Multiple sequence alignment - TraesCS5A01G323000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G323000 chr5A 100.000 2901 0 0 1 2901 535226281 535223381 0.000000e+00 5358.0
1 TraesCS5A01G323000 chr5A 91.463 82 7 0 2118 2199 19665409 19665328 2.360000e-21 113.0
2 TraesCS5A01G323000 chr5A 91.139 79 6 1 2795 2872 692767816 692767738 3.950000e-19 106.0
3 TraesCS5A01G323000 chr7D 92.127 851 61 5 1 847 623766236 623765388 0.000000e+00 1195.0
4 TraesCS5A01G323000 chr7D 89.189 851 77 8 1 847 533937030 533937869 0.000000e+00 1048.0
5 TraesCS5A01G323000 chr6D 92.047 855 58 8 1 847 401164685 401165537 0.000000e+00 1194.0
6 TraesCS5A01G323000 chr1D 91.392 848 60 8 1 845 449649256 449648419 0.000000e+00 1149.0
7 TraesCS5A01G323000 chr1D 90.382 863 65 11 1 847 269500107 269500967 0.000000e+00 1118.0
8 TraesCS5A01G323000 chr5D 86.430 1098 75 27 849 1903 421642085 421641019 0.000000e+00 1134.0
9 TraesCS5A01G323000 chr5D 90.640 844 67 6 9 847 362878290 362879126 0.000000e+00 1110.0
10 TraesCS5A01G323000 chr5D 81.694 366 24 13 2402 2739 421640619 421640269 6.160000e-67 265.0
11 TraesCS5A01G323000 chr4D 90.643 855 74 5 1 853 313502684 313501834 0.000000e+00 1131.0
12 TraesCS5A01G323000 chr4D 83.871 93 11 4 2795 2887 483044837 483044749 5.150000e-13 86.1
13 TraesCS5A01G323000 chr6A 90.577 849 69 5 1 847 15494511 15495350 0.000000e+00 1114.0
14 TraesCS5A01G323000 chr7A 89.097 853 87 6 1 851 6428712 6427864 0.000000e+00 1055.0
15 TraesCS5A01G323000 chr7A 88.732 71 8 0 2795 2865 188660307 188660237 1.430000e-13 87.9
16 TraesCS5A01G323000 chr7A 83.133 83 14 0 2117 2199 487714290 487714208 3.100000e-10 76.8
17 TraesCS5A01G323000 chr5B 91.543 674 54 3 970 1642 507979712 507979041 0.000000e+00 926.0
18 TraesCS5A01G323000 chr5B 78.636 440 38 20 2399 2792 507954282 507953853 1.040000e-59 241.0
19 TraesCS5A01G323000 chr5B 94.253 87 3 2 1648 1734 507978734 507978650 6.520000e-27 132.0
20 TraesCS5A01G323000 chr5B 80.374 107 18 2 2795 2901 473453845 473453742 8.620000e-11 78.7
21 TraesCS5A01G323000 chr3A 94.937 79 4 0 2118 2196 641635822 641635900 1.090000e-24 124.0
22 TraesCS5A01G323000 chr3A 91.667 72 6 0 2125 2196 41091351 41091422 1.840000e-17 100.0
23 TraesCS5A01G323000 chr3A 85.393 89 11 2 2797 2884 9940281 9940194 1.110000e-14 91.6
24 TraesCS5A01G323000 chr2D 85.321 109 15 1 2794 2901 476856040 476855932 8.500000e-21 111.0
25 TraesCS5A01G323000 chr2D 84.536 97 14 1 2791 2886 571230116 571230020 8.560000e-16 95.3
26 TraesCS5A01G323000 chr4A 89.157 83 9 0 2117 2199 175649137 175649055 1.420000e-18 104.0
27 TraesCS5A01G323000 chr1B 82.407 108 19 0 2792 2899 297327114 297327221 8.560000e-16 95.3
28 TraesCS5A01G323000 chr2A 84.146 82 13 0 2118 2199 21041460 21041379 2.400000e-11 80.5
29 TraesCS5A01G323000 chr2A 90.196 51 5 0 2149 2199 21041361 21041311 1.870000e-07 67.6
30 TraesCS5A01G323000 chr7B 82.222 90 16 0 2795 2884 151430853 151430942 8.620000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G323000 chr5A 535223381 535226281 2900 True 5358.0 5358 100.000 1 2901 1 chr5A.!!$R2 2900
1 TraesCS5A01G323000 chr7D 623765388 623766236 848 True 1195.0 1195 92.127 1 847 1 chr7D.!!$R1 846
2 TraesCS5A01G323000 chr7D 533937030 533937869 839 False 1048.0 1048 89.189 1 847 1 chr7D.!!$F1 846
3 TraesCS5A01G323000 chr6D 401164685 401165537 852 False 1194.0 1194 92.047 1 847 1 chr6D.!!$F1 846
4 TraesCS5A01G323000 chr1D 449648419 449649256 837 True 1149.0 1149 91.392 1 845 1 chr1D.!!$R1 844
5 TraesCS5A01G323000 chr1D 269500107 269500967 860 False 1118.0 1118 90.382 1 847 1 chr1D.!!$F1 846
6 TraesCS5A01G323000 chr5D 362878290 362879126 836 False 1110.0 1110 90.640 9 847 1 chr5D.!!$F1 838
7 TraesCS5A01G323000 chr5D 421640269 421642085 1816 True 699.5 1134 84.062 849 2739 2 chr5D.!!$R1 1890
8 TraesCS5A01G323000 chr4D 313501834 313502684 850 True 1131.0 1131 90.643 1 853 1 chr4D.!!$R1 852
9 TraesCS5A01G323000 chr6A 15494511 15495350 839 False 1114.0 1114 90.577 1 847 1 chr6A.!!$F1 846
10 TraesCS5A01G323000 chr7A 6427864 6428712 848 True 1055.0 1055 89.097 1 851 1 chr7A.!!$R1 850
11 TraesCS5A01G323000 chr5B 507978650 507979712 1062 True 529.0 926 92.898 970 1734 2 chr5B.!!$R3 764

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
641 670 0.039527 AAAAAGCCGCGAACATGTCC 60.04 50.0 8.23 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2234 2620 0.031994 AATGTTGTTCAACCGCTGCC 59.968 50.0 12.23 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 0.898789 TTCGGCTCCTCCTCGTCTTT 60.899 55.000 0.00 0.00 0.00 2.52
85 98 1.150135 ACTCTTCTTCCCACTCCTCCA 59.850 52.381 0.00 0.00 0.00 3.86
112 125 2.126850 CGCTGCTCGACGTCAAGA 60.127 61.111 17.16 4.61 41.67 3.02
316 330 2.667199 TGGAGCTCGACGACGACA 60.667 61.111 5.75 0.00 43.81 4.35
317 331 2.038837 TGGAGCTCGACGACGACAT 61.039 57.895 5.75 0.00 43.81 3.06
450 474 0.097150 TCATCGAAGACAGCGACGAG 59.903 55.000 0.00 0.00 42.51 4.18
641 670 0.039527 AAAAAGCCGCGAACATGTCC 60.040 50.000 8.23 0.00 0.00 4.02
660 689 6.849085 TGTCCAATATATGCCAAAGTTTGT 57.151 33.333 14.36 0.00 0.00 2.83
692 721 1.145803 GTGTTTAGCCGAACTTCGCT 58.854 50.000 5.61 9.02 38.82 4.93
698 727 2.470286 CCGAACTTCGCTGAACGC 59.530 61.111 5.61 0.00 43.23 4.84
773 803 1.149148 GGAAACCAACTCGTCTCAGC 58.851 55.000 0.00 0.00 0.00 4.26
774 804 1.540363 GGAAACCAACTCGTCTCAGCA 60.540 52.381 0.00 0.00 0.00 4.41
775 805 2.417719 GAAACCAACTCGTCTCAGCAT 58.582 47.619 0.00 0.00 0.00 3.79
797 830 4.947147 TTTTGCGCCGGCTCACCT 62.947 61.111 26.68 0.00 40.82 4.00
805 838 3.062466 CGGCTCACCTCCAGACGA 61.062 66.667 0.00 0.00 46.01 4.20
806 839 2.418910 CGGCTCACCTCCAGACGAT 61.419 63.158 0.00 0.00 46.01 3.73
820 853 1.139058 AGACGATGATTTTAGGCGCCT 59.861 47.619 34.85 34.85 0.00 5.52
825 859 2.779755 TGATTTTAGGCGCCTCTGAA 57.220 45.000 36.73 25.24 0.00 3.02
826 860 3.066291 TGATTTTAGGCGCCTCTGAAA 57.934 42.857 36.73 29.44 0.00 2.69
828 862 2.851263 TTTTAGGCGCCTCTGAAAGA 57.149 45.000 36.73 14.53 43.69 2.52
854 888 2.300152 CGGCTGGAGATGCTATAAGGAA 59.700 50.000 0.00 0.00 0.00 3.36
871 905 9.769093 CTATAAGGAAAACGGTTCAAAGTATTG 57.231 33.333 0.00 0.00 37.92 1.90
876 910 4.846779 AACGGTTCAAAGTATTGCATGT 57.153 36.364 0.00 0.00 36.45 3.21
893 927 8.659925 ATTGCATGTATTTTCAAGTGTTTTCA 57.340 26.923 0.00 0.00 0.00 2.69
945 979 1.409427 GGAGAACCTCATACGTCCCAG 59.591 57.143 0.00 0.00 31.08 4.45
946 980 2.100989 GAGAACCTCATACGTCCCAGT 58.899 52.381 0.00 0.00 0.00 4.00
947 981 2.099427 GAGAACCTCATACGTCCCAGTC 59.901 54.545 0.00 0.00 0.00 3.51
948 982 0.815734 AACCTCATACGTCCCAGTCG 59.184 55.000 0.00 0.00 0.00 4.18
950 984 1.065928 CTCATACGTCCCAGTCGGC 59.934 63.158 0.00 0.00 0.00 5.54
952 986 2.363276 ATACGTCCCAGTCGGCCA 60.363 61.111 2.24 0.00 0.00 5.36
953 987 2.423898 ATACGTCCCAGTCGGCCAG 61.424 63.158 2.24 0.00 0.00 4.85
954 988 3.873679 TACGTCCCAGTCGGCCAGT 62.874 63.158 2.24 0.00 0.00 4.00
955 989 4.436998 CGTCCCAGTCGGCCAGTC 62.437 72.222 2.24 0.00 0.00 3.51
956 990 4.083862 GTCCCAGTCGGCCAGTCC 62.084 72.222 2.24 0.00 0.00 3.85
957 991 4.631740 TCCCAGTCGGCCAGTCCA 62.632 66.667 2.24 0.00 34.01 4.02
958 992 4.394712 CCCAGTCGGCCAGTCCAC 62.395 72.222 2.24 0.00 34.01 4.02
959 993 3.625897 CCAGTCGGCCAGTCCACA 61.626 66.667 2.24 0.00 34.01 4.17
960 994 2.665000 CAGTCGGCCAGTCCACAT 59.335 61.111 2.24 0.00 34.01 3.21
961 995 1.448540 CAGTCGGCCAGTCCACATC 60.449 63.158 2.24 0.00 34.01 3.06
962 996 2.509336 GTCGGCCAGTCCACATCG 60.509 66.667 2.24 0.00 34.01 3.84
963 997 2.678580 TCGGCCAGTCCACATCGA 60.679 61.111 2.24 0.00 34.01 3.59
964 998 2.509336 CGGCCAGTCCACATCGAC 60.509 66.667 2.24 0.00 34.01 4.20
965 999 2.125106 GGCCAGTCCACATCGACC 60.125 66.667 0.00 0.00 32.91 4.79
966 1000 2.660064 GGCCAGTCCACATCGACCT 61.660 63.158 0.00 0.00 32.91 3.85
967 1001 1.296715 GCCAGTCCACATCGACCTT 59.703 57.895 0.00 0.00 32.91 3.50
968 1002 0.535335 GCCAGTCCACATCGACCTTA 59.465 55.000 0.00 0.00 32.91 2.69
996 1030 2.125106 GCTCCTTACCCCACGCAG 60.125 66.667 0.00 0.00 0.00 5.18
997 1031 2.125106 CTCCTTACCCCACGCAGC 60.125 66.667 0.00 0.00 0.00 5.25
1020 1054 0.179065 TGGCGATCTCCAAGCTCATG 60.179 55.000 0.76 0.00 32.18 3.07
1027 1061 0.102481 CTCCAAGCTCATGGCATTGC 59.898 55.000 12.65 12.65 44.79 3.56
1039 1073 0.523072 GGCATTGCTCTTCGCTTTCA 59.477 50.000 8.82 0.00 40.11 2.69
1044 1078 2.029844 GCTCTTCGCTTTCACGGCT 61.030 57.895 0.00 0.00 35.14 5.52
1080 1114 4.796231 CCGTCCGAAGCGAGGGTG 62.796 72.222 0.00 0.00 33.89 4.61
1081 1115 3.744719 CGTCCGAAGCGAGGGTGA 61.745 66.667 0.00 0.00 0.00 4.02
1231 1266 2.043953 GCTTTCCCTTCCCGCCAT 60.044 61.111 0.00 0.00 0.00 4.40
1236 1271 4.757355 CCCTTCCCGCCATTGCCA 62.757 66.667 0.00 0.00 0.00 4.92
1242 1277 2.484062 CCCGCCATTGCCACAGATC 61.484 63.158 0.00 0.00 0.00 2.75
1306 1342 2.045536 CTCCACCAGCTCAAGGCC 60.046 66.667 0.00 0.00 43.05 5.19
1331 1367 4.760047 CCTCCCACACTTCCCGCG 62.760 72.222 0.00 0.00 0.00 6.46
1445 1481 2.126463 CATCACCGTCGTCACGCT 60.126 61.111 0.00 0.00 45.29 5.07
1506 1542 4.479993 GCGCCCATCTGCCTCTGT 62.480 66.667 0.00 0.00 0.00 3.41
1542 1578 1.712977 GCATGAGCAAGCTCTTCCCG 61.713 60.000 21.35 6.53 43.12 5.14
1544 1580 0.107945 ATGAGCAAGCTCTTCCCGAC 60.108 55.000 21.35 0.00 43.12 4.79
1582 1618 3.804153 ATGCTCATCCTGCCGCTCG 62.804 63.158 0.00 0.00 0.00 5.03
1658 1996 4.204370 GCAGCTTTTACGTGTTTTGTTCTC 59.796 41.667 0.00 0.00 0.00 2.87
1690 2028 6.238076 CGTGTGGATCGTTAATGAATTCATGA 60.238 38.462 21.39 11.73 36.56 3.07
1714 2052 0.951040 GTTCGACAGCTCAACCCCTG 60.951 60.000 0.00 0.00 35.26 4.45
1775 2134 1.374758 GCTGGTTCTCCCGTGTCAG 60.375 63.158 0.00 0.00 35.15 3.51
1824 2183 3.125829 CCACGACAATCTGAATTCTGTGG 59.874 47.826 7.05 6.52 34.61 4.17
1830 2189 7.439356 ACGACAATCTGAATTCTGTGGTATATG 59.561 37.037 10.23 5.08 0.00 1.78
1831 2190 7.502120 ACAATCTGAATTCTGTGGTATATGC 57.498 36.000 7.05 0.00 0.00 3.14
1833 2192 5.276461 TCTGAATTCTGTGGTATATGCGT 57.724 39.130 7.05 0.00 0.00 5.24
1834 2193 5.049828 TCTGAATTCTGTGGTATATGCGTG 58.950 41.667 7.05 0.00 0.00 5.34
1836 2195 4.808895 TGAATTCTGTGGTATATGCGTGTC 59.191 41.667 7.05 0.00 0.00 3.67
1838 2197 1.411246 TCTGTGGTATATGCGTGTCCC 59.589 52.381 0.00 0.00 0.00 4.46
1840 2199 1.411246 TGTGGTATATGCGTGTCCCTC 59.589 52.381 0.00 0.00 0.00 4.30
1842 2201 2.889045 GTGGTATATGCGTGTCCCTCTA 59.111 50.000 0.00 0.00 0.00 2.43
1843 2202 3.319972 GTGGTATATGCGTGTCCCTCTAA 59.680 47.826 0.00 0.00 0.00 2.10
1848 2207 5.906113 ATATGCGTGTCCCTCTAATCTAG 57.094 43.478 0.00 0.00 0.00 2.43
1849 2208 2.307768 TGCGTGTCCCTCTAATCTAGG 58.692 52.381 0.00 0.00 0.00 3.02
1851 2210 2.554893 GCGTGTCCCTCTAATCTAGGAG 59.445 54.545 0.00 0.00 36.08 3.69
1855 2218 6.005198 CGTGTCCCTCTAATCTAGGAGTATT 58.995 44.000 0.00 0.00 36.08 1.89
1891 2255 4.978099 TCTGATTTTGTCTTTCAGAGGCT 58.022 39.130 0.00 0.00 40.59 4.58
1894 2258 5.132502 TGATTTTGTCTTTCAGAGGCTTCA 58.867 37.500 0.00 0.00 0.00 3.02
1899 2263 3.582647 TGTCTTTCAGAGGCTTCACCATA 59.417 43.478 0.00 0.00 43.14 2.74
1900 2264 4.041567 TGTCTTTCAGAGGCTTCACCATAA 59.958 41.667 0.00 0.00 43.14 1.90
1901 2265 5.003804 GTCTTTCAGAGGCTTCACCATAAA 58.996 41.667 0.00 0.00 43.14 1.40
1902 2266 5.473504 GTCTTTCAGAGGCTTCACCATAAAA 59.526 40.000 0.00 0.00 43.14 1.52
1903 2267 6.016276 GTCTTTCAGAGGCTTCACCATAAAAA 60.016 38.462 0.00 0.00 43.14 1.94
1929 2293 8.482852 AAAGGGAAAAAGAAAGAAGATGATGA 57.517 30.769 0.00 0.00 0.00 2.92
1934 2298 7.763071 GGAAAAAGAAAGAAGATGATGAATGGG 59.237 37.037 0.00 0.00 0.00 4.00
1936 2300 8.884124 AAAAGAAAGAAGATGATGAATGGGTA 57.116 30.769 0.00 0.00 0.00 3.69
1939 2303 6.388100 AGAAAGAAGATGATGAATGGGTAGGA 59.612 38.462 0.00 0.00 0.00 2.94
1943 2307 6.561838 AGAAGATGATGAATGGGTAGGAGAAT 59.438 38.462 0.00 0.00 0.00 2.40
1944 2308 6.124316 AGATGATGAATGGGTAGGAGAATG 57.876 41.667 0.00 0.00 0.00 2.67
1945 2309 4.712051 TGATGAATGGGTAGGAGAATGG 57.288 45.455 0.00 0.00 0.00 3.16
1947 2311 4.478317 TGATGAATGGGTAGGAGAATGGTT 59.522 41.667 0.00 0.00 0.00 3.67
1949 2313 4.855340 TGAATGGGTAGGAGAATGGTTTC 58.145 43.478 0.00 0.00 0.00 2.78
1950 2314 3.560636 ATGGGTAGGAGAATGGTTTCG 57.439 47.619 0.00 0.00 36.93 3.46
1952 2316 2.027561 TGGGTAGGAGAATGGTTTCGTG 60.028 50.000 0.00 0.00 36.93 4.35
1953 2317 2.235402 GGGTAGGAGAATGGTTTCGTGA 59.765 50.000 0.00 0.00 36.93 4.35
1954 2318 3.307199 GGGTAGGAGAATGGTTTCGTGAA 60.307 47.826 0.00 0.00 36.93 3.18
1955 2319 3.933332 GGTAGGAGAATGGTTTCGTGAAG 59.067 47.826 0.00 0.00 36.93 3.02
1957 2321 3.931578 AGGAGAATGGTTTCGTGAAGAG 58.068 45.455 0.00 0.00 36.93 2.85
1958 2322 3.325135 AGGAGAATGGTTTCGTGAAGAGT 59.675 43.478 0.00 0.00 36.93 3.24
1960 2324 5.187967 AGGAGAATGGTTTCGTGAAGAGTAT 59.812 40.000 0.00 0.00 36.93 2.12
1961 2325 5.875359 GGAGAATGGTTTCGTGAAGAGTATT 59.125 40.000 0.00 0.00 36.93 1.89
1962 2326 6.371825 GGAGAATGGTTTCGTGAAGAGTATTT 59.628 38.462 0.00 0.00 36.93 1.40
1963 2327 7.548075 GGAGAATGGTTTCGTGAAGAGTATTTA 59.452 37.037 0.00 0.00 36.93 1.40
1964 2328 8.252964 AGAATGGTTTCGTGAAGAGTATTTAC 57.747 34.615 0.00 0.00 36.93 2.01
1965 2329 8.095169 AGAATGGTTTCGTGAAGAGTATTTACT 58.905 33.333 0.00 0.00 36.74 2.24
2007 2371 3.251487 GCCGCTTTAGTTTTACCAAGACA 59.749 43.478 0.00 0.00 0.00 3.41
2009 2373 5.390613 CCGCTTTAGTTTTACCAAGACATG 58.609 41.667 0.00 0.00 0.00 3.21
2010 2374 5.180492 CCGCTTTAGTTTTACCAAGACATGA 59.820 40.000 0.00 0.00 0.00 3.07
2011 2375 6.128007 CCGCTTTAGTTTTACCAAGACATGAT 60.128 38.462 0.00 0.00 0.00 2.45
2013 2377 7.903431 CGCTTTAGTTTTACCAAGACATGATAC 59.097 37.037 0.00 0.00 0.00 2.24
2018 2382 7.565680 AGTTTTACCAAGACATGATACTAGGG 58.434 38.462 0.00 4.43 0.00 3.53
2020 2384 7.931015 TTTACCAAGACATGATACTAGGGAT 57.069 36.000 0.00 0.00 0.00 3.85
2021 2385 9.442062 TTTTACCAAGACATGATACTAGGGATA 57.558 33.333 0.00 0.00 0.00 2.59
2023 2387 7.546250 ACCAAGACATGATACTAGGGATAAG 57.454 40.000 0.00 0.00 0.00 1.73
2026 2390 8.474025 CCAAGACATGATACTAGGGATAAGATC 58.526 40.741 0.00 0.00 0.00 2.75
2027 2391 9.253832 CAAGACATGATACTAGGGATAAGATCT 57.746 37.037 0.00 0.00 0.00 2.75
2029 2393 8.619281 AGACATGATACTAGGGATAAGATCTCA 58.381 37.037 0.00 0.00 30.04 3.27
2030 2394 9.420118 GACATGATACTAGGGATAAGATCTCAT 57.580 37.037 0.00 0.00 30.04 2.90
2031 2395 9.420118 ACATGATACTAGGGATAAGATCTCATC 57.580 37.037 0.00 0.00 30.04 2.92
2032 2396 8.567104 CATGATACTAGGGATAAGATCTCATCG 58.433 40.741 0.00 0.00 30.04 3.84
2033 2397 7.634718 TGATACTAGGGATAAGATCTCATCGT 58.365 38.462 0.00 0.00 30.04 3.73
2034 2398 8.110271 TGATACTAGGGATAAGATCTCATCGTT 58.890 37.037 0.00 0.00 30.04 3.85
2035 2399 8.887264 ATACTAGGGATAAGATCTCATCGTTT 57.113 34.615 0.00 0.00 30.04 3.60
2036 2400 7.222000 ACTAGGGATAAGATCTCATCGTTTC 57.778 40.000 0.00 0.00 30.04 2.78
2037 2401 5.127693 AGGGATAAGATCTCATCGTTTCG 57.872 43.478 0.00 0.00 30.04 3.46
2045 2409 5.962433 AGATCTCATCGTTTCGGAGTTTAA 58.038 37.500 0.00 0.00 0.00 1.52
2047 2411 7.042335 AGATCTCATCGTTTCGGAGTTTAAAT 58.958 34.615 0.00 0.00 0.00 1.40
2053 2417 4.389687 TCGTTTCGGAGTTTAAATAGCCAC 59.610 41.667 0.00 0.00 0.00 5.01
2054 2418 4.436451 CGTTTCGGAGTTTAAATAGCCACC 60.436 45.833 0.00 0.00 0.00 4.61
2067 2431 2.730934 AGCCACCGAGAGTATAGTCA 57.269 50.000 10.21 0.00 0.00 3.41
2071 2435 3.551046 GCCACCGAGAGTATAGTCATGTG 60.551 52.174 10.21 12.03 0.00 3.21
2111 2497 9.541143 ACATTCGTTATTTGAATTCTTTGGTTT 57.459 25.926 7.05 0.00 33.91 3.27
2114 2500 8.716619 TCGTTATTTGAATTCTTTGGTTTACG 57.283 30.769 7.05 6.74 0.00 3.18
2115 2501 7.324135 TCGTTATTTGAATTCTTTGGTTTACGC 59.676 33.333 7.05 0.00 0.00 4.42
2116 2502 7.433979 GTTATTTGAATTCTTTGGTTTACGCG 58.566 34.615 3.53 3.53 0.00 6.01
2117 2503 3.546002 TGAATTCTTTGGTTTACGCGG 57.454 42.857 12.47 0.00 0.00 6.46
2118 2504 2.226912 TGAATTCTTTGGTTTACGCGGG 59.773 45.455 12.47 0.00 0.00 6.13
2119 2505 2.188062 ATTCTTTGGTTTACGCGGGA 57.812 45.000 12.47 0.00 0.00 5.14
2120 2506 1.228533 TTCTTTGGTTTACGCGGGAC 58.771 50.000 12.47 5.57 0.00 4.46
2121 2507 0.106335 TCTTTGGTTTACGCGGGACA 59.894 50.000 12.47 0.00 0.00 4.02
2122 2508 0.945813 CTTTGGTTTACGCGGGACAA 59.054 50.000 12.47 5.44 0.00 3.18
2123 2509 1.538075 CTTTGGTTTACGCGGGACAAT 59.462 47.619 12.47 0.00 0.00 2.71
2124 2510 0.875728 TTGGTTTACGCGGGACAATG 59.124 50.000 12.47 0.00 0.00 2.82
2125 2511 1.135939 GGTTTACGCGGGACAATGC 59.864 57.895 12.47 0.00 0.00 3.56
2126 2512 1.303091 GGTTTACGCGGGACAATGCT 61.303 55.000 12.47 0.00 0.00 3.79
2127 2513 0.519961 GTTTACGCGGGACAATGCTT 59.480 50.000 12.47 0.00 0.00 3.91
2128 2514 0.800012 TTTACGCGGGACAATGCTTC 59.200 50.000 12.47 0.00 0.00 3.86
2129 2515 1.355796 TTACGCGGGACAATGCTTCG 61.356 55.000 12.47 0.00 0.00 3.79
2130 2516 3.864686 CGCGGGACAATGCTTCGG 61.865 66.667 0.00 0.00 0.00 4.30
2131 2517 2.746277 GCGGGACAATGCTTCGGT 60.746 61.111 0.00 0.00 0.00 4.69
2132 2518 3.039202 GCGGGACAATGCTTCGGTG 62.039 63.158 0.00 0.00 0.00 4.94
2133 2519 2.877691 GGGACAATGCTTCGGTGC 59.122 61.111 0.00 0.00 0.00 5.01
2134 2520 1.675641 GGGACAATGCTTCGGTGCT 60.676 57.895 2.64 0.00 0.00 4.40
2135 2521 1.244019 GGGACAATGCTTCGGTGCTT 61.244 55.000 2.64 0.00 0.00 3.91
2136 2522 0.598065 GGACAATGCTTCGGTGCTTT 59.402 50.000 2.64 0.23 0.00 3.51
2137 2523 1.810151 GGACAATGCTTCGGTGCTTTA 59.190 47.619 2.64 0.00 0.00 1.85
2138 2524 2.227865 GGACAATGCTTCGGTGCTTTAA 59.772 45.455 2.64 0.00 0.00 1.52
2139 2525 3.492313 GACAATGCTTCGGTGCTTTAAG 58.508 45.455 2.64 0.00 0.00 1.85
2140 2526 2.228822 ACAATGCTTCGGTGCTTTAAGG 59.771 45.455 0.00 0.00 0.00 2.69
2141 2527 0.811281 ATGCTTCGGTGCTTTAAGGC 59.189 50.000 1.97 1.97 0.00 4.35
2142 2528 0.536233 TGCTTCGGTGCTTTAAGGCA 60.536 50.000 8.37 8.37 40.15 4.75
2143 2529 0.811281 GCTTCGGTGCTTTAAGGCAT 59.189 50.000 15.90 0.00 44.34 4.40
2144 2530 1.202188 GCTTCGGTGCTTTAAGGCATC 60.202 52.381 15.90 14.18 44.34 3.91
2145 2531 2.359900 CTTCGGTGCTTTAAGGCATCT 58.640 47.619 19.28 0.00 44.34 2.90
2146 2532 1.737838 TCGGTGCTTTAAGGCATCTG 58.262 50.000 19.28 15.12 44.34 2.90
2147 2533 1.003118 TCGGTGCTTTAAGGCATCTGT 59.997 47.619 19.28 0.00 44.34 3.41
2148 2534 1.398390 CGGTGCTTTAAGGCATCTGTC 59.602 52.381 19.28 5.09 44.34 3.51
2149 2535 2.716217 GGTGCTTTAAGGCATCTGTCT 58.284 47.619 15.90 0.00 44.34 3.41
2150 2536 3.084786 GGTGCTTTAAGGCATCTGTCTT 58.915 45.455 15.90 2.24 44.34 3.01
2151 2537 3.507622 GGTGCTTTAAGGCATCTGTCTTT 59.492 43.478 15.90 0.00 44.34 2.52
2152 2538 4.479619 GTGCTTTAAGGCATCTGTCTTTG 58.520 43.478 15.90 0.00 44.34 2.77
2153 2539 4.022849 GTGCTTTAAGGCATCTGTCTTTGT 60.023 41.667 15.90 0.00 44.34 2.83
2154 2540 4.022935 TGCTTTAAGGCATCTGTCTTTGTG 60.023 41.667 8.37 0.00 40.86 3.33
2155 2541 4.022849 GCTTTAAGGCATCTGTCTTTGTGT 60.023 41.667 4.44 0.00 40.86 3.72
2156 2542 5.689383 TTTAAGGCATCTGTCTTTGTGTC 57.311 39.130 1.90 0.00 40.86 3.67
2157 2543 3.498774 AAGGCATCTGTCTTTGTGTCT 57.501 42.857 0.00 0.00 36.42 3.41
2158 2544 4.623932 AAGGCATCTGTCTTTGTGTCTA 57.376 40.909 0.00 0.00 36.42 2.59
2159 2545 4.833478 AGGCATCTGTCTTTGTGTCTAT 57.167 40.909 0.00 0.00 0.00 1.98
2160 2546 4.511527 AGGCATCTGTCTTTGTGTCTATG 58.488 43.478 0.00 0.00 0.00 2.23
2161 2547 4.223700 AGGCATCTGTCTTTGTGTCTATGA 59.776 41.667 0.00 0.00 0.00 2.15
2162 2548 4.331168 GGCATCTGTCTTTGTGTCTATGAC 59.669 45.833 0.00 0.00 0.00 3.06
2163 2549 4.931601 GCATCTGTCTTTGTGTCTATGACA 59.068 41.667 0.00 0.00 40.50 3.58
2164 2550 5.583854 GCATCTGTCTTTGTGTCTATGACAT 59.416 40.000 3.65 0.00 44.63 3.06
2165 2551 6.456584 GCATCTGTCTTTGTGTCTATGACATG 60.457 42.308 3.65 0.00 44.63 3.21
2166 2552 6.101650 TCTGTCTTTGTGTCTATGACATGT 57.898 37.500 0.00 0.00 44.63 3.21
2167 2553 5.928264 TCTGTCTTTGTGTCTATGACATGTG 59.072 40.000 1.15 0.00 44.63 3.21
2168 2554 4.996758 TGTCTTTGTGTCTATGACATGTGG 59.003 41.667 1.15 0.00 44.63 4.17
2169 2555 5.221621 TGTCTTTGTGTCTATGACATGTGGA 60.222 40.000 1.15 0.00 44.63 4.02
2170 2556 5.120830 GTCTTTGTGTCTATGACATGTGGAC 59.879 44.000 1.15 6.97 44.63 4.02
2171 2557 3.610040 TGTGTCTATGACATGTGGACC 57.390 47.619 1.15 2.16 44.63 4.46
2172 2558 2.236146 TGTGTCTATGACATGTGGACCC 59.764 50.000 1.15 0.00 44.63 4.46
2173 2559 2.236146 GTGTCTATGACATGTGGACCCA 59.764 50.000 1.15 0.00 44.63 4.51
2174 2560 2.909662 TGTCTATGACATGTGGACCCAA 59.090 45.455 1.15 0.00 37.67 4.12
2175 2561 3.270877 GTCTATGACATGTGGACCCAAC 58.729 50.000 1.15 0.00 32.09 3.77
2176 2562 2.909662 TCTATGACATGTGGACCCAACA 59.090 45.455 1.15 0.00 0.00 3.33
2177 2563 2.205022 ATGACATGTGGACCCAACAG 57.795 50.000 1.15 0.00 0.00 3.16
2178 2564 0.110295 TGACATGTGGACCCAACAGG 59.890 55.000 1.15 0.00 43.78 4.00
2179 2565 1.228552 ACATGTGGACCCAACAGGC 60.229 57.895 0.00 0.00 40.58 4.85
2180 2566 2.034066 ATGTGGACCCAACAGGCG 59.966 61.111 0.00 0.00 40.58 5.52
2181 2567 3.567579 ATGTGGACCCAACAGGCGG 62.568 63.158 0.00 0.00 40.58 6.13
2189 2575 4.641645 CAACAGGCGGCTGGTCCA 62.642 66.667 37.97 0.00 34.01 4.02
2190 2576 4.643387 AACAGGCGGCTGGTCCAC 62.643 66.667 37.97 0.00 34.01 4.02
2192 2578 4.415150 CAGGCGGCTGGTCCACAT 62.415 66.667 30.03 0.00 34.01 3.21
2193 2579 4.415150 AGGCGGCTGGTCCACATG 62.415 66.667 12.25 0.00 34.01 3.21
2194 2580 4.722700 GGCGGCTGGTCCACATGT 62.723 66.667 0.00 0.00 34.01 3.21
2195 2581 3.127533 GCGGCTGGTCCACATGTC 61.128 66.667 0.00 0.00 34.01 3.06
2196 2582 2.436646 CGGCTGGTCCACATGTCC 60.437 66.667 0.00 0.00 34.01 4.02
2197 2583 2.436646 GGCTGGTCCACATGTCCG 60.437 66.667 0.00 0.00 34.01 4.79
2198 2584 2.347490 GCTGGTCCACATGTCCGT 59.653 61.111 0.00 0.00 0.00 4.69
2199 2585 1.302511 GCTGGTCCACATGTCCGTT 60.303 57.895 0.00 0.00 0.00 4.44
2200 2586 0.889186 GCTGGTCCACATGTCCGTTT 60.889 55.000 0.00 0.00 0.00 3.60
2201 2587 0.874390 CTGGTCCACATGTCCGTTTG 59.126 55.000 0.00 0.00 0.00 2.93
2202 2588 0.181587 TGGTCCACATGTCCGTTTGT 59.818 50.000 0.00 0.00 0.00 2.83
2203 2589 0.591170 GGTCCACATGTCCGTTTGTG 59.409 55.000 0.00 0.00 42.25 3.33
2204 2590 1.305201 GTCCACATGTCCGTTTGTGT 58.695 50.000 0.00 0.00 41.27 3.72
2205 2591 1.002900 GTCCACATGTCCGTTTGTGTG 60.003 52.381 0.00 0.00 41.27 3.82
2206 2592 1.134371 TCCACATGTCCGTTTGTGTGA 60.134 47.619 0.00 0.00 43.41 3.58
2207 2593 1.879380 CCACATGTCCGTTTGTGTGAT 59.121 47.619 0.00 0.00 43.41 3.06
2208 2594 2.350676 CCACATGTCCGTTTGTGTGATG 60.351 50.000 0.00 0.00 43.41 3.07
2209 2595 1.879380 ACATGTCCGTTTGTGTGATGG 59.121 47.619 0.00 0.00 0.00 3.51
2210 2596 0.881118 ATGTCCGTTTGTGTGATGGC 59.119 50.000 0.00 0.00 0.00 4.40
2211 2597 1.206578 GTCCGTTTGTGTGATGGCG 59.793 57.895 0.00 0.00 0.00 5.69
2212 2598 1.069935 TCCGTTTGTGTGATGGCGA 59.930 52.632 0.00 0.00 0.00 5.54
2213 2599 0.948623 TCCGTTTGTGTGATGGCGAG 60.949 55.000 0.00 0.00 0.00 5.03
2214 2600 0.948623 CCGTTTGTGTGATGGCGAGA 60.949 55.000 0.00 0.00 0.00 4.04
2215 2601 0.865111 CGTTTGTGTGATGGCGAGAA 59.135 50.000 0.00 0.00 0.00 2.87
2216 2602 1.464608 CGTTTGTGTGATGGCGAGAAT 59.535 47.619 0.00 0.00 0.00 2.40
2217 2603 2.725759 CGTTTGTGTGATGGCGAGAATG 60.726 50.000 0.00 0.00 0.00 2.67
2218 2604 0.804364 TTGTGTGATGGCGAGAATGC 59.196 50.000 0.00 0.00 0.00 3.56
2243 2748 1.098712 TTTTCTGTTCGGCAGCGGTT 61.099 50.000 0.00 0.00 44.66 4.44
2251 2756 2.829206 CGGCAGCGGTTGAACAACA 61.829 57.895 17.43 0.00 42.85 3.33
2260 2765 3.225548 CGGTTGAACAACATTCACATCG 58.774 45.455 17.43 7.04 42.85 3.84
2276 2781 0.534412 ATCGTCAGAGACCTTGGCTG 59.466 55.000 0.00 0.00 0.00 4.85
2277 2782 1.739562 CGTCAGAGACCTTGGCTGC 60.740 63.158 0.00 0.00 0.00 5.25
2278 2783 1.372683 GTCAGAGACCTTGGCTGCA 59.627 57.895 0.50 0.00 0.00 4.41
2279 2784 0.250467 GTCAGAGACCTTGGCTGCAA 60.250 55.000 0.50 0.00 0.00 4.08
2280 2785 0.250467 TCAGAGACCTTGGCTGCAAC 60.250 55.000 0.50 0.00 0.00 4.17
2281 2786 1.073897 AGAGACCTTGGCTGCAACC 59.926 57.895 0.00 0.00 0.00 3.77
2282 2787 1.073897 GAGACCTTGGCTGCAACCT 59.926 57.895 7.82 0.00 0.00 3.50
2283 2788 0.324943 GAGACCTTGGCTGCAACCTA 59.675 55.000 7.82 0.00 0.00 3.08
2286 2791 1.001641 CCTTGGCTGCAACCTAGCT 60.002 57.895 11.59 0.00 40.92 3.32
2287 2792 0.253044 CCTTGGCTGCAACCTAGCTA 59.747 55.000 11.59 0.00 40.92 3.32
2288 2793 1.340017 CCTTGGCTGCAACCTAGCTAA 60.340 52.381 11.59 3.08 40.92 3.09
2290 2795 0.035439 TGGCTGCAACCTAGCTAACC 60.035 55.000 7.82 0.00 40.92 2.85
2292 2797 1.087501 GCTGCAACCTAGCTAACCAC 58.912 55.000 0.00 0.00 38.14 4.16
2293 2798 1.610624 GCTGCAACCTAGCTAACCACA 60.611 52.381 0.00 0.00 38.14 4.17
2295 2800 1.087501 GCAACCTAGCTAACCACAGC 58.912 55.000 0.00 0.00 42.12 4.40
2301 2806 4.701663 GCTAACCACAGCTGAGCA 57.298 55.556 23.35 0.00 38.57 4.26
2302 2807 3.165606 GCTAACCACAGCTGAGCAT 57.834 52.632 23.35 6.44 38.57 3.79
2303 2808 0.731417 GCTAACCACAGCTGAGCATG 59.269 55.000 23.35 8.00 38.57 4.06
2304 2809 0.731417 CTAACCACAGCTGAGCATGC 59.269 55.000 23.35 10.51 0.00 4.06
2305 2810 0.036590 TAACCACAGCTGAGCATGCA 59.963 50.000 23.35 0.00 0.00 3.96
2306 2811 0.611062 AACCACAGCTGAGCATGCAT 60.611 50.000 23.35 4.75 0.00 3.96
2307 2812 1.313091 ACCACAGCTGAGCATGCATG 61.313 55.000 23.35 22.70 0.00 4.06
2319 2824 2.665649 CATGCATGCATGTCCAAGTT 57.334 45.000 40.30 14.92 46.20 2.66
2320 2825 2.967362 CATGCATGCATGTCCAAGTTT 58.033 42.857 40.30 14.19 46.20 2.66
2321 2826 3.331150 CATGCATGCATGTCCAAGTTTT 58.669 40.909 40.30 13.68 46.20 2.43
2322 2827 3.472283 TGCATGCATGTCCAAGTTTTT 57.528 38.095 26.79 0.00 0.00 1.94
2340 2845 4.597404 TTTTTGTTGGTGATAGCATGCA 57.403 36.364 21.98 6.36 0.00 3.96
2341 2846 4.804868 TTTTGTTGGTGATAGCATGCAT 57.195 36.364 21.98 11.35 0.00 3.96
2342 2847 3.786516 TTGTTGGTGATAGCATGCATG 57.213 42.857 22.70 22.70 0.00 4.06
2343 2848 2.725637 TGTTGGTGATAGCATGCATGT 58.274 42.857 26.79 16.07 0.00 3.21
2344 2849 2.684374 TGTTGGTGATAGCATGCATGTC 59.316 45.455 26.79 18.66 0.00 3.06
2345 2850 1.971481 TGGTGATAGCATGCATGTCC 58.029 50.000 26.79 18.19 0.00 4.02
2346 2851 1.212441 TGGTGATAGCATGCATGTCCA 59.788 47.619 26.79 20.11 0.00 4.02
2347 2852 2.300433 GGTGATAGCATGCATGTCCAA 58.700 47.619 26.79 11.08 0.00 3.53
2348 2853 2.292569 GGTGATAGCATGCATGTCCAAG 59.707 50.000 26.79 1.59 0.00 3.61
2349 2854 2.947652 GTGATAGCATGCATGTCCAAGT 59.052 45.455 26.79 8.45 0.00 3.16
2350 2855 3.379372 GTGATAGCATGCATGTCCAAGTT 59.621 43.478 26.79 6.37 0.00 2.66
2351 2856 3.379057 TGATAGCATGCATGTCCAAGTTG 59.621 43.478 26.79 0.85 0.00 3.16
2352 2857 1.624336 AGCATGCATGTCCAAGTTGT 58.376 45.000 26.79 0.54 0.00 3.32
2353 2858 1.271379 AGCATGCATGTCCAAGTTGTG 59.729 47.619 26.79 0.00 0.00 3.33
2354 2859 1.000060 GCATGCATGTCCAAGTTGTGT 60.000 47.619 26.79 0.00 0.00 3.72
2355 2860 2.546373 GCATGCATGTCCAAGTTGTGTT 60.546 45.455 26.79 0.00 0.00 3.32
2356 2861 3.719924 CATGCATGTCCAAGTTGTGTTT 58.280 40.909 18.91 0.00 0.00 2.83
2357 2862 3.883830 TGCATGTCCAAGTTGTGTTTT 57.116 38.095 1.45 0.00 0.00 2.43
2358 2863 4.199432 TGCATGTCCAAGTTGTGTTTTT 57.801 36.364 1.45 0.00 0.00 1.94
2359 2864 5.330455 TGCATGTCCAAGTTGTGTTTTTA 57.670 34.783 1.45 0.00 0.00 1.52
2360 2865 5.347342 TGCATGTCCAAGTTGTGTTTTTAG 58.653 37.500 1.45 0.00 0.00 1.85
2361 2866 4.744631 GCATGTCCAAGTTGTGTTTTTAGG 59.255 41.667 1.45 0.00 0.00 2.69
2362 2867 4.379339 TGTCCAAGTTGTGTTTTTAGGC 57.621 40.909 1.45 0.00 0.00 3.93
2363 2868 3.764434 TGTCCAAGTTGTGTTTTTAGGCA 59.236 39.130 1.45 0.00 0.00 4.75
2364 2869 4.220821 TGTCCAAGTTGTGTTTTTAGGCAA 59.779 37.500 1.45 0.00 0.00 4.52
2365 2870 5.172205 GTCCAAGTTGTGTTTTTAGGCAAA 58.828 37.500 1.45 0.00 0.00 3.68
2366 2871 5.815222 GTCCAAGTTGTGTTTTTAGGCAAAT 59.185 36.000 1.45 0.00 0.00 2.32
2367 2872 5.814705 TCCAAGTTGTGTTTTTAGGCAAATG 59.185 36.000 1.45 0.00 0.00 2.32
2368 2873 5.500825 CAAGTTGTGTTTTTAGGCAAATGC 58.499 37.500 0.00 0.00 41.14 3.56
2369 2874 4.764172 AGTTGTGTTTTTAGGCAAATGCA 58.236 34.783 7.80 0.00 44.36 3.96
2370 2875 5.367302 AGTTGTGTTTTTAGGCAAATGCAT 58.633 33.333 7.80 2.33 44.36 3.96
2371 2876 5.236911 AGTTGTGTTTTTAGGCAAATGCATG 59.763 36.000 0.00 0.00 44.36 4.06
2372 2877 4.701765 TGTGTTTTTAGGCAAATGCATGT 58.298 34.783 0.00 0.00 44.36 3.21
2373 2878 4.749099 TGTGTTTTTAGGCAAATGCATGTC 59.251 37.500 0.00 0.00 44.36 3.06
2374 2879 4.152223 GTGTTTTTAGGCAAATGCATGTCC 59.848 41.667 0.00 1.64 44.36 4.02
2375 2880 4.202295 TGTTTTTAGGCAAATGCATGTCCA 60.202 37.500 0.00 0.00 44.36 4.02
2376 2881 4.822685 TTTTAGGCAAATGCATGTCCAT 57.177 36.364 0.00 0.00 44.36 3.41
2377 2882 3.804786 TTAGGCAAATGCATGTCCATG 57.195 42.857 0.00 2.86 44.36 3.66
2378 2883 1.563924 AGGCAAATGCATGTCCATGT 58.436 45.000 0.00 0.00 44.36 3.21
2379 2884 2.737544 AGGCAAATGCATGTCCATGTA 58.262 42.857 0.00 4.91 44.36 2.29
2380 2885 2.691526 AGGCAAATGCATGTCCATGTAG 59.308 45.455 0.00 0.00 44.36 2.74
2381 2886 2.223876 GGCAAATGCATGTCCATGTAGG 60.224 50.000 0.00 0.93 44.36 3.18
2382 2887 2.800629 GCAAATGCATGTCCATGTAGGC 60.801 50.000 0.00 6.46 40.80 3.93
2383 2888 2.427812 CAAATGCATGTCCATGTAGGCA 59.572 45.455 0.00 4.14 40.80 4.75
2384 2889 1.683943 ATGCATGTCCATGTAGGCAC 58.316 50.000 0.00 0.00 40.80 5.01
2385 2890 0.394216 TGCATGTCCATGTAGGCACC 60.394 55.000 8.91 0.00 40.80 5.01
2386 2891 0.394216 GCATGTCCATGTAGGCACCA 60.394 55.000 8.91 0.00 40.80 4.17
2387 2892 1.751733 GCATGTCCATGTAGGCACCAT 60.752 52.381 8.91 0.00 40.80 3.55
2388 2893 1.951602 CATGTCCATGTAGGCACCATG 59.048 52.381 8.85 8.85 39.50 3.66
2389 2894 0.991146 TGTCCATGTAGGCACCATGT 59.009 50.000 13.23 0.00 38.39 3.21
2390 2895 1.065491 TGTCCATGTAGGCACCATGTC 60.065 52.381 13.23 8.06 38.39 3.06
2391 2896 0.546122 TCCATGTAGGCACCATGTCC 59.454 55.000 13.23 0.00 38.39 4.02
2392 2897 0.255604 CCATGTAGGCACCATGTCCA 59.744 55.000 13.23 0.00 38.39 4.02
2393 2898 1.671979 CATGTAGGCACCATGTCCAG 58.328 55.000 7.90 0.00 35.94 3.86
2394 2899 0.548031 ATGTAGGCACCATGTCCAGG 59.452 55.000 0.00 0.00 0.00 4.45
2395 2900 1.224592 GTAGGCACCATGTCCAGGG 59.775 63.158 0.00 0.00 38.43 4.45
2400 2905 4.998839 ACCATGTCCAGGGTGAGA 57.001 55.556 2.31 0.00 44.76 3.27
2411 2916 2.418746 CCAGGGTGAGACAGAATAACGG 60.419 54.545 0.00 0.00 0.00 4.44
2425 2930 0.766131 TAACGGGCCTCTGTTTTCCA 59.234 50.000 0.84 0.00 42.12 3.53
2452 2957 5.986501 AAAAATGGGCGTATGTTTTCCTA 57.013 34.783 0.00 0.00 0.00 2.94
2478 2983 0.169009 GAACGAAATGCTGCAGGTCC 59.831 55.000 17.12 0.00 0.00 4.46
2481 2986 0.957395 CGAAATGCTGCAGGTCCACT 60.957 55.000 17.12 0.00 0.00 4.00
2482 2987 0.807496 GAAATGCTGCAGGTCCACTC 59.193 55.000 17.12 2.33 0.00 3.51
2484 2989 2.809861 AATGCTGCAGGTCCACTCCG 62.810 60.000 17.12 0.00 0.00 4.63
2485 2990 4.767255 GCTGCAGGTCCACTCCGG 62.767 72.222 17.12 0.00 0.00 5.14
2486 2991 2.997315 CTGCAGGTCCACTCCGGA 60.997 66.667 5.57 2.93 43.61 5.14
2493 2998 3.458163 TCCACTCCGGATGTCGCC 61.458 66.667 3.57 0.00 39.64 5.54
2494 2999 4.530857 CCACTCCGGATGTCGCCC 62.531 72.222 3.57 0.00 36.56 6.13
2495 3000 4.873129 CACTCCGGATGTCGCCCG 62.873 72.222 3.57 0.00 46.10 6.13
2518 3023 1.302033 CGCCTGGAGCTGTCTGTTT 60.302 57.895 0.00 0.00 40.39 2.83
2528 3033 1.601412 GCTGTCTGTTTGCTTTGCCTC 60.601 52.381 0.00 0.00 0.00 4.70
2575 3085 3.585574 CGTCGACGCGATGACACG 61.586 66.667 26.59 17.05 44.49 4.49
2657 3183 0.596577 GGAACGACCCTGCCTTTTTC 59.403 55.000 0.00 0.00 0.00 2.29
2686 3212 1.456287 GGTTGCACCCTGGAGAACT 59.544 57.895 0.00 0.00 30.04 3.01
2726 3259 5.005299 CGAGTTGGAAAAATGTTTTCACCAC 59.995 40.000 13.76 7.80 36.77 4.16
2730 3263 5.982356 TGGAAAAATGTTTTCACCACATGA 58.018 33.333 13.76 0.00 34.97 3.07
2742 3275 6.924913 TTCACCACATGAAAATTATCCCAA 57.075 33.333 0.00 0.00 44.59 4.12
2743 3276 6.279513 TCACCACATGAAAATTATCCCAAC 57.720 37.500 0.00 0.00 33.02 3.77
2744 3277 5.777223 TCACCACATGAAAATTATCCCAACA 59.223 36.000 0.00 0.00 33.02 3.33
2745 3278 5.868801 CACCACATGAAAATTATCCCAACAC 59.131 40.000 0.00 0.00 0.00 3.32
2746 3279 5.779771 ACCACATGAAAATTATCCCAACACT 59.220 36.000 0.00 0.00 0.00 3.55
2747 3280 6.101332 CCACATGAAAATTATCCCAACACTG 58.899 40.000 0.00 0.00 0.00 3.66
2748 3281 6.295236 CCACATGAAAATTATCCCAACACTGT 60.295 38.462 0.00 0.00 0.00 3.55
2749 3282 7.093988 CCACATGAAAATTATCCCAACACTGTA 60.094 37.037 0.00 0.00 0.00 2.74
2750 3283 8.469200 CACATGAAAATTATCCCAACACTGTAT 58.531 33.333 0.00 0.00 0.00 2.29
2751 3284 9.693739 ACATGAAAATTATCCCAACACTGTATA 57.306 29.630 0.00 0.00 0.00 1.47
2759 3292 9.747898 ATTATCCCAACACTGTATAAAAAGACA 57.252 29.630 0.00 0.00 0.00 3.41
2760 3293 7.687941 ATCCCAACACTGTATAAAAAGACAG 57.312 36.000 0.59 0.59 46.95 3.51
2781 3314 9.490379 AGACAGTTAGAAATTAACACTACTTGG 57.510 33.333 0.56 0.00 0.00 3.61
2782 3315 8.617290 ACAGTTAGAAATTAACACTACTTGGG 57.383 34.615 0.56 0.00 0.00 4.12
2783 3316 8.434392 ACAGTTAGAAATTAACACTACTTGGGA 58.566 33.333 0.56 0.00 0.00 4.37
2784 3317 9.449719 CAGTTAGAAATTAACACTACTTGGGAT 57.550 33.333 0.56 0.00 0.00 3.85
2793 3326 9.760077 ATTAACACTACTTGGGATAAATCTACG 57.240 33.333 0.00 0.00 0.00 3.51
2794 3327 5.598769 ACACTACTTGGGATAAATCTACGC 58.401 41.667 0.00 0.00 0.00 4.42
2795 3328 5.128171 ACACTACTTGGGATAAATCTACGCA 59.872 40.000 0.00 0.00 0.00 5.24
2796 3329 6.046593 CACTACTTGGGATAAATCTACGCAA 58.953 40.000 0.00 0.00 35.74 4.85
2797 3330 6.537301 CACTACTTGGGATAAATCTACGCAAA 59.463 38.462 0.00 0.00 36.40 3.68
2798 3331 7.226720 CACTACTTGGGATAAATCTACGCAAAT 59.773 37.037 0.00 0.00 36.40 2.32
2799 3332 6.377327 ACTTGGGATAAATCTACGCAAATG 57.623 37.500 0.00 0.00 36.40 2.32
2800 3333 6.119536 ACTTGGGATAAATCTACGCAAATGA 58.880 36.000 0.00 0.00 36.40 2.57
2801 3334 6.772716 ACTTGGGATAAATCTACGCAAATGAT 59.227 34.615 0.00 0.00 36.40 2.45
2802 3335 7.936847 ACTTGGGATAAATCTACGCAAATGATA 59.063 33.333 0.00 0.00 36.40 2.15
2803 3336 8.684386 TTGGGATAAATCTACGCAAATGATAA 57.316 30.769 0.00 0.00 34.55 1.75
2804 3337 8.322906 TGGGATAAATCTACGCAAATGATAAG 57.677 34.615 0.00 0.00 0.00 1.73
2805 3338 7.936847 TGGGATAAATCTACGCAAATGATAAGT 59.063 33.333 0.00 0.00 0.00 2.24
2806 3339 8.230486 GGGATAAATCTACGCAAATGATAAGTG 58.770 37.037 0.00 0.00 0.00 3.16
2807 3340 7.746475 GGATAAATCTACGCAAATGATAAGTGC 59.254 37.037 0.00 0.00 34.87 4.40
2808 3341 5.424121 AATCTACGCAAATGATAAGTGCC 57.576 39.130 0.00 0.00 34.73 5.01
2809 3342 3.867857 TCTACGCAAATGATAAGTGCCA 58.132 40.909 0.00 0.00 34.73 4.92
2810 3343 2.919666 ACGCAAATGATAAGTGCCAC 57.080 45.000 0.00 0.00 34.73 5.01
2811 3344 2.158559 ACGCAAATGATAAGTGCCACA 58.841 42.857 0.00 0.00 34.73 4.17
2812 3345 2.095263 ACGCAAATGATAAGTGCCACAC 60.095 45.455 0.00 0.00 34.73 3.82
2813 3346 2.518949 GCAAATGATAAGTGCCACACG 58.481 47.619 0.00 0.00 39.64 4.49
2814 3347 2.095263 GCAAATGATAAGTGCCACACGT 60.095 45.455 0.00 0.00 39.64 4.49
2815 3348 3.491356 CAAATGATAAGTGCCACACGTG 58.509 45.455 15.48 15.48 39.64 4.49
2816 3349 2.472695 ATGATAAGTGCCACACGTGT 57.527 45.000 17.22 17.22 39.64 4.49
2817 3350 1.507562 TGATAAGTGCCACACGTGTG 58.492 50.000 36.13 36.13 45.23 3.82
2826 3359 1.081906 CACACGTGTGGCATGAAGC 60.082 57.895 35.65 0.00 42.10 3.86
2836 3369 2.543578 GCATGAAGCACTTCGGTCA 58.456 52.632 0.00 0.00 44.79 4.02
2837 3370 1.089920 GCATGAAGCACTTCGGTCAT 58.910 50.000 0.00 0.00 44.79 3.06
2838 3371 1.202110 GCATGAAGCACTTCGGTCATG 60.202 52.381 0.00 7.89 44.79 3.07
2839 3372 2.349590 CATGAAGCACTTCGGTCATGA 58.650 47.619 6.65 0.00 42.28 3.07
2840 3373 2.768253 TGAAGCACTTCGGTCATGAT 57.232 45.000 0.00 0.00 42.28 2.45
2841 3374 3.885724 TGAAGCACTTCGGTCATGATA 57.114 42.857 0.00 0.00 42.28 2.15
2842 3375 4.406648 TGAAGCACTTCGGTCATGATAT 57.593 40.909 0.00 0.00 42.28 1.63
2843 3376 4.769688 TGAAGCACTTCGGTCATGATATT 58.230 39.130 0.00 0.00 42.28 1.28
2844 3377 5.185454 TGAAGCACTTCGGTCATGATATTT 58.815 37.500 0.00 0.00 42.28 1.40
2845 3378 5.647658 TGAAGCACTTCGGTCATGATATTTT 59.352 36.000 0.00 0.00 42.28 1.82
2846 3379 6.150976 TGAAGCACTTCGGTCATGATATTTTT 59.849 34.615 0.00 0.00 42.28 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 1.178276 GGAAGAAGAGTGCGAGGAGA 58.822 55.000 0.00 0.00 0.00 3.71
245 258 2.975799 GCTCCGTTTTCACCGGCA 60.976 61.111 0.00 0.00 45.09 5.69
335 349 1.912043 CCATCTTCAGGGAGTCCTTGT 59.088 52.381 19.91 0.00 42.67 3.16
660 689 5.466058 TCGGCTAAACACGTCTAAATTTCAA 59.534 36.000 0.00 0.00 0.00 2.69
745 774 2.909965 TTGGTTTCCAGCCACCGC 60.910 61.111 0.00 0.00 35.60 5.68
749 778 0.534203 GACGAGTTGGTTTCCAGCCA 60.534 55.000 0.00 0.00 35.27 4.75
757 786 1.070758 ACATGCTGAGACGAGTTGGTT 59.929 47.619 0.00 0.00 0.00 3.67
797 830 2.821546 CGCCTAAAATCATCGTCTGGA 58.178 47.619 0.00 0.00 0.00 3.86
805 838 3.281727 TTCAGAGGCGCCTAAAATCAT 57.718 42.857 32.97 4.00 0.00 2.45
806 839 2.779755 TTCAGAGGCGCCTAAAATCA 57.220 45.000 32.97 8.84 0.00 2.57
820 853 0.250295 CCAGCCGTTGGTCTTTCAGA 60.250 55.000 0.00 0.00 42.41 3.27
847 881 7.088272 GCAATACTTTGAACCGTTTTCCTTAT 58.912 34.615 0.00 0.00 34.60 1.73
854 888 5.195001 ACATGCAATACTTTGAACCGTTT 57.805 34.783 0.00 0.00 34.60 3.60
871 905 8.981647 AGATTGAAAACACTTGAAAATACATGC 58.018 29.630 0.00 0.00 0.00 4.06
876 910 9.959749 GGTACAGATTGAAAACACTTGAAAATA 57.040 29.630 0.00 0.00 0.00 1.40
893 927 7.050970 TCATTTATAGTGCTCGGTACAGATT 57.949 36.000 0.00 0.00 0.00 2.40
945 979 2.509336 CGATGTGGACTGGCCGAC 60.509 66.667 0.00 0.00 40.66 4.79
946 980 2.678580 TCGATGTGGACTGGCCGA 60.679 61.111 0.00 0.00 40.66 5.54
947 981 2.509336 GTCGATGTGGACTGGCCG 60.509 66.667 0.00 0.00 40.66 6.13
948 982 2.125106 GGTCGATGTGGACTGGCC 60.125 66.667 0.00 0.00 37.12 5.36
950 984 2.618053 GTTAAGGTCGATGTGGACTGG 58.382 52.381 0.00 0.00 37.12 4.00
952 986 2.496470 GAGGTTAAGGTCGATGTGGACT 59.504 50.000 0.00 0.00 37.12 3.85
953 987 2.418334 GGAGGTTAAGGTCGATGTGGAC 60.418 54.545 0.00 0.00 36.18 4.02
954 988 1.829222 GGAGGTTAAGGTCGATGTGGA 59.171 52.381 0.00 0.00 0.00 4.02
955 989 1.553248 TGGAGGTTAAGGTCGATGTGG 59.447 52.381 0.00 0.00 0.00 4.17
956 990 2.893637 CTGGAGGTTAAGGTCGATGTG 58.106 52.381 0.00 0.00 0.00 3.21
957 991 1.207329 GCTGGAGGTTAAGGTCGATGT 59.793 52.381 0.00 0.00 0.00 3.06
958 992 1.473434 GGCTGGAGGTTAAGGTCGATG 60.473 57.143 0.00 0.00 0.00 3.84
959 993 0.831307 GGCTGGAGGTTAAGGTCGAT 59.169 55.000 0.00 0.00 0.00 3.59
960 994 1.601419 CGGCTGGAGGTTAAGGTCGA 61.601 60.000 0.00 0.00 0.00 4.20
961 995 1.153628 CGGCTGGAGGTTAAGGTCG 60.154 63.158 0.00 0.00 0.00 4.79
962 996 1.449778 GCGGCTGGAGGTTAAGGTC 60.450 63.158 0.00 0.00 0.00 3.85
963 997 1.900545 GAGCGGCTGGAGGTTAAGGT 61.901 60.000 7.50 0.00 0.00 3.50
964 998 1.153349 GAGCGGCTGGAGGTTAAGG 60.153 63.158 7.50 0.00 0.00 2.69
965 999 1.153349 GGAGCGGCTGGAGGTTAAG 60.153 63.158 7.50 0.00 0.00 1.85
966 1000 1.198759 AAGGAGCGGCTGGAGGTTAA 61.199 55.000 7.50 0.00 0.00 2.01
967 1001 0.324923 TAAGGAGCGGCTGGAGGTTA 60.325 55.000 7.50 0.00 0.00 2.85
968 1002 1.612442 TAAGGAGCGGCTGGAGGTT 60.612 57.895 7.50 0.00 0.00 3.50
996 1030 2.028130 CTTGGAGATCGCCATTGGC 58.972 57.895 19.59 18.10 46.75 4.52
997 1031 0.465097 AGCTTGGAGATCGCCATTGG 60.465 55.000 19.59 12.97 37.86 3.16
1027 1061 0.946221 ACAGCCGTGAAAGCGAAGAG 60.946 55.000 0.00 0.00 34.64 2.85
1092 1126 2.387125 CTTGGTTCGCGGTTGTGGTG 62.387 60.000 6.13 0.00 0.00 4.17
1173 1207 4.247380 GGGATCTGAGGCAGCGGG 62.247 72.222 0.00 0.00 0.00 6.13
1218 1253 4.440829 GGCAATGGCGGGAAGGGA 62.441 66.667 0.00 0.00 42.47 4.20
1231 1266 3.727258 CCCGGGGATCTGTGGCAA 61.727 66.667 14.71 0.00 0.00 4.52
1542 1578 1.444553 GATCGGATCGATGGGCGTC 60.445 63.158 0.54 0.00 47.00 5.19
1544 1580 2.125912 GGATCGGATCGATGGGCG 60.126 66.667 0.54 0.00 47.00 6.13
1690 2028 2.350522 GGTTGAGCTGTCGAACATCAT 58.649 47.619 0.00 0.00 0.00 2.45
1733 2092 3.682792 CGGAGACACGGGAGAAGT 58.317 61.111 0.00 0.00 0.00 3.01
1760 2119 1.668151 GTGCTGACACGGGAGAACC 60.668 63.158 0.00 0.00 36.98 3.62
1791 2150 8.610248 TTCAGATTGTCGTGGTTAGAAATTAA 57.390 30.769 0.00 0.00 0.00 1.40
1792 2151 8.786826 ATTCAGATTGTCGTGGTTAGAAATTA 57.213 30.769 0.00 0.00 0.00 1.40
1794 2153 7.607991 AGAATTCAGATTGTCGTGGTTAGAAAT 59.392 33.333 8.44 0.00 0.00 2.17
1795 2154 6.934645 AGAATTCAGATTGTCGTGGTTAGAAA 59.065 34.615 8.44 0.00 0.00 2.52
1796 2155 6.368791 CAGAATTCAGATTGTCGTGGTTAGAA 59.631 38.462 8.44 0.00 0.00 2.10
1797 2156 5.869344 CAGAATTCAGATTGTCGTGGTTAGA 59.131 40.000 8.44 0.00 0.00 2.10
1798 2157 5.639506 ACAGAATTCAGATTGTCGTGGTTAG 59.360 40.000 8.44 0.00 0.00 2.34
1802 2161 3.125829 CCACAGAATTCAGATTGTCGTGG 59.874 47.826 8.44 6.99 34.61 4.94
1806 2165 7.570140 CGCATATACCACAGAATTCAGATTGTC 60.570 40.741 8.44 0.00 0.00 3.18
1807 2166 6.203530 CGCATATACCACAGAATTCAGATTGT 59.796 38.462 8.44 0.00 0.00 2.71
1810 2169 5.698089 CACGCATATACCACAGAATTCAGAT 59.302 40.000 8.44 0.00 0.00 2.90
1811 2170 5.049828 CACGCATATACCACAGAATTCAGA 58.950 41.667 8.44 0.00 0.00 3.27
1824 2183 5.646577 AGATTAGAGGGACACGCATATAC 57.353 43.478 0.00 0.00 0.00 1.47
1830 2189 2.554893 CTCCTAGATTAGAGGGACACGC 59.445 54.545 0.00 0.00 34.56 5.34
1831 2190 3.822940 ACTCCTAGATTAGAGGGACACG 58.177 50.000 0.00 0.00 34.56 4.49
1874 2237 3.632145 GGTGAAGCCTCTGAAAGACAAAA 59.368 43.478 0.00 0.00 38.67 2.44
1878 2241 2.550830 TGGTGAAGCCTCTGAAAGAC 57.449 50.000 0.00 0.00 37.36 3.01
1902 2266 9.551734 CATCATCTTCTTTCTTTTTCCCTTTTT 57.448 29.630 0.00 0.00 0.00 1.94
1903 2267 8.927411 TCATCATCTTCTTTCTTTTTCCCTTTT 58.073 29.630 0.00 0.00 0.00 2.27
1904 2268 8.482852 TCATCATCTTCTTTCTTTTTCCCTTT 57.517 30.769 0.00 0.00 0.00 3.11
1905 2269 8.482852 TTCATCATCTTCTTTCTTTTTCCCTT 57.517 30.769 0.00 0.00 0.00 3.95
1906 2270 8.529476 CATTCATCATCTTCTTTCTTTTTCCCT 58.471 33.333 0.00 0.00 0.00 4.20
1907 2271 7.763071 CCATTCATCATCTTCTTTCTTTTTCCC 59.237 37.037 0.00 0.00 0.00 3.97
1908 2272 7.763071 CCCATTCATCATCTTCTTTCTTTTTCC 59.237 37.037 0.00 0.00 0.00 3.13
1909 2273 8.309656 ACCCATTCATCATCTTCTTTCTTTTTC 58.690 33.333 0.00 0.00 0.00 2.29
1910 2274 8.198807 ACCCATTCATCATCTTCTTTCTTTTT 57.801 30.769 0.00 0.00 0.00 1.94
1916 2280 6.388100 TCTCCTACCCATTCATCATCTTCTTT 59.612 38.462 0.00 0.00 0.00 2.52
1929 2293 3.265995 ACGAAACCATTCTCCTACCCATT 59.734 43.478 0.00 0.00 33.17 3.16
1934 2298 4.817517 TCTTCACGAAACCATTCTCCTAC 58.182 43.478 0.00 0.00 33.17 3.18
1936 2300 3.325135 ACTCTTCACGAAACCATTCTCCT 59.675 43.478 0.00 0.00 33.17 3.69
1939 2303 8.095169 AGTAAATACTCTTCACGAAACCATTCT 58.905 33.333 0.00 0.00 33.17 2.40
1961 2325 9.169592 GGCCATGTAACTAAACATTAAGAGTAA 57.830 33.333 0.00 0.00 38.01 2.24
1962 2326 7.493320 CGGCCATGTAACTAAACATTAAGAGTA 59.507 37.037 2.24 0.00 38.01 2.59
1963 2327 6.315393 CGGCCATGTAACTAAACATTAAGAGT 59.685 38.462 2.24 0.00 38.01 3.24
1964 2328 6.715464 CGGCCATGTAACTAAACATTAAGAG 58.285 40.000 2.24 0.00 38.01 2.85
1965 2329 5.065474 GCGGCCATGTAACTAAACATTAAGA 59.935 40.000 2.24 0.00 38.01 2.10
1966 2330 5.065988 AGCGGCCATGTAACTAAACATTAAG 59.934 40.000 2.24 0.00 38.01 1.85
1969 2333 3.352648 AGCGGCCATGTAACTAAACATT 58.647 40.909 2.24 0.00 38.01 2.71
1980 2344 2.490509 GGTAAAACTAAAGCGGCCATGT 59.509 45.455 2.24 0.00 0.00 3.21
1984 2348 2.815503 TCTTGGTAAAACTAAAGCGGCC 59.184 45.455 0.00 0.00 0.00 6.13
2007 2371 8.278639 ACGATGAGATCTTATCCCTAGTATCAT 58.721 37.037 18.90 3.85 0.00 2.45
2009 2373 8.514330 AACGATGAGATCTTATCCCTAGTATC 57.486 38.462 18.90 0.00 0.00 2.24
2010 2374 8.887264 AAACGATGAGATCTTATCCCTAGTAT 57.113 34.615 18.90 3.39 0.00 2.12
2011 2375 7.119407 CGAAACGATGAGATCTTATCCCTAGTA 59.881 40.741 18.90 0.00 0.00 1.82
2013 2377 6.318628 CGAAACGATGAGATCTTATCCCTAG 58.681 44.000 18.90 9.44 0.00 3.02
2016 2380 4.022242 TCCGAAACGATGAGATCTTATCCC 60.022 45.833 18.90 7.51 0.00 3.85
2017 2381 5.122512 TCCGAAACGATGAGATCTTATCC 57.877 43.478 18.90 6.65 0.00 2.59
2018 2382 5.764131 ACTCCGAAACGATGAGATCTTATC 58.236 41.667 15.76 15.76 0.00 1.75
2020 2384 5.578005 AACTCCGAAACGATGAGATCTTA 57.422 39.130 0.00 0.00 0.00 2.10
2021 2385 4.457834 AACTCCGAAACGATGAGATCTT 57.542 40.909 0.00 0.00 0.00 2.40
2023 2387 6.642683 TTTAAACTCCGAAACGATGAGATC 57.357 37.500 0.00 0.00 0.00 2.75
2026 2390 6.411652 GCTATTTAAACTCCGAAACGATGAG 58.588 40.000 0.00 0.00 0.00 2.90
2027 2391 5.292589 GGCTATTTAAACTCCGAAACGATGA 59.707 40.000 0.00 0.00 0.00 2.92
2029 2393 5.064325 GTGGCTATTTAAACTCCGAAACGAT 59.936 40.000 0.00 0.00 0.00 3.73
2030 2394 4.389687 GTGGCTATTTAAACTCCGAAACGA 59.610 41.667 0.00 0.00 0.00 3.85
2031 2395 4.436451 GGTGGCTATTTAAACTCCGAAACG 60.436 45.833 0.00 0.00 0.00 3.60
2032 2396 4.436451 CGGTGGCTATTTAAACTCCGAAAC 60.436 45.833 10.02 0.00 39.17 2.78
2033 2397 3.685756 CGGTGGCTATTTAAACTCCGAAA 59.314 43.478 10.02 0.00 39.17 3.46
2034 2398 3.055963 TCGGTGGCTATTTAAACTCCGAA 60.056 43.478 13.92 3.01 41.96 4.30
2035 2399 2.496871 TCGGTGGCTATTTAAACTCCGA 59.503 45.455 12.84 12.84 42.52 4.55
2036 2400 2.864343 CTCGGTGGCTATTTAAACTCCG 59.136 50.000 9.52 9.52 38.36 4.63
2037 2401 4.120589 CTCTCGGTGGCTATTTAAACTCC 58.879 47.826 0.00 0.00 0.00 3.85
2045 2409 4.726583 TGACTATACTCTCGGTGGCTATT 58.273 43.478 0.00 0.00 0.00 1.73
2047 2411 3.851458 TGACTATACTCTCGGTGGCTA 57.149 47.619 0.00 0.00 0.00 3.93
2053 2417 7.260558 TCTTTACACATGACTATACTCTCGG 57.739 40.000 0.00 0.00 0.00 4.63
2054 2418 8.560374 TCATCTTTACACATGACTATACTCTCG 58.440 37.037 0.00 0.00 0.00 4.04
2102 2488 0.106335 TGTCCCGCGTAAACCAAAGA 59.894 50.000 4.92 0.00 0.00 2.52
2103 2489 0.945813 TTGTCCCGCGTAAACCAAAG 59.054 50.000 4.92 0.00 0.00 2.77
2104 2490 1.267261 CATTGTCCCGCGTAAACCAAA 59.733 47.619 4.92 0.00 0.00 3.28
2107 2493 1.135939 GCATTGTCCCGCGTAAACC 59.864 57.895 4.92 0.00 0.00 3.27
2108 2494 0.519961 AAGCATTGTCCCGCGTAAAC 59.480 50.000 4.92 0.00 0.00 2.01
2110 2496 1.355796 CGAAGCATTGTCCCGCGTAA 61.356 55.000 4.92 0.00 0.00 3.18
2111 2497 1.807981 CGAAGCATTGTCCCGCGTA 60.808 57.895 4.92 0.00 0.00 4.42
2112 2498 3.118454 CGAAGCATTGTCCCGCGT 61.118 61.111 4.92 0.00 0.00 6.01
2113 2499 3.864686 CCGAAGCATTGTCCCGCG 61.865 66.667 0.00 0.00 0.00 6.46
2114 2500 2.746277 ACCGAAGCATTGTCCCGC 60.746 61.111 0.00 0.00 0.00 6.13
2115 2501 3.039202 GCACCGAAGCATTGTCCCG 62.039 63.158 0.00 0.00 0.00 5.14
2116 2502 1.244019 AAGCACCGAAGCATTGTCCC 61.244 55.000 2.02 0.00 36.85 4.46
2117 2503 0.598065 AAAGCACCGAAGCATTGTCC 59.402 50.000 2.02 0.00 36.85 4.02
2118 2504 3.492313 CTTAAAGCACCGAAGCATTGTC 58.508 45.455 2.02 0.00 36.85 3.18
2119 2505 2.228822 CCTTAAAGCACCGAAGCATTGT 59.771 45.455 2.02 0.00 36.85 2.71
2120 2506 2.867429 CCTTAAAGCACCGAAGCATTG 58.133 47.619 2.02 0.00 36.85 2.82
2121 2507 1.202348 GCCTTAAAGCACCGAAGCATT 59.798 47.619 2.02 0.00 36.85 3.56
2122 2508 0.811281 GCCTTAAAGCACCGAAGCAT 59.189 50.000 2.02 0.00 36.85 3.79
2123 2509 0.536233 TGCCTTAAAGCACCGAAGCA 60.536 50.000 0.00 0.00 38.00 3.91
2124 2510 2.253513 TGCCTTAAAGCACCGAAGC 58.746 52.632 0.00 0.00 38.00 3.86
2132 2518 4.022849 ACACAAAGACAGATGCCTTAAAGC 60.023 41.667 0.00 0.00 0.00 3.51
2133 2519 5.471456 AGACACAAAGACAGATGCCTTAAAG 59.529 40.000 0.00 0.00 0.00 1.85
2134 2520 5.376625 AGACACAAAGACAGATGCCTTAAA 58.623 37.500 0.00 0.00 0.00 1.52
2135 2521 4.973168 AGACACAAAGACAGATGCCTTAA 58.027 39.130 0.00 0.00 0.00 1.85
2136 2522 4.623932 AGACACAAAGACAGATGCCTTA 57.376 40.909 0.00 0.00 0.00 2.69
2137 2523 3.498774 AGACACAAAGACAGATGCCTT 57.501 42.857 0.00 0.00 0.00 4.35
2138 2524 4.223700 TCATAGACACAAAGACAGATGCCT 59.776 41.667 0.00 0.00 0.00 4.75
2139 2525 4.331168 GTCATAGACACAAAGACAGATGCC 59.669 45.833 0.00 0.00 32.09 4.40
2140 2526 4.931601 TGTCATAGACACAAAGACAGATGC 59.068 41.667 0.00 0.00 37.67 3.91
2141 2527 6.592994 ACATGTCATAGACACAAAGACAGATG 59.407 38.462 1.43 0.00 45.65 2.90
2142 2528 6.592994 CACATGTCATAGACACAAAGACAGAT 59.407 38.462 0.00 0.00 45.65 2.90
2143 2529 5.928264 CACATGTCATAGACACAAAGACAGA 59.072 40.000 0.00 0.00 45.65 3.41
2144 2530 5.121298 CCACATGTCATAGACACAAAGACAG 59.879 44.000 0.00 0.00 45.65 3.51
2145 2531 4.996758 CCACATGTCATAGACACAAAGACA 59.003 41.667 0.00 0.00 45.65 3.41
2146 2532 5.120830 GTCCACATGTCATAGACACAAAGAC 59.879 44.000 0.00 4.64 45.65 3.01
2147 2533 5.237815 GTCCACATGTCATAGACACAAAGA 58.762 41.667 0.00 0.00 45.65 2.52
2148 2534 4.393062 GGTCCACATGTCATAGACACAAAG 59.607 45.833 13.73 0.00 45.65 2.77
2149 2535 4.323417 GGTCCACATGTCATAGACACAAA 58.677 43.478 13.73 0.00 45.65 2.83
2150 2536 3.307410 GGGTCCACATGTCATAGACACAA 60.307 47.826 13.73 0.00 45.65 3.33
2151 2537 2.236146 GGGTCCACATGTCATAGACACA 59.764 50.000 13.73 0.00 45.65 3.72
2152 2538 2.236146 TGGGTCCACATGTCATAGACAC 59.764 50.000 13.73 11.56 45.65 3.67
2153 2539 2.545810 TGGGTCCACATGTCATAGACA 58.454 47.619 13.73 1.95 46.90 3.41
2154 2540 3.270877 GTTGGGTCCACATGTCATAGAC 58.729 50.000 0.00 0.70 0.00 2.59
2155 2541 2.909662 TGTTGGGTCCACATGTCATAGA 59.090 45.455 0.00 0.00 0.00 1.98
2156 2542 3.273434 CTGTTGGGTCCACATGTCATAG 58.727 50.000 0.00 0.00 0.00 2.23
2157 2543 2.026356 CCTGTTGGGTCCACATGTCATA 60.026 50.000 0.00 0.00 0.00 2.15
2158 2544 1.272092 CCTGTTGGGTCCACATGTCAT 60.272 52.381 0.00 0.00 0.00 3.06
2159 2545 0.110295 CCTGTTGGGTCCACATGTCA 59.890 55.000 0.00 0.00 0.00 3.58
2160 2546 1.244019 GCCTGTTGGGTCCACATGTC 61.244 60.000 0.00 0.00 37.43 3.06
2161 2547 1.228552 GCCTGTTGGGTCCACATGT 60.229 57.895 0.00 0.00 37.43 3.21
2162 2548 2.334946 CGCCTGTTGGGTCCACATG 61.335 63.158 0.00 0.00 37.43 3.21
2163 2549 2.034066 CGCCTGTTGGGTCCACAT 59.966 61.111 0.00 0.00 37.43 3.21
2164 2550 4.263572 CCGCCTGTTGGGTCCACA 62.264 66.667 0.00 0.00 37.43 4.17
2172 2558 4.641645 TGGACCAGCCGCCTGTTG 62.642 66.667 0.00 0.00 40.66 3.33
2173 2559 4.643387 GTGGACCAGCCGCCTGTT 62.643 66.667 0.00 0.00 41.49 3.16
2175 2561 4.415150 ATGTGGACCAGCCGCCTG 62.415 66.667 0.00 0.00 46.97 4.85
2176 2562 4.415150 CATGTGGACCAGCCGCCT 62.415 66.667 0.00 0.00 46.97 5.52
2177 2563 4.722700 ACATGTGGACCAGCCGCC 62.723 66.667 0.00 0.00 46.97 6.13
2179 2565 2.436646 GGACATGTGGACCAGCCG 60.437 66.667 1.15 0.00 40.66 5.52
2180 2566 2.436646 CGGACATGTGGACCAGCC 60.437 66.667 1.15 0.00 37.10 4.85
2181 2567 0.889186 AAACGGACATGTGGACCAGC 60.889 55.000 1.15 0.00 0.00 4.85
2182 2568 0.874390 CAAACGGACATGTGGACCAG 59.126 55.000 1.15 0.00 0.00 4.00
2183 2569 0.181587 ACAAACGGACATGTGGACCA 59.818 50.000 1.15 0.00 0.00 4.02
2184 2570 0.591170 CACAAACGGACATGTGGACC 59.409 55.000 1.15 0.00 42.46 4.46
2189 2575 1.879380 CCATCACACAAACGGACATGT 59.121 47.619 0.00 0.00 0.00 3.21
2190 2576 1.401409 GCCATCACACAAACGGACATG 60.401 52.381 0.00 0.00 0.00 3.21
2191 2577 0.881118 GCCATCACACAAACGGACAT 59.119 50.000 0.00 0.00 0.00 3.06
2192 2578 1.502990 CGCCATCACACAAACGGACA 61.503 55.000 0.00 0.00 0.00 4.02
2193 2579 1.206578 CGCCATCACACAAACGGAC 59.793 57.895 0.00 0.00 0.00 4.79
2194 2580 0.948623 CTCGCCATCACACAAACGGA 60.949 55.000 0.00 0.00 0.00 4.69
2195 2581 0.948623 TCTCGCCATCACACAAACGG 60.949 55.000 0.00 0.00 0.00 4.44
2196 2582 0.865111 TTCTCGCCATCACACAAACG 59.135 50.000 0.00 0.00 0.00 3.60
2197 2583 2.855180 CATTCTCGCCATCACACAAAC 58.145 47.619 0.00 0.00 0.00 2.93
2198 2584 1.199789 GCATTCTCGCCATCACACAAA 59.800 47.619 0.00 0.00 0.00 2.83
2199 2585 0.804364 GCATTCTCGCCATCACACAA 59.196 50.000 0.00 0.00 0.00 3.33
2200 2586 2.470156 GCATTCTCGCCATCACACA 58.530 52.632 0.00 0.00 0.00 3.72
2230 2616 2.054140 TTGTTCAACCGCTGCCGAAC 62.054 55.000 10.27 10.27 38.55 3.95
2231 2617 1.820056 TTGTTCAACCGCTGCCGAA 60.820 52.632 0.00 0.00 36.29 4.30
2232 2618 2.203084 TTGTTCAACCGCTGCCGA 60.203 55.556 0.00 0.00 36.29 5.54
2233 2619 2.051345 GTTGTTCAACCGCTGCCG 60.051 61.111 4.54 0.00 0.00 5.69
2234 2620 0.031994 AATGTTGTTCAACCGCTGCC 59.968 50.000 12.23 0.00 0.00 4.85
2236 2622 2.223456 TGTGAATGTTGTTCAACCGCTG 60.223 45.455 12.23 0.00 0.00 5.18
2238 2624 2.483583 TGTGAATGTTGTTCAACCGC 57.516 45.000 12.23 5.46 0.00 5.68
2239 2625 3.225548 CGATGTGAATGTTGTTCAACCG 58.774 45.455 12.23 3.56 0.00 4.44
2240 2626 4.219033 GACGATGTGAATGTTGTTCAACC 58.781 43.478 12.23 0.00 0.00 3.77
2243 2748 4.376146 TCTGACGATGTGAATGTTGTTCA 58.624 39.130 0.00 0.00 0.00 3.18
2251 2756 3.368843 CCAAGGTCTCTGACGATGTGAAT 60.369 47.826 0.00 0.00 32.65 2.57
2260 2765 0.250467 TTGCAGCCAAGGTCTCTGAC 60.250 55.000 0.00 0.00 0.00 3.51
2276 2781 1.087501 GCTGTGGTTAGCTAGGTTGC 58.912 55.000 0.00 0.00 40.52 4.17
2286 2791 0.036590 TGCATGCTCAGCTGTGGTTA 59.963 50.000 20.33 2.88 0.00 2.85
2287 2792 0.611062 ATGCATGCTCAGCTGTGGTT 60.611 50.000 20.33 0.00 0.00 3.67
2288 2793 1.001269 ATGCATGCTCAGCTGTGGT 60.001 52.632 20.33 0.00 0.00 4.16
2301 2806 3.688694 AAAACTTGGACATGCATGCAT 57.311 38.095 27.46 27.46 37.08 3.96
2302 2807 3.472283 AAAAACTTGGACATGCATGCA 57.528 38.095 26.53 25.04 0.00 3.96
2319 2824 4.597404 TGCATGCTATCACCAACAAAAA 57.403 36.364 20.33 0.00 0.00 1.94
2320 2825 4.021280 ACATGCATGCTATCACCAACAAAA 60.021 37.500 26.53 0.00 0.00 2.44
2321 2826 3.510753 ACATGCATGCTATCACCAACAAA 59.489 39.130 26.53 0.00 0.00 2.83
2322 2827 3.090790 ACATGCATGCTATCACCAACAA 58.909 40.909 26.53 0.00 0.00 2.83
2323 2828 2.684374 GACATGCATGCTATCACCAACA 59.316 45.455 26.53 0.00 0.00 3.33
2324 2829 2.033801 GGACATGCATGCTATCACCAAC 59.966 50.000 26.53 0.48 0.00 3.77
2325 2830 2.300433 GGACATGCATGCTATCACCAA 58.700 47.619 26.53 0.00 0.00 3.67
2326 2831 1.212441 TGGACATGCATGCTATCACCA 59.788 47.619 26.53 20.31 0.00 4.17
2327 2832 1.971481 TGGACATGCATGCTATCACC 58.029 50.000 26.53 18.28 0.00 4.02
2328 2833 2.947652 ACTTGGACATGCATGCTATCAC 59.052 45.455 26.53 10.65 0.00 3.06
2329 2834 3.286329 ACTTGGACATGCATGCTATCA 57.714 42.857 26.53 15.65 0.00 2.15
2330 2835 3.379372 ACAACTTGGACATGCATGCTATC 59.621 43.478 26.53 16.07 0.00 2.08
2331 2836 3.129813 CACAACTTGGACATGCATGCTAT 59.870 43.478 26.53 7.36 0.00 2.97
2332 2837 2.488937 CACAACTTGGACATGCATGCTA 59.511 45.455 26.53 14.05 0.00 3.49
2333 2838 1.271379 CACAACTTGGACATGCATGCT 59.729 47.619 26.53 13.62 0.00 3.79
2334 2839 1.000060 ACACAACTTGGACATGCATGC 60.000 47.619 26.53 18.01 0.00 4.06
2335 2840 3.374220 AACACAACTTGGACATGCATG 57.626 42.857 25.09 25.09 0.00 4.06
2336 2841 4.405116 AAAACACAACTTGGACATGCAT 57.595 36.364 0.00 0.00 0.00 3.96
2337 2842 3.883830 AAAACACAACTTGGACATGCA 57.116 38.095 0.00 0.00 0.00 3.96
2338 2843 4.744631 CCTAAAAACACAACTTGGACATGC 59.255 41.667 0.00 0.00 0.00 4.06
2339 2844 4.744631 GCCTAAAAACACAACTTGGACATG 59.255 41.667 0.00 0.00 0.00 3.21
2340 2845 4.404073 TGCCTAAAAACACAACTTGGACAT 59.596 37.500 0.00 0.00 0.00 3.06
2341 2846 3.764434 TGCCTAAAAACACAACTTGGACA 59.236 39.130 0.00 0.00 0.00 4.02
2342 2847 4.379339 TGCCTAAAAACACAACTTGGAC 57.621 40.909 0.00 0.00 0.00 4.02
2343 2848 5.407407 TTTGCCTAAAAACACAACTTGGA 57.593 34.783 0.00 0.00 0.00 3.53
2344 2849 5.503846 GCATTTGCCTAAAAACACAACTTGG 60.504 40.000 0.00 0.00 34.31 3.61
2345 2850 5.064452 TGCATTTGCCTAAAAACACAACTTG 59.936 36.000 0.00 0.00 41.18 3.16
2346 2851 5.181748 TGCATTTGCCTAAAAACACAACTT 58.818 33.333 0.00 0.00 41.18 2.66
2347 2852 4.764172 TGCATTTGCCTAAAAACACAACT 58.236 34.783 0.00 0.00 41.18 3.16
2348 2853 5.007528 ACATGCATTTGCCTAAAAACACAAC 59.992 36.000 0.00 0.00 41.18 3.32
2349 2854 5.121811 ACATGCATTTGCCTAAAAACACAA 58.878 33.333 0.00 0.00 41.18 3.33
2350 2855 4.701765 ACATGCATTTGCCTAAAAACACA 58.298 34.783 0.00 0.00 41.18 3.72
2351 2856 4.152223 GGACATGCATTTGCCTAAAAACAC 59.848 41.667 0.00 0.00 41.18 3.32
2352 2857 4.202295 TGGACATGCATTTGCCTAAAAACA 60.202 37.500 0.00 0.00 41.18 2.83
2353 2858 4.314121 TGGACATGCATTTGCCTAAAAAC 58.686 39.130 0.00 0.00 41.18 2.43
2354 2859 4.613925 TGGACATGCATTTGCCTAAAAA 57.386 36.364 0.00 0.00 41.18 1.94
2355 2860 4.020396 ACATGGACATGCATTTGCCTAAAA 60.020 37.500 11.96 0.00 42.39 1.52
2356 2861 3.514706 ACATGGACATGCATTTGCCTAAA 59.485 39.130 11.96 0.00 42.39 1.85
2357 2862 3.098377 ACATGGACATGCATTTGCCTAA 58.902 40.909 11.96 0.00 42.39 2.69
2358 2863 2.737544 ACATGGACATGCATTTGCCTA 58.262 42.857 11.96 0.00 42.39 3.93
2359 2864 1.563924 ACATGGACATGCATTTGCCT 58.436 45.000 11.96 0.00 42.39 4.75
2360 2865 2.223876 CCTACATGGACATGCATTTGCC 60.224 50.000 11.96 0.00 42.39 4.52
2361 2866 2.800629 GCCTACATGGACATGCATTTGC 60.801 50.000 11.96 0.00 42.39 3.68
2362 2867 2.427812 TGCCTACATGGACATGCATTTG 59.572 45.455 11.96 0.00 42.39 2.32
2363 2868 2.428171 GTGCCTACATGGACATGCATTT 59.572 45.455 11.96 0.00 42.39 2.32
2364 2869 2.026641 GTGCCTACATGGACATGCATT 58.973 47.619 11.96 0.00 42.39 3.56
2365 2870 1.683943 GTGCCTACATGGACATGCAT 58.316 50.000 11.96 0.00 42.39 3.96
2366 2871 0.394216 GGTGCCTACATGGACATGCA 60.394 55.000 11.96 1.89 42.39 3.96
2367 2872 0.394216 TGGTGCCTACATGGACATGC 60.394 55.000 11.96 0.00 42.39 4.06
2368 2873 1.951602 CATGGTGCCTACATGGACATG 59.048 52.381 10.57 10.57 41.46 3.21
2369 2874 2.353357 CATGGTGCCTACATGGACAT 57.647 50.000 0.00 0.00 41.46 3.06
2370 2875 3.880040 CATGGTGCCTACATGGACA 57.120 52.632 0.00 0.00 41.46 4.02
2375 2880 0.548031 CCTGGACATGGTGCCTACAT 59.452 55.000 0.00 0.00 0.00 2.29
2376 2881 1.561769 CCCTGGACATGGTGCCTACA 61.562 60.000 0.00 0.00 0.00 2.74
2377 2882 1.224592 CCCTGGACATGGTGCCTAC 59.775 63.158 0.00 0.00 0.00 3.18
2378 2883 1.229820 ACCCTGGACATGGTGCCTA 60.230 57.895 0.00 0.00 32.36 3.93
2379 2884 2.532715 ACCCTGGACATGGTGCCT 60.533 61.111 0.00 0.00 32.36 4.75
2380 2885 2.361610 CACCCTGGACATGGTGCC 60.362 66.667 12.68 0.00 44.98 5.01
2383 2888 0.473694 TGTCTCACCCTGGACATGGT 60.474 55.000 0.00 0.00 37.52 3.55
2384 2889 0.251354 CTGTCTCACCCTGGACATGG 59.749 60.000 0.00 0.00 40.90 3.66
2385 2890 1.269958 TCTGTCTCACCCTGGACATG 58.730 55.000 0.00 0.00 40.90 3.21
2386 2891 2.030027 TTCTGTCTCACCCTGGACAT 57.970 50.000 0.00 0.00 40.90 3.06
2387 2892 2.030027 ATTCTGTCTCACCCTGGACA 57.970 50.000 0.00 0.00 39.71 4.02
2388 2893 3.676324 CGTTATTCTGTCTCACCCTGGAC 60.676 52.174 0.00 0.00 0.00 4.02
2389 2894 2.496070 CGTTATTCTGTCTCACCCTGGA 59.504 50.000 0.00 0.00 0.00 3.86
2390 2895 2.418746 CCGTTATTCTGTCTCACCCTGG 60.419 54.545 0.00 0.00 0.00 4.45
2391 2896 2.418746 CCCGTTATTCTGTCTCACCCTG 60.419 54.545 0.00 0.00 0.00 4.45
2392 2897 1.831736 CCCGTTATTCTGTCTCACCCT 59.168 52.381 0.00 0.00 0.00 4.34
2393 2898 1.742750 GCCCGTTATTCTGTCTCACCC 60.743 57.143 0.00 0.00 0.00 4.61
2394 2899 1.653151 GCCCGTTATTCTGTCTCACC 58.347 55.000 0.00 0.00 0.00 4.02
2395 2900 1.207329 AGGCCCGTTATTCTGTCTCAC 59.793 52.381 0.00 0.00 0.00 3.51
2396 2901 1.480954 GAGGCCCGTTATTCTGTCTCA 59.519 52.381 0.00 0.00 0.00 3.27
2397 2902 1.757699 AGAGGCCCGTTATTCTGTCTC 59.242 52.381 0.00 0.00 0.00 3.36
2398 2903 1.482593 CAGAGGCCCGTTATTCTGTCT 59.517 52.381 0.00 0.00 33.95 3.41
2399 2904 1.207329 ACAGAGGCCCGTTATTCTGTC 59.793 52.381 15.38 0.00 45.11 3.51
2400 2905 1.276622 ACAGAGGCCCGTTATTCTGT 58.723 50.000 15.38 15.38 43.89 3.41
2440 2945 3.255969 TCGTGGGCTAGGAAAACATAC 57.744 47.619 0.00 0.00 0.00 2.39
2442 2947 2.433436 GTTCGTGGGCTAGGAAAACAT 58.567 47.619 7.58 0.00 35.19 2.71
2452 2957 1.302511 AGCATTTCGTTCGTGGGCT 60.303 52.632 0.00 0.00 0.00 5.19
2478 2983 4.873129 CGGGCGACATCCGGAGTG 62.873 72.222 11.34 11.15 43.45 3.51
2503 3008 1.602311 AAGCAAACAGACAGCTCCAG 58.398 50.000 0.00 0.00 37.70 3.86
2504 3009 1.677576 CAAAGCAAACAGACAGCTCCA 59.322 47.619 0.00 0.00 37.70 3.86
2506 3011 1.601412 GGCAAAGCAAACAGACAGCTC 60.601 52.381 0.00 0.00 37.70 4.09
2534 3039 4.021544 TGGAAAAAGCAAACAGACAGTTGT 60.022 37.500 0.00 0.00 41.19 3.32
2535 3040 4.327087 GTGGAAAAAGCAAACAGACAGTTG 59.673 41.667 0.00 0.00 41.19 3.16
2538 3043 3.108144 CGTGGAAAAAGCAAACAGACAG 58.892 45.455 0.00 0.00 0.00 3.51
2539 3044 2.490115 ACGTGGAAAAAGCAAACAGACA 59.510 40.909 0.00 0.00 0.00 3.41
2546 3056 0.302288 CGTCGACGTGGAAAAAGCAA 59.698 50.000 29.08 0.00 34.11 3.91
2605 3115 1.153628 GGAATCCTCCCACGTGTCG 60.154 63.158 15.65 4.04 35.42 4.35
2606 3116 4.934989 GGAATCCTCCCACGTGTC 57.065 61.111 15.65 3.04 35.42 3.67
2680 3206 2.300437 ACACAACTAGGAGGCAGTTCTC 59.700 50.000 0.00 0.00 33.99 2.87
2686 3212 0.888619 CTCGACACAACTAGGAGGCA 59.111 55.000 0.00 0.00 0.00 4.75
2735 3268 8.786826 CTGTCTTTTTATACAGTGTTGGGATA 57.213 34.615 0.00 0.00 38.62 2.59
2736 3269 7.687941 CTGTCTTTTTATACAGTGTTGGGAT 57.312 36.000 0.00 0.00 38.62 3.85
2755 3288 9.490379 CCAAGTAGTGTTAATTTCTAACTGTCT 57.510 33.333 0.00 0.00 0.00 3.41
2756 3289 8.718734 CCCAAGTAGTGTTAATTTCTAACTGTC 58.281 37.037 0.00 0.00 0.00 3.51
2757 3290 8.434392 TCCCAAGTAGTGTTAATTTCTAACTGT 58.566 33.333 0.00 0.00 0.00 3.55
2758 3291 8.842358 TCCCAAGTAGTGTTAATTTCTAACTG 57.158 34.615 0.00 0.00 0.00 3.16
2767 3300 9.760077 CGTAGATTTATCCCAAGTAGTGTTAAT 57.240 33.333 0.00 0.00 0.00 1.40
2768 3301 7.707893 GCGTAGATTTATCCCAAGTAGTGTTAA 59.292 37.037 0.00 0.00 0.00 2.01
2769 3302 7.147863 TGCGTAGATTTATCCCAAGTAGTGTTA 60.148 37.037 0.00 0.00 0.00 2.41
2770 3303 6.047231 GCGTAGATTTATCCCAAGTAGTGTT 58.953 40.000 0.00 0.00 0.00 3.32
2771 3304 5.128171 TGCGTAGATTTATCCCAAGTAGTGT 59.872 40.000 0.00 0.00 0.00 3.55
2772 3305 5.597806 TGCGTAGATTTATCCCAAGTAGTG 58.402 41.667 0.00 0.00 0.00 2.74
2773 3306 5.864418 TGCGTAGATTTATCCCAAGTAGT 57.136 39.130 0.00 0.00 0.00 2.73
2774 3307 7.441157 TCATTTGCGTAGATTTATCCCAAGTAG 59.559 37.037 0.00 0.00 0.00 2.57
2775 3308 7.276658 TCATTTGCGTAGATTTATCCCAAGTA 58.723 34.615 0.00 0.00 0.00 2.24
2776 3309 6.119536 TCATTTGCGTAGATTTATCCCAAGT 58.880 36.000 0.00 0.00 0.00 3.16
2777 3310 6.618287 TCATTTGCGTAGATTTATCCCAAG 57.382 37.500 0.00 0.00 0.00 3.61
2778 3311 8.684386 TTATCATTTGCGTAGATTTATCCCAA 57.316 30.769 0.00 0.00 0.00 4.12
2779 3312 7.936847 ACTTATCATTTGCGTAGATTTATCCCA 59.063 33.333 0.00 0.00 0.00 4.37
2780 3313 8.230486 CACTTATCATTTGCGTAGATTTATCCC 58.770 37.037 0.00 0.00 0.00 3.85
2781 3314 7.746475 GCACTTATCATTTGCGTAGATTTATCC 59.254 37.037 0.00 0.00 0.00 2.59
2782 3315 7.746475 GGCACTTATCATTTGCGTAGATTTATC 59.254 37.037 0.00 0.00 37.11 1.75
2783 3316 7.228507 TGGCACTTATCATTTGCGTAGATTTAT 59.771 33.333 0.00 0.00 37.11 1.40
2784 3317 6.540551 TGGCACTTATCATTTGCGTAGATTTA 59.459 34.615 0.00 0.00 37.11 1.40
2785 3318 5.356751 TGGCACTTATCATTTGCGTAGATTT 59.643 36.000 0.00 0.00 37.11 2.17
2786 3319 4.881273 TGGCACTTATCATTTGCGTAGATT 59.119 37.500 0.00 0.00 37.11 2.40
2787 3320 4.273480 GTGGCACTTATCATTTGCGTAGAT 59.727 41.667 11.13 0.00 37.11 1.98
2788 3321 3.621268 GTGGCACTTATCATTTGCGTAGA 59.379 43.478 11.13 0.00 37.11 2.59
2789 3322 3.373748 TGTGGCACTTATCATTTGCGTAG 59.626 43.478 19.83 0.00 37.11 3.51
2790 3323 3.126171 GTGTGGCACTTATCATTTGCGTA 59.874 43.478 19.83 0.00 37.11 4.42
2791 3324 2.095263 GTGTGGCACTTATCATTTGCGT 60.095 45.455 19.83 0.00 37.11 5.24
2792 3325 2.518949 GTGTGGCACTTATCATTTGCG 58.481 47.619 19.83 0.00 37.11 4.85
2793 3326 2.095263 ACGTGTGGCACTTATCATTTGC 60.095 45.455 19.83 0.00 35.40 3.68
2794 3327 3.058293 ACACGTGTGGCACTTATCATTTG 60.058 43.478 22.71 7.02 34.19 2.32
2795 3328 3.058293 CACACGTGTGGCACTTATCATTT 60.058 43.478 35.65 0.00 42.10 2.32
2796 3329 2.483877 CACACGTGTGGCACTTATCATT 59.516 45.455 35.65 0.00 42.10 2.57
2797 3330 2.076100 CACACGTGTGGCACTTATCAT 58.924 47.619 35.65 0.33 42.10 2.45
2798 3331 1.507562 CACACGTGTGGCACTTATCA 58.492 50.000 35.65 0.00 42.10 2.15
2808 3341 1.081906 GCTTCATGCCACACGTGTG 60.082 57.895 36.13 36.13 45.23 3.82
2809 3342 1.525765 TGCTTCATGCCACACGTGT 60.526 52.632 17.22 17.22 42.00 4.49
2810 3343 1.081906 GTGCTTCATGCCACACGTG 60.082 57.895 15.48 15.48 42.00 4.49
2811 3344 0.819259 AAGTGCTTCATGCCACACGT 60.819 50.000 11.68 4.70 42.00 4.49
2812 3345 0.110056 GAAGTGCTTCATGCCACACG 60.110 55.000 7.03 0.00 42.00 4.49
2813 3346 0.110056 CGAAGTGCTTCATGCCACAC 60.110 55.000 11.82 8.21 42.00 3.82
2814 3347 1.236616 CCGAAGTGCTTCATGCCACA 61.237 55.000 11.82 0.00 42.00 4.17
2815 3348 1.237285 ACCGAAGTGCTTCATGCCAC 61.237 55.000 11.82 0.00 42.00 5.01
2816 3349 0.955428 GACCGAAGTGCTTCATGCCA 60.955 55.000 11.82 0.00 42.00 4.92
2817 3350 0.955428 TGACCGAAGTGCTTCATGCC 60.955 55.000 11.82 0.00 42.00 4.40
2818 3351 1.089920 ATGACCGAAGTGCTTCATGC 58.910 50.000 11.82 1.61 39.46 4.06
2819 3352 2.349590 TCATGACCGAAGTGCTTCATG 58.650 47.619 11.82 8.48 44.49 3.07
2820 3353 2.768253 TCATGACCGAAGTGCTTCAT 57.232 45.000 11.82 0.00 39.46 2.57
2821 3354 2.768253 ATCATGACCGAAGTGCTTCA 57.232 45.000 11.82 0.00 39.46 3.02
2822 3355 5.741388 AAATATCATGACCGAAGTGCTTC 57.259 39.130 0.00 2.04 36.29 3.86
2823 3356 6.515272 AAAAATATCATGACCGAAGTGCTT 57.485 33.333 0.00 0.00 0.00 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.