
1381 1521 1.735700 GCAACGAGATCATGGACACGA 60.736 52.381 13.79 0.00 0.00 4.35
1459 1599 2.048597 TCACGGCTGGCTACAACG 60.049 61.111 0.00 0.00 34.44 4.10
1511 1651 0.639392 ATCCTGGTAGACTCCCAGCT 59.361 55.000 8.57 0.00 46.73 4.24
1626 1766 3.324268 TGAACATGTACCCGTACTTTGGA 59.676 43.478 0.00 0.00 37.00 3.53
1811 1951 3.387947 CGGGTGGCCGACTAAGGT 61.388 66.667 0.00 0.00 34.88 3.50
1870 2010 6.708054 GGCAGCTGAGTACAACAAATATATCT 59.292 38.462 20.43 0.00 0.00 1.98
1941 2081 4.918037 AGTTCGAGACGTACATATTCACC 58.082 43.478 0.00 0.00 29.93 4.02
1962 2102 3.386768 CTCTTCAACGAGGACCTCAAA 57.613 47.619 21.49 8.53 0.00 2.69
2002 2142 2.747446 CGAAATTTCGGGATGTTCCAGT 59.253 45.455 28.73 0.00 46.30 4.00
2044 2184 5.925506 TGACATTGGCATCATGAAAGATT 57.074 34.783 0.00 0.00 0.00 2.40
2071 2211 4.067016 CGTACACGCGTTGCCCAC 62.067 66.667 10.22 1.95 0.00 4.61
2110 2270 1.459592 GCAAGTTATTCTGACGCACGT 59.540 47.619 0.00 0.00 0.00 4.49
2138 2298 4.502645 GTGTAATGCAGGTCAAAACAACAC 59.497 41.667 0.00 0.00 0.00 3.32
2140 2300 1.550327 TGCAGGTCAAAACAACACCA 58.450 45.000 0.00 0.00 31.99 4.17
2180 2340 3.081133 CGACATCGCCGAAAGTGG 58.919 61.111 0.12 0.00 0.00 4.00
2305 2513 2.365293 AGGCAACAAATCCTTGACCAAC 59.635 45.455 0.00 0.00 41.41 3.77
2318 2526 0.535335 GACCAACGACAGGATGCCTA 59.465 55.000 0.00 0.00 42.53 3.93
2327 2536 2.980233 GGATGCCTATGCGTGCCC 60.980 66.667 0.00 0.00 38.77 5.36
2382 2591 4.282449 TCTCGGATTTTGACAGGACACTTA 59.718 41.667 0.00 0.00 0.00 2.24
2515 2741 5.957842 TGTAAAACAGCAACTCCAATAGG 57.042 39.130 0.00 0.00 0.00 2.57
2571 2797 9.337396 TCAACTAGTACTTCATTTGAAACATGT 57.663 29.630 0.00 0.00 33.07 3.21
2601 2827 7.639039 TCAAACACAGCAAATTCAACTACTAG 58.361 34.615 0.00 0.00 0.00 2.57
2684 2910 9.731819 CTATTTCAACTAATTCGAGCTACTACA 57.268 33.333 0.00 0.00 0.00 2.74
2697 2923 7.941919 TCGAGCTACTACATTCATCAAGTTAT 58.058 34.615 0.00 0.00 0.00 1.89
2698 2924 8.076781 TCGAGCTACTACATTCATCAAGTTATC 58.923 37.037 0.00 0.00 0.00 1.75
2699 2925 7.060059 CGAGCTACTACATTCATCAAGTTATCG 59.940 40.741 0.00 0.00 0.00 2.92
2706 2941 9.335891 CTACATTCATCAAGTTATCGCTACTAG 57.664 37.037 0.00 0.00 0.00 2.57
2712 2947 9.205719 TCATCAAGTTATCGCTACTAGTACTAG 57.794 37.037 25.30 25.30 39.04 2.57
2714 2949 8.954950 TCAAGTTATCGCTACTAGTACTAGTT 57.045 34.615 34.30 21.19 43.35 2.24
2715 2950 9.039870 TCAAGTTATCGCTACTAGTACTAGTTC 57.960 37.037 34.30 25.10 43.35 3.01
2716 2951 7.636259 AGTTATCGCTACTAGTACTAGTTCG 57.364 40.000 34.30 32.24 43.35 3.95
2717 2952 7.429633 AGTTATCGCTACTAGTACTAGTTCGA 58.570 38.462 35.43 35.43 43.35 3.71
2725 2960 9.691362 GCTACTAGTACTAGTTCGAACTACTAT 57.309 37.037 34.30 21.54 43.35 2.12
2737 2972 7.947090 GTTCGAACTACTATTTGAACTACACC 58.053 38.462 20.97 0.00 44.54 4.16
2744 2979 7.974501 ACTACTATTTGAACTACACCGAAGATG 59.025 37.037 0.00 0.00 0.00 2.90
2754 2989 4.189639 ACACCGAAGATGAAACTACTCC 57.810 45.455 0.00 0.00 0.00 3.85
2762 2997 6.420306 CGAAGATGAAACTACTCCTCATCATG 59.580 42.308 12.42 0.00 45.21 3.07
2780 3015 1.371558 GGGAGGTCGTGAACTGCTT 59.628 57.895 6.38 0.00 36.64 3.91
2787 3022 1.527311 GTCGTGAACTGCTTCCAGAAC 59.473 52.381 0.00 0.00 41.77 3.01
2796 3031 3.008330 CTGCTTCCAGAACTCATCCTTG 58.992 50.000 0.00 0.00 41.77 3.61
2799 3034 3.823304 GCTTCCAGAACTCATCCTTGTTT 59.177 43.478 0.00 0.00 0.00 2.83
2800 3035 4.320788 GCTTCCAGAACTCATCCTTGTTTG 60.321 45.833 0.00 0.00 0.00 2.93
2801 3036 3.754965 TCCAGAACTCATCCTTGTTTGG 58.245 45.455 0.00 0.00 0.00 3.28
2802 3037 2.821969 CCAGAACTCATCCTTGTTTGGG 59.178 50.000 0.00 0.00 0.00 4.12
2803 3038 3.490348 CAGAACTCATCCTTGTTTGGGT 58.510 45.455 0.00 0.00 0.00 4.51
2804 3039 3.891366 CAGAACTCATCCTTGTTTGGGTT 59.109 43.478 0.00 0.00 39.21 4.11
2805 3040 3.891366 AGAACTCATCCTTGTTTGGGTTG 59.109 43.478 0.00 0.00 36.69 3.77
2806 3041 3.312736 ACTCATCCTTGTTTGGGTTGT 57.687 42.857 0.00 0.00 0.00 3.32
2807 3042 3.642141 ACTCATCCTTGTTTGGGTTGTT 58.358 40.909 0.00 0.00 0.00 2.83
2808 3043 3.384467 ACTCATCCTTGTTTGGGTTGTTG 59.616 43.478 0.00 0.00 0.00 3.33
2809 3044 2.102252 TCATCCTTGTTTGGGTTGTTGC 59.898 45.455 0.00 0.00 0.00 4.17
2810 3045 1.561643 TCCTTGTTTGGGTTGTTGCA 58.438 45.000 0.00 0.00 0.00 4.08
2811 3046 1.205893 TCCTTGTTTGGGTTGTTGCAC 59.794 47.619 0.00 0.00 0.00 4.57
2812 3047 1.650825 CTTGTTTGGGTTGTTGCACC 58.349 50.000 0.00 0.00 35.88 5.01
2818 3053 2.203294 GGTTGTTGCACCCCTCGT 60.203 61.111 0.00 0.00 0.00 4.18
2819 3054 2.258726 GGTTGTTGCACCCCTCGTC 61.259 63.158 0.00 0.00 0.00 4.20
2820 3055 2.112297 TTGTTGCACCCCTCGTCC 59.888 61.111 0.00 0.00 0.00 4.79
2821 3056 3.485346 TTGTTGCACCCCTCGTCCC 62.485 63.158 0.00 0.00 0.00 4.46
2822 3057 4.717313 GTTGCACCCCTCGTCCCC 62.717 72.222 0.00 0.00 0.00 4.81
2825 3060 4.791069 GCACCCCTCGTCCCCCTA 62.791 72.222 0.00 0.00 0.00 3.53
2826 3061 2.285868 CACCCCTCGTCCCCCTAT 59.714 66.667 0.00 0.00 0.00 2.57
2827 3062 2.140792 CACCCCTCGTCCCCCTATG 61.141 68.421 0.00 0.00 0.00 2.23
2828 3063 2.330209 ACCCCTCGTCCCCCTATGA 61.330 63.158 0.00 0.00 0.00 2.15
2829 3064 1.534235 CCCCTCGTCCCCCTATGAG 60.534 68.421 0.00 0.00 33.12 2.90
2830 3065 1.233369 CCCTCGTCCCCCTATGAGT 59.767 63.158 0.00 0.00 31.67 3.41
2831 3066 0.828343 CCCTCGTCCCCCTATGAGTC 60.828 65.000 0.00 0.00 31.67 3.36
2832 3067 0.106167 CCTCGTCCCCCTATGAGTCA 60.106 60.000 0.00 0.00 31.67 3.41
2833 3068 1.481428 CCTCGTCCCCCTATGAGTCAT 60.481 57.143 11.12 11.12 31.67 3.06
2834 3069 1.889829 CTCGTCCCCCTATGAGTCATC 59.110 57.143 9.42 0.00 0.00 2.92
2835 3070 1.216930 TCGTCCCCCTATGAGTCATCA 59.783 52.381 9.42 0.00 40.50 3.07
2836 3071 1.341531 CGTCCCCCTATGAGTCATCAC 59.658 57.143 9.42 0.00 38.57 3.06
2837 3072 2.398588 GTCCCCCTATGAGTCATCACA 58.601 52.381 9.42 0.00 38.57 3.58
2838 3073 2.366916 GTCCCCCTATGAGTCATCACAG 59.633 54.545 9.42 1.42 38.57 3.66
2839 3074 2.023015 TCCCCCTATGAGTCATCACAGT 60.023 50.000 9.42 0.00 38.57 3.55
2840 3075 2.366916 CCCCCTATGAGTCATCACAGTC 59.633 54.545 9.42 0.00 38.57 3.51
2841 3076 2.366916 CCCCTATGAGTCATCACAGTCC 59.633 54.545 9.42 0.00 38.57 3.85
2842 3077 3.303938 CCCTATGAGTCATCACAGTCCT 58.696 50.000 9.42 0.00 38.57 3.85
2843 3078 3.320541 CCCTATGAGTCATCACAGTCCTC 59.679 52.174 9.42 0.00 38.57 3.71
2844 3079 3.320541 CCTATGAGTCATCACAGTCCTCC 59.679 52.174 9.42 0.00 38.57 4.30
2845 3080 2.612285 TGAGTCATCACAGTCCTCCT 57.388 50.000 0.00 0.00 0.00 3.69
2846 3081 2.451490 TGAGTCATCACAGTCCTCCTC 58.549 52.381 0.00 0.00 0.00 3.71
2847 3082 2.042297 TGAGTCATCACAGTCCTCCTCT 59.958 50.000 0.00 0.00 0.00 3.69
2848 3083 2.426738 GAGTCATCACAGTCCTCCTCTG 59.573 54.545 0.00 0.00 38.68 3.35
2849 3084 2.042297 AGTCATCACAGTCCTCCTCTGA 59.958 50.000 0.00 0.00 36.81 3.27
2850 3085 2.426738 GTCATCACAGTCCTCCTCTGAG 59.573 54.545 0.00 0.00 38.42 3.35
2851 3086 2.042297 TCATCACAGTCCTCCTCTGAGT 59.958 50.000 3.66 0.00 36.86 3.41
2852 3087 3.267031 TCATCACAGTCCTCCTCTGAGTA 59.733 47.826 3.66 0.00 36.86 2.59
2853 3088 3.358111 TCACAGTCCTCCTCTGAGTAG 57.642 52.381 3.66 0.00 36.86 2.57
2854 3089 2.025793 TCACAGTCCTCCTCTGAGTAGG 60.026 54.545 9.87 9.87 36.86 3.18
2855 3090 1.286553 ACAGTCCTCCTCTGAGTAGGG 59.713 57.143 15.39 8.55 36.86 3.53
2856 3091 1.566703 CAGTCCTCCTCTGAGTAGGGA 59.433 57.143 15.39 10.51 36.86 4.20
2857 3092 2.176798 CAGTCCTCCTCTGAGTAGGGAT 59.823 54.545 15.39 2.93 36.86 3.85
2858 3093 2.176798 AGTCCTCCTCTGAGTAGGGATG 59.823 54.545 15.39 0.00 36.86 3.51
2859 3094 1.501170 TCCTCCTCTGAGTAGGGATGG 59.499 57.143 15.39 5.09 36.86 3.51
2860 3095 1.337118 CTCCTCTGAGTAGGGATGGC 58.663 60.000 3.66 0.00 37.24 4.40
2861 3096 0.636647 TCCTCTGAGTAGGGATGGCA 59.363 55.000 3.66 0.00 37.24 4.92
2862 3097 1.008327 TCCTCTGAGTAGGGATGGCAA 59.992 52.381 3.66 0.00 37.24 4.52
2863 3098 2.053244 CCTCTGAGTAGGGATGGCAAT 58.947 52.381 3.66 0.00 32.55 3.56
2864 3099 2.224475 CCTCTGAGTAGGGATGGCAATG 60.224 54.545 3.66 0.00 32.55 2.82
2865 3100 1.770658 TCTGAGTAGGGATGGCAATGG 59.229 52.381 0.00 0.00 0.00 3.16
2866 3101 0.846015 TGAGTAGGGATGGCAATGGG 59.154 55.000 0.00 0.00 0.00 4.00
2867 3102 0.111253 GAGTAGGGATGGCAATGGGG 59.889 60.000 0.00 0.00 0.00 4.96
2868 3103 0.328450 AGTAGGGATGGCAATGGGGA 60.328 55.000 0.00 0.00 0.00 4.81
2869 3104 0.779997 GTAGGGATGGCAATGGGGAT 59.220 55.000 0.00 0.00 0.00 3.85
2870 3105 1.992557 GTAGGGATGGCAATGGGGATA 59.007 52.381 0.00 0.00 0.00 2.59
2871 3106 0.779997 AGGGATGGCAATGGGGATAC 59.220 55.000 0.00 0.00 0.00 2.24
2887 3122 4.287766 GGATACCTACAACATCCCCATC 57.712 50.000 0.00 0.00 33.47 3.51
2888 3123 3.009143 GGATACCTACAACATCCCCATCC 59.991 52.174 0.00 0.00 33.47 3.51
2889 3124 1.222567 ACCTACAACATCCCCATCCC 58.777 55.000 0.00 0.00 0.00 3.85
2890 3125 0.478507 CCTACAACATCCCCATCCCC 59.521 60.000 0.00 0.00 0.00 4.81
2891 3126 1.221635 CTACAACATCCCCATCCCCA 58.778 55.000 0.00 0.00 0.00 4.96
2892 3127 1.782752 CTACAACATCCCCATCCCCAT 59.217 52.381 0.00 0.00 0.00 4.00
2893 3128 0.557729 ACAACATCCCCATCCCCATC 59.442 55.000 0.00 0.00 0.00 3.51
2894 3129 0.855598 CAACATCCCCATCCCCATCT 59.144 55.000 0.00 0.00 0.00 2.90
2895 3130 2.065007 CAACATCCCCATCCCCATCTA 58.935 52.381 0.00 0.00 0.00 1.98
2896 3131 2.651334 CAACATCCCCATCCCCATCTAT 59.349 50.000 0.00 0.00 0.00 1.98
2897 3132 3.023931 ACATCCCCATCCCCATCTATT 57.976 47.619 0.00 0.00 0.00 1.73
2898 3133 2.922283 ACATCCCCATCCCCATCTATTC 59.078 50.000 0.00 0.00 0.00 1.75
2899 3134 2.059756 TCCCCATCCCCATCTATTCC 57.940 55.000 0.00 0.00 0.00 3.01
2900 3135 1.002857 CCCCATCCCCATCTATTCCC 58.997 60.000 0.00 0.00 0.00 3.97
2901 3136 1.489679 CCCCATCCCCATCTATTCCCT 60.490 57.143 0.00 0.00 0.00 4.20
2902 3137 2.226144 CCCCATCCCCATCTATTCCCTA 60.226 54.545 0.00 0.00 0.00 3.53
2903 3138 3.574231 CCCCATCCCCATCTATTCCCTAT 60.574 52.174 0.00 0.00 0.00 2.57
2904 3139 3.718956 CCCATCCCCATCTATTCCCTATC 59.281 52.174 0.00 0.00 0.00 2.08
2905 3140 4.374403 CCATCCCCATCTATTCCCTATCA 58.626 47.826 0.00 0.00 0.00 2.15
2906 3141 4.980342 CCATCCCCATCTATTCCCTATCAT 59.020 45.833 0.00 0.00 0.00 2.45
2907 3142 5.072872 CCATCCCCATCTATTCCCTATCATC 59.927 48.000 0.00 0.00 0.00 2.92
2908 3143 4.635473 TCCCCATCTATTCCCTATCATCC 58.365 47.826 0.00 0.00 0.00 3.51
2909 3144 3.718956 CCCCATCTATTCCCTATCATCCC 59.281 52.174 0.00 0.00 0.00 3.85
2910 3145 4.374403 CCCATCTATTCCCTATCATCCCA 58.626 47.826 0.00 0.00 0.00 4.37
2911 3146 4.980342 CCCATCTATTCCCTATCATCCCAT 59.020 45.833 0.00 0.00 0.00 4.00
2912 3147 5.072872 CCCATCTATTCCCTATCATCCCATC 59.927 48.000 0.00 0.00 0.00 3.51
2913 3148 5.072872 CCATCTATTCCCTATCATCCCATCC 59.927 48.000 0.00 0.00 0.00 3.51
2914 3149 4.635473 TCTATTCCCTATCATCCCATCCC 58.365 47.826 0.00 0.00 0.00 3.85
2915 3150 2.059756 TTCCCTATCATCCCATCCCC 57.940 55.000 0.00 0.00 0.00 4.81
2916 3151 0.881082 TCCCTATCATCCCATCCCCA 59.119 55.000 0.00 0.00 0.00 4.96
2917 3152 1.446428 TCCCTATCATCCCATCCCCAT 59.554 52.381 0.00 0.00 0.00 4.00
2918 3153 1.849039 CCCTATCATCCCATCCCCATC 59.151 57.143 0.00 0.00 0.00 3.51
2919 3154 1.849039 CCTATCATCCCATCCCCATCC 59.151 57.143 0.00 0.00 0.00 3.51
2920 3155 1.849039 CTATCATCCCATCCCCATCCC 59.151 57.143 0.00 0.00 0.00 3.85
2921 3156 0.852683 ATCATCCCATCCCCATCCCC 60.853 60.000 0.00 0.00 0.00 4.81
2922 3157 2.532715 ATCCCATCCCCATCCCCG 60.533 66.667 0.00 0.00 0.00 5.73
2923 3158 3.442462 ATCCCATCCCCATCCCCGT 62.442 63.158 0.00 0.00 0.00 5.28
2924 3159 2.951578 ATCCCATCCCCATCCCCGTT 62.952 60.000 0.00 0.00 0.00 4.44
2925 3160 2.700185 CCCATCCCCATCCCCGTTT 61.700 63.158 0.00 0.00 0.00 3.60
2926 3161 1.357272 CCCATCCCCATCCCCGTTTA 61.357 60.000 0.00 0.00 0.00 2.01
2927 3162 0.179001 CCATCCCCATCCCCGTTTAC 60.179 60.000 0.00 0.00 0.00 2.01
2928 3163 0.548989 CATCCCCATCCCCGTTTACA 59.451 55.000 0.00 0.00 0.00 2.41
2929 3164 1.144913 CATCCCCATCCCCGTTTACAT 59.855 52.381 0.00 0.00 0.00 2.29
2930 3165 0.548989 TCCCCATCCCCGTTTACATG 59.451 55.000 0.00 0.00 0.00 3.21
2931 3166 0.548989 CCCCATCCCCGTTTACATGA 59.451 55.000 0.00 0.00 0.00 3.07
2932 3167 1.675552 CCCATCCCCGTTTACATGAC 58.324 55.000 0.00 0.00 0.00 3.06
2933 3168 1.675552 CCATCCCCGTTTACATGACC 58.324 55.000 0.00 0.00 0.00 4.02
2934 3169 1.065053 CCATCCCCGTTTACATGACCA 60.065 52.381 0.00 0.00 0.00 4.02
2935 3170 2.288666 CATCCCCGTTTACATGACCAG 58.711 52.381 0.00 0.00 0.00 4.00
2936 3171 0.616371 TCCCCGTTTACATGACCAGG 59.384 55.000 0.00 0.00 0.00 4.45
2937 3172 0.393808 CCCCGTTTACATGACCAGGG 60.394 60.000 0.00 5.40 37.20 4.45
2938 3173 0.616371 CCCGTTTACATGACCAGGGA 59.384 55.000 0.00 0.00 39.71 4.20
2939 3174 1.211949 CCCGTTTACATGACCAGGGAT 59.788 52.381 0.00 0.00 39.71 3.85
2940 3175 2.288666 CCGTTTACATGACCAGGGATG 58.711 52.381 0.00 0.00 0.00 3.51
2941 3176 2.093181 CCGTTTACATGACCAGGGATGA 60.093 50.000 0.00 0.00 0.00 2.92
2942 3177 3.605634 CGTTTACATGACCAGGGATGAA 58.394 45.455 0.00 0.00 0.00 2.57
2943 3178 4.006989 CGTTTACATGACCAGGGATGAAA 58.993 43.478 0.00 2.57 0.00 2.69
2944 3179 4.640201 CGTTTACATGACCAGGGATGAAAT 59.360 41.667 0.00 0.00 0.00 2.17
2945 3180 5.125417 CGTTTACATGACCAGGGATGAAATT 59.875 40.000 0.00 0.00 0.00 1.82
2946 3181 6.350110 CGTTTACATGACCAGGGATGAAATTT 60.350 38.462 0.00 0.00 0.00 1.82
2947 3182 6.773976 TTACATGACCAGGGATGAAATTTC 57.226 37.500 11.41 11.41 0.00 2.17
2948 3183 4.026052 ACATGACCAGGGATGAAATTTCC 58.974 43.478 15.48 0.69 0.00 3.13
2956 3191 3.239449 GGGATGAAATTTCCCCATACCC 58.761 50.000 21.41 16.50 46.20 3.69
2957 3192 3.374762 GGGATGAAATTTCCCCATACCCA 60.375 47.826 21.41 1.18 46.20 4.51
2958 3193 4.492646 GGATGAAATTTCCCCATACCCAT 58.507 43.478 15.48 0.00 0.00 4.00
2959 3194 4.284234 GGATGAAATTTCCCCATACCCATG 59.716 45.833 15.48 0.00 0.00 3.66
2960 3195 3.037549 TGAAATTTCCCCATACCCATGC 58.962 45.455 15.48 0.00 0.00 4.06
2961 3196 2.101640 AATTTCCCCATACCCATGCC 57.898 50.000 0.00 0.00 0.00 4.40
2962 3197 0.190815 ATTTCCCCATACCCATGCCC 59.809 55.000 0.00 0.00 0.00 5.36
2963 3198 1.955458 TTTCCCCATACCCATGCCCC 61.955 60.000 0.00 0.00 0.00 5.80
2964 3199 3.109344 CCCCATACCCATGCCCCA 61.109 66.667 0.00 0.00 0.00 4.96
2965 3200 2.481539 CCCCATACCCATGCCCCAT 61.482 63.158 0.00 0.00 0.00 4.00
2966 3201 1.077265 CCCATACCCATGCCCCATC 59.923 63.158 0.00 0.00 0.00 3.51
2967 3202 1.303561 CCATACCCATGCCCCATCG 60.304 63.158 0.00 0.00 0.00 3.84
2968 3203 1.303561 CATACCCATGCCCCATCGG 60.304 63.158 0.00 0.00 0.00 4.18
2979 3214 4.547367 CCATCGGGGAACGGAGCC 62.547 72.222 0.00 0.00 43.43 4.70
2980 3215 4.547367 CATCGGGGAACGGAGCCC 62.547 72.222 0.00 0.00 43.43 5.19
2985 3220 3.326900 GGGAACGGAGCCCCATTA 58.673 61.111 0.00 0.00 42.32 1.90
2986 3221 1.844130 GGGAACGGAGCCCCATTAT 59.156 57.895 0.00 0.00 42.32 1.28
2987 3222 0.537371 GGGAACGGAGCCCCATTATG 60.537 60.000 0.00 0.00 42.32 1.90
2988 3223 0.537371 GGAACGGAGCCCCATTATGG 60.537 60.000 3.85 3.85 37.25 2.74
2989 3224 0.182775 GAACGGAGCCCCATTATGGT 59.817 55.000 10.65 0.00 35.17 3.55
2990 3225 0.182775 AACGGAGCCCCATTATGGTC 59.817 55.000 10.65 1.20 35.17 4.02
2991 3226 1.073199 CGGAGCCCCATTATGGTCC 59.927 63.158 10.65 9.59 43.95 4.46
2992 3227 1.460699 GGAGCCCCATTATGGTCCC 59.539 63.158 10.65 2.06 42.08 4.46
2993 3228 1.460699 GAGCCCCATTATGGTCCCC 59.539 63.158 10.65 0.00 35.17 4.81
2994 3229 1.309549 AGCCCCATTATGGTCCCCA 60.310 57.895 10.65 0.00 35.17 4.96
2995 3230 0.705874 AGCCCCATTATGGTCCCCAT 60.706 55.000 10.65 0.81 46.99 4.00
2996 3231 0.251787 GCCCCATTATGGTCCCCATC 60.252 60.000 10.65 0.00 40.74 3.51
2997 3232 0.409484 CCCCATTATGGTCCCCATCC 59.591 60.000 10.65 0.00 40.74 3.51
2998 3233 0.409484 CCCATTATGGTCCCCATCCC 59.591 60.000 10.65 0.00 40.74 3.85
2999 3234 0.409484 CCATTATGGTCCCCATCCCC 59.591 60.000 2.48 0.00 40.74 4.81
3000 3235 1.157111 CATTATGGTCCCCATCCCCA 58.843 55.000 0.00 0.00 40.74 4.96
3001 3236 1.718226 CATTATGGTCCCCATCCCCAT 59.282 52.381 0.00 0.00 40.74 4.00
3002 3237 2.845970 TTATGGTCCCCATCCCCATA 57.154 50.000 0.00 0.00 40.74 2.74
3003 3238 2.845970 TATGGTCCCCATCCCCATAA 57.154 50.000 0.00 0.00 40.74 1.90
3004 3239 1.934218 ATGGTCCCCATCCCCATAAA 58.066 50.000 0.00 0.00 40.74 1.40
3005 3240 0.930726 TGGTCCCCATCCCCATAAAC 59.069 55.000 0.00 0.00 0.00 2.01
3006 3241 0.930726 GGTCCCCATCCCCATAAACA 59.069 55.000 0.00 0.00 0.00 2.83
3007 3242 1.289530 GGTCCCCATCCCCATAAACAA 59.710 52.381 0.00 0.00 0.00 2.83
3008 3243 2.292587 GGTCCCCATCCCCATAAACAAA 60.293 50.000 0.00 0.00 0.00 2.83
3009 3244 3.632385 GGTCCCCATCCCCATAAACAAAT 60.632 47.826 0.00 0.00 0.00 2.32
3010 3245 4.388118 GGTCCCCATCCCCATAAACAAATA 60.388 45.833 0.00 0.00 0.00 1.40
3011 3246 4.587262 GTCCCCATCCCCATAAACAAATAC 59.413 45.833 0.00 0.00 0.00 1.89
3012 3247 4.484270 TCCCCATCCCCATAAACAAATACT 59.516 41.667 0.00 0.00 0.00 2.12
3013 3248 4.832823 CCCCATCCCCATAAACAAATACTC 59.167 45.833 0.00 0.00 0.00 2.59
3014 3249 5.454062 CCCATCCCCATAAACAAATACTCA 58.546 41.667 0.00 0.00 0.00 3.41
3015 3250 6.077322 CCCATCCCCATAAACAAATACTCAT 58.923 40.000 0.00 0.00 0.00 2.90
3016 3251 7.237982 CCCATCCCCATAAACAAATACTCATA 58.762 38.462 0.00 0.00 0.00 2.15
3017 3252 7.895429 CCCATCCCCATAAACAAATACTCATAT 59.105 37.037 0.00 0.00 0.00 1.78
3018 3253 9.973661 CCATCCCCATAAACAAATACTCATATA 57.026 33.333 0.00 0.00 0.00 0.86
3051 3286 9.944376 ATGACACCCTATAATCAACATACATAC 57.056 33.333 0.00 0.00 0.00 2.39
3052 3287 8.929487 TGACACCCTATAATCAACATACATACA 58.071 33.333 0.00 0.00 0.00 2.29
3053 3288 9.944376 GACACCCTATAATCAACATACATACAT 57.056 33.333 0.00 0.00 0.00 2.29
3054 3289 9.725019 ACACCCTATAATCAACATACATACATG 57.275 33.333 0.00 0.00 0.00 3.21
3055 3290 9.166173 CACCCTATAATCAACATACATACATGG 57.834 37.037 0.00 0.00 0.00 3.66
3056 3291 8.890472 ACCCTATAATCAACATACATACATGGT 58.110 33.333 0.00 0.00 0.00 3.55
3057 3292 9.166173 CCCTATAATCAACATACATACATGGTG 57.834 37.037 0.00 0.00 43.66 4.17
3058 3293 9.725019 CCTATAATCAACATACATACATGGTGT 57.275 33.333 10.32 10.32 42.97 4.16
3062 3297 6.751514 TCAACATACATACATGGTGTTTCC 57.248 37.500 10.68 0.00 42.97 3.13
3063 3298 6.480763 TCAACATACATACATGGTGTTTCCT 58.519 36.000 10.68 0.00 42.97 3.36
3064 3299 6.945435 TCAACATACATACATGGTGTTTCCTT 59.055 34.615 10.68 0.00 42.97 3.36
3065 3300 6.757897 ACATACATACATGGTGTTTCCTTG 57.242 37.500 10.68 0.00 44.08 3.61
3071 3306 1.270550 CATGGTGTTTCCTTGTCCTGC 59.729 52.381 0.00 0.00 36.83 4.85
3072 3307 0.550914 TGGTGTTTCCTTGTCCTGCT 59.449 50.000 0.00 0.00 37.07 4.24
3073 3308 1.771854 TGGTGTTTCCTTGTCCTGCTA 59.228 47.619 0.00 0.00 37.07 3.49
3074 3309 2.173782 TGGTGTTTCCTTGTCCTGCTAA 59.826 45.455 0.00 0.00 37.07 3.09
3075 3310 3.181434 TGGTGTTTCCTTGTCCTGCTAAT 60.181 43.478 0.00 0.00 37.07 1.73
3076 3311 3.191371 GGTGTTTCCTTGTCCTGCTAATG 59.809 47.826 0.00 0.00 0.00 1.90
3077 3312 3.821033 GTGTTTCCTTGTCCTGCTAATGT 59.179 43.478 0.00 0.00 0.00 2.71
3078 3313 4.072131 TGTTTCCTTGTCCTGCTAATGTC 58.928 43.478 0.00 0.00 0.00 3.06
3079 3314 4.202461 TGTTTCCTTGTCCTGCTAATGTCT 60.202 41.667 0.00 0.00 0.00 3.41
3080 3315 5.012664 TGTTTCCTTGTCCTGCTAATGTCTA 59.987 40.000 0.00 0.00 0.00 2.59
3081 3316 5.957771 TTCCTTGTCCTGCTAATGTCTAT 57.042 39.130 0.00 0.00 0.00 1.98
3082 3317 5.537300 TCCTTGTCCTGCTAATGTCTATC 57.463 43.478 0.00 0.00 0.00 2.08
3083 3318 5.211973 TCCTTGTCCTGCTAATGTCTATCT 58.788 41.667 0.00 0.00 0.00 1.98
3084 3319 6.373759 TCCTTGTCCTGCTAATGTCTATCTA 58.626 40.000 0.00 0.00 0.00 1.98
3085 3320 6.491745 TCCTTGTCCTGCTAATGTCTATCTAG 59.508 42.308 0.00 0.00 0.00 2.43
3086 3321 6.491745 CCTTGTCCTGCTAATGTCTATCTAGA 59.508 42.308 0.00 0.00 0.00 2.43
3087 3322 7.178274 CCTTGTCCTGCTAATGTCTATCTAGAT 59.822 40.741 10.73 10.73 34.39 1.98
3088 3323 7.695480 TGTCCTGCTAATGTCTATCTAGATC 57.305 40.000 8.95 0.00 34.39 2.75
3089 3324 6.372937 TGTCCTGCTAATGTCTATCTAGATCG 59.627 42.308 8.95 2.79 34.39 3.69
3090 3325 6.373216 GTCCTGCTAATGTCTATCTAGATCGT 59.627 42.308 8.95 0.00 34.39 3.73
3091 3326 7.549842 GTCCTGCTAATGTCTATCTAGATCGTA 59.450 40.741 8.95 0.00 34.39 3.43
3092 3327 8.268605 TCCTGCTAATGTCTATCTAGATCGTAT 58.731 37.037 8.95 0.29 34.39 3.06
3093 3328 8.898761 CCTGCTAATGTCTATCTAGATCGTATT 58.101 37.037 8.95 10.55 34.39 1.89
3094 3329 9.715123 CTGCTAATGTCTATCTAGATCGTATTG 57.285 37.037 8.95 5.68 34.39 1.90
3095 3330 9.449719 TGCTAATGTCTATCTAGATCGTATTGA 57.550 33.333 8.95 0.00 34.39 2.57
3096 3331 9.710979 GCTAATGTCTATCTAGATCGTATTGAC 57.289 37.037 8.95 9.49 34.39 3.18
3100 3335 9.733556 ATGTCTATCTAGATCGTATTGACTTCT 57.266 33.333 8.95 0.00 34.39 2.85
3101 3336 9.562408 TGTCTATCTAGATCGTATTGACTTCTT 57.438 33.333 8.95 0.00 34.39 2.52
3102 3337 9.820229 GTCTATCTAGATCGTATTGACTTCTTG 57.180 37.037 8.95 0.00 34.39 3.02
3103 3338 9.004717 TCTATCTAGATCGTATTGACTTCTTGG 57.995 37.037 8.95 0.00 0.00 3.61
3104 3339 7.589958 ATCTAGATCGTATTGACTTCTTGGT 57.410 36.000 0.00 0.00 0.00 3.67
3105 3340 7.028926 TCTAGATCGTATTGACTTCTTGGTC 57.971 40.000 0.00 0.00 36.81 4.02
3106 3341 5.661056 AGATCGTATTGACTTCTTGGTCA 57.339 39.130 0.00 0.00 43.41 4.02
3107 3342 6.227298 AGATCGTATTGACTTCTTGGTCAT 57.773 37.500 0.00 0.00 44.30 3.06
3108 3343 6.045318 AGATCGTATTGACTTCTTGGTCATG 58.955 40.000 0.00 0.00 44.30 3.07
3109 3344 4.503910 TCGTATTGACTTCTTGGTCATGG 58.496 43.478 0.00 0.00 44.30 3.66
3110 3345 4.020573 TCGTATTGACTTCTTGGTCATGGT 60.021 41.667 0.00 0.00 44.30 3.55
3111 3346 4.093408 CGTATTGACTTCTTGGTCATGGTG 59.907 45.833 0.00 0.00 44.30 4.17
3112 3347 2.566833 TGACTTCTTGGTCATGGTGG 57.433 50.000 0.00 0.00 40.72 4.61
3113 3348 1.168714 GACTTCTTGGTCATGGTGGC 58.831 55.000 0.00 0.00 36.35 5.01
3114 3349 0.478072 ACTTCTTGGTCATGGTGGCA 59.522 50.000 0.00 0.00 0.00 4.92
3115 3350 1.171308 CTTCTTGGTCATGGTGGCAG 58.829 55.000 0.00 0.00 0.00 4.85
3116 3351 0.895100 TTCTTGGTCATGGTGGCAGC 60.895 55.000 10.30 10.30 0.00 5.25
3117 3352 1.303888 CTTGGTCATGGTGGCAGCT 60.304 57.895 18.53 0.36 0.00 4.24
3118 3353 1.592400 CTTGGTCATGGTGGCAGCTG 61.592 60.000 18.53 10.11 0.00 4.24
3119 3354 2.066700 TTGGTCATGGTGGCAGCTGA 62.067 55.000 20.43 15.08 0.00 4.26
3120 3355 1.748122 GGTCATGGTGGCAGCTGAG 60.748 63.158 20.43 7.67 0.00 3.35
3121 3356 1.748122 GTCATGGTGGCAGCTGAGG 60.748 63.158 20.43 0.00 0.00 3.86
3122 3357 2.226315 TCATGGTGGCAGCTGAGGT 61.226 57.895 20.43 0.00 0.00 3.85
3123 3358 2.044555 CATGGTGGCAGCTGAGGTG 61.045 63.158 20.43 7.39 0.00 4.00
3124 3359 2.226315 ATGGTGGCAGCTGAGGTGA 61.226 57.895 20.43 0.00 32.22 4.02
3125 3360 2.046507 GGTGGCAGCTGAGGTGAG 60.047 66.667 20.43 0.00 32.22 3.51
3126 3361 2.046507 GTGGCAGCTGAGGTGAGG 60.047 66.667 20.43 0.00 32.22 3.86
3127 3362 2.203832 TGGCAGCTGAGGTGAGGA 60.204 61.111 20.43 0.00 32.22 3.71
3128 3363 1.614525 TGGCAGCTGAGGTGAGGAT 60.615 57.895 20.43 0.00 32.22 3.24
3129 3364 1.153208 GGCAGCTGAGGTGAGGATG 60.153 63.158 20.43 0.00 32.22 3.51
3130 3365 1.601171 GCAGCTGAGGTGAGGATGT 59.399 57.895 20.43 0.00 32.22 3.06
3131 3366 0.743701 GCAGCTGAGGTGAGGATGTG 60.744 60.000 20.43 0.00 32.22 3.21
3132 3367 0.900421 CAGCTGAGGTGAGGATGTGA 59.100 55.000 8.42 0.00 32.22 3.58
3133 3368 1.134759 CAGCTGAGGTGAGGATGTGAG 60.135 57.143 8.42 0.00 32.22 3.51
3134 3369 1.189752 GCTGAGGTGAGGATGTGAGA 58.810 55.000 0.00 0.00 0.00 3.27
3135 3370 1.761784 GCTGAGGTGAGGATGTGAGAT 59.238 52.381 0.00 0.00 0.00 2.75
3136 3371 2.961741 GCTGAGGTGAGGATGTGAGATA 59.038 50.000 0.00 0.00 0.00 1.98
3137 3372 3.005684 GCTGAGGTGAGGATGTGAGATAG 59.994 52.174 0.00 0.00 0.00 2.08
3138 3373 3.570540 TGAGGTGAGGATGTGAGATAGG 58.429 50.000 0.00 0.00 0.00 2.57
3139 3374 3.052566 TGAGGTGAGGATGTGAGATAGGT 60.053 47.826 0.00 0.00 0.00 3.08
3140 3375 3.964031 GAGGTGAGGATGTGAGATAGGTT 59.036 47.826 0.00 0.00 0.00 3.50
3141 3376 4.366267 AGGTGAGGATGTGAGATAGGTTT 58.634 43.478 0.00 0.00 0.00 3.27
3142 3377 5.529289 AGGTGAGGATGTGAGATAGGTTTA 58.471 41.667 0.00 0.00 0.00 2.01
3143 3378 5.964477 AGGTGAGGATGTGAGATAGGTTTAA 59.036 40.000 0.00 0.00 0.00 1.52
3144 3379 6.098982 AGGTGAGGATGTGAGATAGGTTTAAG 59.901 42.308 0.00 0.00 0.00 1.85
3145 3380 6.284459 GTGAGGATGTGAGATAGGTTTAAGG 58.716 44.000 0.00 0.00 0.00 2.69
3146 3381 5.964477 TGAGGATGTGAGATAGGTTTAAGGT 59.036 40.000 0.00 0.00 0.00 3.50
3147 3382 6.443849 TGAGGATGTGAGATAGGTTTAAGGTT 59.556 38.462 0.00 0.00 0.00 3.50
3148 3383 7.037586 TGAGGATGTGAGATAGGTTTAAGGTTT 60.038 37.037 0.00 0.00 0.00 3.27
3149 3384 7.699878 AGGATGTGAGATAGGTTTAAGGTTTT 58.300 34.615 0.00 0.00 0.00 2.43
3150 3385 8.170730 AGGATGTGAGATAGGTTTAAGGTTTTT 58.829 33.333 0.00 0.00 0.00 1.94
3172 3407 5.409643 TTTCAGAGCTTCTTTTGTCTTCG 57.590 39.130 0.00 0.00 0.00 3.79
3173 3408 2.802816 TCAGAGCTTCTTTTGTCTTCGC 59.197 45.455 0.00 0.00 0.00 4.70
3174 3409 2.545526 CAGAGCTTCTTTTGTCTTCGCA 59.454 45.455 0.00 0.00 0.00 5.10
3175 3410 3.002656 CAGAGCTTCTTTTGTCTTCGCAA 59.997 43.478 0.00 0.00 0.00 4.85
3176 3411 3.249559 AGAGCTTCTTTTGTCTTCGCAAG 59.750 43.478 0.00 0.00 0.00 4.01
3177 3412 2.945668 AGCTTCTTTTGTCTTCGCAAGT 59.054 40.909 0.00 0.00 39.48 3.16
3178 3413 3.378427 AGCTTCTTTTGTCTTCGCAAGTT 59.622 39.130 0.00 0.00 39.48 2.66
3179 3414 4.105486 GCTTCTTTTGTCTTCGCAAGTTT 58.895 39.130 0.00 0.00 39.48 2.66
3180 3415 4.027377 GCTTCTTTTGTCTTCGCAAGTTTG 60.027 41.667 0.00 0.00 39.48 2.93
3181 3416 4.695217 TCTTTTGTCTTCGCAAGTTTGT 57.305 36.364 0.00 0.00 39.48 2.83
3182 3417 5.054390 TCTTTTGTCTTCGCAAGTTTGTT 57.946 34.783 0.00 0.00 39.48 2.83
3183 3418 5.465935 TCTTTTGTCTTCGCAAGTTTGTTT 58.534 33.333 0.00 0.00 39.48 2.83
3184 3419 5.344665 TCTTTTGTCTTCGCAAGTTTGTTTG 59.655 36.000 0.00 0.00 39.48 2.93
3185 3420 3.840890 TGTCTTCGCAAGTTTGTTTGT 57.159 38.095 0.00 0.00 39.48 2.83
3186 3421 3.497118 TGTCTTCGCAAGTTTGTTTGTG 58.503 40.909 0.00 0.00 39.35 3.33
3187 3422 3.189495 TGTCTTCGCAAGTTTGTTTGTGA 59.811 39.130 0.00 0.00 43.60 3.58
3193 3428 7.763172 TTCGCAAGTTTGTTTGTGAATATTT 57.237 28.000 9.82 0.00 46.68 1.40
3194 3429 7.763172 TCGCAAGTTTGTTTGTGAATATTTT 57.237 28.000 0.00 0.00 42.68 1.82
3195 3430 8.858003 TCGCAAGTTTGTTTGTGAATATTTTA 57.142 26.923 0.00 0.00 42.68 1.52
3196 3431 9.302345 TCGCAAGTTTGTTTGTGAATATTTTAA 57.698 25.926 0.00 0.00 42.68 1.52
3197 3432 9.566624 CGCAAGTTTGTTTGTGAATATTTTAAG 57.433 29.630 0.00 0.00 40.17 1.85
3198 3433 9.862585 GCAAGTTTGTTTGTGAATATTTTAAGG 57.137 29.630 0.00 0.00 0.00 2.69
3203 3438 7.954788 TGTTTGTGAATATTTTAAGGTTGGC 57.045 32.000 0.00 0.00 0.00 4.52
3204 3439 7.731054 TGTTTGTGAATATTTTAAGGTTGGCT 58.269 30.769 0.00 0.00 0.00 4.75
3205 3440 7.655328 TGTTTGTGAATATTTTAAGGTTGGCTG 59.345 33.333 0.00 0.00 0.00 4.85
3206 3441 6.909550 TGTGAATATTTTAAGGTTGGCTGT 57.090 33.333 0.00 0.00 0.00 4.40
3207 3442 8.410673 TTGTGAATATTTTAAGGTTGGCTGTA 57.589 30.769 0.00 0.00 0.00 2.74
3208 3443 8.050778 TGTGAATATTTTAAGGTTGGCTGTAG 57.949 34.615 0.00 0.00 0.00 2.74
3209 3444 7.668052 TGTGAATATTTTAAGGTTGGCTGTAGT 59.332 33.333 0.00 0.00 0.00 2.73
3210 3445 9.169592 GTGAATATTTTAAGGTTGGCTGTAGTA 57.830 33.333 0.00 0.00 0.00 1.82
3211 3446 9.914834 TGAATATTTTAAGGTTGGCTGTAGTAT 57.085 29.630 0.00 0.00 0.00 2.12
3213 3448 9.914834 AATATTTTAAGGTTGGCTGTAGTATCA 57.085 29.630 0.00 0.00 0.00 2.15
3214 3449 7.625828 ATTTTAAGGTTGGCTGTAGTATCAC 57.374 36.000 0.00 0.00 0.00 3.06
3215 3450 5.748670 TTAAGGTTGGCTGTAGTATCACA 57.251 39.130 0.00 0.00 0.00 3.58
3217 3452 3.173965 AGGTTGGCTGTAGTATCACAGT 58.826 45.455 5.26 0.00 46.31 3.55
3218 3453 3.583086 AGGTTGGCTGTAGTATCACAGTT 59.417 43.478 5.26 0.00 46.31 3.16
3219 3454 4.775780 AGGTTGGCTGTAGTATCACAGTTA 59.224 41.667 5.26 0.00 46.31 2.24
3220 3455 4.868734 GGTTGGCTGTAGTATCACAGTTAC 59.131 45.833 5.26 1.97 46.31 2.50
3221 3456 5.337330 GGTTGGCTGTAGTATCACAGTTACT 60.337 44.000 5.26 0.00 46.31 2.24
3222 3457 6.127535 GGTTGGCTGTAGTATCACAGTTACTA 60.128 42.308 5.26 0.00 46.31 1.82
3223 3458 7.318141 GTTGGCTGTAGTATCACAGTTACTAA 58.682 38.462 5.26 0.00 46.31 2.24
3224 3459 6.860080 TGGCTGTAGTATCACAGTTACTAAC 58.140 40.000 5.26 0.00 46.31 2.34
3225 3460 6.127535 TGGCTGTAGTATCACAGTTACTAACC 60.128 42.308 5.26 0.00 46.31 2.85
3226 3461 5.970023 GCTGTAGTATCACAGTTACTAACCG 59.030 44.000 5.26 0.00 46.31 4.44
3227 3462 6.441093 TGTAGTATCACAGTTACTAACCGG 57.559 41.667 0.00 0.00 34.75 5.28
3228 3463 4.996788 AGTATCACAGTTACTAACCGGG 57.003 45.455 6.32 0.00 0.00 5.73
3229 3464 4.347607 AGTATCACAGTTACTAACCGGGT 58.652 43.478 6.32 0.00 0.00 5.28
3230 3465 3.604875 ATCACAGTTACTAACCGGGTG 57.395 47.619 0.00 0.00 32.82 4.61
3231 3466 2.596346 TCACAGTTACTAACCGGGTGA 58.404 47.619 0.00 0.43 36.07 4.02
3232 3467 2.964464 TCACAGTTACTAACCGGGTGAA 59.036 45.455 0.00 0.00 35.74 3.18
3233 3468 3.387374 TCACAGTTACTAACCGGGTGAAA 59.613 43.478 0.00 0.00 35.74 2.69
3234 3469 3.744426 CACAGTTACTAACCGGGTGAAAG 59.256 47.826 0.00 0.00 33.12 2.62
3235 3470 3.244318 ACAGTTACTAACCGGGTGAAAGG 60.244 47.826 0.00 0.00 0.00 3.11
3236 3471 2.303890 AGTTACTAACCGGGTGAAAGGG 59.696 50.000 0.00 0.00 0.00 3.95
3237 3472 0.614812 TACTAACCGGGTGAAAGGGC 59.385 55.000 0.00 0.00 0.00 5.19
3238 3473 1.377229 CTAACCGGGTGAAAGGGCA 59.623 57.895 0.00 0.00 0.00 5.36
3239 3474 0.034477 CTAACCGGGTGAAAGGGCAT 60.034 55.000 0.00 0.00 0.00 4.40
3240 3475 0.406361 TAACCGGGTGAAAGGGCATT 59.594 50.000 0.00 0.00 0.00 3.56
3241 3476 0.471022 AACCGGGTGAAAGGGCATTT 60.471 50.000 6.32 0.00 0.00 2.32
3242 3477 0.898326 ACCGGGTGAAAGGGCATTTC 60.898 55.000 17.08 17.08 46.37 2.17
3243 3478 1.604147 CCGGGTGAAAGGGCATTTCC 61.604 60.000 20.51 12.16 45.74 3.13
3259 3494 6.106003 GGCATTTCCCTACTTTATGTTTTGG 58.894 40.000 0.00 0.00 0.00 3.28
3260 3495 6.071051 GGCATTTCCCTACTTTATGTTTTGGA 60.071 38.462 0.00 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 0.616111 AGTAGACCCTCTGCCCTGTG 60.616 60.000 0.00 0.00 28.67 3.66
27 28 2.206635 CAGTAGACCCTCTGCCCTG 58.793 63.158 0.00 0.00 28.67 4.45
32 33 1.140589 CGCTGCAGTAGACCCTCTG 59.859 63.158 16.64 0.00 35.12 3.35
48 49 0.099436 GATCAACATCAACCTGCCGC 59.901 55.000 0.00 0.00 0.00 6.53
49 50 1.452110 TGATCAACATCAACCTGCCG 58.548 50.000 0.00 0.00 35.99 5.69
116 117 5.296151 TCAAAACAAACCCAATGCCAATA 57.704 34.783 0.00 0.00 0.00 1.90
123 124 4.587262 GGACTACCTCAAAACAAACCCAAT 59.413 41.667 0.00 0.00 0.00 3.16
130 131 2.224354 GGGTCGGACTACCTCAAAACAA 60.224 50.000 8.23 0.00 39.65 2.83
146 147 2.761208 AGAAGAAGTACATGAGGGGTCG 59.239 50.000 0.00 0.00 0.00 4.79
168 169 0.670546 ATGCCTCCAACTTGTCGACG 60.671 55.000 11.62 0.00 0.00 5.12
170 171 0.976641 AGATGCCTCCAACTTGTCGA 59.023 50.000 0.00 0.00 0.00 4.20
211 212 6.967199 GCGGAAAGTTCATTCCTTATACTTTG 59.033 38.462 0.00 0.00 45.54 2.77
215 216 5.585047 ACAGCGGAAAGTTCATTCCTTATAC 59.415 40.000 4.71 0.00 45.54 1.47
236 237 1.626654 CCGCGCTAGGAACACAACAG 61.627 60.000 5.56 0.00 0.00 3.16
237 238 1.666553 CCGCGCTAGGAACACAACA 60.667 57.895 5.56 0.00 0.00 3.33
239 240 2.740826 GCCGCGCTAGGAACACAA 60.741 61.111 5.56 0.00 0.00 3.33
241 242 2.740714 CTTGCCGCGCTAGGAACAC 61.741 63.158 5.56 0.00 0.00 3.32
248 249 1.089481 CCAAGAATCTTGCCGCGCTA 61.089 55.000 17.03 0.00 0.00 4.26
250 251 2.100991 CCAAGAATCTTGCCGCGC 59.899 61.111 17.03 0.00 0.00 6.86
263 264 1.411246 CACATTGATCCCATGGCCAAG 59.589 52.381 10.96 4.76 0.00 3.61
275 276 3.656457 TGCTCCTGCACACATTGAT 57.344 47.368 0.00 0.00 45.31 2.57
309 310 0.112412 TTCTTTCCTTCCCCACCTGC 59.888 55.000 0.00 0.00 0.00 4.85
312 313 1.133294 TGGTTTCTTTCCTTCCCCACC 60.133 52.381 0.00 0.00 0.00 4.61
346 348 3.081804 GTGCCTAGTGGTTAGTTTGCAT 58.918 45.455 0.00 0.00 30.32 3.96
378 380 8.135529 GCCAATACAAAGATAAAGGTGATAACC 58.864 37.037 0.00 0.00 0.00 2.85
389 391 8.806429 TGAATCTCTTGCCAATACAAAGATAA 57.194 30.769 0.00 0.00 0.00 1.75
392 394 8.677300 GTTATGAATCTCTTGCCAATACAAAGA 58.323 33.333 0.00 0.00 0.00 2.52
451 454 5.998363 GGAATGACAACTTTAGAGTCCAGTT 59.002 40.000 0.00 0.00 34.21 3.16
452 455 5.552178 GGAATGACAACTTTAGAGTCCAGT 58.448 41.667 0.00 0.00 34.21 4.00
476 479 9.869844 CAATTCGATTCCAAGTACAATAATCTC 57.130 33.333 0.00 0.00 0.00 2.75
477 480 9.613428 TCAATTCGATTCCAAGTACAATAATCT 57.387 29.630 0.00 0.00 0.00 2.40
515 518 8.684520 TCTTGTTACTACTCTTTCCTATAGTGC 58.315 37.037 0.00 0.00 0.00 4.40
522 525 7.186268 AGATCCTCTTGTTACTACTCTTTCCT 58.814 38.462 0.00 0.00 0.00 3.36
523 526 7.122948 TGAGATCCTCTTGTTACTACTCTTTCC 59.877 40.741 0.00 0.00 0.00 3.13
524 527 8.057536 TGAGATCCTCTTGTTACTACTCTTTC 57.942 38.462 0.00 0.00 0.00 2.62
525 528 8.602472 ATGAGATCCTCTTGTTACTACTCTTT 57.398 34.615 0.00 0.00 0.00 2.52
527 530 7.350382 TGATGAGATCCTCTTGTTACTACTCT 58.650 38.462 0.00 0.00 0.00 3.24
528 531 7.575414 TGATGAGATCCTCTTGTTACTACTC 57.425 40.000 0.00 0.00 0.00 2.59
529 532 7.962995 TTGATGAGATCCTCTTGTTACTACT 57.037 36.000 0.00 0.00 0.00 2.57
530 533 8.874816 GTTTTGATGAGATCCTCTTGTTACTAC 58.125 37.037 0.00 0.00 0.00 2.73
563 654 2.206576 AGGTCTTCAATGGTTGGCTC 57.793 50.000 0.00 0.00 0.00 4.70
589 680 5.415389 TGATGCTTAACTTGCTGCTTCAATA 59.585 36.000 0.00 0.00 36.91 1.90
593 684 3.837213 TGATGCTTAACTTGCTGCTTC 57.163 42.857 0.00 0.00 0.00 3.86
597 688 7.096189 GCAATGATATTGATGCTTAACTTGCTG 60.096 37.037 5.77 0.00 35.93 4.41
655 756 5.357878 CGGAATATAGCACCAATATGGCATT 59.642 40.000 4.78 0.00 42.67 3.56
703 804 4.379243 CGCACCGCACCTCTCCTT 62.379 66.667 0.00 0.00 0.00 3.36
715 816 2.078958 GAATCTTACGCGAGCGCACC 62.079 60.000 15.93 0.00 44.19 5.01
716 817 1.270099 GAATCTTACGCGAGCGCAC 59.730 57.895 15.93 0.96 44.19 5.34
726 860 2.092049 ACCCCCGGAAATGGAATCTTAC 60.092 50.000 0.73 0.00 0.00 2.34
741 875 4.515191 CACATAATTAAGATGTCACCCCCG 59.485 45.833 3.39 0.00 35.31 5.73
747 881 5.297527 CAGGCAGCACATAATTAAGATGTCA 59.702 40.000 8.00 0.00 35.31 3.58
794 932 0.320771 ATCGCTATAGCAAAGGCCGG 60.321 55.000 23.99 0.00 42.56 6.13
906 1045 7.111247 CAGAATGGATTTTGGGCTATTGTTA 57.889 36.000 0.00 0.00 0.00 2.41
1081 1221 2.877360 TAGTTGACACCGATCGCCGC 62.877 60.000 10.32 0.00 36.84 6.53
1159 1299 5.685511 GCTTTACACGATCAATGTTTGTGTT 59.314 36.000 19.01 7.13 41.06 3.32
1160 1300 5.008613 AGCTTTACACGATCAATGTTTGTGT 59.991 36.000 18.16 18.16 42.81 3.72
1173 1313 2.610374 GGTGTCAAACAGCTTTACACGA 59.390 45.455 2.20 0.00 42.83 4.35
1242 1382 1.975407 GCCATTGCCTGCTGTGACT 60.975 57.895 0.00 0.00 0.00 3.41
1333 1473 4.572795 GGCGATGAGAGATATATCTGTCGA 59.427 45.833 26.29 18.69 46.76 4.20
1381 1521 2.586258 CCGATGAGATTCTTGTCGGT 57.414 50.000 22.50 0.00 44.94 4.69
1500 1640 3.386237 GACGGCAGCTGGGAGTCT 61.386 66.667 17.12 0.00 0.00 3.24
1626 1766 3.308438 GGTAGTGTGTCACCGTTGTAT 57.692 47.619 0.00 0.00 34.49 2.29
1641 1781 1.141019 CGCCAGTGCATACGGTAGT 59.859 57.895 0.00 0.00 37.32 2.73
1811 1951 2.796193 CCGATCTGCCCGTCCATCA 61.796 63.158 0.00 0.00 0.00 3.07
1870 2010 0.604578 CCGGAACTAACCTCACGGAA 59.395 55.000 0.00 0.00 43.69 4.30
2002 2142 1.170442 TACATCGGCGTGAAGTCTGA 58.830 50.000 6.85 0.00 29.89 3.27
2044 2184 2.253154 CGTGTACGTGCTCACCGA 59.747 61.111 4.97 0.00 34.11 4.69
2071 2211 0.111134 CATTGTGTGTGTGCTCGTCG 60.111 55.000 0.00 0.00 0.00 5.12
2110 2270 0.682292 TGACCTGCATTACACACGGA 59.318 50.000 0.00 0.00 0.00 4.69
2172 2332 2.427410 GCGTTGCTGCCACTTTCG 60.427 61.111 2.24 0.00 0.00 3.46
2180 2340 1.822250 GCGAGTATAGGCGTTGCTGC 61.822 60.000 0.00 0.00 0.00 5.25
2181 2341 1.215655 GGCGAGTATAGGCGTTGCTG 61.216 60.000 0.00 0.00 0.00 4.41
2182 2342 1.067582 GGCGAGTATAGGCGTTGCT 59.932 57.895 0.00 0.00 0.00 3.91
2186 2346 1.734137 CAGTGGCGAGTATAGGCGT 59.266 57.895 0.00 0.00 39.71 5.68
2231 2439 1.503818 TTCGAGCCGTTCACCTTTGC 61.504 55.000 0.00 0.00 0.00 3.68
2238 2446 2.591311 GCGTTGTTCGAGCCGTTCA 61.591 57.895 0.00 0.00 42.86 3.18
2305 2513 1.068083 ACGCATAGGCATCCTGTCG 59.932 57.895 0.00 0.00 41.24 4.35
2327 2536 1.213013 AGGCGTCAACTAGCGTCTG 59.787 57.895 0.00 0.00 41.74 3.51
2391 2600 7.678947 ACATCTCCTGTTTTACATCTTTGAG 57.321 36.000 0.00 0.00 32.90 3.02
2392 2601 9.567776 TTTACATCTCCTGTTTTACATCTTTGA 57.432 29.630 0.00 0.00 39.39 2.69
2460 2686 4.936891 ACATCTTTTGTTGAAGTTGCCTC 58.063 39.130 0.00 0.00 33.74 4.70
2475 2701 9.295825 TGTTTTACATCTCCAATGTACATCTTT 57.704 29.630 9.23 0.00 34.59 2.52
2484 2710 6.017400 AGTTGCTGTTTTACATCTCCAATG 57.983 37.500 0.00 0.00 0.00 2.82
2515 2741 7.093322 AGTTTTACATCTCCATTTGCATCTC 57.907 36.000 0.00 0.00 0.00 2.75
2571 2797 8.715191 AGTTGAATTTGCTGTGTTTGAATTTA 57.285 26.923 0.00 0.00 0.00 1.40
2578 2804 7.568199 ACTAGTAGTTGAATTTGCTGTGTTT 57.432 32.000 0.00 0.00 0.00 2.83
2583 2809 9.334693 GAAATGAACTAGTAGTTGAATTTGCTG 57.665 33.333 24.62 0.00 38.80 4.41
2661 2887 8.997621 AATGTAGTAGCTCGAATTAGTTGAAA 57.002 30.769 0.00 0.00 0.00 2.69
2669 2895 7.268586 ACTTGATGAATGTAGTAGCTCGAATT 58.731 34.615 0.00 0.00 0.00 2.17
2684 2910 9.069082 AGTACTAGTAGCGATAACTTGATGAAT 57.931 33.333 1.87 0.00 0.00 2.57
2697 2923 5.655488 AGTTCGAACTAGTACTAGTAGCGA 58.345 41.667 33.99 33.99 44.96 4.93
2698 2924 5.964887 AGTTCGAACTAGTACTAGTAGCG 57.035 43.478 31.89 31.89 44.96 4.26
2699 2925 9.691362 ATAGTAGTTCGAACTAGTACTAGTAGC 57.309 37.037 37.36 24.11 45.29 3.58
2712 2947 7.201299 CGGTGTAGTTCAAATAGTAGTTCGAAC 60.201 40.741 20.71 20.71 34.38 3.95
2714 2949 6.149308 TCGGTGTAGTTCAAATAGTAGTTCGA 59.851 38.462 0.00 0.00 0.00 3.71
2715 2950 6.317088 TCGGTGTAGTTCAAATAGTAGTTCG 58.683 40.000 0.00 0.00 0.00 3.95
2716 2951 8.025445 TCTTCGGTGTAGTTCAAATAGTAGTTC 58.975 37.037 0.00 0.00 0.00 3.01
2717 2952 7.889469 TCTTCGGTGTAGTTCAAATAGTAGTT 58.111 34.615 0.00 0.00 0.00 2.24
2725 2960 6.053005 AGTTTCATCTTCGGTGTAGTTCAAA 58.947 36.000 0.00 0.00 0.00 2.69
2737 2972 5.895928 TGATGAGGAGTAGTTTCATCTTCG 58.104 41.667 18.91 0.00 44.67 3.79
2744 2979 4.954875 CTCCCATGATGAGGAGTAGTTTC 58.045 47.826 16.93 0.00 44.01 2.78
2754 2989 1.114627 TCACGACCTCCCATGATGAG 58.885 55.000 0.00 0.00 0.00 2.90
2762 2997 0.670854 GAAGCAGTTCACGACCTCCC 60.671 60.000 0.00 0.00 32.36 4.30
2767 3002 1.527311 GTTCTGGAAGCAGTTCACGAC 59.473 52.381 0.00 0.00 33.93 4.34
2770 3005 2.838736 TGAGTTCTGGAAGCAGTTCAC 58.161 47.619 0.00 0.00 33.93 3.18
2780 3015 3.498481 CCCAAACAAGGATGAGTTCTGGA 60.498 47.826 0.00 0.00 0.00 3.86
2787 3022 3.799917 GCAACAACCCAAACAAGGATGAG 60.800 47.826 0.00 0.00 0.00 2.90
2801 3036 2.203294 ACGAGGGGTGCAACAACC 60.203 61.111 3.06 0.00 41.21 3.77
2802 3037 2.258726 GGACGAGGGGTGCAACAAC 61.259 63.158 3.06 0.00 39.98 3.32
2803 3038 2.112297 GGACGAGGGGTGCAACAA 59.888 61.111 3.06 0.00 39.98 2.83
2804 3039 3.948719 GGGACGAGGGGTGCAACA 61.949 66.667 3.06 0.00 39.98 3.33
2805 3040 4.717313 GGGGACGAGGGGTGCAAC 62.717 72.222 0.00 0.00 39.01 4.17
2808 3043 4.791069 TAGGGGGACGAGGGGTGC 62.791 72.222 0.00 0.00 36.02 5.01
2809 3044 2.140792 CATAGGGGGACGAGGGGTG 61.141 68.421 0.00 0.00 0.00 4.61
2810 3045 2.285868 CATAGGGGGACGAGGGGT 59.714 66.667 0.00 0.00 0.00 4.95
2811 3046 1.534235 CTCATAGGGGGACGAGGGG 60.534 68.421 0.00 0.00 0.00 4.79
2812 3047 0.828343 GACTCATAGGGGGACGAGGG 60.828 65.000 0.00 0.00 0.00 4.30
2813 3048 0.106167 TGACTCATAGGGGGACGAGG 60.106 60.000 0.00 0.00 0.00 4.63
2814 3049 1.889829 GATGACTCATAGGGGGACGAG 59.110 57.143 0.00 0.00 0.00 4.18
2815 3050 1.216930 TGATGACTCATAGGGGGACGA 59.783 52.381 0.00 0.00 0.00 4.20
2816 3051 1.341531 GTGATGACTCATAGGGGGACG 59.658 57.143 0.00 0.00 32.98 4.79
2817 3052 2.366916 CTGTGATGACTCATAGGGGGAC 59.633 54.545 0.00 0.00 37.07 4.46
2818 3053 2.023015 ACTGTGATGACTCATAGGGGGA 60.023 50.000 4.70 0.00 43.00 4.81
2819 3054 2.366916 GACTGTGATGACTCATAGGGGG 59.633 54.545 4.70 0.00 43.00 5.40
2820 3055 2.366916 GGACTGTGATGACTCATAGGGG 59.633 54.545 4.70 0.00 43.00 4.79
2821 3056 3.303938 AGGACTGTGATGACTCATAGGG 58.696 50.000 4.70 0.00 43.00 3.53
2822 3057 3.320541 GGAGGACTGTGATGACTCATAGG 59.679 52.174 4.70 0.00 43.00 2.57
2823 3058 4.214310 AGGAGGACTGTGATGACTCATAG 58.786 47.826 0.00 0.00 43.97 2.23
2824 3059 4.079500 AGAGGAGGACTGTGATGACTCATA 60.080 45.833 0.00 0.00 32.98 2.15
2825 3060 3.030291 GAGGAGGACTGTGATGACTCAT 58.970 50.000 0.00 0.00 32.98 2.90
2826 3061 2.042297 AGAGGAGGACTGTGATGACTCA 59.958 50.000 0.00 0.00 0.00 3.41
2827 3062 2.426738 CAGAGGAGGACTGTGATGACTC 59.573 54.545 0.00 0.00 42.83 3.36
2828 3063 2.042297 TCAGAGGAGGACTGTGATGACT 59.958 50.000 0.00 0.00 43.80 3.41
2829 3064 2.426738 CTCAGAGGAGGACTGTGATGAC 59.573 54.545 0.00 0.00 46.97 3.06
2830 3065 2.042297 ACTCAGAGGAGGACTGTGATGA 59.958 50.000 1.53 0.00 46.97 2.92
2831 3066 2.455557 ACTCAGAGGAGGACTGTGATG 58.544 52.381 1.53 0.00 46.97 3.07
2832 3067 2.917713 ACTCAGAGGAGGACTGTGAT 57.082 50.000 1.53 0.00 46.97 3.06
2833 3068 2.025793 CCTACTCAGAGGAGGACTGTGA 60.026 54.545 23.59 0.00 46.18 3.58
2834 3069 2.374184 CCTACTCAGAGGAGGACTGTG 58.626 57.143 23.59 0.00 45.81 3.66
2835 3070 1.286553 CCCTACTCAGAGGAGGACTGT 59.713 57.143 28.86 0.00 45.81 3.55
2836 3071 1.566703 TCCCTACTCAGAGGAGGACTG 59.433 57.143 28.86 13.13 45.81 3.51
2837 3072 1.988539 TCCCTACTCAGAGGAGGACT 58.011 55.000 28.86 0.00 45.81 3.85
2838 3073 2.593026 CATCCCTACTCAGAGGAGGAC 58.407 57.143 28.86 0.00 45.81 3.85
2839 3074 1.501170 CCATCCCTACTCAGAGGAGGA 59.499 57.143 28.86 17.41 45.81 3.71
2840 3075 2.008242 CCATCCCTACTCAGAGGAGG 57.992 60.000 21.28 21.28 45.81 4.30
2841 3076 1.337118 GCCATCCCTACTCAGAGGAG 58.663 60.000 2.03 2.03 46.96 3.69
2842 3077 0.636647 TGCCATCCCTACTCAGAGGA 59.363 55.000 1.53 0.00 39.15 3.71
2843 3078 1.500474 TTGCCATCCCTACTCAGAGG 58.500 55.000 1.53 0.00 36.23 3.69
2844 3079 2.224475 CCATTGCCATCCCTACTCAGAG 60.224 54.545 0.00 0.00 0.00 3.35
2845 3080 1.770658 CCATTGCCATCCCTACTCAGA 59.229 52.381 0.00 0.00 0.00 3.27
2846 3081 1.202855 CCCATTGCCATCCCTACTCAG 60.203 57.143 0.00 0.00 0.00 3.35
2847 3082 0.846015 CCCATTGCCATCCCTACTCA 59.154 55.000 0.00 0.00 0.00 3.41
2848 3083 0.111253 CCCCATTGCCATCCCTACTC 59.889 60.000 0.00 0.00 0.00 2.59
2849 3084 0.328450 TCCCCATTGCCATCCCTACT 60.328 55.000 0.00 0.00 0.00 2.57
2850 3085 0.779997 ATCCCCATTGCCATCCCTAC 59.220 55.000 0.00 0.00 0.00 3.18
2851 3086 1.992557 GTATCCCCATTGCCATCCCTA 59.007 52.381 0.00 0.00 0.00 3.53
2852 3087 0.779997 GTATCCCCATTGCCATCCCT 59.220 55.000 0.00 0.00 0.00 4.20
2853 3088 0.251787 GGTATCCCCATTGCCATCCC 60.252 60.000 0.00 0.00 0.00 3.85
2854 3089 0.779997 AGGTATCCCCATTGCCATCC 59.220 55.000 0.00 0.00 34.66 3.51
2855 3090 2.375174 TGTAGGTATCCCCATTGCCATC 59.625 50.000 0.00 0.00 34.66 3.51
2856 3091 2.427872 TGTAGGTATCCCCATTGCCAT 58.572 47.619 0.00 0.00 34.66 4.40
2857 3092 1.900254 TGTAGGTATCCCCATTGCCA 58.100 50.000 0.00 0.00 34.66 4.92
2858 3093 2.092103 TGTTGTAGGTATCCCCATTGCC 60.092 50.000 0.00 0.00 34.66 4.52
2859 3094 3.290948 TGTTGTAGGTATCCCCATTGC 57.709 47.619 0.00 0.00 34.66 3.56
2860 3095 4.398319 GGATGTTGTAGGTATCCCCATTG 58.602 47.826 0.00 0.00 35.43 2.82
2861 3096 4.724279 GGATGTTGTAGGTATCCCCATT 57.276 45.455 0.00 0.00 35.43 3.16
2866 3101 3.009143 GGATGGGGATGTTGTAGGTATCC 59.991 52.174 0.00 0.00 39.69 2.59
2867 3102 3.009143 GGGATGGGGATGTTGTAGGTATC 59.991 52.174 0.00 0.00 0.00 2.24
2868 3103 2.986728 GGGATGGGGATGTTGTAGGTAT 59.013 50.000 0.00 0.00 0.00 2.73
2869 3104 2.414612 GGGATGGGGATGTTGTAGGTA 58.585 52.381 0.00 0.00 0.00 3.08
2870 3105 1.222567 GGGATGGGGATGTTGTAGGT 58.777 55.000 0.00 0.00 0.00 3.08
2871 3106 0.478507 GGGGATGGGGATGTTGTAGG 59.521 60.000 0.00 0.00 0.00 3.18
2872 3107 1.221635 TGGGGATGGGGATGTTGTAG 58.778 55.000 0.00 0.00 0.00 2.74
2873 3108 1.780309 GATGGGGATGGGGATGTTGTA 59.220 52.381 0.00 0.00 0.00 2.41
2874 3109 0.557729 GATGGGGATGGGGATGTTGT 59.442 55.000 0.00 0.00 0.00 3.32
2875 3110 0.855598 AGATGGGGATGGGGATGTTG 59.144 55.000 0.00 0.00 0.00 3.33
2876 3111 2.531177 TAGATGGGGATGGGGATGTT 57.469 50.000 0.00 0.00 0.00 2.71
2877 3112 2.769011 ATAGATGGGGATGGGGATGT 57.231 50.000 0.00 0.00 0.00 3.06
2878 3113 2.243221 GGAATAGATGGGGATGGGGATG 59.757 54.545 0.00 0.00 0.00 3.51
2879 3114 2.577970 GGAATAGATGGGGATGGGGAT 58.422 52.381 0.00 0.00 0.00 3.85
2880 3115 1.488892 GGGAATAGATGGGGATGGGGA 60.489 57.143 0.00 0.00 0.00 4.81
2881 3116 1.002857 GGGAATAGATGGGGATGGGG 58.997 60.000 0.00 0.00 0.00 4.96
2882 3117 2.065798 AGGGAATAGATGGGGATGGG 57.934 55.000 0.00 0.00 0.00 4.00
2883 3118 4.374403 TGATAGGGAATAGATGGGGATGG 58.626 47.826 0.00 0.00 0.00 3.51
2884 3119 5.072872 GGATGATAGGGAATAGATGGGGATG 59.927 48.000 0.00 0.00 0.00 3.51
2885 3120 5.230759 GGATGATAGGGAATAGATGGGGAT 58.769 45.833 0.00 0.00 0.00 3.85
2886 3121 4.577245 GGGATGATAGGGAATAGATGGGGA 60.577 50.000 0.00 0.00 0.00 4.81
2887 3122 3.718956 GGGATGATAGGGAATAGATGGGG 59.281 52.174 0.00 0.00 0.00 4.96
2888 3123 4.374403 TGGGATGATAGGGAATAGATGGG 58.626 47.826 0.00 0.00 0.00 4.00
2889 3124 5.072872 GGATGGGATGATAGGGAATAGATGG 59.927 48.000 0.00 0.00 0.00 3.51
2890 3125 5.072872 GGGATGGGATGATAGGGAATAGATG 59.927 48.000 0.00 0.00 0.00 2.90
2891 3126 5.230759 GGGATGGGATGATAGGGAATAGAT 58.769 45.833 0.00 0.00 0.00 1.98
2892 3127 4.577245 GGGGATGGGATGATAGGGAATAGA 60.577 50.000 0.00 0.00 0.00 1.98
2893 3128 3.718956 GGGGATGGGATGATAGGGAATAG 59.281 52.174 0.00 0.00 0.00 1.73
2894 3129 3.082027 TGGGGATGGGATGATAGGGAATA 59.918 47.826 0.00 0.00 0.00 1.75
2895 3130 2.157643 TGGGGATGGGATGATAGGGAAT 60.158 50.000 0.00 0.00 0.00 3.01
2896 3131 1.228078 TGGGGATGGGATGATAGGGAA 59.772 52.381 0.00 0.00 0.00 3.97
2897 3132 0.881082 TGGGGATGGGATGATAGGGA 59.119 55.000 0.00 0.00 0.00 4.20
2898 3133 1.849039 GATGGGGATGGGATGATAGGG 59.151 57.143 0.00 0.00 0.00 3.53
2899 3134 1.849039 GGATGGGGATGGGATGATAGG 59.151 57.143 0.00 0.00 0.00 2.57
2900 3135 1.849039 GGGATGGGGATGGGATGATAG 59.151 57.143 0.00 0.00 0.00 2.08
2901 3136 1.560309 GGGGATGGGGATGGGATGATA 60.560 57.143 0.00 0.00 0.00 2.15
2902 3137 0.852683 GGGGATGGGGATGGGATGAT 60.853 60.000 0.00 0.00 0.00 2.45
2903 3138 1.465986 GGGGATGGGGATGGGATGA 60.466 63.158 0.00 0.00 0.00 2.92
2904 3139 2.910737 CGGGGATGGGGATGGGATG 61.911 68.421 0.00 0.00 0.00 3.51
2905 3140 2.532715 CGGGGATGGGGATGGGAT 60.533 66.667 0.00 0.00 0.00 3.85
2906 3141 3.668859 AACGGGGATGGGGATGGGA 62.669 63.158 0.00 0.00 0.00 4.37
2907 3142 1.357272 TAAACGGGGATGGGGATGGG 61.357 60.000 0.00 0.00 0.00 4.00
2908 3143 0.179001 GTAAACGGGGATGGGGATGG 60.179 60.000 0.00 0.00 0.00 3.51
2909 3144 0.548989 TGTAAACGGGGATGGGGATG 59.451 55.000 0.00 0.00 0.00 3.51
2910 3145 1.144913 CATGTAAACGGGGATGGGGAT 59.855 52.381 0.00 0.00 0.00 3.85
2911 3146 0.548989 CATGTAAACGGGGATGGGGA 59.451 55.000 0.00 0.00 0.00 4.81
2912 3147 0.548989 TCATGTAAACGGGGATGGGG 59.451 55.000 0.00 0.00 0.00 4.96
2913 3148 1.675552 GTCATGTAAACGGGGATGGG 58.324 55.000 0.00 0.00 0.00 4.00
2914 3149 1.065053 TGGTCATGTAAACGGGGATGG 60.065 52.381 0.00 0.00 0.00 3.51
2915 3150 2.288666 CTGGTCATGTAAACGGGGATG 58.711 52.381 0.00 0.00 0.00 3.51
2916 3151 1.211949 CCTGGTCATGTAAACGGGGAT 59.788 52.381 0.00 0.00 0.00 3.85
2917 3152 0.616371 CCTGGTCATGTAAACGGGGA 59.384 55.000 0.00 0.00 0.00 4.81
2918 3153 0.393808 CCCTGGTCATGTAAACGGGG 60.394 60.000 2.00 2.00 0.00 5.73
2919 3154 0.616371 TCCCTGGTCATGTAAACGGG 59.384 55.000 0.00 0.00 0.00 5.28
2920 3155 2.093181 TCATCCCTGGTCATGTAAACGG 60.093 50.000 0.00 0.00 0.00 4.44
2921 3156 3.260475 TCATCCCTGGTCATGTAAACG 57.740 47.619 0.00 0.00 0.00 3.60
2922 3157 6.530019 AATTTCATCCCTGGTCATGTAAAC 57.470 37.500 0.00 0.00 0.00 2.01
2923 3158 6.154363 GGAAATTTCATCCCTGGTCATGTAAA 59.846 38.462 19.49 0.00 0.00 2.01
2924 3159 5.656416 GGAAATTTCATCCCTGGTCATGTAA 59.344 40.000 19.49 0.00 0.00 2.41
2925 3160 5.200483 GGAAATTTCATCCCTGGTCATGTA 58.800 41.667 19.49 0.00 0.00 2.29
2926 3161 4.026052 GGAAATTTCATCCCTGGTCATGT 58.974 43.478 19.49 0.00 0.00 3.21
2927 3162 4.660789 GGAAATTTCATCCCTGGTCATG 57.339 45.455 19.49 0.00 0.00 3.07
2936 3171 3.922375 TGGGTATGGGGAAATTTCATCC 58.078 45.455 19.49 18.50 36.16 3.51
2937 3172 4.262592 GCATGGGTATGGGGAAATTTCATC 60.263 45.833 19.49 10.99 34.79 2.92
2938 3173 3.647590 GCATGGGTATGGGGAAATTTCAT 59.352 43.478 19.49 8.11 34.79 2.57
2939 3174 3.037549 GCATGGGTATGGGGAAATTTCA 58.962 45.455 19.49 0.42 34.79 2.69
2940 3175 2.368548 GGCATGGGTATGGGGAAATTTC 59.631 50.000 9.83 9.83 34.79 2.17
2941 3176 2.407562 GGCATGGGTATGGGGAAATTT 58.592 47.619 0.00 0.00 34.79 1.82
2942 3177 1.414392 GGGCATGGGTATGGGGAAATT 60.414 52.381 0.00 0.00 34.79 1.82
2943 3178 0.190815 GGGCATGGGTATGGGGAAAT 59.809 55.000 0.00 0.00 34.79 2.17
2944 3179 1.623625 GGGCATGGGTATGGGGAAA 59.376 57.895 0.00 0.00 34.79 3.13
2945 3180 2.399607 GGGGCATGGGTATGGGGAA 61.400 63.158 0.00 0.00 34.79 3.97
2946 3181 2.780924 GGGGCATGGGTATGGGGA 60.781 66.667 0.00 0.00 34.79 4.81
2947 3182 2.445492 GATGGGGCATGGGTATGGGG 62.445 65.000 0.00 0.00 34.79 4.96
2948 3183 1.077265 GATGGGGCATGGGTATGGG 59.923 63.158 0.00 0.00 34.79 4.00
2949 3184 1.303561 CGATGGGGCATGGGTATGG 60.304 63.158 0.00 0.00 34.79 2.74
2950 3185 1.303561 CCGATGGGGCATGGGTATG 60.304 63.158 0.00 0.00 35.47 2.39
2951 3186 3.170362 CCGATGGGGCATGGGTAT 58.830 61.111 0.00 0.00 35.47 2.73
2962 3197 4.547367 GGCTCCGTTCCCCGATGG 62.547 72.222 0.00 0.00 39.56 3.51
2963 3198 4.547367 GGGCTCCGTTCCCCGATG 62.547 72.222 0.00 0.00 39.56 3.84
2968 3203 0.537371 CATAATGGGGCTCCGTTCCC 60.537 60.000 15.07 0.00 41.15 3.97
2969 3204 0.537371 CCATAATGGGGCTCCGTTCC 60.537 60.000 15.07 0.00 41.15 3.62
2970 3205 0.182775 ACCATAATGGGGCTCCGTTC 59.817 55.000 15.07 0.00 43.37 3.95
2971 3206 0.182775 GACCATAATGGGGCTCCGTT 59.817 55.000 16.04 16.04 43.37 4.44
2972 3207 1.705997 GGACCATAATGGGGCTCCGT 61.706 60.000 0.00 0.00 43.37 4.69
2973 3208 1.073199 GGACCATAATGGGGCTCCG 59.927 63.158 0.00 0.00 43.37 4.63
2974 3209 1.460699 GGGACCATAATGGGGCTCC 59.539 63.158 0.00 0.00 43.37 4.70
2988 3223 2.838637 TTGTTTATGGGGATGGGGAC 57.161 50.000 0.00 0.00 0.00 4.46
2989 3224 4.484270 AGTATTTGTTTATGGGGATGGGGA 59.516 41.667 0.00 0.00 0.00 4.81
2990 3225 4.814967 AGTATTTGTTTATGGGGATGGGG 58.185 43.478 0.00 0.00 0.00 4.96
2991 3226 5.454062 TGAGTATTTGTTTATGGGGATGGG 58.546 41.667 0.00 0.00 0.00 4.00
2992 3227 8.884124 ATATGAGTATTTGTTTATGGGGATGG 57.116 34.615 0.00 0.00 0.00 3.51
3025 3260 9.944376 GTATGTATGTTGATTATAGGGTGTCAT 57.056 33.333 0.00 0.00 0.00 3.06
3026 3261 8.929487 TGTATGTATGTTGATTATAGGGTGTCA 58.071 33.333 0.00 0.00 0.00 3.58
3027 3262 9.944376 ATGTATGTATGTTGATTATAGGGTGTC 57.056 33.333 0.00 0.00 0.00 3.67
3028 3263 9.725019 CATGTATGTATGTTGATTATAGGGTGT 57.275 33.333 0.00 0.00 0.00 4.16
3029 3264 9.166173 CCATGTATGTATGTTGATTATAGGGTG 57.834 37.037 0.00 0.00 0.00 4.61
3030 3265 8.890472 ACCATGTATGTATGTTGATTATAGGGT 58.110 33.333 0.00 0.00 0.00 4.34
3031 3266 9.166173 CACCATGTATGTATGTTGATTATAGGG 57.834 37.037 0.00 0.00 0.00 3.53
3032 3267 9.725019 ACACCATGTATGTATGTTGATTATAGG 57.275 33.333 0.00 0.00 0.00 2.57
3036 3271 8.898761 GGAAACACCATGTATGTATGTTGATTA 58.101 33.333 10.62 0.00 36.17 1.75
3037 3272 7.615365 AGGAAACACCATGTATGTATGTTGATT 59.385 33.333 10.62 0.00 42.04 2.57
3038 3273 7.118723 AGGAAACACCATGTATGTATGTTGAT 58.881 34.615 10.62 0.50 42.04 2.57
3039 3274 6.480763 AGGAAACACCATGTATGTATGTTGA 58.519 36.000 10.62 0.00 42.04 3.18
3040 3275 6.757897 AGGAAACACCATGTATGTATGTTG 57.242 37.500 10.62 0.00 42.04 3.33
3041 3276 6.719370 ACAAGGAAACACCATGTATGTATGTT 59.281 34.615 0.59 6.12 46.80 2.71
3042 3277 6.245408 ACAAGGAAACACCATGTATGTATGT 58.755 36.000 0.59 0.00 46.80 2.29
3043 3278 6.757897 ACAAGGAAACACCATGTATGTATG 57.242 37.500 0.59 0.00 46.80 2.39
3051 3286 1.270550 GCAGGACAAGGAAACACCATG 59.729 52.381 0.00 0.00 42.35 3.66
3052 3287 1.145738 AGCAGGACAAGGAAACACCAT 59.854 47.619 0.00 0.00 42.04 3.55
3053 3288 0.550914 AGCAGGACAAGGAAACACCA 59.449 50.000 0.00 0.00 42.04 4.17
3054 3289 2.561478 TAGCAGGACAAGGAAACACC 57.439 50.000 0.00 0.00 39.35 4.16
3055 3290 3.821033 ACATTAGCAGGACAAGGAAACAC 59.179 43.478 0.00 0.00 0.00 3.32
3056 3291 4.072131 GACATTAGCAGGACAAGGAAACA 58.928 43.478 0.00 0.00 0.00 2.83
3057 3292 4.327680 AGACATTAGCAGGACAAGGAAAC 58.672 43.478 0.00 0.00 0.00 2.78
3058 3293 4.640771 AGACATTAGCAGGACAAGGAAA 57.359 40.909 0.00 0.00 0.00 3.13
3059 3294 5.663106 AGATAGACATTAGCAGGACAAGGAA 59.337 40.000 0.00 0.00 0.00 3.36
3060 3295 5.211973 AGATAGACATTAGCAGGACAAGGA 58.788 41.667 0.00 0.00 0.00 3.36
3061 3296 5.543507 AGATAGACATTAGCAGGACAAGG 57.456 43.478 0.00 0.00 0.00 3.61
3062 3297 7.517614 TCTAGATAGACATTAGCAGGACAAG 57.482 40.000 0.00 0.00 0.00 3.16
3063 3298 7.094592 CGATCTAGATAGACATTAGCAGGACAA 60.095 40.741 4.89 0.00 34.72 3.18
3064 3299 6.372937 CGATCTAGATAGACATTAGCAGGACA 59.627 42.308 4.89 0.00 34.72 4.02
3065 3300 6.373216 ACGATCTAGATAGACATTAGCAGGAC 59.627 42.308 18.47 0.00 34.72 3.85
3066 3301 6.477253 ACGATCTAGATAGACATTAGCAGGA 58.523 40.000 18.47 0.00 34.72 3.86
3067 3302 6.751514 ACGATCTAGATAGACATTAGCAGG 57.248 41.667 18.47 0.00 34.72 4.85
3068 3303 9.715123 CAATACGATCTAGATAGACATTAGCAG 57.285 37.037 18.47 3.84 34.72 4.24
3069 3304 9.449719 TCAATACGATCTAGATAGACATTAGCA 57.550 33.333 18.47 4.17 34.72 3.49
3070 3305 9.710979 GTCAATACGATCTAGATAGACATTAGC 57.289 37.037 18.47 9.48 34.72 3.09
3074 3309 9.733556 AGAAGTCAATACGATCTAGATAGACAT 57.266 33.333 18.47 8.80 34.72 3.06
3075 3310 9.562408 AAGAAGTCAATACGATCTAGATAGACA 57.438 33.333 18.47 7.02 34.72 3.41
3076 3311 9.820229 CAAGAAGTCAATACGATCTAGATAGAC 57.180 37.037 18.47 12.65 34.72 2.59
3077 3312 9.004717 CCAAGAAGTCAATACGATCTAGATAGA 57.995 37.037 18.47 1.86 36.65 1.98
3078 3313 8.788806 ACCAAGAAGTCAATACGATCTAGATAG 58.211 37.037 4.89 8.35 0.00 2.08
3079 3314 8.693120 ACCAAGAAGTCAATACGATCTAGATA 57.307 34.615 4.89 0.00 0.00 1.98
3080 3315 7.285629 TGACCAAGAAGTCAATACGATCTAGAT 59.714 37.037 4.47 4.47 43.65 1.98
3081 3316 6.602009 TGACCAAGAAGTCAATACGATCTAGA 59.398 38.462 0.00 0.00 43.65 2.43
3082 3317 6.796426 TGACCAAGAAGTCAATACGATCTAG 58.204 40.000 0.00 0.00 43.65 2.43
3083 3318 6.769134 TGACCAAGAAGTCAATACGATCTA 57.231 37.500 0.00 0.00 43.65 1.98
3084 3319 5.661056 TGACCAAGAAGTCAATACGATCT 57.339 39.130 0.00 0.00 43.65 2.75
3094 3329 1.168714 GCCACCATGACCAAGAAGTC 58.831 55.000 0.00 0.00 37.28 3.01
3095 3330 0.478072 TGCCACCATGACCAAGAAGT 59.522 50.000 0.00 0.00 0.00 3.01
3096 3331 1.171308 CTGCCACCATGACCAAGAAG 58.829 55.000 0.00 0.00 0.00 2.85
3097 3332 0.895100 GCTGCCACCATGACCAAGAA 60.895 55.000 0.00 0.00 0.00 2.52
3098 3333 1.303561 GCTGCCACCATGACCAAGA 60.304 57.895 0.00 0.00 0.00 3.02
3099 3334 1.303888 AGCTGCCACCATGACCAAG 60.304 57.895 0.00 0.00 0.00 3.61
3100 3335 1.604308 CAGCTGCCACCATGACCAA 60.604 57.895 0.00 0.00 0.00 3.67
3101 3336 2.034532 CAGCTGCCACCATGACCA 59.965 61.111 0.00 0.00 0.00 4.02
3102 3337 1.748122 CTCAGCTGCCACCATGACC 60.748 63.158 9.47 0.00 0.00 4.02
3103 3338 1.748122 CCTCAGCTGCCACCATGAC 60.748 63.158 9.47 0.00 0.00 3.06
3104 3339 2.226315 ACCTCAGCTGCCACCATGA 61.226 57.895 9.47 0.00 0.00 3.07
3105 3340 2.044555 CACCTCAGCTGCCACCATG 61.045 63.158 9.47 0.00 0.00 3.66
3106 3341 2.194388 CTCACCTCAGCTGCCACCAT 62.194 60.000 9.47 0.00 0.00 3.55
3107 3342 2.848679 TCACCTCAGCTGCCACCA 60.849 61.111 9.47 0.00 0.00 4.17
3108 3343 2.046507 CTCACCTCAGCTGCCACC 60.047 66.667 9.47 0.00 0.00 4.61
3109 3344 1.908340 ATCCTCACCTCAGCTGCCAC 61.908 60.000 9.47 0.00 0.00 5.01
3110 3345 1.614525 ATCCTCACCTCAGCTGCCA 60.615 57.895 9.47 0.00 0.00 4.92
3111 3346 1.153208 CATCCTCACCTCAGCTGCC 60.153 63.158 9.47 0.00 0.00 4.85
3112 3347 0.743701 CACATCCTCACCTCAGCTGC 60.744 60.000 9.47 0.00 0.00 5.25
3113 3348 0.900421 TCACATCCTCACCTCAGCTG 59.100 55.000 7.63 7.63 0.00 4.24
3114 3349 1.193323 CTCACATCCTCACCTCAGCT 58.807 55.000 0.00 0.00 0.00 4.24
3115 3350 1.189752 TCTCACATCCTCACCTCAGC 58.810 55.000 0.00 0.00 0.00 4.26
3116 3351 3.573538 CCTATCTCACATCCTCACCTCAG 59.426 52.174 0.00 0.00 0.00 3.35
3117 3352 3.052566 ACCTATCTCACATCCTCACCTCA 60.053 47.826 0.00 0.00 0.00 3.86
3118 3353 3.571590 ACCTATCTCACATCCTCACCTC 58.428 50.000 0.00 0.00 0.00 3.85
3119 3354 3.697190 ACCTATCTCACATCCTCACCT 57.303 47.619 0.00 0.00 0.00 4.00
3120 3355 4.762289 AAACCTATCTCACATCCTCACC 57.238 45.455 0.00 0.00 0.00 4.02
3121 3356 6.127026 ACCTTAAACCTATCTCACATCCTCAC 60.127 42.308 0.00 0.00 0.00 3.51
3122 3357 5.964477 ACCTTAAACCTATCTCACATCCTCA 59.036 40.000 0.00 0.00 0.00 3.86
3123 3358 6.487299 ACCTTAAACCTATCTCACATCCTC 57.513 41.667 0.00 0.00 0.00 3.71
3124 3359 6.893020 AACCTTAAACCTATCTCACATCCT 57.107 37.500 0.00 0.00 0.00 3.24
3125 3360 7.939784 AAAACCTTAAACCTATCTCACATCC 57.060 36.000 0.00 0.00 0.00 3.51
3148 3383 6.258160 CGAAGACAAAAGAAGCTCTGAAAAA 58.742 36.000 0.00 0.00 0.00 1.94
3149 3384 5.730568 GCGAAGACAAAAGAAGCTCTGAAAA 60.731 40.000 0.00 0.00 0.00 2.29
3150 3385 4.260784 GCGAAGACAAAAGAAGCTCTGAAA 60.261 41.667 0.00 0.00 0.00 2.69
3151 3386 3.248602 GCGAAGACAAAAGAAGCTCTGAA 59.751 43.478 0.00 0.00 0.00 3.02
3152 3387 2.802816 GCGAAGACAAAAGAAGCTCTGA 59.197 45.455 0.00 0.00 0.00 3.27
3153 3388 2.545526 TGCGAAGACAAAAGAAGCTCTG 59.454 45.455 0.00 0.00 0.00 3.35
3154 3389 2.838736 TGCGAAGACAAAAGAAGCTCT 58.161 42.857 0.00 0.00 0.00 4.09
3155 3390 3.002759 ACTTGCGAAGACAAAAGAAGCTC 59.997 43.478 0.00 0.00 0.00 4.09
3156 3391 2.945668 ACTTGCGAAGACAAAAGAAGCT 59.054 40.909 3.37 0.00 0.00 3.74
3157 3392 3.340337 ACTTGCGAAGACAAAAGAAGC 57.660 42.857 3.37 0.00 0.00 3.86
3158 3393 5.095490 ACAAACTTGCGAAGACAAAAGAAG 58.905 37.500 3.37 0.00 0.00 2.85
3159 3394 5.054390 ACAAACTTGCGAAGACAAAAGAA 57.946 34.783 3.37 0.00 0.00 2.52
3160 3395 4.695217 ACAAACTTGCGAAGACAAAAGA 57.305 36.364 3.37 0.00 0.00 2.52
3161 3396 5.118510 ACAAACAAACTTGCGAAGACAAAAG 59.881 36.000 3.37 0.00 0.00 2.27
3162 3397 4.985409 ACAAACAAACTTGCGAAGACAAAA 59.015 33.333 3.37 0.00 0.00 2.44
3163 3398 4.384247 CACAAACAAACTTGCGAAGACAAA 59.616 37.500 3.37 0.00 0.00 2.83
3164 3399 3.917380 CACAAACAAACTTGCGAAGACAA 59.083 39.130 3.37 0.00 0.00 3.18
3165 3400 3.189495 TCACAAACAAACTTGCGAAGACA 59.811 39.130 3.37 0.00 0.00 3.41
3166 3401 3.753842 TCACAAACAAACTTGCGAAGAC 58.246 40.909 3.37 0.00 0.00 3.01
3167 3402 4.427096 TTCACAAACAAACTTGCGAAGA 57.573 36.364 3.37 0.00 0.00 2.87
3168 3403 6.991485 ATATTCACAAACAAACTTGCGAAG 57.009 33.333 0.00 0.00 32.51 3.79
3169 3404 7.763172 AAATATTCACAAACAAACTTGCGAA 57.237 28.000 0.00 0.00 33.27 4.70
3170 3405 7.763172 AAAATATTCACAAACAAACTTGCGA 57.237 28.000 0.00 0.00 0.00 5.10
3171 3406 9.566624 CTTAAAATATTCACAAACAAACTTGCG 57.433 29.630 0.00 0.00 0.00 4.85
3172 3407 9.862585 CCTTAAAATATTCACAAACAAACTTGC 57.137 29.630 0.00 0.00 0.00 4.01
3177 3412 8.831550 GCCAACCTTAAAATATTCACAAACAAA 58.168 29.630 0.00 0.00 0.00 2.83
3178 3413 8.207545 AGCCAACCTTAAAATATTCACAAACAA 58.792 29.630 0.00 0.00 0.00 2.83
3179 3414 7.655328 CAGCCAACCTTAAAATATTCACAAACA 59.345 33.333 0.00 0.00 0.00 2.83
3180 3415 7.655732 ACAGCCAACCTTAAAATATTCACAAAC 59.344 33.333 0.00 0.00 0.00 2.93
3181 3416 7.731054 ACAGCCAACCTTAAAATATTCACAAA 58.269 30.769 0.00 0.00 0.00 2.83
3182 3417 7.296628 ACAGCCAACCTTAAAATATTCACAA 57.703 32.000 0.00 0.00 0.00 3.33
3183 3418 6.909550 ACAGCCAACCTTAAAATATTCACA 57.090 33.333 0.00 0.00 0.00 3.58
3184 3419 8.051901 ACTACAGCCAACCTTAAAATATTCAC 57.948 34.615 0.00 0.00 0.00 3.18
3185 3420 9.914834 ATACTACAGCCAACCTTAAAATATTCA 57.085 29.630 0.00 0.00 0.00 2.57
3187 3422 9.914834 TGATACTACAGCCAACCTTAAAATATT 57.085 29.630 0.00 0.00 0.00 1.28
3188 3423 9.338622 GTGATACTACAGCCAACCTTAAAATAT 57.661 33.333 0.00 0.00 0.00 1.28
3189 3424 8.322828 TGTGATACTACAGCCAACCTTAAAATA 58.677 33.333 0.00 0.00 0.00 1.40
3190 3425 7.172342 TGTGATACTACAGCCAACCTTAAAAT 58.828 34.615 0.00 0.00 0.00 1.82
3191 3426 6.535540 TGTGATACTACAGCCAACCTTAAAA 58.464 36.000 0.00 0.00 0.00 1.52
3192 3427 6.116711 TGTGATACTACAGCCAACCTTAAA 57.883 37.500 0.00 0.00 0.00 1.52
3193 3428 5.730550 CTGTGATACTACAGCCAACCTTAA 58.269 41.667 0.00 0.00 41.31 1.85
3194 3429 5.339008 CTGTGATACTACAGCCAACCTTA 57.661 43.478 0.00 0.00 41.31 2.69
3195 3430 4.207891 CTGTGATACTACAGCCAACCTT 57.792 45.455 0.00 0.00 41.31 3.50
3196 3431 3.895232 CTGTGATACTACAGCCAACCT 57.105 47.619 0.00 0.00 41.31 3.50
3204 3439 5.357878 CCCGGTTAGTAACTGTGATACTACA 59.642 44.000 18.43 0.00 36.00 2.74
3205 3440 5.358160 ACCCGGTTAGTAACTGTGATACTAC 59.642 44.000 18.43 0.00 36.00 2.73
3206 3441 5.357878 CACCCGGTTAGTAACTGTGATACTA 59.642 44.000 18.43 0.00 35.34 1.82
3207 3442 4.159135 CACCCGGTTAGTAACTGTGATACT 59.841 45.833 18.43 0.00 37.39 2.12
3208 3443 4.158394 TCACCCGGTTAGTAACTGTGATAC 59.842 45.833 18.43 0.00 35.99 2.24
3209 3444 4.343231 TCACCCGGTTAGTAACTGTGATA 58.657 43.478 18.43 5.19 35.99 2.15
3210 3445 3.167485 TCACCCGGTTAGTAACTGTGAT 58.833 45.455 18.43 3.20 35.99 3.06
3211 3446 2.596346 TCACCCGGTTAGTAACTGTGA 58.404 47.619 18.43 19.33 35.99 3.58
3212 3447 3.389925 TTCACCCGGTTAGTAACTGTG 57.610 47.619 18.43 17.82 35.99 3.66
3213 3448 3.244318 CCTTTCACCCGGTTAGTAACTGT 60.244 47.826 18.43 8.76 35.99 3.55
3214 3449 3.332034 CCTTTCACCCGGTTAGTAACTG 58.668 50.000 14.03 14.03 37.52 3.16
3215 3450 2.303890 CCCTTTCACCCGGTTAGTAACT 59.696 50.000 12.65 0.00 0.00 2.24
3216 3451 2.703416 CCCTTTCACCCGGTTAGTAAC 58.297 52.381 0.00 4.32 0.00 2.50
3217 3452 1.003464 GCCCTTTCACCCGGTTAGTAA 59.997 52.381 0.00 0.00 0.00 2.24
3218 3453 0.614812 GCCCTTTCACCCGGTTAGTA 59.385 55.000 0.00 0.00 0.00 1.82
3219 3454 1.377612 GCCCTTTCACCCGGTTAGT 59.622 57.895 0.00 0.00 0.00 2.24
3220 3455 0.034477 ATGCCCTTTCACCCGGTTAG 60.034 55.000 0.00 0.00 0.00 2.34
3221 3456 0.406361 AATGCCCTTTCACCCGGTTA 59.594 50.000 0.00 0.00 0.00 2.85
3222 3457 0.471022 AAATGCCCTTTCACCCGGTT 60.471 50.000 0.00 0.00 0.00 4.44
3223 3458 0.898326 GAAATGCCCTTTCACCCGGT 60.898 55.000 0.00 0.00 42.42 5.28
3224 3459 1.604147 GGAAATGCCCTTTCACCCGG 61.604 60.000 0.00 0.00 44.29 5.73
3225 3460 1.890174 GGAAATGCCCTTTCACCCG 59.110 57.895 10.08 0.00 44.29 5.28
3235 3470 6.071051 TCCAAAACATAAAGTAGGGAAATGCC 60.071 38.462 0.00 0.00 0.00 4.40
3236 3471 6.930731 TCCAAAACATAAAGTAGGGAAATGC 58.069 36.000 0.00 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.