Multiple sequence alignment - TraesCS5A01G321700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G321700 chr5A 100.000 2730 0 0 1 2730 534457180 534459909 0.000000e+00 5042
1 TraesCS5A01G321700 chr5A 85.377 212 18 6 1992 2190 534367163 534367374 9.910000e-50 207
2 TraesCS5A01G321700 chr5A 87.755 98 12 0 2214 2311 534367367 534367464 6.180000e-22 115
3 TraesCS5A01G321700 chr5B 91.300 2092 114 37 51 2113 507162256 507164308 0.000000e+00 2793
4 TraesCS5A01G321700 chr5B 92.934 467 17 6 2268 2724 507164329 507164789 0.000000e+00 665
5 TraesCS5A01G321700 chr5D 92.631 1642 77 18 743 2383 421167301 421165703 0.000000e+00 2322
6 TraesCS5A01G321700 chr5D 86.152 751 66 14 18 740 421168211 421167471 0.000000e+00 776


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G321700 chr5A 534457180 534459909 2729 False 5042 5042 100.0000 1 2730 1 chr5A.!!$F1 2729
1 TraesCS5A01G321700 chr5B 507162256 507164789 2533 False 1729 2793 92.1170 51 2724 2 chr5B.!!$F1 2673
2 TraesCS5A01G321700 chr5D 421165703 421168211 2508 True 1549 2322 89.3915 18 2383 2 chr5D.!!$R1 2365

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
173 174 0.531200 GGTTGTGCTACTCGGCTACT 59.469 55.0 0.0 0.0 0.0 2.57 F
483 494 0.687757 AGGAGTTCATGCGGGCTCTA 60.688 55.0 0.0 0.0 0.0 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1717 1919 0.745845 AGCTCAATCACACCATCCGC 60.746 55.0 0.00 0.0 0.0 5.54 R
2252 2454 0.040425 AGACCGCGACAAAACATTGC 60.040 50.0 8.23 0.0 0.0 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 3.818961 ACAATGTGTGCGATCAAGAAG 57.181 42.857 0.00 0.00 0.00 2.85
39 40 3.814842 ACAATGTGTGCGATCAAGAAGAA 59.185 39.130 0.00 0.00 0.00 2.52
41 42 5.214417 CAATGTGTGCGATCAAGAAGAAAA 58.786 37.500 0.00 0.00 0.00 2.29
110 111 4.162690 GTCCCGCTCGAGCCCATT 62.163 66.667 30.66 0.00 37.91 3.16
117 118 0.872021 GCTCGAGCCCATTCGTACTG 60.872 60.000 27.22 0.00 41.22 2.74
122 123 0.981183 AGCCCATTCGTACTGTTCCA 59.019 50.000 0.00 0.00 0.00 3.53
130 131 1.802960 TCGTACTGTTCCAGAGTCGAC 59.197 52.381 7.70 7.70 35.18 4.20
167 168 1.941476 GCGTTCGGTTGTGCTACTCG 61.941 60.000 0.00 0.00 0.00 4.18
168 169 1.342082 CGTTCGGTTGTGCTACTCGG 61.342 60.000 0.00 0.00 0.00 4.63
169 170 1.373748 TTCGGTTGTGCTACTCGGC 60.374 57.895 0.00 0.00 0.00 5.54
170 171 1.812686 TTCGGTTGTGCTACTCGGCT 61.813 55.000 0.00 0.00 0.00 5.52
171 172 0.961857 TCGGTTGTGCTACTCGGCTA 60.962 55.000 0.00 0.00 0.00 3.93
173 174 0.531200 GGTTGTGCTACTCGGCTACT 59.469 55.000 0.00 0.00 0.00 2.57
174 175 1.469423 GGTTGTGCTACTCGGCTACTC 60.469 57.143 0.00 0.00 0.00 2.59
175 176 0.815734 TTGTGCTACTCGGCTACTCC 59.184 55.000 0.00 0.00 0.00 3.85
176 177 1.035932 TGTGCTACTCGGCTACTCCC 61.036 60.000 0.00 0.00 0.00 4.30
186 187 2.203308 CTACTCCCGAGCCGCCTA 60.203 66.667 0.00 0.00 0.00 3.93
259 260 2.262266 AGGAGAAGAAAGGAGAGGGG 57.738 55.000 0.00 0.00 0.00 4.79
311 319 1.216990 GAGATGTTGGGGGAGATGGT 58.783 55.000 0.00 0.00 0.00 3.55
379 387 2.203422 CCGGCAACAACCCAAGGA 60.203 61.111 0.00 0.00 0.00 3.36
410 418 1.021920 GGGAAGAAGAAGGCGCTGAC 61.022 60.000 7.64 0.00 0.00 3.51
434 442 2.266055 CCGCGAGAAGAAGCCCTT 59.734 61.111 8.23 0.00 37.93 3.95
442 450 1.909986 AGAAGAAGCCCTTGTCCTACC 59.090 52.381 0.00 0.00 34.68 3.18
446 454 0.838987 AAGCCCTTGTCCTACCGGAA 60.839 55.000 9.46 0.00 42.08 4.30
483 494 0.687757 AGGAGTTCATGCGGGCTCTA 60.688 55.000 0.00 0.00 0.00 2.43
614 625 4.149046 GTGAGTGTCAGTCGAATCTGTTTC 59.851 45.833 3.23 0.00 36.85 2.78
616 627 3.069586 AGTGTCAGTCGAATCTGTTTCCA 59.930 43.478 3.27 0.00 36.85 3.53
619 630 4.021104 TGTCAGTCGAATCTGTTTCCATCT 60.021 41.667 3.27 0.00 36.85 2.90
649 674 4.260907 CGAATCAAATGATGAACCGATGCT 60.261 41.667 0.00 0.00 42.54 3.79
653 678 0.839277 ATGATGAACCGATGCTGGGA 59.161 50.000 0.00 0.00 0.00 4.37
671 696 4.662278 TGGGAAGTAAAGTGAAGGGATTG 58.338 43.478 0.00 0.00 0.00 2.67
737 771 9.179909 TGATGAGTAGTTTTGTTTTCCTACAAA 57.820 29.630 0.00 0.00 44.01 2.83
774 975 3.118738 AGACCTCTTTGCATAACGTAGGG 60.119 47.826 0.00 0.00 0.00 3.53
781 982 6.597562 TCTTTGCATAACGTAGGGGAATTAT 58.402 36.000 0.00 0.00 0.00 1.28
782 983 7.057894 TCTTTGCATAACGTAGGGGAATTATT 58.942 34.615 0.00 0.00 0.00 1.40
783 984 8.212312 TCTTTGCATAACGTAGGGGAATTATTA 58.788 33.333 0.00 0.00 0.00 0.98
793 994 3.273618 AGGGGAATTATTAGCCAACCCAA 59.726 43.478 0.00 0.00 39.38 4.12
802 1003 2.143876 AGCCAACCCAATCCATGTAC 57.856 50.000 0.00 0.00 0.00 2.90
803 1004 0.738389 GCCAACCCAATCCATGTACG 59.262 55.000 0.00 0.00 0.00 3.67
804 1005 1.953311 GCCAACCCAATCCATGTACGT 60.953 52.381 0.00 0.00 0.00 3.57
878 1079 9.293404 ACCAATAATATTACGCTGTAGACTCTA 57.707 33.333 0.00 0.00 0.00 2.43
898 1099 6.939163 ACTCTAGTCATCACAATTTTGCTTCT 59.061 34.615 0.00 0.00 0.00 2.85
935 1136 5.187772 TCTGTATGTAGTTTCCTGCTGACAT 59.812 40.000 0.00 0.00 0.00 3.06
937 1138 3.769739 TGTAGTTTCCTGCTGACATGT 57.230 42.857 0.00 0.00 0.00 3.21
948 1149 5.661312 TCCTGCTGACATGTACCTAGTATTT 59.339 40.000 0.00 0.00 0.00 1.40
975 1176 9.979270 CTGTCTAATACTCTTAGCACAATTTTG 57.021 33.333 0.00 0.00 0.00 2.44
1025 1226 2.777692 ACCATACATTCGAACCCATCCT 59.222 45.455 0.00 0.00 0.00 3.24
1026 1227 3.141398 CCATACATTCGAACCCATCCTG 58.859 50.000 0.00 0.00 0.00 3.86
1105 1306 1.271597 GCAAAGATGGTCTCCAGTGGT 60.272 52.381 9.54 0.00 36.75 4.16
1112 1313 1.214062 GTCTCCAGTGGTCTCTGCG 59.786 63.158 9.54 0.00 34.47 5.18
1155 1356 2.695666 CAGGGACTCCGTAGATCACAAT 59.304 50.000 0.00 0.00 34.60 2.71
1464 1666 3.057245 GGAAAGGATGAACTGTTGGCTTC 60.057 47.826 0.00 0.00 0.00 3.86
1520 1722 0.736636 TGAGGTGGTATCTACACGCG 59.263 55.000 3.53 3.53 39.69 6.01
1528 1730 1.131883 GTATCTACACGCGTCACCTGT 59.868 52.381 9.86 6.67 0.00 4.00
1704 1906 4.716943 CTTGCTTCTCGAGATGGAAAAAC 58.283 43.478 27.21 13.06 31.36 2.43
1716 1918 1.673920 TGGAAAAACGCCTGTCAACTC 59.326 47.619 0.00 0.00 0.00 3.01
1717 1919 1.333791 GGAAAAACGCCTGTCAACTCG 60.334 52.381 0.00 0.00 0.00 4.18
1826 2028 4.070009 GGTGATAAGAAAGGTTTGGTCGT 58.930 43.478 0.00 0.00 0.00 4.34
1859 2061 4.867047 CGCTCTCTTTACACAGATGAATGT 59.133 41.667 0.00 0.00 0.00 2.71
2194 2396 8.779354 AACCTGCAAAATTTTGTACTGTAAAA 57.221 26.923 27.13 6.17 40.24 1.52
2195 2397 8.779354 ACCTGCAAAATTTTGTACTGTAAAAA 57.221 26.923 27.13 0.00 40.24 1.94
2235 2437 0.904649 TACTGACAGCACCCCATCTG 59.095 55.000 1.25 0.00 36.45 2.90
2252 2454 0.809385 CTGCTGATGGAACTTGCTGG 59.191 55.000 0.00 0.00 0.00 4.85
2264 2466 2.825205 ACTTGCTGGCAATGTTTTGTC 58.175 42.857 8.49 0.00 37.97 3.18
2278 2480 2.004583 TTTGTCGCGGTCTCTAATGG 57.995 50.000 6.13 0.00 0.00 3.16
2381 2584 6.710295 AGCACAGATGTAACTGAAACAATACA 59.290 34.615 0.00 0.00 40.63 2.29
2382 2585 7.017645 GCACAGATGTAACTGAAACAATACAG 58.982 38.462 0.00 0.00 40.63 2.74
2501 2711 2.945668 AGGGCACTGATTCGATAAAAGC 59.054 45.455 0.00 0.00 0.00 3.51
2503 2713 3.316308 GGGCACTGATTCGATAAAAGCAT 59.684 43.478 0.00 0.00 0.00 3.79
2524 2735 0.388907 ACGCACATTGCAAGATTGGC 60.389 50.000 4.94 3.39 45.36 4.52
2542 2754 1.654137 CGTGCACTGTTTTCACCGC 60.654 57.895 16.19 0.00 0.00 5.68
2632 2844 1.265095 GATCAACCATATGGCGCAGTG 59.735 52.381 22.18 11.78 39.32 3.66
2633 2845 0.747644 TCAACCATATGGCGCAGTGG 60.748 55.000 22.18 13.65 39.32 4.00
2634 2846 1.031571 CAACCATATGGCGCAGTGGT 61.032 55.000 22.18 14.34 46.41 4.16
2635 2847 0.748005 AACCATATGGCGCAGTGGTC 60.748 55.000 22.18 0.00 43.82 4.02
2672 2884 1.409064 TCGCATACCTTCTAGTGCTGG 59.591 52.381 0.07 0.00 35.52 4.85
2716 2928 8.618677 ACAGCATGATAATGAGTTTAATGACAG 58.381 33.333 0.00 0.00 39.69 3.51
2725 2937 6.554334 TGAGTTTAATGACAGGTAACAAGC 57.446 37.500 0.00 0.00 41.41 4.01
2726 2938 6.296026 TGAGTTTAATGACAGGTAACAAGCT 58.704 36.000 0.00 0.00 41.41 3.74
2727 2939 6.770785 TGAGTTTAATGACAGGTAACAAGCTT 59.229 34.615 0.00 0.00 41.41 3.74
2728 2940 6.970484 AGTTTAATGACAGGTAACAAGCTTG 58.030 36.000 24.84 24.84 41.41 4.01
2729 2941 6.546034 AGTTTAATGACAGGTAACAAGCTTGT 59.454 34.615 26.36 26.36 44.72 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 4.930963 TCTTGATCGCACACATTGTTTTT 58.069 34.783 0.00 0.00 0.00 1.94
14 15 4.566545 TCTTGATCGCACACATTGTTTT 57.433 36.364 0.00 0.00 0.00 2.43
15 16 4.275689 TCTTCTTGATCGCACACATTGTTT 59.724 37.500 0.00 0.00 0.00 2.83
16 17 3.814842 TCTTCTTGATCGCACACATTGTT 59.185 39.130 0.00 0.00 0.00 2.83
117 118 0.109689 CTCGTGGTCGACTCTGGAAC 60.110 60.000 16.46 4.08 41.35 3.62
122 123 1.030457 AAACACTCGTGGTCGACTCT 58.970 50.000 16.46 0.00 41.35 3.24
130 131 0.315869 GCGAACACAAACACTCGTGG 60.316 55.000 1.77 0.00 37.45 4.94
169 170 1.604023 ATAGGCGGCTCGGGAGTAG 60.604 63.158 17.67 0.00 0.00 2.57
170 171 1.901948 CATAGGCGGCTCGGGAGTA 60.902 63.158 17.67 0.00 0.00 2.59
171 172 3.227276 CATAGGCGGCTCGGGAGT 61.227 66.667 17.67 0.00 0.00 3.85
198 199 1.539929 GGCTCTGGATCGATCACCTTG 60.540 57.143 25.93 12.67 0.00 3.61
259 260 0.391793 CCTCGCTTCTCTGTTTCCCC 60.392 60.000 0.00 0.00 0.00 4.81
270 277 3.998156 GGTTTTCCCCCTCGCTTC 58.002 61.111 0.00 0.00 0.00 3.86
298 306 3.346734 GGCCACCATCTCCCCCAA 61.347 66.667 0.00 0.00 0.00 4.12
379 387 3.382832 CTTCCCTCTGCCGGTCGT 61.383 66.667 1.90 0.00 0.00 4.34
410 418 3.716539 TTCTTCTCGCGGGCCATCG 62.717 63.158 6.13 7.40 0.00 3.84
421 429 2.093394 GGTAGGACAAGGGCTTCTTCTC 60.093 54.545 0.00 0.00 32.41 2.87
442 450 2.112815 GGTTTGGGCGATCCTTCCG 61.113 63.158 0.00 0.00 36.20 4.30
457 468 1.741770 GCATGAACTCCTCGCGGTT 60.742 57.895 6.13 1.34 0.00 4.44
483 494 0.104725 CTATGGGCTCCTCCTCCCTT 60.105 60.000 0.00 0.00 43.04 3.95
530 541 1.447314 CCCAGAGTTCGCGGTAACC 60.447 63.158 6.13 0.00 0.00 2.85
531 542 0.735287 GTCCCAGAGTTCGCGGTAAC 60.735 60.000 6.13 4.07 0.00 2.50
614 625 2.925578 TTGATTCGCAGCAAAGATGG 57.074 45.000 0.00 0.00 0.00 3.51
616 627 4.707030 TCATTTGATTCGCAGCAAAGAT 57.293 36.364 4.60 0.00 37.41 2.40
619 630 4.437772 TCATCATTTGATTCGCAGCAAA 57.562 36.364 0.13 0.13 38.25 3.68
649 674 4.105697 ACAATCCCTTCACTTTACTTCCCA 59.894 41.667 0.00 0.00 0.00 4.37
653 678 5.891551 ACAACACAATCCCTTCACTTTACTT 59.108 36.000 0.00 0.00 0.00 2.24
686 711 8.902806 CATTTGATTCCTAAATTACTAGTGCCA 58.097 33.333 5.39 0.00 0.00 4.92
737 771 6.865834 AAGAGGTCTCTGACAGAATACATT 57.134 37.500 6.61 1.02 40.36 2.71
740 774 4.867608 GCAAAGAGGTCTCTGACAGAATAC 59.132 45.833 6.61 7.72 40.36 1.89
774 975 4.898861 TGGATTGGGTTGGCTAATAATTCC 59.101 41.667 0.00 0.00 0.00 3.01
781 982 2.917713 ACATGGATTGGGTTGGCTAA 57.082 45.000 0.00 0.00 0.00 3.09
782 983 2.420827 CGTACATGGATTGGGTTGGCTA 60.421 50.000 0.00 0.00 0.00 3.93
783 984 1.681780 CGTACATGGATTGGGTTGGCT 60.682 52.381 0.00 0.00 0.00 4.75
793 994 3.225104 ACGGGTATGTACGTACATGGAT 58.775 45.455 38.87 23.50 45.77 3.41
802 1003 2.218953 AGCATTGACGGGTATGTACG 57.781 50.000 0.00 0.00 0.00 3.67
860 1061 7.171167 GTGATGACTAGAGTCTACAGCGTAATA 59.829 40.741 10.87 0.00 44.99 0.98
863 1064 4.809958 GTGATGACTAGAGTCTACAGCGTA 59.190 45.833 10.87 0.00 44.99 4.42
864 1065 3.623960 GTGATGACTAGAGTCTACAGCGT 59.376 47.826 10.87 0.00 44.99 5.07
865 1066 3.623510 TGTGATGACTAGAGTCTACAGCG 59.376 47.826 10.87 0.00 44.99 5.18
866 1067 5.568685 TTGTGATGACTAGAGTCTACAGC 57.431 43.478 10.87 0.00 44.99 4.40
878 1079 4.986659 GCAAGAAGCAAAATTGTGATGACT 59.013 37.500 0.00 0.00 44.79 3.41
898 1099 7.182817 ACTACATACAGAATCCTACTTGCAA 57.817 36.000 0.00 0.00 0.00 4.08
912 1113 4.820897 TGTCAGCAGGAAACTACATACAG 58.179 43.478 0.00 0.00 40.21 2.74
913 1114 4.882842 TGTCAGCAGGAAACTACATACA 57.117 40.909 0.00 0.00 40.21 2.29
948 1149 9.944376 AAAATTGTGCTAAGAGTATTAGACAGA 57.056 29.630 8.73 2.45 0.00 3.41
975 1176 2.404995 AAGAGCCGCTGCATGAAGC 61.405 57.895 16.47 16.47 45.96 3.86
997 1198 1.308047 TCGAATGTATGGTGCATGGC 58.692 50.000 0.00 0.00 0.00 4.40
1004 1205 2.777692 AGGATGGGTTCGAATGTATGGT 59.222 45.455 0.00 0.00 0.00 3.55
1036 1237 2.906389 TCTGCAAGGTACAATCAGGAGT 59.094 45.455 0.00 0.00 0.00 3.85
1105 1306 0.904649 AATCCATGGACACGCAGAGA 59.095 50.000 18.99 0.00 0.00 3.10
1155 1356 2.337583 CGATTGAAGAGGAAGTTGCGA 58.662 47.619 0.00 0.00 0.00 5.10
1464 1666 5.915196 GCTTTGTAGTAGCTGAAAACTTTGG 59.085 40.000 0.00 0.00 35.74 3.28
1520 1722 1.667830 TGCAGCGCTTACAGGTGAC 60.668 57.895 7.50 0.00 39.23 3.67
1716 1918 2.009108 CTCAATCACACCATCCGCG 58.991 57.895 0.00 0.00 0.00 6.46
1717 1919 0.745845 AGCTCAATCACACCATCCGC 60.746 55.000 0.00 0.00 0.00 5.54
1802 2004 4.403734 GACCAAACCTTTCTTATCACCCA 58.596 43.478 0.00 0.00 0.00 4.51
1826 2028 4.014406 TGTAAAGAGAGCGGTATCTGTCA 58.986 43.478 13.16 9.42 0.00 3.58
1859 2061 4.794439 CGCCATGACTCGTGCCGA 62.794 66.667 0.00 0.00 0.00 5.54
2146 2348 3.287222 ACTTGTACAGTTGTGCCAATGT 58.713 40.909 0.00 0.00 27.32 2.71
2153 2355 4.334203 TGCAGGTTTACTTGTACAGTTGTG 59.666 41.667 0.00 0.00 36.88 3.33
2235 2437 1.246056 TGCCAGCAAGTTCCATCAGC 61.246 55.000 0.00 0.00 0.00 4.26
2252 2454 0.040425 AGACCGCGACAAAACATTGC 60.040 50.000 8.23 0.00 0.00 3.56
2264 2466 2.814919 AGATACTCCATTAGAGACCGCG 59.185 50.000 0.00 0.00 46.50 6.46
2278 2480 9.209175 ACGGATCAAATAAATTAGCAGATACTC 57.791 33.333 0.00 0.00 0.00 2.59
2381 2584 7.649306 CGAGATTTGAAATTGAAACAAACCTCT 59.351 33.333 0.00 0.00 40.16 3.69
2382 2585 7.435192 ACGAGATTTGAAATTGAAACAAACCTC 59.565 33.333 0.00 0.00 39.42 3.85
2393 2596 8.642020 GGAAAAGAATCACGAGATTTGAAATTG 58.358 33.333 9.51 0.00 44.30 2.32
2394 2597 8.359642 TGGAAAAGAATCACGAGATTTGAAATT 58.640 29.630 9.51 2.14 44.30 1.82
2524 2735 1.654137 GCGGTGAAAACAGTGCACG 60.654 57.895 12.01 9.15 33.48 5.34
2529 2740 3.572255 ACAAATATGGCGGTGAAAACAGT 59.428 39.130 0.00 0.00 0.00 3.55
2530 2741 4.173036 ACAAATATGGCGGTGAAAACAG 57.827 40.909 0.00 0.00 0.00 3.16
2531 2742 4.302455 CAACAAATATGGCGGTGAAAACA 58.698 39.130 0.00 0.00 0.00 2.83
2542 2754 3.119065 TGAGCCACATGCAACAAATATGG 60.119 43.478 0.00 0.00 44.83 2.74
2580 2792 8.706322 ACTAACCCAATATCAAACTGTCTTTT 57.294 30.769 0.00 0.00 0.00 2.27
2632 2844 2.193536 GCACCTGGTGTGGTTGACC 61.194 63.158 26.48 4.97 45.55 4.02
2633 2845 2.193536 GGCACCTGGTGTGGTTGAC 61.194 63.158 26.48 9.02 45.55 3.18
2634 2846 2.194597 GGCACCTGGTGTGGTTGA 59.805 61.111 26.48 0.00 45.55 3.18
2635 2847 1.898574 GAGGCACCTGGTGTGGTTG 60.899 63.158 26.48 1.93 45.55 3.77
2672 2884 0.871057 GTCTTTCAGGTGTGCTGAGC 59.129 55.000 0.00 0.00 31.98 4.26
2678 2890 2.497138 TCATGCTGTCTTTCAGGTGTG 58.503 47.619 0.00 0.00 43.78 3.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.