Multiple sequence alignment - TraesCS5A01G325800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G325800 chr5A 100.000 6883 0 0 1 6883 536297174 536290292 0.000000e+00 12711.0
1 TraesCS5A01G325800 chr5A 89.855 690 54 8 1 687 526381075 526380399 0.000000e+00 872.0
2 TraesCS5A01G325800 chr5A 85.714 483 50 8 3961 4443 536354637 536355100 6.200000e-135 492.0
3 TraesCS5A01G325800 chr5A 85.498 462 52 12 5372 5833 536364911 536364465 1.050000e-127 468.0
4 TraesCS5A01G325800 chr5A 85.906 149 21 0 5283 5431 536365472 536365620 7.150000e-35 159.0
5 TraesCS5A01G325800 chr5A 85.526 152 13 4 6096 6239 536365006 536365156 4.300000e-32 150.0
6 TraesCS5A01G325800 chr5A 83.186 113 19 0 3223 3335 651848364 651848252 3.400000e-18 104.0
7 TraesCS5A01G325800 chr5A 100.000 31 0 0 6853 6883 604717599 604717629 2.680000e-04 58.4
8 TraesCS5A01G325800 chr5B 93.677 3701 193 16 2684 6350 510403013 510399320 0.000000e+00 5500.0
9 TraesCS5A01G325800 chr5B 86.836 3631 415 42 2680 6273 510702496 510706100 0.000000e+00 3999.0
10 TraesCS5A01G325800 chr5B 91.530 1771 107 17 930 2683 510404828 510403084 0.000000e+00 2399.0
11 TraesCS5A01G325800 chr5B 88.807 1769 140 35 958 2688 510700659 510702407 0.000000e+00 2117.0
12 TraesCS5A01G325800 chr5B 87.773 687 59 13 3 687 695838849 695839512 0.000000e+00 780.0
13 TraesCS5A01G325800 chr5B 92.199 423 31 2 6437 6858 510398491 510398070 1.280000e-166 597.0
14 TraesCS5A01G325800 chr5B 86.649 367 46 1 3961 4327 510511696 510512059 2.990000e-108 403.0
15 TraesCS5A01G325800 chr5D 87.343 3579 408 31 2680 6227 423068314 423071878 0.000000e+00 4058.0
16 TraesCS5A01G325800 chr5D 89.200 1787 139 31 939 2688 423066456 423068225 0.000000e+00 2182.0
17 TraesCS5A01G325800 chr5D 85.324 293 28 4 6580 6858 422941984 422941693 8.730000e-74 289.0
18 TraesCS5A01G325800 chr5D 79.144 187 21 6 4257 4443 422942282 422942114 5.640000e-21 113.0
19 TraesCS5A01G325800 chr5D 80.531 113 22 0 3223 3335 525477290 525477178 3.420000e-13 87.9
20 TraesCS5A01G325800 chr7D 76.693 1802 334 48 2786 4511 8351354 8353145 0.000000e+00 922.0
21 TraesCS5A01G325800 chr7A 90.365 685 63 2 1 682 19051294 19051978 0.000000e+00 896.0
22 TraesCS5A01G325800 chr7A 88.133 691 65 8 1 688 32167710 32167034 0.000000e+00 806.0
23 TraesCS5A01G325800 chr7A 78.694 1164 226 17 2786 3929 2699043 2697882 0.000000e+00 756.0
24 TraesCS5A01G325800 chr7A 78.115 1220 227 27 2786 3970 8785827 8787041 0.000000e+00 737.0
25 TraesCS5A01G325800 chr7A 76.248 1482 295 37 2786 4216 9005309 9003834 0.000000e+00 734.0
26 TraesCS5A01G325800 chr4D 89.840 689 50 9 1 687 342521784 342521114 0.000000e+00 867.0
27 TraesCS5A01G325800 chr4D 100.000 29 0 0 6855 6883 49803784 49803756 3.000000e-03 54.7
28 TraesCS5A01G325800 chr4D 96.875 32 1 0 6852 6883 296700906 296700937 3.000000e-03 54.7
29 TraesCS5A01G325800 chr2A 88.227 688 73 7 3 685 656963430 656964114 0.000000e+00 815.0
30 TraesCS5A01G325800 chr2A 88.623 668 56 3 1 667 49337423 49338071 0.000000e+00 795.0
31 TraesCS5A01G325800 chr2A 100.000 32 0 0 6852 6883 636058790 636058759 7.460000e-05 60.2
32 TraesCS5A01G325800 chr2A 92.308 39 3 0 6845 6883 744724405 744724367 1.000000e-03 56.5
33 TraesCS5A01G325800 chr4A 78.407 1218 229 17 2786 3971 728507969 728509184 0.000000e+00 761.0
34 TraesCS5A01G325800 chr4A 76.218 1190 254 19 2763 3929 739867612 739868795 2.750000e-168 603.0
35 TraesCS5A01G325800 chr4A 76.676 1089 232 16 2786 3863 741020273 741021350 9.950000e-163 584.0
36 TraesCS5A01G325800 chr4A 100.000 31 0 0 6853 6883 176544764 176544734 2.680000e-04 58.4
37 TraesCS5A01G325800 chr4A 94.737 38 1 1 6846 6883 624982281 624982245 2.680000e-04 58.4
38 TraesCS5A01G325800 chr3A 87.153 685 63 14 1 682 531664125 531664787 0.000000e+00 754.0
39 TraesCS5A01G325800 chr3A 100.000 31 0 0 6853 6883 638441796 638441766 2.680000e-04 58.4
40 TraesCS5A01G325800 chr3A 96.970 33 1 0 6851 6883 311448301 311448333 1.000000e-03 56.5
41 TraesCS5A01G325800 chr3B 86.938 689 66 9 1 682 820186628 820187299 0.000000e+00 752.0
42 TraesCS5A01G325800 chrUn 91.667 216 15 3 475 689 345243351 345243138 5.220000e-76 296.0
43 TraesCS5A01G325800 chr6A 100.000 31 0 0 6853 6883 256571562 256571532 2.680000e-04 58.4
44 TraesCS5A01G325800 chr6A 100.000 29 0 0 6855 6883 390650674 390650646 3.000000e-03 54.7
45 TraesCS5A01G325800 chr6A 100.000 29 0 0 6855 6883 393292658 393292630 3.000000e-03 54.7
46 TraesCS5A01G325800 chr6D 100.000 29 0 0 6855 6883 141277163 141277191 3.000000e-03 54.7
47 TraesCS5A01G325800 chr6D 100.000 29 0 0 6855 6883 141278041 141278013 3.000000e-03 54.7
48 TraesCS5A01G325800 chr3D 100.000 29 0 0 6855 6883 51690031 51690059 3.000000e-03 54.7
49 TraesCS5A01G325800 chr3D 100.000 29 0 0 6855 6883 51690916 51690888 3.000000e-03 54.7
50 TraesCS5A01G325800 chr3D 100.000 29 0 0 6855 6883 55352998 55353026 3.000000e-03 54.7
51 TraesCS5A01G325800 chr3D 100.000 29 0 0 6855 6883 411075641 411075669 3.000000e-03 54.7
52 TraesCS5A01G325800 chr3D 100.000 29 0 0 6855 6883 411076387 411076359 3.000000e-03 54.7
53 TraesCS5A01G325800 chr2B 96.970 33 0 1 6852 6883 729630906 729630938 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G325800 chr5A 536290292 536297174 6882 True 12711 12711 100.000000 1 6883 1 chr5A.!!$R2 6882
1 TraesCS5A01G325800 chr5A 526380399 526381075 676 True 872 872 89.855000 1 687 1 chr5A.!!$R1 686
2 TraesCS5A01G325800 chr5B 510700659 510706100 5441 False 3058 3999 87.821500 958 6273 2 chr5B.!!$F3 5315
3 TraesCS5A01G325800 chr5B 510398070 510404828 6758 True 2832 5500 92.468667 930 6858 3 chr5B.!!$R1 5928
4 TraesCS5A01G325800 chr5B 695838849 695839512 663 False 780 780 87.773000 3 687 1 chr5B.!!$F2 684
5 TraesCS5A01G325800 chr5D 423066456 423071878 5422 False 3120 4058 88.271500 939 6227 2 chr5D.!!$F1 5288
6 TraesCS5A01G325800 chr5D 422941693 422942282 589 True 201 289 82.234000 4257 6858 2 chr5D.!!$R2 2601
7 TraesCS5A01G325800 chr7D 8351354 8353145 1791 False 922 922 76.693000 2786 4511 1 chr7D.!!$F1 1725
8 TraesCS5A01G325800 chr7A 19051294 19051978 684 False 896 896 90.365000 1 682 1 chr7A.!!$F2 681
9 TraesCS5A01G325800 chr7A 32167034 32167710 676 True 806 806 88.133000 1 688 1 chr7A.!!$R3 687
10 TraesCS5A01G325800 chr7A 2697882 2699043 1161 True 756 756 78.694000 2786 3929 1 chr7A.!!$R1 1143
11 TraesCS5A01G325800 chr7A 8785827 8787041 1214 False 737 737 78.115000 2786 3970 1 chr7A.!!$F1 1184
12 TraesCS5A01G325800 chr7A 9003834 9005309 1475 True 734 734 76.248000 2786 4216 1 chr7A.!!$R2 1430
13 TraesCS5A01G325800 chr4D 342521114 342521784 670 True 867 867 89.840000 1 687 1 chr4D.!!$R2 686
14 TraesCS5A01G325800 chr2A 656963430 656964114 684 False 815 815 88.227000 3 685 1 chr2A.!!$F2 682
15 TraesCS5A01G325800 chr2A 49337423 49338071 648 False 795 795 88.623000 1 667 1 chr2A.!!$F1 666
16 TraesCS5A01G325800 chr4A 728507969 728509184 1215 False 761 761 78.407000 2786 3971 1 chr4A.!!$F1 1185
17 TraesCS5A01G325800 chr4A 739867612 739868795 1183 False 603 603 76.218000 2763 3929 1 chr4A.!!$F2 1166
18 TraesCS5A01G325800 chr4A 741020273 741021350 1077 False 584 584 76.676000 2786 3863 1 chr4A.!!$F3 1077
19 TraesCS5A01G325800 chr3A 531664125 531664787 662 False 754 754 87.153000 1 682 1 chr3A.!!$F2 681
20 TraesCS5A01G325800 chr3B 820186628 820187299 671 False 752 752 86.938000 1 682 1 chr3B.!!$F1 681

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
899 910 0.030235 GTTTCGTCCCACTGTTTGCC 59.970 55.000 0.00 0.0 0.00 4.52 F
2017 2074 0.098376 GACGTAGATTCGTGTCCGCT 59.902 55.000 0.00 0.0 44.21 5.52 F
2421 2484 0.328258 GGTGAAGCCAAGCCCTTCTA 59.672 55.000 0.00 0.0 39.47 2.10 F
2912 3090 1.608590 ACACAAATGGAAGAGGTTGCG 59.391 47.619 0.00 0.0 0.00 4.85 F
4117 4361 0.846693 CTAGCCCTGGTTAATGGCCT 59.153 55.000 3.32 0.0 46.55 5.19 F
4759 5015 0.680061 GTTGTGGAGGAAGACCGAGT 59.320 55.000 0.00 0.0 41.83 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2026 2083 0.108329 CTCCATACGGCGTTGGAAGT 60.108 55.000 29.76 7.17 41.36 3.01 R
3739 3947 1.004277 TCCCAGTGAGGTTTATGGTGC 59.996 52.381 0.00 0.00 34.66 5.01 R
4067 4311 1.489481 TGCCATGTCCTGAGAGTAGG 58.511 55.000 0.00 0.00 39.29 3.18 R
4666 4922 0.877071 CACCAACTGCACACTGATCC 59.123 55.000 0.00 0.00 0.00 3.36 R
5864 6126 0.826715 ACTAGTGCCATGCAGACGAT 59.173 50.000 0.00 0.00 40.08 3.73 R
6578 7615 0.231024 CACGTTCACGCATTTGTCGA 59.769 50.000 0.00 0.00 44.43 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 52 0.035458 AGTGGCCTTGAACTTCTCCG 59.965 55.000 3.32 0.00 0.00 4.63
87 90 0.613260 AGGGAACAACGCAGATAGCA 59.387 50.000 0.00 0.00 46.13 3.49
96 99 2.584064 CAGATAGCACCGCCACCA 59.416 61.111 0.00 0.00 0.00 4.17
97 100 1.146930 CAGATAGCACCGCCACCAT 59.853 57.895 0.00 0.00 0.00 3.55
220 223 4.147449 TGGAGCACCGGCAGATCG 62.147 66.667 0.00 0.00 44.61 3.69
256 259 4.592192 CGCATCCAGATCGCCGGT 62.592 66.667 1.90 0.00 0.00 5.28
436 439 0.606401 CCACGCACACCAGGAGAAAT 60.606 55.000 0.00 0.00 0.00 2.17
440 443 0.955428 GCACACCAGGAGAAATCGCA 60.955 55.000 0.00 0.00 0.00 5.10
551 562 2.683933 AAGAGATCCCGCCACCGT 60.684 61.111 0.00 0.00 0.00 4.83
624 635 4.437587 GTCGGGGGAGGGACGAGA 62.438 72.222 0.00 0.00 37.30 4.04
626 637 2.682494 CGGGGGAGGGACGAGAAA 60.682 66.667 0.00 0.00 0.00 2.52
634 645 4.430765 GGACGAGAAAGCGGCGGA 62.431 66.667 9.78 0.00 41.12 5.54
682 693 2.643272 GCGACACGTGAGGAGTCA 59.357 61.111 25.01 0.00 39.31 3.41
688 699 0.609406 CACGTGAGGAGTCAGGAGGA 60.609 60.000 10.90 0.00 40.41 3.71
689 700 0.333312 ACGTGAGGAGTCAGGAGGAT 59.667 55.000 2.30 0.00 40.41 3.24
690 701 1.564818 ACGTGAGGAGTCAGGAGGATA 59.435 52.381 2.30 0.00 40.41 2.59
691 702 2.025226 ACGTGAGGAGTCAGGAGGATAA 60.025 50.000 2.30 0.00 40.41 1.75
692 703 3.024547 CGTGAGGAGTCAGGAGGATAAA 58.975 50.000 0.00 0.00 40.41 1.40
693 704 3.067461 CGTGAGGAGTCAGGAGGATAAAG 59.933 52.174 0.00 0.00 40.41 1.85
694 705 4.282496 GTGAGGAGTCAGGAGGATAAAGA 58.718 47.826 0.00 0.00 31.53 2.52
695 706 4.340950 GTGAGGAGTCAGGAGGATAAAGAG 59.659 50.000 0.00 0.00 31.53 2.85
696 707 4.017037 TGAGGAGTCAGGAGGATAAAGAGT 60.017 45.833 0.00 0.00 0.00 3.24
697 708 4.542697 AGGAGTCAGGAGGATAAAGAGTC 58.457 47.826 0.00 0.00 0.00 3.36
698 709 3.316868 GGAGTCAGGAGGATAAAGAGTCG 59.683 52.174 0.00 0.00 31.15 4.18
699 710 3.949113 GAGTCAGGAGGATAAAGAGTCGT 59.051 47.826 0.00 0.00 0.00 4.34
700 711 3.697045 AGTCAGGAGGATAAAGAGTCGTG 59.303 47.826 0.00 0.00 0.00 4.35
701 712 3.444388 GTCAGGAGGATAAAGAGTCGTGT 59.556 47.826 0.00 0.00 0.00 4.49
702 713 3.695060 TCAGGAGGATAAAGAGTCGTGTC 59.305 47.826 0.00 0.00 0.00 3.67
703 714 3.025262 AGGAGGATAAAGAGTCGTGTCC 58.975 50.000 4.98 4.98 0.00 4.02
704 715 2.101082 GGAGGATAAAGAGTCGTGTCCC 59.899 54.545 8.43 0.00 0.00 4.46
705 716 3.025262 GAGGATAAAGAGTCGTGTCCCT 58.975 50.000 8.43 3.37 0.00 4.20
706 717 3.025262 AGGATAAAGAGTCGTGTCCCTC 58.975 50.000 8.43 0.00 0.00 4.30
707 718 2.223525 GGATAAAGAGTCGTGTCCCTCG 60.224 54.545 2.42 0.00 32.88 4.63
708 719 1.171308 TAAAGAGTCGTGTCCCTCGG 58.829 55.000 0.00 0.00 32.88 4.63
709 720 0.538977 AAAGAGTCGTGTCCCTCGGA 60.539 55.000 0.00 0.00 32.88 4.55
710 721 0.323542 AAGAGTCGTGTCCCTCGGAT 60.324 55.000 0.00 0.00 32.73 4.18
711 722 1.032657 AGAGTCGTGTCCCTCGGATG 61.033 60.000 0.00 0.00 32.73 3.51
712 723 1.304217 AGTCGTGTCCCTCGGATGT 60.304 57.895 0.00 0.00 32.73 3.06
713 724 1.153823 GTCGTGTCCCTCGGATGTG 60.154 63.158 0.00 0.00 32.73 3.21
714 725 1.605451 TCGTGTCCCTCGGATGTGT 60.605 57.895 0.00 0.00 32.73 3.72
715 726 1.446099 CGTGTCCCTCGGATGTGTG 60.446 63.158 0.00 0.00 32.73 3.82
716 727 1.671742 GTGTCCCTCGGATGTGTGT 59.328 57.895 0.00 0.00 32.73 3.72
717 728 0.670546 GTGTCCCTCGGATGTGTGTG 60.671 60.000 0.00 0.00 32.73 3.82
718 729 1.118965 TGTCCCTCGGATGTGTGTGT 61.119 55.000 0.00 0.00 32.73 3.72
719 730 0.670546 GTCCCTCGGATGTGTGTGTG 60.671 60.000 0.00 0.00 32.73 3.82
720 731 1.375908 CCCTCGGATGTGTGTGTGG 60.376 63.158 0.00 0.00 0.00 4.17
721 732 1.671166 CCTCGGATGTGTGTGTGGA 59.329 57.895 0.00 0.00 0.00 4.02
722 733 0.670546 CCTCGGATGTGTGTGTGGAC 60.671 60.000 0.00 0.00 0.00 4.02
723 734 0.318441 CTCGGATGTGTGTGTGGACT 59.682 55.000 0.00 0.00 0.00 3.85
724 735 0.317160 TCGGATGTGTGTGTGGACTC 59.683 55.000 0.00 0.00 0.00 3.36
725 736 0.318441 CGGATGTGTGTGTGGACTCT 59.682 55.000 0.00 0.00 0.00 3.24
726 737 1.800805 GGATGTGTGTGTGGACTCTG 58.199 55.000 0.00 0.00 0.00 3.35
727 738 1.151668 GATGTGTGTGTGGACTCTGC 58.848 55.000 0.00 0.00 0.00 4.26
728 739 0.250467 ATGTGTGTGTGGACTCTGCC 60.250 55.000 0.00 0.00 0.00 4.85
729 740 1.337384 TGTGTGTGTGGACTCTGCCT 61.337 55.000 0.00 0.00 0.00 4.75
730 741 0.679505 GTGTGTGTGGACTCTGCCTA 59.320 55.000 0.00 0.00 0.00 3.93
731 742 1.276421 GTGTGTGTGGACTCTGCCTAT 59.724 52.381 0.00 0.00 0.00 2.57
732 743 1.550524 TGTGTGTGGACTCTGCCTATC 59.449 52.381 0.00 0.00 0.00 2.08
733 744 1.550524 GTGTGTGGACTCTGCCTATCA 59.449 52.381 0.00 0.00 0.00 2.15
734 745 1.827344 TGTGTGGACTCTGCCTATCAG 59.173 52.381 0.00 0.00 44.21 2.90
766 777 4.346734 AAAAAGTGCAGCGAGATATGTG 57.653 40.909 0.00 0.00 0.00 3.21
767 778 1.945387 AAGTGCAGCGAGATATGTGG 58.055 50.000 0.00 0.00 0.00 4.17
768 779 0.105593 AGTGCAGCGAGATATGTGGG 59.894 55.000 0.00 0.00 0.00 4.61
769 780 0.882042 GTGCAGCGAGATATGTGGGG 60.882 60.000 0.00 0.00 0.00 4.96
770 781 1.048160 TGCAGCGAGATATGTGGGGA 61.048 55.000 0.00 0.00 0.00 4.81
771 782 0.322975 GCAGCGAGATATGTGGGGAT 59.677 55.000 0.00 0.00 0.00 3.85
772 783 1.271054 GCAGCGAGATATGTGGGGATT 60.271 52.381 0.00 0.00 0.00 3.01
773 784 2.811873 GCAGCGAGATATGTGGGGATTT 60.812 50.000 0.00 0.00 0.00 2.17
774 785 3.557054 GCAGCGAGATATGTGGGGATTTA 60.557 47.826 0.00 0.00 0.00 1.40
775 786 4.248859 CAGCGAGATATGTGGGGATTTAG 58.751 47.826 0.00 0.00 0.00 1.85
776 787 3.261897 AGCGAGATATGTGGGGATTTAGG 59.738 47.826 0.00 0.00 0.00 2.69
777 788 3.260884 GCGAGATATGTGGGGATTTAGGA 59.739 47.826 0.00 0.00 0.00 2.94
778 789 4.621747 GCGAGATATGTGGGGATTTAGGAG 60.622 50.000 0.00 0.00 0.00 3.69
779 790 4.528596 CGAGATATGTGGGGATTTAGGAGT 59.471 45.833 0.00 0.00 0.00 3.85
780 791 5.012148 CGAGATATGTGGGGATTTAGGAGTT 59.988 44.000 0.00 0.00 0.00 3.01
781 792 6.464465 CGAGATATGTGGGGATTTAGGAGTTT 60.464 42.308 0.00 0.00 0.00 2.66
782 793 6.605119 AGATATGTGGGGATTTAGGAGTTTG 58.395 40.000 0.00 0.00 0.00 2.93
783 794 4.946160 ATGTGGGGATTTAGGAGTTTGA 57.054 40.909 0.00 0.00 0.00 2.69
784 795 4.028993 TGTGGGGATTTAGGAGTTTGAC 57.971 45.455 0.00 0.00 0.00 3.18
785 796 3.245122 TGTGGGGATTTAGGAGTTTGACC 60.245 47.826 0.00 0.00 0.00 4.02
786 797 2.026636 TGGGGATTTAGGAGTTTGACCG 60.027 50.000 0.00 0.00 0.00 4.79
787 798 2.640184 GGGATTTAGGAGTTTGACCGG 58.360 52.381 0.00 0.00 0.00 5.28
788 799 2.640184 GGATTTAGGAGTTTGACCGGG 58.360 52.381 6.32 0.00 0.00 5.73
789 800 2.237893 GGATTTAGGAGTTTGACCGGGA 59.762 50.000 6.32 0.00 0.00 5.14
790 801 3.118000 GGATTTAGGAGTTTGACCGGGAT 60.118 47.826 6.32 0.00 0.00 3.85
791 802 4.102054 GGATTTAGGAGTTTGACCGGGATA 59.898 45.833 6.32 0.00 0.00 2.59
792 803 5.397109 GGATTTAGGAGTTTGACCGGGATAA 60.397 44.000 6.32 0.00 0.00 1.75
793 804 5.703730 TTTAGGAGTTTGACCGGGATAAT 57.296 39.130 6.32 0.00 0.00 1.28
794 805 3.840124 AGGAGTTTGACCGGGATAATC 57.160 47.619 6.32 0.00 0.00 1.75
795 806 2.438392 AGGAGTTTGACCGGGATAATCC 59.562 50.000 6.32 6.45 35.23 3.01
796 807 2.438392 GGAGTTTGACCGGGATAATCCT 59.562 50.000 6.32 0.00 36.57 3.24
797 808 3.494573 GGAGTTTGACCGGGATAATCCTC 60.495 52.174 6.32 6.37 36.57 3.71
798 809 2.102588 AGTTTGACCGGGATAATCCTCG 59.897 50.000 6.32 0.00 36.57 4.63
799 810 1.784358 TTGACCGGGATAATCCTCGT 58.216 50.000 6.32 0.00 36.57 4.18
800 811 1.325355 TGACCGGGATAATCCTCGTC 58.675 55.000 6.32 0.00 36.57 4.20
801 812 1.325355 GACCGGGATAATCCTCGTCA 58.675 55.000 6.32 0.00 35.79 4.35
802 813 1.684983 GACCGGGATAATCCTCGTCAA 59.315 52.381 6.32 0.00 35.79 3.18
803 814 2.299297 GACCGGGATAATCCTCGTCAAT 59.701 50.000 6.32 0.00 35.79 2.57
804 815 2.704065 ACCGGGATAATCCTCGTCAATT 59.296 45.455 6.32 0.00 36.57 2.32
805 816 3.135895 ACCGGGATAATCCTCGTCAATTT 59.864 43.478 6.32 0.00 36.57 1.82
806 817 3.746492 CCGGGATAATCCTCGTCAATTTC 59.254 47.826 0.00 0.00 36.57 2.17
807 818 3.746492 CGGGATAATCCTCGTCAATTTCC 59.254 47.826 0.00 0.00 36.57 3.13
808 819 4.503296 CGGGATAATCCTCGTCAATTTCCT 60.503 45.833 0.00 0.00 36.57 3.36
809 820 5.279306 CGGGATAATCCTCGTCAATTTCCTA 60.279 44.000 0.00 0.00 36.57 2.94
810 821 6.531021 GGGATAATCCTCGTCAATTTCCTAA 58.469 40.000 0.00 0.00 36.57 2.69
811 822 6.996282 GGGATAATCCTCGTCAATTTCCTAAA 59.004 38.462 0.00 0.00 36.57 1.85
812 823 7.501225 GGGATAATCCTCGTCAATTTCCTAAAA 59.499 37.037 0.00 0.00 36.57 1.52
813 824 9.067986 GGATAATCCTCGTCAATTTCCTAAAAT 57.932 33.333 0.00 0.00 33.29 1.82
816 827 6.897259 TCCTCGTCAATTTCCTAAAATACG 57.103 37.500 0.00 0.00 37.82 3.06
817 828 5.292589 TCCTCGTCAATTTCCTAAAATACGC 59.707 40.000 0.00 0.00 37.03 4.42
818 829 5.293569 CCTCGTCAATTTCCTAAAATACGCT 59.706 40.000 0.00 0.00 37.03 5.07
819 830 6.477688 CCTCGTCAATTTCCTAAAATACGCTA 59.522 38.462 0.00 0.00 37.03 4.26
820 831 7.306632 CCTCGTCAATTTCCTAAAATACGCTAG 60.307 40.741 0.00 0.00 37.03 3.42
821 832 7.037438 TCGTCAATTTCCTAAAATACGCTAGT 58.963 34.615 0.00 0.00 37.03 2.57
822 833 8.190122 TCGTCAATTTCCTAAAATACGCTAGTA 58.810 33.333 0.00 0.00 37.03 1.82
823 834 8.264632 CGTCAATTTCCTAAAATACGCTAGTAC 58.735 37.037 0.00 0.00 32.92 2.73
824 835 8.546244 GTCAATTTCCTAAAATACGCTAGTACC 58.454 37.037 0.00 0.00 33.93 3.34
825 836 8.259411 TCAATTTCCTAAAATACGCTAGTACCA 58.741 33.333 0.00 0.00 33.93 3.25
826 837 8.885722 CAATTTCCTAAAATACGCTAGTACCAA 58.114 33.333 0.00 0.00 33.93 3.67
827 838 9.452287 AATTTCCTAAAATACGCTAGTACCAAA 57.548 29.630 0.00 0.00 33.93 3.28
828 839 7.832503 TTCCTAAAATACGCTAGTACCAAAC 57.167 36.000 0.00 0.00 35.39 2.93
829 840 6.934056 TCCTAAAATACGCTAGTACCAAACA 58.066 36.000 0.00 0.00 35.39 2.83
830 841 7.385267 TCCTAAAATACGCTAGTACCAAACAA 58.615 34.615 0.00 0.00 35.39 2.83
831 842 7.877097 TCCTAAAATACGCTAGTACCAAACAAA 59.123 33.333 0.00 0.00 35.39 2.83
832 843 8.173130 CCTAAAATACGCTAGTACCAAACAAAG 58.827 37.037 0.00 0.00 35.39 2.77
833 844 5.541098 AATACGCTAGTACCAAACAAAGC 57.459 39.130 0.00 0.00 35.39 3.51
834 845 2.148768 ACGCTAGTACCAAACAAAGCC 58.851 47.619 0.00 0.00 36.50 4.35
835 846 2.224450 ACGCTAGTACCAAACAAAGCCT 60.224 45.455 0.00 0.00 36.50 4.58
836 847 2.812011 CGCTAGTACCAAACAAAGCCTT 59.188 45.455 0.00 0.00 36.50 4.35
837 848 3.998341 CGCTAGTACCAAACAAAGCCTTA 59.002 43.478 0.00 0.00 36.50 2.69
838 849 4.092968 CGCTAGTACCAAACAAAGCCTTAG 59.907 45.833 0.00 0.00 36.50 2.18
839 850 4.395231 GCTAGTACCAAACAAAGCCTTAGG 59.605 45.833 0.00 0.00 34.78 2.69
840 851 3.763057 AGTACCAAACAAAGCCTTAGGG 58.237 45.455 0.00 0.00 0.00 3.53
841 852 2.767644 ACCAAACAAAGCCTTAGGGT 57.232 45.000 0.00 0.00 33.45 4.34
842 853 3.040655 ACCAAACAAAGCCTTAGGGTT 57.959 42.857 10.22 10.22 46.01 4.11
854 865 5.525484 AGCCTTAGGGTTTAATTTTAGGGG 58.475 41.667 0.00 0.00 34.45 4.79
855 866 5.016998 AGCCTTAGGGTTTAATTTTAGGGGT 59.983 40.000 0.00 0.00 34.45 4.95
856 867 5.722923 GCCTTAGGGTTTAATTTTAGGGGTT 59.277 40.000 0.00 0.00 34.45 4.11
857 868 6.214005 GCCTTAGGGTTTAATTTTAGGGGTTT 59.786 38.462 0.00 0.00 34.45 3.27
858 869 7.617225 CCTTAGGGTTTAATTTTAGGGGTTTG 58.383 38.462 0.00 0.00 0.00 2.93
859 870 5.492855 AGGGTTTAATTTTAGGGGTTTGC 57.507 39.130 0.00 0.00 0.00 3.68
860 871 5.159637 AGGGTTTAATTTTAGGGGTTTGCT 58.840 37.500 0.00 0.00 0.00 3.91
861 872 6.324544 AGGGTTTAATTTTAGGGGTTTGCTA 58.675 36.000 0.00 0.00 0.00 3.49
862 873 6.439375 AGGGTTTAATTTTAGGGGTTTGCTAG 59.561 38.462 0.00 0.00 0.00 3.42
863 874 6.438108 GGGTTTAATTTTAGGGGTTTGCTAGA 59.562 38.462 0.00 0.00 0.00 2.43
864 875 7.363530 GGGTTTAATTTTAGGGGTTTGCTAGAG 60.364 40.741 0.00 0.00 0.00 2.43
865 876 7.177921 GGTTTAATTTTAGGGGTTTGCTAGAGT 59.822 37.037 0.00 0.00 0.00 3.24
866 877 8.582437 GTTTAATTTTAGGGGTTTGCTAGAGTT 58.418 33.333 0.00 0.00 0.00 3.01
867 878 6.590234 AATTTTAGGGGTTTGCTAGAGTTG 57.410 37.500 0.00 0.00 0.00 3.16
868 879 3.713826 TTAGGGGTTTGCTAGAGTTGG 57.286 47.619 0.00 0.00 0.00 3.77
869 880 1.446016 AGGGGTTTGCTAGAGTTGGT 58.554 50.000 0.00 0.00 0.00 3.67
870 881 1.351350 AGGGGTTTGCTAGAGTTGGTC 59.649 52.381 0.00 0.00 0.00 4.02
871 882 1.351350 GGGGTTTGCTAGAGTTGGTCT 59.649 52.381 0.00 0.00 39.59 3.85
872 883 2.224793 GGGGTTTGCTAGAGTTGGTCTT 60.225 50.000 0.00 0.00 36.64 3.01
873 884 3.008704 GGGGTTTGCTAGAGTTGGTCTTA 59.991 47.826 0.00 0.00 36.64 2.10
874 885 4.001652 GGGTTTGCTAGAGTTGGTCTTAC 58.998 47.826 0.00 0.00 36.64 2.34
875 886 3.678548 GGTTTGCTAGAGTTGGTCTTACG 59.321 47.826 0.00 0.00 36.64 3.18
876 887 3.587797 TTGCTAGAGTTGGTCTTACGG 57.412 47.619 0.00 0.00 36.64 4.02
877 888 1.203994 TGCTAGAGTTGGTCTTACGGC 59.796 52.381 0.00 0.00 36.64 5.68
878 889 1.471153 GCTAGAGTTGGTCTTACGGCC 60.471 57.143 0.00 0.00 36.64 6.13
879 890 2.100989 CTAGAGTTGGTCTTACGGCCT 58.899 52.381 0.00 0.00 36.64 5.19
880 891 0.608640 AGAGTTGGTCTTACGGCCTG 59.391 55.000 0.00 0.00 27.07 4.85
881 892 0.320697 GAGTTGGTCTTACGGCCTGT 59.679 55.000 0.00 2.95 0.00 4.00
882 893 0.763035 AGTTGGTCTTACGGCCTGTT 59.237 50.000 0.00 0.00 0.00 3.16
883 894 1.142262 AGTTGGTCTTACGGCCTGTTT 59.858 47.619 0.00 0.00 0.00 2.83
884 895 1.534163 GTTGGTCTTACGGCCTGTTTC 59.466 52.381 0.00 0.00 0.00 2.78
885 896 0.320073 TGGTCTTACGGCCTGTTTCG 60.320 55.000 0.00 0.00 0.00 3.46
886 897 0.320160 GGTCTTACGGCCTGTTTCGT 60.320 55.000 0.00 0.00 42.55 3.85
887 898 1.066136 GTCTTACGGCCTGTTTCGTC 58.934 55.000 0.00 0.00 40.31 4.20
888 899 0.037975 TCTTACGGCCTGTTTCGTCC 60.038 55.000 0.00 0.00 40.31 4.79
889 900 1.004679 TTACGGCCTGTTTCGTCCC 60.005 57.895 0.00 0.00 40.31 4.46
890 901 1.756408 TTACGGCCTGTTTCGTCCCA 61.756 55.000 0.00 0.00 40.31 4.37
891 902 2.438951 TACGGCCTGTTTCGTCCCAC 62.439 60.000 0.00 0.00 40.31 4.61
892 903 2.430367 GGCCTGTTTCGTCCCACT 59.570 61.111 0.00 0.00 0.00 4.00
893 904 1.966451 GGCCTGTTTCGTCCCACTG 60.966 63.158 0.00 0.00 0.00 3.66
894 905 1.227853 GCCTGTTTCGTCCCACTGT 60.228 57.895 0.00 0.00 0.00 3.55
895 906 0.818040 GCCTGTTTCGTCCCACTGTT 60.818 55.000 0.00 0.00 0.00 3.16
896 907 1.675552 CCTGTTTCGTCCCACTGTTT 58.324 50.000 0.00 0.00 0.00 2.83
897 908 1.333619 CCTGTTTCGTCCCACTGTTTG 59.666 52.381 0.00 0.00 0.00 2.93
898 909 0.736053 TGTTTCGTCCCACTGTTTGC 59.264 50.000 0.00 0.00 0.00 3.68
899 910 0.030235 GTTTCGTCCCACTGTTTGCC 59.970 55.000 0.00 0.00 0.00 4.52
900 911 1.104577 TTTCGTCCCACTGTTTGCCC 61.105 55.000 0.00 0.00 0.00 5.36
901 912 2.969300 TTCGTCCCACTGTTTGCCCC 62.969 60.000 0.00 0.00 0.00 5.80
902 913 2.600470 GTCCCACTGTTTGCCCCC 60.600 66.667 0.00 0.00 0.00 5.40
903 914 4.278513 TCCCACTGTTTGCCCCCG 62.279 66.667 0.00 0.00 0.00 5.73
904 915 4.596585 CCCACTGTTTGCCCCCGT 62.597 66.667 0.00 0.00 0.00 5.28
905 916 3.294493 CCACTGTTTGCCCCCGTG 61.294 66.667 0.00 0.00 0.00 4.94
906 917 2.518349 CACTGTTTGCCCCCGTGT 60.518 61.111 0.00 0.00 0.00 4.49
907 918 2.518349 ACTGTTTGCCCCCGTGTG 60.518 61.111 0.00 0.00 0.00 3.82
908 919 3.977244 CTGTTTGCCCCCGTGTGC 61.977 66.667 0.00 0.00 0.00 4.57
909 920 4.514585 TGTTTGCCCCCGTGTGCT 62.515 61.111 0.00 0.00 0.00 4.40
910 921 3.223589 GTTTGCCCCCGTGTGCTT 61.224 61.111 0.00 0.00 0.00 3.91
911 922 2.443016 TTTGCCCCCGTGTGCTTT 60.443 55.556 0.00 0.00 0.00 3.51
912 923 2.494530 TTTGCCCCCGTGTGCTTTC 61.495 57.895 0.00 0.00 0.00 2.62
913 924 2.920076 TTTGCCCCCGTGTGCTTTCT 62.920 55.000 0.00 0.00 0.00 2.52
914 925 2.058125 TTGCCCCCGTGTGCTTTCTA 62.058 55.000 0.00 0.00 0.00 2.10
915 926 2.038837 GCCCCCGTGTGCTTTCTAC 61.039 63.158 0.00 0.00 0.00 2.59
916 927 1.677552 CCCCCGTGTGCTTTCTACT 59.322 57.895 0.00 0.00 0.00 2.57
917 928 0.391263 CCCCCGTGTGCTTTCTACTC 60.391 60.000 0.00 0.00 0.00 2.59
918 929 0.320374 CCCCGTGTGCTTTCTACTCA 59.680 55.000 0.00 0.00 0.00 3.41
919 930 1.270625 CCCCGTGTGCTTTCTACTCAA 60.271 52.381 0.00 0.00 0.00 3.02
920 931 2.069273 CCCGTGTGCTTTCTACTCAAG 58.931 52.381 0.00 0.00 0.00 3.02
921 932 2.548067 CCCGTGTGCTTTCTACTCAAGT 60.548 50.000 0.00 0.00 0.00 3.16
922 933 2.731976 CCGTGTGCTTTCTACTCAAGTC 59.268 50.000 0.00 0.00 0.00 3.01
923 934 2.405357 CGTGTGCTTTCTACTCAAGTCG 59.595 50.000 0.00 0.00 0.00 4.18
924 935 3.639538 GTGTGCTTTCTACTCAAGTCGA 58.360 45.455 0.00 0.00 0.00 4.20
925 936 4.049186 GTGTGCTTTCTACTCAAGTCGAA 58.951 43.478 0.00 0.00 0.00 3.71
926 937 4.506654 GTGTGCTTTCTACTCAAGTCGAAA 59.493 41.667 8.88 8.88 37.38 3.46
927 938 4.506654 TGTGCTTTCTACTCAAGTCGAAAC 59.493 41.667 5.92 5.03 35.63 2.78
928 939 4.056050 TGCTTTCTACTCAAGTCGAAACC 58.944 43.478 5.92 2.06 35.63 3.27
936 947 0.859232 CAAGTCGAAACCACCTCGTG 59.141 55.000 0.00 0.00 37.56 4.35
989 1006 3.597728 GCGGAGGAGGGAGCTACG 61.598 72.222 0.00 0.00 0.00 3.51
992 1009 0.465097 CGGAGGAGGGAGCTACGTTA 60.465 60.000 0.00 0.00 0.00 3.18
1278 1307 1.749634 AGCTTCCATGCTTGCATTCTC 59.250 47.619 5.24 0.00 40.93 2.87
1461 1497 1.387737 CAATGGAGGCCCCCTTTGA 59.612 57.895 23.13 0.00 41.32 2.69
1872 1929 2.503331 AGCCATTCGTGTTGTCATCAA 58.497 42.857 0.00 0.00 0.00 2.57
1892 1949 1.201429 TTGTCTTCCCAGGAGGCTCC 61.201 60.000 26.42 26.42 36.58 4.70
1915 1972 4.067896 GGTGGTACAAGCATATCATGGAG 58.932 47.826 0.00 0.00 44.16 3.86
1918 1975 3.750130 GGTACAAGCATATCATGGAGCTG 59.250 47.826 0.00 0.00 37.41 4.24
1934 1991 4.041321 TGGAGCTGATATCAGATTTCAGGG 59.959 45.833 32.38 7.59 43.41 4.45
1975 2032 2.499693 TGAACGGCATGAGAGGTATGAA 59.500 45.455 0.00 0.00 0.00 2.57
1986 2043 3.954904 GAGAGGTATGAACTCCACTGCTA 59.045 47.826 0.00 0.00 35.58 3.49
2017 2074 0.098376 GACGTAGATTCGTGTCCGCT 59.902 55.000 0.00 0.00 44.21 5.52
2020 2077 1.141019 TAGATTCGTGTCCGCTGGC 59.859 57.895 0.00 0.00 0.00 4.85
2021 2078 1.320344 TAGATTCGTGTCCGCTGGCT 61.320 55.000 0.00 0.00 0.00 4.75
2026 2083 2.342279 GTGTCCGCTGGCTGTACA 59.658 61.111 0.00 0.00 0.00 2.90
2032 2089 1.005037 CGCTGGCTGTACACTTCCA 60.005 57.895 0.00 0.00 0.00 3.53
2041 2098 1.273048 TGTACACTTCCAACGCCGTAT 59.727 47.619 0.00 0.00 0.00 3.06
2053 2110 1.507141 CGCCGTATGGAGGAATTGCC 61.507 60.000 4.73 0.00 37.49 4.52
2054 2111 0.465460 GCCGTATGGAGGAATTGCCA 60.465 55.000 4.73 0.00 37.49 4.92
2080 2137 0.916086 TAATTGATGGCCGGGTGAGT 59.084 50.000 2.18 0.00 0.00 3.41
2226 2283 4.350368 TTGACTGTACAGCTTTCATCCA 57.650 40.909 22.90 2.16 0.00 3.41
2266 2323 0.965866 TGGTGAGACTTCTCCGCGAT 60.966 55.000 8.23 0.00 42.20 4.58
2339 2396 2.695666 GACCTTGCTAGCAGTATCAGGA 59.304 50.000 30.39 9.87 0.00 3.86
2412 2475 2.944129 AGCTACAAAAGGTGAAGCCAA 58.056 42.857 0.00 0.00 40.61 4.52
2421 2484 0.328258 GGTGAAGCCAAGCCCTTCTA 59.672 55.000 0.00 0.00 39.47 2.10
2566 2631 8.329203 ACAGAAAGAAGATGGATAAAAGTGTC 57.671 34.615 0.00 0.00 0.00 3.67
2568 2633 9.658799 CAGAAAGAAGATGGATAAAAGTGTCTA 57.341 33.333 0.00 0.00 0.00 2.59
2610 2675 9.350357 GTGTCTAAAACGACATCTATTTAGTGA 57.650 33.333 0.00 0.00 44.84 3.41
2613 2678 9.917129 TCTAAAACGACATCTATTTAGTGACAA 57.083 29.630 0.00 0.00 36.93 3.18
2654 2719 5.045651 TGTTAGTGAGACCAATCCATCACAT 60.046 40.000 6.91 0.00 43.55 3.21
2678 2743 1.838077 GCCATAGACCTGGTTACACCT 59.162 52.381 0.00 0.00 39.58 4.00
2912 3090 1.608590 ACACAAATGGAAGAGGTTGCG 59.391 47.619 0.00 0.00 0.00 4.85
2937 3115 7.853437 CGTTAACATGTTGTTGTTATCACTCAA 59.147 33.333 21.42 0.00 41.30 3.02
3044 3222 8.019656 ACTGTCCTAAAGAACTCAAAGAAGTA 57.980 34.615 0.00 0.00 0.00 2.24
3238 3422 5.221342 ACCTCAGCTACAATAATCTTCCTCG 60.221 44.000 0.00 0.00 0.00 4.63
3275 3459 4.113354 GCCTGCTGTGTCTTAGTATGTAC 58.887 47.826 0.00 0.00 0.00 2.90
3278 3462 3.129813 TGCTGTGTCTTAGTATGTACCCG 59.870 47.826 0.00 0.00 0.00 5.28
3279 3463 3.379372 GCTGTGTCTTAGTATGTACCCGA 59.621 47.826 0.00 0.00 0.00 5.14
3349 3533 5.009631 TGAAGGTTTCATCCATACAACAGG 58.990 41.667 0.00 0.00 34.08 4.00
3462 3661 3.442625 TGAGGTGTCGTCCTGTACTATTG 59.557 47.826 0.00 0.00 38.02 1.90
3498 3697 6.036470 CACGATCTTATTGCAGACAAGTCTA 58.964 40.000 1.86 0.00 39.69 2.59
3499 3698 6.531594 CACGATCTTATTGCAGACAAGTCTAA 59.468 38.462 1.86 0.00 39.69 2.10
3695 3900 6.595716 TGCCTTCTATTTCAGAGTTTAAGCTC 59.404 38.462 11.09 11.09 33.83 4.09
3709 3914 2.086054 AAGCTCCTTCGTGTGCTAAG 57.914 50.000 0.00 0.00 35.09 2.18
3739 3947 1.748879 CTGGTTATGGTGGCCGTGG 60.749 63.158 0.00 0.00 0.00 4.94
3842 4056 4.019860 CCAGAACATATGCTAGGGCTACAT 60.020 45.833 1.58 0.00 39.59 2.29
4117 4361 0.846693 CTAGCCCTGGTTAATGGCCT 59.153 55.000 3.32 0.00 46.55 5.19
4187 4431 1.294068 TGGGATGGCTTAGTACCTCCT 59.706 52.381 0.00 0.00 0.00 3.69
4273 4520 1.813862 CGGAAAACTTGGTGAGCTCCA 60.814 52.381 12.15 0.00 35.49 3.86
4522 4778 3.350163 CAATGCCCCCAGACCCCT 61.350 66.667 0.00 0.00 0.00 4.79
4578 4834 2.575461 GCCACTTGCCATGCCTTC 59.425 61.111 0.00 0.00 0.00 3.46
4666 4922 2.740981 GCAATCATCCGAGCAATCCTAG 59.259 50.000 0.00 0.00 0.00 3.02
4759 5015 0.680061 GTTGTGGAGGAAGACCGAGT 59.320 55.000 0.00 0.00 41.83 4.18
4841 5097 1.455786 GCAATCGATATGACGGTTCCG 59.544 52.381 9.81 9.81 34.29 4.30
4851 5107 4.404098 CGGTTCCGGAGTTGGGGG 62.404 72.222 3.34 0.00 0.00 5.40
4951 5207 2.487934 CTCCGGCCATTCAATCTACAG 58.512 52.381 2.24 0.00 0.00 2.74
5123 5379 3.698289 TGACTTCCGTATCTCTCAAGGT 58.302 45.455 0.00 0.00 0.00 3.50
5273 5529 1.532868 ACTTTGTCAGACATTGCTCGC 59.467 47.619 3.45 0.00 0.00 5.03
5281 5537 2.014093 GACATTGCTCGCGAGTTCGG 62.014 60.000 34.46 23.74 40.23 4.30
5303 5559 1.642112 TGCCCTTTGAATTCCATGCA 58.358 45.000 2.27 2.34 0.00 3.96
5306 5562 2.760092 GCCCTTTGAATTCCATGCACTA 59.240 45.455 2.27 0.00 0.00 2.74
5323 5579 3.365868 GCACTAGATATCTCTGTCAGCGG 60.366 52.174 8.95 0.00 32.66 5.52
5387 5643 2.288666 GCAGTGAACTTCAACCTGACA 58.711 47.619 11.72 0.00 0.00 3.58
5521 5777 1.966451 CGAACACAGGCCCCTTCAC 60.966 63.158 0.00 0.00 0.00 3.18
5540 5796 2.962569 CAGAGGTTCGCGGAGACA 59.037 61.111 6.13 0.00 0.00 3.41
5708 5970 2.613977 CGAGGTCTTCAGCAAGTGGAAT 60.614 50.000 0.00 0.00 0.00 3.01
5747 6009 1.507141 GGTTCAGACCGTTGCCACTG 61.507 60.000 0.00 0.00 35.91 3.66
5786 6048 3.117171 CTCAGGACGCTGCTGCAC 61.117 66.667 16.29 8.59 35.65 4.57
5806 6068 4.492247 GCACTACTACTCGTCGAACTACAG 60.492 50.000 0.00 0.00 0.00 2.74
5853 6115 2.330216 ACCTCGGATGGAAGAATAGGG 58.670 52.381 0.00 0.00 0.00 3.53
5858 6120 1.352687 GGATGGAAGAATAGGGCCCTC 59.647 57.143 32.80 15.65 0.00 4.30
5864 6126 0.263765 AGAATAGGGCCCTCGTGGTA 59.736 55.000 32.80 10.65 36.04 3.25
5870 6132 2.125961 GGCCCTCGTGGTATCGTCT 61.126 63.158 2.33 0.00 36.04 4.18
5889 6157 4.693283 GTCTGCATGGCACTAGTGTTATA 58.307 43.478 23.44 8.56 33.79 0.98
5931 6202 1.596260 CATGCTTGTGCTATGTCCTCG 59.404 52.381 0.00 0.00 40.48 4.63
5934 6205 1.404181 GCTTGTGCTATGTCCTCGTGA 60.404 52.381 0.00 0.00 36.03 4.35
5962 6234 5.465056 GGGTTGTTTTGAACCATGTATTGTG 59.535 40.000 0.00 0.00 46.42 3.33
5971 6243 5.469760 TGAACCATGTATTGTGTGAACTCTG 59.530 40.000 0.00 0.00 0.00 3.35
5998 6276 9.886132 AACTACCTGTTTCTTAGTAATATGTGG 57.114 33.333 0.00 0.00 34.84 4.17
6035 6313 2.093181 CGTGATATGGGAGGGTTGTTCA 60.093 50.000 0.00 0.00 0.00 3.18
6067 6345 5.465056 CCTTCTCTGTTTCAGACACTTCTTC 59.535 44.000 0.00 0.00 35.39 2.87
6083 6361 6.481313 ACACTTCTTCCTTTTAAACCGAGTAC 59.519 38.462 0.00 0.00 0.00 2.73
6117 6400 2.034053 ACCACAAACATTGCAACGTAGG 59.966 45.455 0.00 3.00 0.00 3.18
6189 6472 7.888021 ACATGTTCCTGGTTCACAATATTAGAA 59.112 33.333 0.00 0.00 0.00 2.10
6190 6473 8.906867 CATGTTCCTGGTTCACAATATTAGAAT 58.093 33.333 5.98 0.00 0.00 2.40
6243 6537 7.060421 TGGTGGTAAGTTCTCTTCAGATTTTT 58.940 34.615 0.00 0.00 35.36 1.94
6310 6604 5.977635 AGTCATGATCAGTCGGATTACAAA 58.022 37.500 0.00 0.00 36.00 2.83
6332 6626 8.084073 ACAAATTATTGGTGATTCAGTTCACAG 58.916 33.333 6.88 0.00 46.32 3.66
6334 6628 8.862325 AATTATTGGTGATTCAGTTCACAGTA 57.138 30.769 6.88 0.00 46.32 2.74
6345 6639 6.767524 TCAGTTCACAGTACAAAACCAAAT 57.232 33.333 0.00 0.00 0.00 2.32
6346 6640 7.867305 TCAGTTCACAGTACAAAACCAAATA 57.133 32.000 0.00 0.00 0.00 1.40
6347 6641 7.925993 TCAGTTCACAGTACAAAACCAAATAG 58.074 34.615 0.00 0.00 0.00 1.73
6348 6642 7.554835 TCAGTTCACAGTACAAAACCAAATAGT 59.445 33.333 0.00 0.00 0.00 2.12
6349 6643 8.832521 CAGTTCACAGTACAAAACCAAATAGTA 58.167 33.333 0.00 0.00 0.00 1.82
6386 6805 2.509336 CCTACAAGGCGTGGCTCG 60.509 66.667 5.22 4.32 43.12 5.03
6447 7484 4.634012 TTGGCTACAGTGTAGGTTCAAT 57.366 40.909 27.48 0.00 0.00 2.57
6452 7489 2.942710 ACAGTGTAGGTTCAATCGACG 58.057 47.619 0.00 0.00 0.00 5.12
6464 7501 4.105727 TCGACGGCTCGACTAGAG 57.894 61.111 0.00 0.00 44.14 2.43
6494 7531 3.250744 TGACCTAAAATGAAGAGCGTCG 58.749 45.455 0.00 0.00 0.00 5.12
6508 7545 2.342648 GTCGACCGGTGAAGGCTT 59.657 61.111 14.63 0.00 33.69 4.35
6544 7581 0.548682 ACATGTTCTGGAGAGGGCCT 60.549 55.000 5.25 5.25 0.00 5.19
6576 7613 4.069232 CTTGTCCGCTCGCCCTGA 62.069 66.667 0.00 0.00 0.00 3.86
6578 7615 2.859273 CTTGTCCGCTCGCCCTGAAT 62.859 60.000 0.00 0.00 0.00 2.57
6598 7635 1.320382 CGACAAATGCGTGAACGTGC 61.320 55.000 4.59 0.00 42.22 5.34
6637 7674 1.568597 CACCACCCATTCCTATCCCAA 59.431 52.381 0.00 0.00 0.00 4.12
6690 7740 5.256474 AGTTTGGTGATCCTTGAATCGAAT 58.744 37.500 0.00 0.00 34.23 3.34
6703 7754 6.699642 CCTTGAATCGAATCTCTTCCTCTTAC 59.300 42.308 1.55 0.00 0.00 2.34
6721 7772 6.029346 TCTTACGACTTAAACCTAGGTTGG 57.971 41.667 27.75 20.89 38.47 3.77
6725 7776 3.374058 CGACTTAAACCTAGGTTGGCATG 59.626 47.826 27.75 18.14 38.47 4.06
6843 7894 2.288886 ACTTGGCGTTAGTTCCTGTCTC 60.289 50.000 0.00 0.00 0.00 3.36
6854 7905 5.388408 AGTTCCTGTCTCGTTTTACTAGG 57.612 43.478 0.00 0.00 0.00 3.02
6855 7906 5.075493 AGTTCCTGTCTCGTTTTACTAGGA 58.925 41.667 0.00 0.00 0.00 2.94
6856 7907 5.183522 AGTTCCTGTCTCGTTTTACTAGGAG 59.816 44.000 0.00 0.00 34.63 3.69
6857 7908 4.914983 TCCTGTCTCGTTTTACTAGGAGA 58.085 43.478 0.00 0.00 36.88 3.71
6858 7909 4.942483 TCCTGTCTCGTTTTACTAGGAGAG 59.058 45.833 0.00 0.00 39.09 3.20
6859 7910 4.942483 CCTGTCTCGTTTTACTAGGAGAGA 59.058 45.833 0.00 0.00 39.09 3.10
6860 7911 5.415077 CCTGTCTCGTTTTACTAGGAGAGAA 59.585 44.000 0.00 0.00 39.09 2.87
6861 7912 6.403855 CCTGTCTCGTTTTACTAGGAGAGAAG 60.404 46.154 0.00 0.00 39.09 2.85
6862 7913 6.002704 TGTCTCGTTTTACTAGGAGAGAAGT 58.997 40.000 0.00 0.00 39.09 3.01
6863 7914 6.072618 TGTCTCGTTTTACTAGGAGAGAAGTG 60.073 42.308 0.00 0.00 39.09 3.16
6864 7915 5.056894 TCGTTTTACTAGGAGAGAAGTGC 57.943 43.478 0.00 0.00 0.00 4.40
6865 7916 4.521639 TCGTTTTACTAGGAGAGAAGTGCA 59.478 41.667 0.00 0.00 0.00 4.57
6866 7917 5.185249 TCGTTTTACTAGGAGAGAAGTGCAT 59.815 40.000 0.00 0.00 0.00 3.96
6867 7918 6.376299 TCGTTTTACTAGGAGAGAAGTGCATA 59.624 38.462 0.00 0.00 0.00 3.14
6868 7919 7.068348 TCGTTTTACTAGGAGAGAAGTGCATAT 59.932 37.037 0.00 0.00 0.00 1.78
6869 7920 7.707035 CGTTTTACTAGGAGAGAAGTGCATATT 59.293 37.037 0.00 0.00 0.00 1.28
6872 7923 8.762481 TTACTAGGAGAGAAGTGCATATTACA 57.238 34.615 0.00 0.00 0.00 2.41
6873 7924 7.045126 ACTAGGAGAGAAGTGCATATTACAC 57.955 40.000 0.00 0.00 38.35 2.90
6874 7925 5.283457 AGGAGAGAAGTGCATATTACACC 57.717 43.478 0.00 0.00 38.87 4.16
6875 7926 4.101741 AGGAGAGAAGTGCATATTACACCC 59.898 45.833 0.00 0.00 38.87 4.61
6876 7927 4.381411 GAGAGAAGTGCATATTACACCCC 58.619 47.826 0.00 0.00 38.87 4.95
6877 7928 4.040755 AGAGAAGTGCATATTACACCCCT 58.959 43.478 0.00 1.15 38.87 4.79
6878 7929 4.101741 AGAGAAGTGCATATTACACCCCTC 59.898 45.833 0.00 12.42 38.87 4.30
6879 7930 3.780294 AGAAGTGCATATTACACCCCTCA 59.220 43.478 0.00 0.00 38.87 3.86
6880 7931 4.227300 AGAAGTGCATATTACACCCCTCAA 59.773 41.667 0.00 0.00 38.87 3.02
6881 7932 3.886123 AGTGCATATTACACCCCTCAAC 58.114 45.455 0.00 0.00 38.87 3.18
6882 7933 3.523564 AGTGCATATTACACCCCTCAACT 59.476 43.478 0.00 0.00 38.87 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
96 99 2.107141 GCGTCTGCTAAGGCCGAT 59.893 61.111 0.00 0.00 38.39 4.18
97 100 4.143333 GGCGTCTGCTAAGGCCGA 62.143 66.667 0.00 0.00 40.08 5.54
310 313 3.484806 TGGTCCCTGTGCGTGGTT 61.485 61.111 0.00 0.00 0.00 3.67
602 613 3.281787 TCCCTCCCCCGACCTCTT 61.282 66.667 0.00 0.00 0.00 2.85
624 635 4.162690 CCCTAGCTCCGCCGCTTT 62.163 66.667 0.00 0.00 41.30 3.51
682 693 3.025262 GGACACGACTCTTTATCCTCCT 58.975 50.000 0.00 0.00 0.00 3.69
697 708 1.446099 CACACATCCGAGGGACACG 60.446 63.158 0.00 0.00 43.22 4.49
698 709 0.670546 CACACACATCCGAGGGACAC 60.671 60.000 0.00 0.00 32.98 3.67
699 710 1.118965 ACACACACATCCGAGGGACA 61.119 55.000 0.00 0.00 32.98 4.02
700 711 0.670546 CACACACACATCCGAGGGAC 60.671 60.000 0.00 0.00 32.98 4.46
701 712 1.671166 CACACACACATCCGAGGGA 59.329 57.895 0.00 0.00 35.55 4.20
702 713 1.375908 CCACACACACATCCGAGGG 60.376 63.158 0.00 0.00 0.00 4.30
703 714 0.670546 GTCCACACACACATCCGAGG 60.671 60.000 0.00 0.00 0.00 4.63
704 715 0.318441 AGTCCACACACACATCCGAG 59.682 55.000 0.00 0.00 0.00 4.63
705 716 0.317160 GAGTCCACACACACATCCGA 59.683 55.000 0.00 0.00 0.00 4.55
706 717 0.318441 AGAGTCCACACACACATCCG 59.682 55.000 0.00 0.00 0.00 4.18
707 718 1.800805 CAGAGTCCACACACACATCC 58.199 55.000 0.00 0.00 0.00 3.51
708 719 1.151668 GCAGAGTCCACACACACATC 58.848 55.000 0.00 0.00 0.00 3.06
709 720 0.250467 GGCAGAGTCCACACACACAT 60.250 55.000 0.00 0.00 0.00 3.21
710 721 1.146041 GGCAGAGTCCACACACACA 59.854 57.895 0.00 0.00 0.00 3.72
711 722 0.679505 TAGGCAGAGTCCACACACAC 59.320 55.000 0.00 0.00 0.00 3.82
712 723 1.550524 GATAGGCAGAGTCCACACACA 59.449 52.381 0.00 0.00 0.00 3.72
713 724 1.550524 TGATAGGCAGAGTCCACACAC 59.449 52.381 0.00 0.00 0.00 3.82
714 725 1.937191 TGATAGGCAGAGTCCACACA 58.063 50.000 0.00 0.00 0.00 3.72
745 756 3.127548 CCACATATCTCGCTGCACTTTTT 59.872 43.478 0.00 0.00 0.00 1.94
746 757 2.679837 CCACATATCTCGCTGCACTTTT 59.320 45.455 0.00 0.00 0.00 2.27
747 758 2.283298 CCACATATCTCGCTGCACTTT 58.717 47.619 0.00 0.00 0.00 2.66
748 759 1.473965 CCCACATATCTCGCTGCACTT 60.474 52.381 0.00 0.00 0.00 3.16
749 760 0.105593 CCCACATATCTCGCTGCACT 59.894 55.000 0.00 0.00 0.00 4.40
750 761 0.882042 CCCCACATATCTCGCTGCAC 60.882 60.000 0.00 0.00 0.00 4.57
751 762 1.048160 TCCCCACATATCTCGCTGCA 61.048 55.000 0.00 0.00 0.00 4.41
752 763 0.322975 ATCCCCACATATCTCGCTGC 59.677 55.000 0.00 0.00 0.00 5.25
753 764 2.847327 AATCCCCACATATCTCGCTG 57.153 50.000 0.00 0.00 0.00 5.18
754 765 3.261897 CCTAAATCCCCACATATCTCGCT 59.738 47.826 0.00 0.00 0.00 4.93
755 766 3.260884 TCCTAAATCCCCACATATCTCGC 59.739 47.826 0.00 0.00 0.00 5.03
756 767 4.528596 ACTCCTAAATCCCCACATATCTCG 59.471 45.833 0.00 0.00 0.00 4.04
757 768 6.441088 AACTCCTAAATCCCCACATATCTC 57.559 41.667 0.00 0.00 0.00 2.75
758 769 6.389869 TCAAACTCCTAAATCCCCACATATCT 59.610 38.462 0.00 0.00 0.00 1.98
759 770 6.486993 GTCAAACTCCTAAATCCCCACATATC 59.513 42.308 0.00 0.00 0.00 1.63
760 771 6.365520 GTCAAACTCCTAAATCCCCACATAT 58.634 40.000 0.00 0.00 0.00 1.78
761 772 5.339695 GGTCAAACTCCTAAATCCCCACATA 60.340 44.000 0.00 0.00 0.00 2.29
762 773 4.569865 GGTCAAACTCCTAAATCCCCACAT 60.570 45.833 0.00 0.00 0.00 3.21
763 774 3.245122 GGTCAAACTCCTAAATCCCCACA 60.245 47.826 0.00 0.00 0.00 4.17
764 775 3.353557 GGTCAAACTCCTAAATCCCCAC 58.646 50.000 0.00 0.00 0.00 4.61
765 776 2.026636 CGGTCAAACTCCTAAATCCCCA 60.027 50.000 0.00 0.00 0.00 4.96
766 777 2.640184 CGGTCAAACTCCTAAATCCCC 58.360 52.381 0.00 0.00 0.00 4.81
767 778 2.640184 CCGGTCAAACTCCTAAATCCC 58.360 52.381 0.00 0.00 0.00 3.85
768 779 2.237893 TCCCGGTCAAACTCCTAAATCC 59.762 50.000 0.00 0.00 0.00 3.01
769 780 3.622166 TCCCGGTCAAACTCCTAAATC 57.378 47.619 0.00 0.00 0.00 2.17
770 781 5.703730 TTATCCCGGTCAAACTCCTAAAT 57.296 39.130 0.00 0.00 0.00 1.40
771 782 5.397109 GGATTATCCCGGTCAAACTCCTAAA 60.397 44.000 0.00 0.00 0.00 1.85
772 783 4.102054 GGATTATCCCGGTCAAACTCCTAA 59.898 45.833 0.00 0.00 0.00 2.69
773 784 3.644738 GGATTATCCCGGTCAAACTCCTA 59.355 47.826 0.00 0.00 0.00 2.94
774 785 2.438392 GGATTATCCCGGTCAAACTCCT 59.562 50.000 0.00 0.00 0.00 3.69
775 786 2.438392 AGGATTATCCCGGTCAAACTCC 59.562 50.000 7.76 0.00 37.19 3.85
776 787 3.729966 GAGGATTATCCCGGTCAAACTC 58.270 50.000 7.76 0.66 37.19 3.01
777 788 2.102588 CGAGGATTATCCCGGTCAAACT 59.897 50.000 7.76 0.00 37.19 2.66
778 789 2.159000 ACGAGGATTATCCCGGTCAAAC 60.159 50.000 20.27 0.00 37.19 2.93
779 790 2.101917 GACGAGGATTATCCCGGTCAAA 59.898 50.000 20.44 0.00 38.43 2.69
780 791 1.684983 GACGAGGATTATCCCGGTCAA 59.315 52.381 20.44 0.00 38.43 3.18
781 792 1.325355 GACGAGGATTATCCCGGTCA 58.675 55.000 20.44 0.00 38.43 4.02
782 793 1.325355 TGACGAGGATTATCCCGGTC 58.675 55.000 19.25 19.25 38.79 4.79
783 794 1.784358 TTGACGAGGATTATCCCGGT 58.216 50.000 20.27 13.60 37.19 5.28
784 795 3.402628 AATTGACGAGGATTATCCCGG 57.597 47.619 20.27 10.98 37.19 5.73
785 796 3.746492 GGAAATTGACGAGGATTATCCCG 59.254 47.826 16.56 16.56 37.19 5.14
786 797 4.974399 AGGAAATTGACGAGGATTATCCC 58.026 43.478 7.76 0.00 37.19 3.85
787 798 8.446599 TTTTAGGAAATTGACGAGGATTATCC 57.553 34.615 2.40 2.40 36.58 2.59
790 801 9.037737 CGTATTTTAGGAAATTGACGAGGATTA 57.962 33.333 0.00 0.00 38.53 1.75
791 802 7.466860 GCGTATTTTAGGAAATTGACGAGGATT 60.467 37.037 9.90 0.00 38.53 3.01
792 803 6.018180 GCGTATTTTAGGAAATTGACGAGGAT 60.018 38.462 9.90 0.00 38.53 3.24
793 804 5.292589 GCGTATTTTAGGAAATTGACGAGGA 59.707 40.000 9.90 0.00 38.53 3.71
794 805 5.293569 AGCGTATTTTAGGAAATTGACGAGG 59.706 40.000 9.90 0.00 38.53 4.63
795 806 6.345920 AGCGTATTTTAGGAAATTGACGAG 57.654 37.500 9.90 0.00 38.53 4.18
796 807 7.037438 ACTAGCGTATTTTAGGAAATTGACGA 58.963 34.615 9.90 0.00 38.53 4.20
797 808 7.230466 ACTAGCGTATTTTAGGAAATTGACG 57.770 36.000 0.00 0.00 38.93 4.35
798 809 8.546244 GGTACTAGCGTATTTTAGGAAATTGAC 58.454 37.037 0.00 0.00 36.82 3.18
799 810 8.259411 TGGTACTAGCGTATTTTAGGAAATTGA 58.741 33.333 0.00 0.00 36.82 2.57
800 811 8.428186 TGGTACTAGCGTATTTTAGGAAATTG 57.572 34.615 0.00 0.00 36.82 2.32
801 812 9.452287 TTTGGTACTAGCGTATTTTAGGAAATT 57.548 29.630 0.00 0.00 36.82 1.82
802 813 8.886719 GTTTGGTACTAGCGTATTTTAGGAAAT 58.113 33.333 0.00 0.00 38.88 2.17
803 814 7.877097 TGTTTGGTACTAGCGTATTTTAGGAAA 59.123 33.333 0.00 0.00 0.00 3.13
804 815 7.385267 TGTTTGGTACTAGCGTATTTTAGGAA 58.615 34.615 0.00 0.00 0.00 3.36
805 816 6.934056 TGTTTGGTACTAGCGTATTTTAGGA 58.066 36.000 0.00 0.00 0.00 2.94
806 817 7.599630 TTGTTTGGTACTAGCGTATTTTAGG 57.400 36.000 0.00 0.00 0.00 2.69
807 818 7.691050 GCTTTGTTTGGTACTAGCGTATTTTAG 59.309 37.037 0.00 0.00 0.00 1.85
808 819 7.361116 GGCTTTGTTTGGTACTAGCGTATTTTA 60.361 37.037 0.00 0.00 36.56 1.52
809 820 6.376177 GCTTTGTTTGGTACTAGCGTATTTT 58.624 36.000 0.00 0.00 0.00 1.82
810 821 5.106436 GGCTTTGTTTGGTACTAGCGTATTT 60.106 40.000 0.00 0.00 36.56 1.40
811 822 4.393990 GGCTTTGTTTGGTACTAGCGTATT 59.606 41.667 0.00 0.00 36.56 1.89
812 823 3.937079 GGCTTTGTTTGGTACTAGCGTAT 59.063 43.478 0.00 0.00 36.56 3.06
813 824 3.007182 AGGCTTTGTTTGGTACTAGCGTA 59.993 43.478 0.00 0.00 36.56 4.42
814 825 2.148768 GGCTTTGTTTGGTACTAGCGT 58.851 47.619 0.00 0.00 36.56 5.07
815 826 2.423577 AGGCTTTGTTTGGTACTAGCG 58.576 47.619 0.00 0.00 36.56 4.26
816 827 4.395231 CCTAAGGCTTTGTTTGGTACTAGC 59.605 45.833 4.45 0.00 35.63 3.42
817 828 4.941873 CCCTAAGGCTTTGTTTGGTACTAG 59.058 45.833 4.45 0.00 0.00 2.57
818 829 4.351704 ACCCTAAGGCTTTGTTTGGTACTA 59.648 41.667 4.45 0.00 36.11 1.82
819 830 3.139584 ACCCTAAGGCTTTGTTTGGTACT 59.860 43.478 4.45 0.00 36.11 2.73
820 831 3.493334 ACCCTAAGGCTTTGTTTGGTAC 58.507 45.455 4.45 0.00 36.11 3.34
821 832 3.887916 ACCCTAAGGCTTTGTTTGGTA 57.112 42.857 4.45 0.00 36.11 3.25
822 833 2.767644 ACCCTAAGGCTTTGTTTGGT 57.232 45.000 4.45 3.62 36.11 3.67
823 834 5.538849 TTAAACCCTAAGGCTTTGTTTGG 57.461 39.130 22.02 13.49 36.11 3.28
824 835 8.445275 AAAATTAAACCCTAAGGCTTTGTTTG 57.555 30.769 22.02 9.29 36.11 2.93
825 836 9.772973 CTAAAATTAAACCCTAAGGCTTTGTTT 57.227 29.630 19.26 19.26 36.11 2.83
826 837 8.372459 CCTAAAATTAAACCCTAAGGCTTTGTT 58.628 33.333 4.45 4.37 36.11 2.83
827 838 7.038587 CCCTAAAATTAAACCCTAAGGCTTTGT 60.039 37.037 4.45 0.00 36.11 2.83
828 839 7.327975 CCCTAAAATTAAACCCTAAGGCTTTG 58.672 38.462 4.45 2.74 36.11 2.77
829 840 6.442564 CCCCTAAAATTAAACCCTAAGGCTTT 59.557 38.462 4.45 0.00 36.11 3.51
830 841 5.962031 CCCCTAAAATTAAACCCTAAGGCTT 59.038 40.000 4.58 4.58 36.11 4.35
831 842 5.016998 ACCCCTAAAATTAAACCCTAAGGCT 59.983 40.000 0.00 0.00 36.11 4.58
832 843 5.274822 ACCCCTAAAATTAAACCCTAAGGC 58.725 41.667 0.00 0.00 36.11 4.35
833 844 7.617225 CAAACCCCTAAAATTAAACCCTAAGG 58.383 38.462 0.00 0.00 40.04 2.69
834 845 7.038587 AGCAAACCCCTAAAATTAAACCCTAAG 60.039 37.037 0.00 0.00 0.00 2.18
835 846 6.788456 AGCAAACCCCTAAAATTAAACCCTAA 59.212 34.615 0.00 0.00 0.00 2.69
836 847 6.324544 AGCAAACCCCTAAAATTAAACCCTA 58.675 36.000 0.00 0.00 0.00 3.53
837 848 5.159637 AGCAAACCCCTAAAATTAAACCCT 58.840 37.500 0.00 0.00 0.00 4.34
838 849 5.492855 AGCAAACCCCTAAAATTAAACCC 57.507 39.130 0.00 0.00 0.00 4.11
839 850 7.177921 ACTCTAGCAAACCCCTAAAATTAAACC 59.822 37.037 0.00 0.00 0.00 3.27
840 851 8.118976 ACTCTAGCAAACCCCTAAAATTAAAC 57.881 34.615 0.00 0.00 0.00 2.01
841 852 8.581578 CAACTCTAGCAAACCCCTAAAATTAAA 58.418 33.333 0.00 0.00 0.00 1.52
842 853 7.177744 CCAACTCTAGCAAACCCCTAAAATTAA 59.822 37.037 0.00 0.00 0.00 1.40
843 854 6.661805 CCAACTCTAGCAAACCCCTAAAATTA 59.338 38.462 0.00 0.00 0.00 1.40
844 855 5.480422 CCAACTCTAGCAAACCCCTAAAATT 59.520 40.000 0.00 0.00 0.00 1.82
845 856 5.016831 CCAACTCTAGCAAACCCCTAAAAT 58.983 41.667 0.00 0.00 0.00 1.82
846 857 4.141111 ACCAACTCTAGCAAACCCCTAAAA 60.141 41.667 0.00 0.00 0.00 1.52
847 858 3.396611 ACCAACTCTAGCAAACCCCTAAA 59.603 43.478 0.00 0.00 0.00 1.85
848 859 2.983898 ACCAACTCTAGCAAACCCCTAA 59.016 45.455 0.00 0.00 0.00 2.69
849 860 2.570302 GACCAACTCTAGCAAACCCCTA 59.430 50.000 0.00 0.00 0.00 3.53
850 861 1.351350 GACCAACTCTAGCAAACCCCT 59.649 52.381 0.00 0.00 0.00 4.79
851 862 1.351350 AGACCAACTCTAGCAAACCCC 59.649 52.381 0.00 0.00 0.00 4.95
852 863 2.861147 AGACCAACTCTAGCAAACCC 57.139 50.000 0.00 0.00 0.00 4.11
853 864 3.678548 CGTAAGACCAACTCTAGCAAACC 59.321 47.826 0.00 0.00 43.02 3.27
854 865 3.678548 CCGTAAGACCAACTCTAGCAAAC 59.321 47.826 0.00 0.00 43.02 2.93
855 866 3.863400 GCCGTAAGACCAACTCTAGCAAA 60.863 47.826 0.00 0.00 43.02 3.68
856 867 2.353406 GCCGTAAGACCAACTCTAGCAA 60.353 50.000 0.00 0.00 43.02 3.91
857 868 1.203994 GCCGTAAGACCAACTCTAGCA 59.796 52.381 0.00 0.00 43.02 3.49
858 869 1.471153 GGCCGTAAGACCAACTCTAGC 60.471 57.143 0.00 0.00 43.02 3.42
859 870 2.100989 AGGCCGTAAGACCAACTCTAG 58.899 52.381 0.00 0.00 43.02 2.43
860 871 1.822990 CAGGCCGTAAGACCAACTCTA 59.177 52.381 0.00 0.00 43.02 2.43
861 872 0.608640 CAGGCCGTAAGACCAACTCT 59.391 55.000 0.00 0.00 43.02 3.24
862 873 0.320697 ACAGGCCGTAAGACCAACTC 59.679 55.000 0.00 0.00 43.02 3.01
863 874 0.763035 AACAGGCCGTAAGACCAACT 59.237 50.000 0.00 0.00 43.02 3.16
864 875 1.534163 GAAACAGGCCGTAAGACCAAC 59.466 52.381 0.00 0.00 43.02 3.77
865 876 1.874739 CGAAACAGGCCGTAAGACCAA 60.875 52.381 0.00 0.00 43.02 3.67
866 877 0.320073 CGAAACAGGCCGTAAGACCA 60.320 55.000 0.00 0.00 43.02 4.02
867 878 0.320160 ACGAAACAGGCCGTAAGACC 60.320 55.000 0.00 0.00 37.23 3.85
868 879 1.066136 GACGAAACAGGCCGTAAGAC 58.934 55.000 0.00 0.00 39.30 3.01
869 880 0.037975 GGACGAAACAGGCCGTAAGA 60.038 55.000 0.00 0.00 39.30 2.10
870 881 1.017701 GGGACGAAACAGGCCGTAAG 61.018 60.000 0.00 0.00 41.32 2.34
871 882 1.004679 GGGACGAAACAGGCCGTAA 60.005 57.895 0.00 0.00 41.32 3.18
872 883 2.208619 TGGGACGAAACAGGCCGTA 61.209 57.895 0.00 0.00 41.32 4.02
873 884 3.552384 TGGGACGAAACAGGCCGT 61.552 61.111 0.00 0.00 41.32 5.68
874 885 3.047877 GTGGGACGAAACAGGCCG 61.048 66.667 0.00 0.00 41.32 6.13
875 886 1.966451 CAGTGGGACGAAACAGGCC 60.966 63.158 0.00 0.00 39.05 5.19
876 887 0.818040 AACAGTGGGACGAAACAGGC 60.818 55.000 0.00 0.00 0.00 4.85
877 888 1.333619 CAAACAGTGGGACGAAACAGG 59.666 52.381 0.00 0.00 0.00 4.00
878 889 1.268539 GCAAACAGTGGGACGAAACAG 60.269 52.381 0.00 0.00 0.00 3.16
879 890 0.736053 GCAAACAGTGGGACGAAACA 59.264 50.000 0.00 0.00 0.00 2.83
880 891 0.030235 GGCAAACAGTGGGACGAAAC 59.970 55.000 0.00 0.00 0.00 2.78
881 892 1.104577 GGGCAAACAGTGGGACGAAA 61.105 55.000 0.00 0.00 0.00 3.46
882 893 1.527380 GGGCAAACAGTGGGACGAA 60.527 57.895 0.00 0.00 0.00 3.85
883 894 2.112297 GGGCAAACAGTGGGACGA 59.888 61.111 0.00 0.00 0.00 4.20
884 895 2.983592 GGGGCAAACAGTGGGACG 60.984 66.667 0.00 0.00 0.00 4.79
885 896 2.600470 GGGGGCAAACAGTGGGAC 60.600 66.667 0.00 0.00 0.00 4.46
886 897 4.278513 CGGGGGCAAACAGTGGGA 62.279 66.667 0.00 0.00 0.00 4.37
887 898 4.596585 ACGGGGGCAAACAGTGGG 62.597 66.667 0.00 0.00 0.00 4.61
888 899 3.294493 CACGGGGGCAAACAGTGG 61.294 66.667 0.00 0.00 0.00 4.00
889 900 2.518349 ACACGGGGGCAAACAGTG 60.518 61.111 0.00 5.21 38.63 3.66
890 901 2.518349 CACACGGGGGCAAACAGT 60.518 61.111 0.00 0.00 0.00 3.55
891 902 3.977244 GCACACGGGGGCAAACAG 61.977 66.667 7.26 0.00 0.00 3.16
892 903 4.514585 AGCACACGGGGGCAAACA 62.515 61.111 17.68 0.00 0.00 2.83
893 904 2.693250 GAAAGCACACGGGGGCAAAC 62.693 60.000 17.68 0.00 0.00 2.93
894 905 2.443016 AAAGCACACGGGGGCAAA 60.443 55.556 17.68 0.00 0.00 3.68
895 906 2.058125 TAGAAAGCACACGGGGGCAA 62.058 55.000 17.68 0.00 0.00 4.52
896 907 2.521451 TAGAAAGCACACGGGGGCA 61.521 57.895 17.68 0.00 0.00 5.36
897 908 2.038837 GTAGAAAGCACACGGGGGC 61.039 63.158 1.82 1.82 0.00 5.80
898 909 0.391263 GAGTAGAAAGCACACGGGGG 60.391 60.000 0.00 0.00 0.00 5.40
899 910 0.320374 TGAGTAGAAAGCACACGGGG 59.680 55.000 0.00 0.00 0.00 5.73
900 911 2.069273 CTTGAGTAGAAAGCACACGGG 58.931 52.381 0.00 0.00 0.00 5.28
901 912 2.731976 GACTTGAGTAGAAAGCACACGG 59.268 50.000 0.00 0.00 0.00 4.94
902 913 2.405357 CGACTTGAGTAGAAAGCACACG 59.595 50.000 0.00 0.00 0.00 4.49
903 914 3.639538 TCGACTTGAGTAGAAAGCACAC 58.360 45.455 0.00 0.00 0.00 3.82
904 915 4.316205 TTCGACTTGAGTAGAAAGCACA 57.684 40.909 4.52 0.00 36.87 4.57
905 916 5.007848 GTTTCGACTTGAGTAGAAAGCAC 57.992 43.478 16.33 5.87 45.51 4.40
908 919 4.448060 GGTGGTTTCGACTTGAGTAGAAAG 59.552 45.833 16.33 0.00 45.51 2.62
909 920 4.100498 AGGTGGTTTCGACTTGAGTAGAAA 59.900 41.667 13.19 13.19 43.76 2.52
910 921 3.640029 AGGTGGTTTCGACTTGAGTAGAA 59.360 43.478 3.06 3.06 37.77 2.10
911 922 3.228453 AGGTGGTTTCGACTTGAGTAGA 58.772 45.455 0.00 0.00 0.00 2.59
912 923 3.576648 GAGGTGGTTTCGACTTGAGTAG 58.423 50.000 0.00 0.00 0.00 2.57
913 924 2.030540 CGAGGTGGTTTCGACTTGAGTA 60.031 50.000 0.00 0.00 40.36 2.59
914 925 1.269621 CGAGGTGGTTTCGACTTGAGT 60.270 52.381 0.00 0.00 40.36 3.41
915 926 1.269621 ACGAGGTGGTTTCGACTTGAG 60.270 52.381 1.31 0.00 40.36 3.02
916 927 0.748450 ACGAGGTGGTTTCGACTTGA 59.252 50.000 1.31 0.00 40.36 3.02
917 928 0.859232 CACGAGGTGGTTTCGACTTG 59.141 55.000 1.31 0.00 40.36 3.16
918 929 0.462789 ACACGAGGTGGTTTCGACTT 59.537 50.000 1.31 0.00 40.36 3.01
919 930 0.031721 GACACGAGGTGGTTTCGACT 59.968 55.000 1.31 0.00 40.36 4.18
920 931 0.942884 GGACACGAGGTGGTTTCGAC 60.943 60.000 1.31 0.00 40.36 4.20
921 932 1.364901 GGACACGAGGTGGTTTCGA 59.635 57.895 1.31 0.00 40.36 3.71
922 933 2.019951 CGGACACGAGGTGGTTTCG 61.020 63.158 0.42 0.00 44.60 3.46
923 934 1.068585 ACGGACACGAGGTGGTTTC 59.931 57.895 0.42 0.00 44.60 2.78
924 935 1.227438 CACGGACACGAGGTGGTTT 60.227 57.895 0.42 0.00 44.60 3.27
925 936 2.083835 CTCACGGACACGAGGTGGTT 62.084 60.000 0.42 0.00 44.60 3.67
926 937 2.520020 TCACGGACACGAGGTGGT 60.520 61.111 0.42 0.00 44.60 4.16
927 938 2.258591 CTCACGGACACGAGGTGG 59.741 66.667 0.42 0.00 44.60 4.61
928 939 2.258591 CCTCACGGACACGAGGTG 59.741 66.667 0.00 0.00 43.32 4.00
936 947 3.827898 CCTCTCGCCCTCACGGAC 61.828 72.222 0.00 0.00 0.00 4.79
989 1006 3.545703 CCCACCTCCATCACTCAATAAC 58.454 50.000 0.00 0.00 0.00 1.89
992 1009 0.921896 CCCCACCTCCATCACTCAAT 59.078 55.000 0.00 0.00 0.00 2.57
1017 1043 5.320277 CACTCTTCCCCTTTCTTCTTCAAT 58.680 41.667 0.00 0.00 0.00 2.57
1174 1203 3.764434 GGGAAGGAAGTGGAAGAAAATCC 59.236 47.826 0.00 0.00 40.10 3.01
1461 1497 0.251787 GCCAAGAAGGAACCCCATGT 60.252 55.000 0.00 0.00 41.22 3.21
1470 1506 1.075482 CCCAGCTTGCCAAGAAGGA 59.925 57.895 9.04 0.00 41.22 3.36
1690 1726 2.045926 GTCTTGATGGCAGGCCGT 60.046 61.111 4.34 4.34 39.42 5.68
1872 1929 0.915364 GAGCCTCCTGGGAAGACAAT 59.085 55.000 0.00 0.00 37.23 2.71
1892 1949 2.807967 CCATGATATGCTTGTACCACCG 59.192 50.000 0.00 0.00 0.00 4.94
1915 1972 4.712476 ACACCCTGAAATCTGATATCAGC 58.288 43.478 25.27 13.25 43.46 4.26
1918 1975 6.876257 GGATGTACACCCTGAAATCTGATATC 59.124 42.308 0.00 0.00 0.00 1.63
1934 1991 3.932710 TCAATCGCTTCTTGGATGTACAC 59.067 43.478 0.00 0.00 0.00 2.90
1993 2050 3.169733 GGACACGAATCTACGTCTGAAC 58.830 50.000 0.00 0.00 44.76 3.18
2008 2065 2.809601 GTACAGCCAGCGGACACG 60.810 66.667 0.00 0.00 44.63 4.49
2017 2074 0.882927 GCGTTGGAAGTGTACAGCCA 60.883 55.000 0.00 1.44 0.00 4.75
2020 2077 0.599204 ACGGCGTTGGAAGTGTACAG 60.599 55.000 6.77 0.00 0.00 2.74
2021 2078 0.672889 TACGGCGTTGGAAGTGTACA 59.327 50.000 21.24 0.00 0.00 2.90
2026 2083 0.108329 CTCCATACGGCGTTGGAAGT 60.108 55.000 29.76 7.17 41.36 3.01
2032 2089 1.663695 CAATTCCTCCATACGGCGTT 58.336 50.000 21.24 2.93 0.00 4.84
2041 2098 1.203162 ACCATGTTGGCAATTCCTCCA 60.203 47.619 1.92 0.00 42.67 3.86
2053 2110 2.223782 CCGGCCATCAATTACCATGTTG 60.224 50.000 2.24 0.00 0.00 3.33
2054 2111 2.031120 CCGGCCATCAATTACCATGTT 58.969 47.619 2.24 0.00 0.00 2.71
2129 2186 4.536090 ACATCCAGGTCCAAGAACAGATAA 59.464 41.667 0.00 0.00 0.00 1.75
2209 2266 3.005554 CACCTGGATGAAAGCTGTACAG 58.994 50.000 18.93 18.93 0.00 2.74
2339 2396 9.227777 GTGGTACCTTTTATCTTGTAGATGTTT 57.772 33.333 14.36 0.00 35.37 2.83
2412 2475 2.373502 AGCAGTCAAAGTTAGAAGGGCT 59.626 45.455 0.00 0.00 0.00 5.19
2523 2588 9.626045 TCTTTCTGTATATGCATATGTTAGTCG 57.374 33.333 26.21 11.66 0.00 4.18
2627 2692 4.908601 TGGATTGGTCTCACTAACACAT 57.091 40.909 0.00 0.00 0.00 3.21
2654 2719 3.111484 TGTAACCAGGTCTATGGCATCA 58.889 45.455 1.65 0.00 44.80 3.07
2716 2882 9.434420 CAAAATTGGTTAAAATGGAGCAGAATA 57.566 29.630 0.00 0.00 0.00 1.75
2829 3007 9.592196 AAAAGCATGACTAATAATATCCCATGT 57.408 29.630 0.00 0.00 34.21 3.21
2862 3040 2.279582 ACTCTGCTTCCACGATTACG 57.720 50.000 0.00 0.00 45.75 3.18
2912 3090 9.509855 TTTGAGTGATAACAACAACATGTTAAC 57.490 29.630 11.53 0.00 45.85 2.01
2937 3115 5.206587 AGGCCTCATCTCAAAAATATGCTT 58.793 37.500 0.00 0.00 0.00 3.91
3238 3422 4.518211 ACAGCAGGCATATCTTCAAATAGC 59.482 41.667 0.00 0.00 0.00 2.97
3293 3477 3.119352 GCTTCACCAAATCATCCTTCCAC 60.119 47.826 0.00 0.00 0.00 4.02
3349 3533 3.406764 ACTTTCTCCATGTCTTGCACTC 58.593 45.455 0.00 0.00 0.00 3.51
3448 3647 4.984785 CCACATCATCAATAGTACAGGACG 59.015 45.833 0.00 0.00 0.00 4.79
3462 3661 6.346919 GCAATAAGATCGTGTACCACATCATC 60.347 42.308 0.00 0.00 33.40 2.92
3476 3675 7.489435 TCTTTAGACTTGTCTGCAATAAGATCG 59.511 37.037 12.99 0.00 33.65 3.69
3695 3900 1.079503 GAAGGCTTAGCACACGAAGG 58.920 55.000 6.53 0.00 0.00 3.46
3709 3914 5.010012 CCACCATAACCAGATAATTGAAGGC 59.990 44.000 0.00 0.00 0.00 4.35
3739 3947 1.004277 TCCCAGTGAGGTTTATGGTGC 59.996 52.381 0.00 0.00 34.66 5.01
4067 4311 1.489481 TGCCATGTCCTGAGAGTAGG 58.511 55.000 0.00 0.00 39.29 3.18
4187 4431 2.036387 TCAAACACCTCGAGAAGTGGA 58.964 47.619 21.11 13.86 38.34 4.02
4273 4520 4.312443 CCTTGCTGCAATCTTCAAAATGT 58.688 39.130 16.38 0.00 0.00 2.71
4572 4828 2.310538 TGCATAGATCTCTCGAAGGCA 58.689 47.619 0.00 0.00 30.21 4.75
4578 4834 4.151335 CCCGATTTTTGCATAGATCTCTCG 59.849 45.833 0.00 0.00 0.00 4.04
4666 4922 0.877071 CACCAACTGCACACTGATCC 59.123 55.000 0.00 0.00 0.00 3.36
4715 4971 7.977853 ACCTCATCTTGTTCATTTTTATCATGC 59.022 33.333 0.00 0.00 0.00 4.06
4759 5015 8.540388 ACATAAGTAGCTTCTTCAAGTATCCAA 58.460 33.333 9.07 0.00 31.45 3.53
4841 5097 2.969262 TGAAACATTTTCCCCCAACTCC 59.031 45.455 0.00 0.00 0.00 3.85
4851 5107 5.574443 GCTTGCCAGATACTGAAACATTTTC 59.426 40.000 0.00 0.00 32.44 2.29
4951 5207 2.130395 GCTTTTGCCACTTCAAAGCTC 58.870 47.619 8.30 0.00 37.27 4.09
4974 5230 5.879223 GGTAGGATATCATTTCAGAGCCATG 59.121 44.000 4.83 0.00 0.00 3.66
4986 5242 5.221722 ACAATTCACGCTGGTAGGATATCAT 60.222 40.000 4.83 0.00 26.79 2.45
5069 5325 2.738587 TATCTTCTCCTCTGACGGCT 57.261 50.000 0.00 0.00 0.00 5.52
5123 5379 5.818887 TGGATGAGAGAAATCCATTGAACA 58.181 37.500 0.98 0.00 46.88 3.18
5303 5559 4.202419 ACTCCGCTGACAGAGATATCTAGT 60.202 45.833 6.65 7.60 34.13 2.57
5306 5562 2.884012 CACTCCGCTGACAGAGATATCT 59.116 50.000 4.47 4.47 34.13 1.98
5323 5579 2.363683 CAAGATGCCCTTCTTCCACTC 58.636 52.381 0.00 0.00 33.69 3.51
5387 5643 2.414994 CATCAGGAATCTGGTGCAGT 57.585 50.000 0.00 0.00 44.12 4.40
5432 5688 1.364171 CAGCCTAAGGATCCGGTCG 59.636 63.158 5.98 0.00 0.00 4.79
5458 5714 2.113139 CCACCTTGGGCGACAACT 59.887 61.111 0.00 0.00 34.76 3.16
5534 5790 3.371591 CAGTGTAGTAGTCGAGTGTCTCC 59.628 52.174 2.10 0.00 0.00 3.71
5540 5796 2.195741 TGGCAGTGTAGTAGTCGAGT 57.804 50.000 0.00 0.00 0.00 4.18
5597 5859 3.615155 CTCCATTTTGGTCCTCTCCTTC 58.385 50.000 0.00 0.00 39.03 3.46
5697 5959 4.107051 GCGCGCATTCCACTTGCT 62.107 61.111 29.10 0.00 37.96 3.91
5729 5991 1.507141 CCAGTGGCAACGGTCTGAAC 61.507 60.000 0.00 0.00 42.51 3.18
5744 6006 4.974438 TTCACCCGGGAGCCCAGT 62.974 66.667 32.02 0.00 35.37 4.00
5747 6009 3.327404 TCTTTCACCCGGGAGCCC 61.327 66.667 32.02 0.00 0.00 5.19
5755 6017 1.420138 TCCTGAGGTTGTCTTTCACCC 59.580 52.381 0.00 0.00 0.00 4.61
5786 6048 3.001127 GCCTGTAGTTCGACGAGTAGTAG 59.999 52.174 0.00 0.00 0.00 2.57
5829 6091 5.900123 CCCTATTCTTCCATCCGAGGTATAT 59.100 44.000 0.00 0.00 0.00 0.86
5853 6115 1.065928 CAGACGATACCACGAGGGC 59.934 63.158 3.29 0.00 42.05 5.19
5858 6120 1.490693 GCCATGCAGACGATACCACG 61.491 60.000 0.00 0.00 39.31 4.94
5864 6126 0.826715 ACTAGTGCCATGCAGACGAT 59.173 50.000 0.00 0.00 40.08 3.73
5870 6132 5.296531 CACATTATAACACTAGTGCCATGCA 59.703 40.000 22.90 7.85 35.60 3.96
5889 6157 5.547465 TGAAGTTGGTCGTTAGATCACATT 58.453 37.500 0.00 0.00 37.20 2.71
5931 6202 3.383185 TGGTTCAAAACAACCCAGATCAC 59.617 43.478 0.00 0.00 44.82 3.06
5934 6205 3.966665 ACATGGTTCAAAACAACCCAGAT 59.033 39.130 0.00 0.00 44.82 2.90
5962 6234 5.602628 AGAAACAGGTAGTTCAGAGTTCAC 58.397 41.667 0.00 0.00 40.26 3.18
5998 6276 9.778993 CCCATATCACGAAATATGATCAAATTC 57.221 33.333 17.56 4.06 40.55 2.17
6035 6313 8.787852 GTGTCTGAAACAGAGAAGGATAAAAAT 58.212 33.333 1.53 0.00 41.46 1.82
6117 6400 0.961019 TGTGGCCTCAACTCAATTGC 59.039 50.000 4.68 0.00 38.29 3.56
6121 6404 2.553028 GGAATCTGTGGCCTCAACTCAA 60.553 50.000 9.14 0.00 0.00 3.02
6189 6472 5.488919 TCAATCACCCTTCAGGACTTTCTAT 59.511 40.000 0.00 0.00 39.89 1.98
6190 6473 4.844085 TCAATCACCCTTCAGGACTTTCTA 59.156 41.667 0.00 0.00 39.89 2.10
6194 6481 2.040412 GGTCAATCACCCTTCAGGACTT 59.960 50.000 0.00 0.00 39.69 3.01
6243 6537 7.894708 TGCCTTGATATTGTTCTTCATTTCAA 58.105 30.769 0.00 0.00 0.00 2.69
6283 6577 7.552459 TGTAATCCGACTGATCATGACTTAAA 58.448 34.615 0.00 0.00 31.61 1.52
6297 6591 8.519799 AATCACCAATAATTTGTAATCCGACT 57.480 30.769 0.00 0.00 0.00 4.18
6412 6831 4.728534 TGTAGCCAATTGTTAATTCGTGC 58.271 39.130 4.43 0.00 0.00 5.34
6417 6836 6.946009 ACCTACACTGTAGCCAATTGTTAATT 59.054 34.615 10.36 0.00 0.00 1.40
6462 7499 4.943705 TCATTTTAGGTCAACCATGCTCTC 59.056 41.667 1.33 0.00 38.89 3.20
6464 7501 5.415701 TCTTCATTTTAGGTCAACCATGCTC 59.584 40.000 1.33 0.00 38.89 4.26
6468 7505 4.396166 CGCTCTTCATTTTAGGTCAACCAT 59.604 41.667 1.33 0.00 38.89 3.55
6494 7531 0.250338 AAGTCAAGCCTTCACCGGTC 60.250 55.000 2.59 0.00 0.00 4.79
6508 7545 6.543465 AGAACATGTCTTGAATGTTGAAGTCA 59.457 34.615 0.00 0.00 45.81 3.41
6559 7596 2.859273 ATTCAGGGCGAGCGGACAAG 62.859 60.000 0.00 0.00 0.00 3.16
6561 7598 3.371097 GATTCAGGGCGAGCGGACA 62.371 63.158 0.00 0.00 0.00 4.02
6568 7605 1.368641 CATTTGTCGATTCAGGGCGA 58.631 50.000 0.00 0.00 0.00 5.54
6576 7613 1.529438 ACGTTCACGCATTTGTCGATT 59.471 42.857 0.00 0.00 44.43 3.34
6578 7615 0.231024 CACGTTCACGCATTTGTCGA 59.769 50.000 0.00 0.00 44.43 4.20
6598 7635 5.357032 GTGGTGTTGGGAATAGGTATCAAAG 59.643 44.000 0.00 0.00 0.00 2.77
6637 7674 1.072331 AGCATCACAAACGGGAGTCTT 59.928 47.619 0.00 0.00 46.69 3.01
6703 7754 3.048337 TGCCAACCTAGGTTTAAGTCG 57.952 47.619 24.99 12.06 36.00 4.18
6725 7776 2.019984 CCACCCAAATTCTAGAGCAGC 58.980 52.381 0.00 0.00 0.00 5.25
6843 7894 4.806330 TGCACTTCTCTCCTAGTAAAACG 58.194 43.478 0.00 0.00 0.00 3.60
6854 7905 4.101741 AGGGGTGTAATATGCACTTCTCTC 59.898 45.833 9.60 0.00 37.07 3.20
6855 7906 4.040755 AGGGGTGTAATATGCACTTCTCT 58.959 43.478 9.60 0.00 37.07 3.10
6856 7907 4.141711 TGAGGGGTGTAATATGCACTTCTC 60.142 45.833 16.64 16.64 36.92 2.87
6857 7908 3.780294 TGAGGGGTGTAATATGCACTTCT 59.220 43.478 9.60 7.75 37.07 2.85
6858 7909 4.150897 TGAGGGGTGTAATATGCACTTC 57.849 45.455 9.60 6.88 37.07 3.01
6859 7910 4.018415 AGTTGAGGGGTGTAATATGCACTT 60.018 41.667 9.60 0.00 37.07 3.16
6860 7911 3.523564 AGTTGAGGGGTGTAATATGCACT 59.476 43.478 9.60 0.00 37.07 4.40
6861 7912 3.886123 AGTTGAGGGGTGTAATATGCAC 58.114 45.455 0.00 2.94 36.22 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.