Multiple sequence alignment - TraesCS5A01G319000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G319000 chr5A 100.000 2002 0 0 2272 4273 529437862 529435861 0.000000e+00 3698.0
1 TraesCS5A01G319000 chr5A 100.000 1963 0 0 1 1963 529440133 529438171 0.000000e+00 3626.0
2 TraesCS5A01G319000 chr5D 94.118 1224 33 8 2272 3492 416626931 416625744 0.000000e+00 1825.0
3 TraesCS5A01G319000 chr5D 96.914 972 28 2 993 1963 416628708 416627738 0.000000e+00 1628.0
4 TraesCS5A01G319000 chr5D 86.648 352 36 9 1 345 416629434 416629087 3.120000e-101 379.0
5 TraesCS5A01G319000 chr5D 87.307 323 34 4 3956 4272 416625407 416625086 3.140000e-96 363.0
6 TraesCS5A01G319000 chr5B 96.095 973 30 4 993 1959 503531169 503530199 0.000000e+00 1580.0
7 TraesCS5A01G319000 chr5B 93.419 775 36 10 2662 3428 503528930 503528163 0.000000e+00 1134.0
8 TraesCS5A01G319000 chr5B 89.180 573 42 9 3709 4272 503527414 503526853 0.000000e+00 697.0
9 TraesCS5A01G319000 chr5B 92.564 390 14 5 2272 2661 503529382 503529008 2.910000e-151 545.0
10 TraesCS5A01G319000 chr5B 84.545 110 14 3 2510 2617 515126421 515126529 5.840000e-19 106.0
11 TraesCS5A01G319000 chr5B 94.444 54 3 0 1 54 503533151 503533098 2.740000e-12 84.2
12 TraesCS5A01G319000 chr1B 94.340 106 5 1 2513 2617 615122121 615122226 1.230000e-35 161.0
13 TraesCS5A01G319000 chr1A 93.939 99 4 2 2513 2610 544599653 544599750 9.570000e-32 148.0
14 TraesCS5A01G319000 chr1D 92.929 99 5 2 2513 2610 449466701 449466798 4.450000e-30 143.0
15 TraesCS5A01G319000 chr1D 92.000 100 7 1 2516 2614 421221496 421221397 5.760000e-29 139.0
16 TraesCS5A01G319000 chr7D 85.185 108 13 3 2512 2617 159645864 159645758 1.620000e-19 108.0
17 TraesCS5A01G319000 chr7B 84.906 106 14 2 2513 2617 361168551 361168655 5.840000e-19 106.0
18 TraesCS5A01G319000 chr2A 84.507 71 11 0 768 838 230967914 230967844 2.130000e-08 71.3
19 TraesCS5A01G319000 chrUn 97.059 34 1 0 3599 3632 12089167 12089134 1.660000e-04 58.4
20 TraesCS5A01G319000 chrUn 97.059 34 1 0 3599 3632 144871821 144871788 1.660000e-04 58.4
21 TraesCS5A01G319000 chrUn 97.059 34 1 0 3599 3632 144910242 144910209 1.660000e-04 58.4
22 TraesCS5A01G319000 chrUn 97.059 34 1 0 3599 3632 179872454 179872421 1.660000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G319000 chr5A 529435861 529440133 4272 True 3662.00 3698 100.00000 1 4273 2 chr5A.!!$R1 4272
1 TraesCS5A01G319000 chr5D 416625086 416629434 4348 True 1048.75 1825 91.24675 1 4272 4 chr5D.!!$R1 4271
2 TraesCS5A01G319000 chr5B 503526853 503533151 6298 True 808.04 1580 93.14040 1 4272 5 chr5B.!!$R1 4271

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
833 2394 0.033228 GCCGTGGGATCTCAGATCTG 59.967 60.0 17.07 17.07 0.00 2.90 F
882 2443 0.101579 CAAAAACGCCAACCGGAAGT 59.898 50.0 9.46 0.00 42.52 3.01 F
935 2496 0.103208 GACGCCGTCAGATCTGGAAT 59.897 55.0 22.42 2.99 32.09 3.01 F
936 2497 0.103208 ACGCCGTCAGATCTGGAATC 59.897 55.0 22.42 9.79 0.00 2.52 F
944 2505 0.181350 AGATCTGGAATCCAACGGCC 59.819 55.0 2.61 0.00 30.80 6.13 F
951 2512 0.391263 GAATCCAACGGCCGAGAAGT 60.391 55.0 35.90 16.60 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1652 3218 0.745128 GCAGCAGAGAAGAGCAGCAT 60.745 55.000 0.00 0.00 42.04 3.79 R
2537 4613 1.065551 GCTTATTTTGGCAGCTACCCG 59.934 52.381 0.00 0.00 0.00 5.28 R
2905 5059 0.246635 AGCACACTAAGCACCTACGG 59.753 55.000 0.00 0.00 0.00 4.02 R
2906 5060 1.726791 CAAGCACACTAAGCACCTACG 59.273 52.381 0.00 0.00 0.00 3.51 R
2953 5108 3.153919 GCACCCACAAAAGAACCATCTA 58.846 45.455 0.00 0.00 33.77 1.98 R
3411 5572 7.066525 TGTTTTCTCCGATATATCACCCAAAAC 59.933 37.037 20.45 20.45 32.91 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 1478 9.798994 GCATTCTTAAATGACAAGATTGAGAAT 57.201 29.630 0.00 10.57 44.25 2.40
154 1563 5.463154 ACCTCAGAAAGCTCTATATGGTCT 58.537 41.667 0.00 0.00 0.00 3.85
175 1584 7.097834 GGTCTTAAGCAACTTCTTAGAGCTTA 58.902 38.462 8.84 8.84 42.14 3.09
181 1594 7.986085 AGCAACTTCTTAGAGCTTAAAATGA 57.014 32.000 0.00 0.00 34.36 2.57
206 1619 5.868801 TCAACAAAGTTTCTTTTGAAGCAGG 59.131 36.000 5.58 0.00 41.30 4.85
207 1620 5.659440 ACAAAGTTTCTTTTGAAGCAGGA 57.341 34.783 5.58 0.00 41.30 3.86
214 1627 4.307032 TCTTTTGAAGCAGGATAAGGCT 57.693 40.909 0.00 0.00 43.46 4.58
240 1653 3.072476 CCTAGTGGTGGAAAAGGACTGAA 59.928 47.826 0.00 0.00 0.00 3.02
259 1673 1.501582 AGCCTTCCCACCATCTAGAC 58.498 55.000 0.00 0.00 0.00 2.59
276 1691 5.674525 TCTAGACTCAAGGCATGGTATTTG 58.325 41.667 0.00 0.00 0.00 2.32
277 1692 3.019564 AGACTCAAGGCATGGTATTTGC 58.980 45.455 0.00 0.00 39.41 3.68
285 1700 6.154192 TCAAGGCATGGTATTTGCAATTTAGA 59.846 34.615 0.00 0.00 41.95 2.10
298 1713 5.520022 GCAATTTAGATTTGTTGCACCAG 57.480 39.130 4.26 0.00 44.63 4.00
309 1724 6.548441 TTTGTTGCACCAGTTATACTGTAC 57.452 37.500 6.13 0.00 44.50 2.90
311 1726 4.022155 TGTTGCACCAGTTATACTGTACGA 60.022 41.667 6.13 0.00 44.50 3.43
314 1729 4.643334 TGCACCAGTTATACTGTACGAGAT 59.357 41.667 6.13 0.00 44.50 2.75
316 1731 5.220989 GCACCAGTTATACTGTACGAGATCA 60.221 44.000 6.13 0.00 44.50 2.92
324 1739 9.219497 GTTATACTGTACGAGATCACTTACAAC 57.781 37.037 10.00 3.07 0.00 3.32
329 1744 6.460781 TGTACGAGATCACTTACAACCATTT 58.539 36.000 6.96 0.00 0.00 2.32
364 1782 9.877178 AACTCTATTCACTAAGTGAGTTTATGG 57.123 33.333 3.58 0.00 43.69 2.74
365 1783 9.036980 ACTCTATTCACTAAGTGAGTTTATGGT 57.963 33.333 0.00 0.00 43.69 3.55
378 1796 9.541884 AGTGAGTTTATGGTAAATTATTTGGGT 57.458 29.630 0.00 0.00 0.00 4.51
379 1797 9.581099 GTGAGTTTATGGTAAATTATTTGGGTG 57.419 33.333 0.00 0.00 0.00 4.61
380 1798 8.254508 TGAGTTTATGGTAAATTATTTGGGTGC 58.745 33.333 0.00 0.00 0.00 5.01
381 1799 7.561251 AGTTTATGGTAAATTATTTGGGTGCC 58.439 34.615 0.00 0.00 0.00 5.01
382 1800 7.181125 AGTTTATGGTAAATTATTTGGGTGCCA 59.819 33.333 0.00 2.25 0.00 4.92
383 1801 7.496346 TTATGGTAAATTATTTGGGTGCCAA 57.504 32.000 0.00 0.00 42.29 4.52
384 1802 5.413309 TGGTAAATTATTTGGGTGCCAAG 57.587 39.130 0.00 0.00 44.84 3.61
385 1803 4.841246 TGGTAAATTATTTGGGTGCCAAGT 59.159 37.500 0.00 0.00 44.84 3.16
386 1804 5.308237 TGGTAAATTATTTGGGTGCCAAGTT 59.692 36.000 0.00 0.00 44.84 2.66
387 1805 6.183361 TGGTAAATTATTTGGGTGCCAAGTTT 60.183 34.615 0.00 0.00 44.84 2.66
388 1806 7.016268 TGGTAAATTATTTGGGTGCCAAGTTTA 59.984 33.333 0.00 0.00 44.84 2.01
389 1807 8.044309 GGTAAATTATTTGGGTGCCAAGTTTAT 58.956 33.333 0.00 0.00 44.84 1.40
390 1808 7.920160 AAATTATTTGGGTGCCAAGTTTATG 57.080 32.000 0.00 0.00 44.84 1.90
391 1809 6.619329 ATTATTTGGGTGCCAAGTTTATGT 57.381 33.333 0.00 0.00 44.84 2.29
392 1810 4.972751 ATTTGGGTGCCAAGTTTATGTT 57.027 36.364 0.00 0.00 44.84 2.71
393 1811 4.762289 TTTGGGTGCCAAGTTTATGTTT 57.238 36.364 0.00 0.00 44.84 2.83
394 1812 5.871396 TTTGGGTGCCAAGTTTATGTTTA 57.129 34.783 0.00 0.00 44.84 2.01
395 1813 6.426646 TTTGGGTGCCAAGTTTATGTTTAT 57.573 33.333 0.00 0.00 44.84 1.40
396 1814 6.426646 TTGGGTGCCAAGTTTATGTTTATT 57.573 33.333 0.00 0.00 38.75 1.40
397 1815 7.540474 TTGGGTGCCAAGTTTATGTTTATTA 57.460 32.000 0.00 0.00 38.75 0.98
398 1816 7.726033 TGGGTGCCAAGTTTATGTTTATTAT 57.274 32.000 0.00 0.00 0.00 1.28
399 1817 8.824756 TGGGTGCCAAGTTTATGTTTATTATA 57.175 30.769 0.00 0.00 0.00 0.98
400 1818 9.427821 TGGGTGCCAAGTTTATGTTTATTATAT 57.572 29.630 0.00 0.00 0.00 0.86
401 1819 9.908152 GGGTGCCAAGTTTATGTTTATTATATC 57.092 33.333 0.00 0.00 0.00 1.63
430 1848 4.155310 GTTCCACTAACCATCGTTTTGG 57.845 45.455 0.00 0.00 42.82 3.28
442 1860 6.435430 CCATCGTTTTGGTGAGAATATGAA 57.565 37.500 0.00 0.00 31.74 2.57
443 1861 6.851609 CCATCGTTTTGGTGAGAATATGAAA 58.148 36.000 0.00 0.00 31.74 2.69
444 1862 7.312154 CCATCGTTTTGGTGAGAATATGAAAA 58.688 34.615 0.00 0.00 31.74 2.29
445 1863 7.485913 CCATCGTTTTGGTGAGAATATGAAAAG 59.514 37.037 0.00 0.00 31.74 2.27
446 1864 7.504924 TCGTTTTGGTGAGAATATGAAAAGT 57.495 32.000 0.00 0.00 0.00 2.66
447 1865 7.936584 TCGTTTTGGTGAGAATATGAAAAGTT 58.063 30.769 0.00 0.00 0.00 2.66
448 1866 9.058174 TCGTTTTGGTGAGAATATGAAAAGTTA 57.942 29.630 0.00 0.00 0.00 2.24
449 1867 9.672086 CGTTTTGGTGAGAATATGAAAAGTTAA 57.328 29.630 0.00 0.00 0.00 2.01
455 1873 9.869844 GGTGAGAATATGAAAAGTTAATCATCG 57.130 33.333 7.21 0.00 37.46 3.84
461 1879 6.610741 ATGAAAAGTTAATCATCGAGAGGC 57.389 37.500 0.00 0.00 30.62 4.70
462 1880 5.487433 TGAAAAGTTAATCATCGAGAGGCA 58.513 37.500 0.00 0.00 0.00 4.75
463 1881 5.351465 TGAAAAGTTAATCATCGAGAGGCAC 59.649 40.000 0.00 0.00 0.00 5.01
464 1882 4.471904 AAGTTAATCATCGAGAGGCACA 57.528 40.909 0.00 0.00 0.00 4.57
465 1883 4.471904 AGTTAATCATCGAGAGGCACAA 57.528 40.909 0.00 0.00 0.00 3.33
466 1884 4.437239 AGTTAATCATCGAGAGGCACAAG 58.563 43.478 0.00 0.00 0.00 3.16
467 1885 4.081420 AGTTAATCATCGAGAGGCACAAGT 60.081 41.667 0.00 0.00 0.00 3.16
468 1886 3.340814 AATCATCGAGAGGCACAAGTT 57.659 42.857 0.00 0.00 0.00 2.66
469 1887 4.471904 AATCATCGAGAGGCACAAGTTA 57.528 40.909 0.00 0.00 0.00 2.24
470 1888 4.679373 ATCATCGAGAGGCACAAGTTAT 57.321 40.909 0.00 0.00 0.00 1.89
471 1889 4.046938 TCATCGAGAGGCACAAGTTATC 57.953 45.455 0.00 0.00 0.00 1.75
472 1890 3.447229 TCATCGAGAGGCACAAGTTATCA 59.553 43.478 0.00 0.00 0.00 2.15
473 1891 3.953712 TCGAGAGGCACAAGTTATCAA 57.046 42.857 0.00 0.00 0.00 2.57
474 1892 4.471904 TCGAGAGGCACAAGTTATCAAT 57.528 40.909 0.00 0.00 0.00 2.57
475 1893 4.183865 TCGAGAGGCACAAGTTATCAATG 58.816 43.478 0.00 0.00 0.00 2.82
476 1894 4.081697 TCGAGAGGCACAAGTTATCAATGA 60.082 41.667 0.00 0.00 0.00 2.57
477 1895 4.033358 CGAGAGGCACAAGTTATCAATGAC 59.967 45.833 0.00 0.00 0.00 3.06
478 1896 3.935203 AGAGGCACAAGTTATCAATGACG 59.065 43.478 0.00 0.00 0.00 4.35
479 1897 3.009723 AGGCACAAGTTATCAATGACGG 58.990 45.455 0.00 0.00 0.00 4.79
480 1898 3.006940 GGCACAAGTTATCAATGACGGA 58.993 45.455 0.00 0.00 0.00 4.69
481 1899 3.181510 GGCACAAGTTATCAATGACGGAC 60.182 47.826 0.00 0.00 0.00 4.79
482 1900 3.483574 GCACAAGTTATCAATGACGGACG 60.484 47.826 0.00 0.00 0.00 4.79
483 1901 3.924073 CACAAGTTATCAATGACGGACGA 59.076 43.478 0.00 0.00 0.00 4.20
484 1902 4.031765 CACAAGTTATCAATGACGGACGAG 59.968 45.833 0.00 0.00 0.00 4.18
485 1903 2.810650 AGTTATCAATGACGGACGAGC 58.189 47.619 0.00 0.00 0.00 5.03
486 1904 2.427453 AGTTATCAATGACGGACGAGCT 59.573 45.455 0.00 0.00 0.00 4.09
487 1905 2.492019 TATCAATGACGGACGAGCTG 57.508 50.000 0.00 0.00 0.00 4.24
488 1906 0.179100 ATCAATGACGGACGAGCTGG 60.179 55.000 0.00 0.00 0.00 4.85
489 1907 1.811266 CAATGACGGACGAGCTGGG 60.811 63.158 0.00 0.00 0.00 4.45
490 1908 1.982395 AATGACGGACGAGCTGGGA 60.982 57.895 0.00 0.00 0.00 4.37
491 1909 1.330655 AATGACGGACGAGCTGGGAT 61.331 55.000 0.00 0.00 0.00 3.85
492 1910 1.330655 ATGACGGACGAGCTGGGATT 61.331 55.000 0.00 0.00 0.00 3.01
493 1911 1.227002 GACGGACGAGCTGGGATTC 60.227 63.158 0.00 0.00 0.00 2.52
494 1912 1.668101 GACGGACGAGCTGGGATTCT 61.668 60.000 0.00 0.00 0.00 2.40
495 1913 1.258445 ACGGACGAGCTGGGATTCTT 61.258 55.000 0.00 0.00 0.00 2.52
496 1914 0.108138 CGGACGAGCTGGGATTCTTT 60.108 55.000 0.00 0.00 0.00 2.52
497 1915 1.657822 GGACGAGCTGGGATTCTTTC 58.342 55.000 0.00 0.00 0.00 2.62
498 1916 1.208293 GGACGAGCTGGGATTCTTTCT 59.792 52.381 0.00 0.00 0.00 2.52
499 1917 2.545731 GACGAGCTGGGATTCTTTCTC 58.454 52.381 0.00 0.00 0.00 2.87
500 1918 1.902508 ACGAGCTGGGATTCTTTCTCA 59.097 47.619 0.00 0.00 32.49 3.27
501 1919 2.303022 ACGAGCTGGGATTCTTTCTCAA 59.697 45.455 0.00 0.00 33.30 3.02
502 1920 3.054802 ACGAGCTGGGATTCTTTCTCAAT 60.055 43.478 0.00 0.00 33.30 2.57
503 1921 3.559242 CGAGCTGGGATTCTTTCTCAATC 59.441 47.826 0.00 0.00 33.30 2.67
504 1922 4.682859 CGAGCTGGGATTCTTTCTCAATCT 60.683 45.833 0.00 0.00 33.30 2.40
505 1923 4.779696 AGCTGGGATTCTTTCTCAATCTC 58.220 43.478 0.00 0.00 33.30 2.75
506 1924 3.882288 GCTGGGATTCTTTCTCAATCTCC 59.118 47.826 0.00 0.00 33.30 3.71
507 1925 4.627255 GCTGGGATTCTTTCTCAATCTCCA 60.627 45.833 0.00 0.00 33.30 3.86
508 1926 5.503927 CTGGGATTCTTTCTCAATCTCCAA 58.496 41.667 0.00 0.00 33.30 3.53
509 1927 6.083487 TGGGATTCTTTCTCAATCTCCAAT 57.917 37.500 0.00 0.00 29.52 3.16
510 1928 6.496743 TGGGATTCTTTCTCAATCTCCAATT 58.503 36.000 0.00 0.00 29.52 2.32
511 1929 7.642186 TGGGATTCTTTCTCAATCTCCAATTA 58.358 34.615 0.00 0.00 29.52 1.40
512 1930 8.115384 TGGGATTCTTTCTCAATCTCCAATTAA 58.885 33.333 0.00 0.00 29.52 1.40
513 1931 8.971073 GGGATTCTTTCTCAATCTCCAATTAAA 58.029 33.333 0.00 0.00 31.82 1.52
514 1932 9.794685 GGATTCTTTCTCAATCTCCAATTAAAC 57.205 33.333 0.00 0.00 31.82 2.01
519 1937 9.415544 CTTTCTCAATCTCCAATTAAACAAAGG 57.584 33.333 0.00 0.00 0.00 3.11
520 1938 8.704849 TTCTCAATCTCCAATTAAACAAAGGA 57.295 30.769 0.00 0.00 0.00 3.36
521 1939 8.704849 TCTCAATCTCCAATTAAACAAAGGAA 57.295 30.769 0.00 0.00 0.00 3.36
522 1940 8.796475 TCTCAATCTCCAATTAAACAAAGGAAG 58.204 33.333 0.00 0.00 0.00 3.46
523 1941 7.895759 TCAATCTCCAATTAAACAAAGGAAGG 58.104 34.615 0.00 0.00 0.00 3.46
528 1946 6.811954 TCCAATTAAACAAAGGAAGGAACAC 58.188 36.000 0.00 0.00 0.00 3.32
593 2024 9.739786 CGGATTTAATAAGTTCAAATGCAAAAC 57.260 29.630 0.00 0.00 31.67 2.43
608 2039 7.575414 AATGCAAAACATATATACGAACCCA 57.425 32.000 0.00 0.00 38.34 4.51
617 2048 8.149973 ACATATATACGAACCCAAATGTCAAC 57.850 34.615 0.00 0.00 0.00 3.18
647 2208 5.581605 TGAGAAAACAGTTGCAGATCAAAC 58.418 37.500 0.00 0.00 36.26 2.93
657 2218 1.338769 GCAGATCAAACCTACCACCGT 60.339 52.381 0.00 0.00 0.00 4.83
664 2225 2.677524 CCTACCACCGTCGTCCCA 60.678 66.667 0.00 0.00 0.00 4.37
668 2229 1.684983 CTACCACCGTCGTCCCATAAT 59.315 52.381 0.00 0.00 0.00 1.28
671 2232 3.499338 ACCACCGTCGTCCCATAATATA 58.501 45.455 0.00 0.00 0.00 0.86
676 2237 4.828939 ACCGTCGTCCCATAATATAAGACA 59.171 41.667 0.00 0.00 0.00 3.41
697 2258 8.421673 AGACATTTCTAATCTAAGCCGTAAAC 57.578 34.615 0.00 0.00 0.00 2.01
699 2260 7.971455 ACATTTCTAATCTAAGCCGTAAACAC 58.029 34.615 0.00 0.00 0.00 3.32
710 2271 8.382130 TCTAAGCCGTAAACACGTTTTATATTG 58.618 33.333 0.00 0.00 34.23 1.90
720 2281 8.980143 AACACGTTTTATATTGAGGGAATTTG 57.020 30.769 0.00 0.00 0.00 2.32
745 2306 5.064441 AGGTACATTTGCAATGAAAGCTC 57.936 39.130 0.00 0.00 0.00 4.09
747 2308 5.010922 AGGTACATTTGCAATGAAAGCTCAA 59.989 36.000 0.00 0.00 34.49 3.02
752 2313 6.421801 ACATTTGCAATGAAAGCTCAAAGTAC 59.578 34.615 0.00 0.00 34.49 2.73
753 2314 4.503741 TGCAATGAAAGCTCAAAGTACC 57.496 40.909 0.00 0.00 34.49 3.34
754 2315 4.144297 TGCAATGAAAGCTCAAAGTACCT 58.856 39.130 0.00 0.00 34.49 3.08
755 2316 4.216257 TGCAATGAAAGCTCAAAGTACCTC 59.784 41.667 0.00 0.00 34.49 3.85
756 2317 4.670221 GCAATGAAAGCTCAAAGTACCTCG 60.670 45.833 0.00 0.00 34.49 4.63
757 2318 3.040147 TGAAAGCTCAAAGTACCTCGG 57.960 47.619 0.00 0.00 0.00 4.63
758 2319 2.367567 TGAAAGCTCAAAGTACCTCGGT 59.632 45.455 0.00 0.00 0.00 4.69
759 2320 2.457366 AAGCTCAAAGTACCTCGGTG 57.543 50.000 0.00 0.00 0.00 4.94
760 2321 0.608640 AGCTCAAAGTACCTCGGTGG 59.391 55.000 0.00 0.00 42.93 4.61
770 2331 1.823295 CCTCGGTGGTGGTATCAGG 59.177 63.158 0.00 0.00 0.00 3.86
771 2332 0.976073 CCTCGGTGGTGGTATCAGGT 60.976 60.000 0.00 0.00 0.00 4.00
772 2333 0.175760 CTCGGTGGTGGTATCAGGTG 59.824 60.000 0.00 0.00 0.00 4.00
773 2334 0.251877 TCGGTGGTGGTATCAGGTGA 60.252 55.000 0.00 0.00 0.00 4.02
774 2335 0.830648 CGGTGGTGGTATCAGGTGAT 59.169 55.000 0.00 0.00 38.51 3.06
775 2336 2.036387 CGGTGGTGGTATCAGGTGATA 58.964 52.381 0.00 0.00 36.05 2.15
787 2348 7.787725 GTATCAGGTGATACCAAGGTTTAAG 57.212 40.000 16.32 0.00 46.87 1.85
788 2349 5.836024 TCAGGTGATACCAAGGTTTAAGT 57.164 39.130 0.00 0.00 41.95 2.24
789 2350 5.556915 TCAGGTGATACCAAGGTTTAAGTG 58.443 41.667 0.00 0.00 41.95 3.16
790 2351 5.308497 TCAGGTGATACCAAGGTTTAAGTGA 59.692 40.000 0.00 0.00 41.95 3.41
791 2352 6.012858 TCAGGTGATACCAAGGTTTAAGTGAT 60.013 38.462 0.00 0.00 41.95 3.06
792 2353 7.181305 TCAGGTGATACCAAGGTTTAAGTGATA 59.819 37.037 0.00 0.00 41.95 2.15
793 2354 7.280205 CAGGTGATACCAAGGTTTAAGTGATAC 59.720 40.741 0.00 0.00 41.95 2.24
794 2355 6.541278 GGTGATACCAAGGTTTAAGTGATACC 59.459 42.308 0.00 0.00 38.42 2.73
795 2356 7.107542 GTGATACCAAGGTTTAAGTGATACCA 58.892 38.462 0.00 0.00 34.32 3.25
796 2357 7.773690 GTGATACCAAGGTTTAAGTGATACCAT 59.226 37.037 0.00 0.00 34.32 3.55
797 2358 7.773224 TGATACCAAGGTTTAAGTGATACCATG 59.227 37.037 0.00 0.00 34.32 3.66
798 2359 6.134535 ACCAAGGTTTAAGTGATACCATGA 57.865 37.500 0.00 0.00 33.63 3.07
799 2360 6.731467 ACCAAGGTTTAAGTGATACCATGAT 58.269 36.000 0.00 0.00 33.63 2.45
800 2361 7.867921 ACCAAGGTTTAAGTGATACCATGATA 58.132 34.615 0.00 0.00 33.63 2.15
801 2362 7.773690 ACCAAGGTTTAAGTGATACCATGATAC 59.226 37.037 0.00 0.00 33.63 2.24
802 2363 7.042051 CCAAGGTTTAAGTGATACCATGATACG 60.042 40.741 0.00 0.00 33.63 3.06
803 2364 6.522054 AGGTTTAAGTGATACCATGATACGG 58.478 40.000 0.00 0.00 34.32 4.02
804 2365 5.699458 GGTTTAAGTGATACCATGATACGGG 59.301 44.000 0.00 0.00 32.12 5.28
805 2366 3.402628 AAGTGATACCATGATACGGGC 57.597 47.619 0.00 0.00 0.00 6.13
806 2367 2.609747 AGTGATACCATGATACGGGCT 58.390 47.619 0.00 0.00 0.00 5.19
807 2368 2.972713 AGTGATACCATGATACGGGCTT 59.027 45.455 0.00 0.00 0.00 4.35
808 2369 3.006967 AGTGATACCATGATACGGGCTTC 59.993 47.826 0.00 0.00 0.00 3.86
809 2370 2.301870 TGATACCATGATACGGGCTTCC 59.698 50.000 0.00 0.00 0.00 3.46
821 2382 4.821589 GCTTCCGAGAGCCGTGGG 62.822 72.222 0.00 0.00 36.66 4.61
822 2383 3.068691 CTTCCGAGAGCCGTGGGA 61.069 66.667 0.00 0.00 36.31 4.37
823 2384 2.363795 TTCCGAGAGCCGTGGGAT 60.364 61.111 0.00 0.00 36.31 3.85
824 2385 2.356818 CTTCCGAGAGCCGTGGGATC 62.357 65.000 0.00 0.00 38.56 3.36
828 2389 3.947173 AGAGCCGTGGGATCTCAG 58.053 61.111 0.00 0.00 46.28 3.35
829 2390 1.307986 AGAGCCGTGGGATCTCAGA 59.692 57.895 0.00 0.00 46.28 3.27
830 2391 0.105760 AGAGCCGTGGGATCTCAGAT 60.106 55.000 0.00 0.00 46.28 2.90
831 2392 0.316841 GAGCCGTGGGATCTCAGATC 59.683 60.000 6.05 6.05 34.95 2.75
832 2393 0.105760 AGCCGTGGGATCTCAGATCT 60.106 55.000 14.54 0.00 0.00 2.75
833 2394 0.033228 GCCGTGGGATCTCAGATCTG 59.967 60.000 17.07 17.07 0.00 2.90
834 2395 1.697284 CCGTGGGATCTCAGATCTGA 58.303 55.000 23.75 23.75 38.06 3.27
835 2396 2.246469 CCGTGGGATCTCAGATCTGAT 58.754 52.381 25.30 12.24 39.13 2.90
836 2397 2.029200 CCGTGGGATCTCAGATCTGATG 60.029 54.545 25.30 18.23 39.13 3.07
837 2398 2.029200 CGTGGGATCTCAGATCTGATGG 60.029 54.545 25.30 14.98 39.13 3.51
838 2399 1.976404 TGGGATCTCAGATCTGATGGC 59.024 52.381 25.30 16.05 39.13 4.40
839 2400 2.259012 GGGATCTCAGATCTGATGGCT 58.741 52.381 25.30 10.50 39.13 4.75
840 2401 3.181414 TGGGATCTCAGATCTGATGGCTA 60.181 47.826 25.30 9.59 39.13 3.93
841 2402 3.195396 GGGATCTCAGATCTGATGGCTAC 59.805 52.174 25.30 13.26 39.13 3.58
842 2403 3.195396 GGATCTCAGATCTGATGGCTACC 59.805 52.174 25.30 17.34 39.13 3.18
843 2404 2.234143 TCTCAGATCTGATGGCTACCG 58.766 52.381 25.30 11.43 39.13 4.02
844 2405 0.676184 TCAGATCTGATGGCTACCGC 59.324 55.000 21.67 0.00 34.14 5.68
845 2406 0.390492 CAGATCTGATGGCTACCGCA 59.610 55.000 18.34 0.00 38.10 5.69
846 2407 1.123077 AGATCTGATGGCTACCGCAA 58.877 50.000 0.00 0.00 38.10 4.85
847 2408 1.069823 AGATCTGATGGCTACCGCAAG 59.930 52.381 0.00 0.00 38.10 4.01
848 2409 0.533755 ATCTGATGGCTACCGCAAGC 60.534 55.000 0.00 0.00 41.99 4.01
849 2410 1.153289 CTGATGGCTACCGCAAGCT 60.153 57.895 7.11 0.00 42.37 3.74
850 2411 0.745845 CTGATGGCTACCGCAAGCTT 60.746 55.000 0.00 0.00 42.37 3.74
851 2412 0.322456 TGATGGCTACCGCAAGCTTT 60.322 50.000 0.00 0.00 42.37 3.51
852 2413 0.811281 GATGGCTACCGCAAGCTTTT 59.189 50.000 0.00 0.00 42.37 2.27
853 2414 0.527565 ATGGCTACCGCAAGCTTTTG 59.472 50.000 0.00 0.00 42.37 2.44
854 2415 0.536233 TGGCTACCGCAAGCTTTTGA 60.536 50.000 0.00 0.00 42.37 2.69
855 2416 0.596082 GGCTACCGCAAGCTTTTGAA 59.404 50.000 0.00 0.00 42.37 2.69
856 2417 1.666023 GGCTACCGCAAGCTTTTGAAC 60.666 52.381 0.00 0.00 42.37 3.18
857 2418 1.001815 GCTACCGCAAGCTTTTGAACA 60.002 47.619 0.00 0.00 39.50 3.18
858 2419 2.351738 GCTACCGCAAGCTTTTGAACAT 60.352 45.455 0.00 0.00 39.50 2.71
859 2420 2.888834 ACCGCAAGCTTTTGAACATT 57.111 40.000 0.00 0.00 0.00 2.71
860 2421 3.177997 ACCGCAAGCTTTTGAACATTT 57.822 38.095 0.00 0.00 0.00 2.32
861 2422 3.530535 ACCGCAAGCTTTTGAACATTTT 58.469 36.364 0.00 0.00 0.00 1.82
862 2423 3.309410 ACCGCAAGCTTTTGAACATTTTG 59.691 39.130 0.00 0.00 0.00 2.44
863 2424 3.282428 CGCAAGCTTTTGAACATTTTGC 58.718 40.909 0.00 0.00 36.88 3.68
864 2425 3.242349 CGCAAGCTTTTGAACATTTTGCA 60.242 39.130 0.00 0.00 39.36 4.08
865 2426 4.660105 GCAAGCTTTTGAACATTTTGCAA 58.340 34.783 0.00 0.00 39.25 4.08
866 2427 5.094134 GCAAGCTTTTGAACATTTTGCAAA 58.906 33.333 8.05 8.05 39.25 3.68
867 2428 5.572126 GCAAGCTTTTGAACATTTTGCAAAA 59.428 32.000 25.76 25.76 39.25 2.44
868 2429 6.089150 GCAAGCTTTTGAACATTTTGCAAAAA 59.911 30.769 27.10 8.85 39.94 1.94
869 2430 7.438701 CAAGCTTTTGAACATTTTGCAAAAAC 58.561 30.769 27.10 18.03 39.94 2.43
870 2431 5.794448 AGCTTTTGAACATTTTGCAAAAACG 59.206 32.000 27.10 22.05 39.94 3.60
871 2432 5.496813 GCTTTTGAACATTTTGCAAAAACGC 60.497 36.000 27.10 14.41 39.94 4.84
872 2433 3.665173 TGAACATTTTGCAAAAACGCC 57.335 38.095 27.10 16.80 0.00 5.68
873 2434 3.002791 TGAACATTTTGCAAAAACGCCA 58.997 36.364 27.10 18.85 0.00 5.69
874 2435 3.436704 TGAACATTTTGCAAAAACGCCAA 59.563 34.783 27.10 9.99 0.00 4.52
875 2436 3.397405 ACATTTTGCAAAAACGCCAAC 57.603 38.095 27.10 0.00 0.00 3.77
876 2437 2.096657 ACATTTTGCAAAAACGCCAACC 59.903 40.909 27.10 0.00 0.00 3.77
877 2438 0.721718 TTTTGCAAAAACGCCAACCG 59.278 45.000 21.94 0.00 44.21 4.44
878 2439 1.084370 TTTGCAAAAACGCCAACCGG 61.084 50.000 10.02 0.00 42.52 5.28
879 2440 1.945354 TTGCAAAAACGCCAACCGGA 61.945 50.000 9.46 0.00 42.52 5.14
880 2441 1.227002 GCAAAAACGCCAACCGGAA 60.227 52.632 9.46 0.00 42.52 4.30
881 2442 1.212455 GCAAAAACGCCAACCGGAAG 61.212 55.000 9.46 0.00 42.52 3.46
882 2443 0.101579 CAAAAACGCCAACCGGAAGT 59.898 50.000 9.46 0.00 42.52 3.01
883 2444 0.382873 AAAAACGCCAACCGGAAGTC 59.617 50.000 9.46 0.00 42.52 3.01
884 2445 0.464916 AAAACGCCAACCGGAAGTCT 60.465 50.000 9.46 0.00 42.52 3.24
885 2446 0.464916 AAACGCCAACCGGAAGTCTT 60.465 50.000 9.46 0.00 42.52 3.01
886 2447 0.393820 AACGCCAACCGGAAGTCTTA 59.606 50.000 9.46 0.00 42.52 2.10
887 2448 0.393820 ACGCCAACCGGAAGTCTTAA 59.606 50.000 9.46 0.00 42.52 1.85
888 2449 1.202675 ACGCCAACCGGAAGTCTTAAA 60.203 47.619 9.46 0.00 42.52 1.52
889 2450 1.874872 CGCCAACCGGAAGTCTTAAAA 59.125 47.619 9.46 0.00 0.00 1.52
890 2451 2.486592 CGCCAACCGGAAGTCTTAAAAT 59.513 45.455 9.46 0.00 0.00 1.82
891 2452 3.057806 CGCCAACCGGAAGTCTTAAAATT 60.058 43.478 9.46 0.00 0.00 1.82
892 2453 4.154556 CGCCAACCGGAAGTCTTAAAATTA 59.845 41.667 9.46 0.00 0.00 1.40
893 2454 5.396484 GCCAACCGGAAGTCTTAAAATTAC 58.604 41.667 9.46 0.00 0.00 1.89
894 2455 5.624292 CCAACCGGAAGTCTTAAAATTACG 58.376 41.667 9.46 0.00 0.00 3.18
895 2456 5.179929 CCAACCGGAAGTCTTAAAATTACGT 59.820 40.000 9.46 0.00 0.00 3.57
896 2457 5.851047 ACCGGAAGTCTTAAAATTACGTG 57.149 39.130 9.46 0.00 0.00 4.49
897 2458 4.152938 ACCGGAAGTCTTAAAATTACGTGC 59.847 41.667 9.46 0.00 0.00 5.34
898 2459 4.152759 CCGGAAGTCTTAAAATTACGTGCA 59.847 41.667 0.00 0.00 0.00 4.57
899 2460 5.313623 CGGAAGTCTTAAAATTACGTGCAG 58.686 41.667 0.00 0.00 0.00 4.41
900 2461 5.119588 CGGAAGTCTTAAAATTACGTGCAGA 59.880 40.000 0.00 0.00 0.00 4.26
901 2462 6.183360 CGGAAGTCTTAAAATTACGTGCAGAT 60.183 38.462 0.00 0.00 0.00 2.90
902 2463 7.009815 CGGAAGTCTTAAAATTACGTGCAGATA 59.990 37.037 0.00 0.00 0.00 1.98
903 2464 8.114905 GGAAGTCTTAAAATTACGTGCAGATAC 58.885 37.037 0.00 0.00 0.00 2.24
904 2465 8.542497 AAGTCTTAAAATTACGTGCAGATACA 57.458 30.769 0.00 0.00 0.00 2.29
905 2466 8.542497 AGTCTTAAAATTACGTGCAGATACAA 57.458 30.769 0.00 0.00 0.00 2.41
906 2467 9.162764 AGTCTTAAAATTACGTGCAGATACAAT 57.837 29.630 0.00 0.00 0.00 2.71
909 2470 9.370126 CTTAAAATTACGTGCAGATACAATAGC 57.630 33.333 0.00 0.00 0.00 2.97
910 2471 7.553881 AAAATTACGTGCAGATACAATAGCT 57.446 32.000 0.00 0.00 0.00 3.32
911 2472 6.771188 AATTACGTGCAGATACAATAGCTC 57.229 37.500 0.00 0.00 0.00 4.09
912 2473 5.515797 TTACGTGCAGATACAATAGCTCT 57.484 39.130 0.00 0.00 0.00 4.09
913 2474 4.392921 ACGTGCAGATACAATAGCTCTT 57.607 40.909 0.00 0.00 0.00 2.85
914 2475 4.759782 ACGTGCAGATACAATAGCTCTTT 58.240 39.130 0.00 0.00 0.00 2.52
915 2476 5.902681 ACGTGCAGATACAATAGCTCTTTA 58.097 37.500 0.00 0.00 0.00 1.85
916 2477 5.980116 ACGTGCAGATACAATAGCTCTTTAG 59.020 40.000 0.00 0.00 0.00 1.85
917 2478 6.183360 ACGTGCAGATACAATAGCTCTTTAGA 60.183 38.462 0.00 0.00 0.00 2.10
918 2479 6.143118 CGTGCAGATACAATAGCTCTTTAGAC 59.857 42.308 0.00 0.00 0.00 2.59
919 2480 6.143118 GTGCAGATACAATAGCTCTTTAGACG 59.857 42.308 0.00 0.00 0.00 4.18
920 2481 5.117897 GCAGATACAATAGCTCTTTAGACGC 59.882 44.000 0.00 0.00 0.00 5.19
921 2482 5.631512 CAGATACAATAGCTCTTTAGACGCC 59.368 44.000 0.00 0.00 0.00 5.68
922 2483 2.810650 ACAATAGCTCTTTAGACGCCG 58.189 47.619 0.00 0.00 0.00 6.46
923 2484 2.165845 ACAATAGCTCTTTAGACGCCGT 59.834 45.455 0.00 0.00 0.00 5.68
924 2485 2.778187 ATAGCTCTTTAGACGCCGTC 57.222 50.000 9.71 9.71 0.00 4.79
925 2486 1.456296 TAGCTCTTTAGACGCCGTCA 58.544 50.000 20.65 2.51 34.60 4.35
926 2487 0.171455 AGCTCTTTAGACGCCGTCAG 59.829 55.000 20.65 8.38 34.60 3.51
927 2488 0.170561 GCTCTTTAGACGCCGTCAGA 59.829 55.000 20.65 12.39 34.60 3.27
928 2489 1.202313 GCTCTTTAGACGCCGTCAGAT 60.202 52.381 20.65 0.87 34.60 2.90
929 2490 2.722071 CTCTTTAGACGCCGTCAGATC 58.278 52.381 20.65 0.00 34.60 2.75
930 2491 2.356382 CTCTTTAGACGCCGTCAGATCT 59.644 50.000 20.65 0.05 34.60 2.75
931 2492 2.097629 TCTTTAGACGCCGTCAGATCTG 59.902 50.000 20.65 17.07 34.60 2.90
932 2493 0.738975 TTAGACGCCGTCAGATCTGG 59.261 55.000 22.42 8.05 34.60 3.86
933 2494 0.107361 TAGACGCCGTCAGATCTGGA 60.107 55.000 22.42 6.81 34.60 3.86
934 2495 0.965866 AGACGCCGTCAGATCTGGAA 60.966 55.000 22.42 1.00 34.60 3.53
935 2496 0.103208 GACGCCGTCAGATCTGGAAT 59.897 55.000 22.42 2.99 32.09 3.01
936 2497 0.103208 ACGCCGTCAGATCTGGAATC 59.897 55.000 22.42 9.79 0.00 2.52
937 2498 0.598680 CGCCGTCAGATCTGGAATCC 60.599 60.000 22.42 6.99 0.00 3.01
938 2499 0.465705 GCCGTCAGATCTGGAATCCA 59.534 55.000 22.42 0.48 0.00 3.41
939 2500 1.134401 GCCGTCAGATCTGGAATCCAA 60.134 52.381 22.42 0.00 30.80 3.53
940 2501 2.555199 CCGTCAGATCTGGAATCCAAC 58.445 52.381 22.42 10.24 30.80 3.77
941 2502 2.196749 CGTCAGATCTGGAATCCAACG 58.803 52.381 22.42 17.73 30.80 4.10
942 2503 2.555199 GTCAGATCTGGAATCCAACGG 58.445 52.381 22.42 0.00 30.80 4.44
943 2504 1.134401 TCAGATCTGGAATCCAACGGC 60.134 52.381 22.42 0.00 30.80 5.68
944 2505 0.181350 AGATCTGGAATCCAACGGCC 59.819 55.000 2.61 0.00 30.80 6.13
945 2506 1.153168 ATCTGGAATCCAACGGCCG 60.153 57.895 26.86 26.86 30.80 6.13
946 2507 1.622607 ATCTGGAATCCAACGGCCGA 61.623 55.000 35.90 10.13 30.80 5.54
947 2508 1.815421 CTGGAATCCAACGGCCGAG 60.815 63.158 35.90 23.30 30.80 4.63
948 2509 2.238847 CTGGAATCCAACGGCCGAGA 62.239 60.000 35.90 24.79 30.80 4.04
949 2510 1.078708 GGAATCCAACGGCCGAGAA 60.079 57.895 35.90 14.60 0.00 2.87
950 2511 1.090052 GGAATCCAACGGCCGAGAAG 61.090 60.000 35.90 17.31 0.00 2.85
951 2512 0.391263 GAATCCAACGGCCGAGAAGT 60.391 55.000 35.90 16.60 0.00 3.01
952 2513 0.391263 AATCCAACGGCCGAGAAGTC 60.391 55.000 35.90 0.00 0.00 3.01
953 2514 1.258445 ATCCAACGGCCGAGAAGTCT 61.258 55.000 35.90 3.57 0.00 3.24
954 2515 0.609957 TCCAACGGCCGAGAAGTCTA 60.610 55.000 35.90 5.38 0.00 2.59
955 2516 0.460311 CCAACGGCCGAGAAGTCTAT 59.540 55.000 35.90 1.64 0.00 1.98
956 2517 1.679680 CCAACGGCCGAGAAGTCTATA 59.320 52.381 35.90 0.00 0.00 1.31
957 2518 2.296471 CCAACGGCCGAGAAGTCTATAT 59.704 50.000 35.90 0.00 0.00 0.86
958 2519 3.566523 CAACGGCCGAGAAGTCTATATC 58.433 50.000 35.90 0.00 0.00 1.63
959 2520 3.143211 ACGGCCGAGAAGTCTATATCT 57.857 47.619 35.90 0.00 0.00 1.98
960 2521 3.075884 ACGGCCGAGAAGTCTATATCTC 58.924 50.000 35.90 0.00 38.94 2.75
961 2522 2.420722 CGGCCGAGAAGTCTATATCTCC 59.579 54.545 24.07 0.00 39.09 3.71
962 2523 3.692690 GGCCGAGAAGTCTATATCTCCT 58.307 50.000 0.00 0.00 39.09 3.69
963 2524 4.623409 CGGCCGAGAAGTCTATATCTCCTA 60.623 50.000 24.07 0.00 39.09 2.94
964 2525 5.254901 GGCCGAGAAGTCTATATCTCCTAA 58.745 45.833 0.00 0.00 39.09 2.69
965 2526 5.355910 GGCCGAGAAGTCTATATCTCCTAAG 59.644 48.000 0.00 0.00 39.09 2.18
966 2527 5.941647 GCCGAGAAGTCTATATCTCCTAAGT 59.058 44.000 0.00 0.00 39.09 2.24
967 2528 6.431852 GCCGAGAAGTCTATATCTCCTAAGTT 59.568 42.308 0.00 0.00 39.09 2.66
968 2529 7.040271 GCCGAGAAGTCTATATCTCCTAAGTTT 60.040 40.741 0.00 0.00 39.09 2.66
969 2530 8.852135 CCGAGAAGTCTATATCTCCTAAGTTTT 58.148 37.037 0.00 0.00 39.09 2.43
970 2531 9.672086 CGAGAAGTCTATATCTCCTAAGTTTTG 57.328 37.037 0.00 0.00 39.09 2.44
971 2532 9.974980 GAGAAGTCTATATCTCCTAAGTTTTGG 57.025 37.037 0.00 0.00 36.83 3.28
972 2533 8.929487 AGAAGTCTATATCTCCTAAGTTTTGGG 58.071 37.037 0.00 0.00 0.00 4.12
973 2534 8.625467 AAGTCTATATCTCCTAAGTTTTGGGT 57.375 34.615 0.00 0.00 32.34 4.51
974 2535 9.725206 AAGTCTATATCTCCTAAGTTTTGGGTA 57.275 33.333 0.00 0.00 32.34 3.69
975 2536 9.900112 AGTCTATATCTCCTAAGTTTTGGGTAT 57.100 33.333 0.00 0.00 32.34 2.73
977 2538 9.892444 TCTATATCTCCTAAGTTTTGGGTATCA 57.108 33.333 0.00 0.00 32.34 2.15
978 2539 9.930693 CTATATCTCCTAAGTTTTGGGTATCAC 57.069 37.037 0.00 0.00 32.34 3.06
979 2540 6.893020 ATCTCCTAAGTTTTGGGTATCACT 57.107 37.500 0.00 0.00 32.34 3.41
980 2541 6.697641 TCTCCTAAGTTTTGGGTATCACTT 57.302 37.500 0.00 0.00 33.95 3.16
981 2542 6.472887 TCTCCTAAGTTTTGGGTATCACTTG 58.527 40.000 0.00 0.00 31.83 3.16
982 2543 6.271391 TCTCCTAAGTTTTGGGTATCACTTGA 59.729 38.462 0.00 0.00 31.83 3.02
983 2544 6.843752 TCCTAAGTTTTGGGTATCACTTGAA 58.156 36.000 0.00 0.00 31.83 2.69
984 2545 7.291566 TCCTAAGTTTTGGGTATCACTTGAAA 58.708 34.615 0.00 0.00 31.83 2.69
985 2546 7.947890 TCCTAAGTTTTGGGTATCACTTGAAAT 59.052 33.333 0.00 0.00 31.83 2.17
986 2547 8.585018 CCTAAGTTTTGGGTATCACTTGAAATT 58.415 33.333 0.00 0.00 31.83 1.82
987 2548 9.981114 CTAAGTTTTGGGTATCACTTGAAATTT 57.019 29.630 0.00 0.00 31.83 1.82
988 2549 8.887036 AAGTTTTGGGTATCACTTGAAATTTC 57.113 30.769 11.41 11.41 0.00 2.17
989 2550 7.441836 AGTTTTGGGTATCACTTGAAATTTCC 58.558 34.615 15.48 0.00 0.00 3.13
990 2551 5.993748 TTGGGTATCACTTGAAATTTCCC 57.006 39.130 15.48 7.23 0.00 3.97
991 2552 4.349365 TGGGTATCACTTGAAATTTCCCC 58.651 43.478 15.48 14.94 0.00 4.81
1505 3071 1.684049 CAACCTCTCCCCTCGCTCT 60.684 63.158 0.00 0.00 0.00 4.09
1681 3247 0.679002 TCTCTGCTGCCAGCCATTTC 60.679 55.000 15.29 0.00 41.51 2.17
1702 3268 2.560105 CCCCCTCTTCTTTTTGCTGAAG 59.440 50.000 0.00 0.00 40.53 3.02
1722 3288 7.297936 TGAAGTACTCTGTGAATTCTTGGTA 57.702 36.000 7.05 1.04 0.00 3.25
1784 3350 0.537188 ATTGCGTCCAGGAGAACGAT 59.463 50.000 3.37 0.00 0.00 3.73
1868 3434 5.878406 ACATCCCAATAGACTTCAGGTAG 57.122 43.478 0.00 0.00 0.00 3.18
1912 3478 6.814644 TGAATTTGCTAATTCTCAATTGCCTG 59.185 34.615 26.45 0.00 46.40 4.85
1954 3521 5.104693 TCGATTCTTCAGGAGAGTAGAGAGT 60.105 44.000 0.00 0.00 35.37 3.24
1955 3522 6.098552 TCGATTCTTCAGGAGAGTAGAGAGTA 59.901 42.308 0.00 0.00 35.37 2.59
1956 3523 6.423905 CGATTCTTCAGGAGAGTAGAGAGTAG 59.576 46.154 0.00 0.00 35.37 2.57
1957 3524 6.877668 TTCTTCAGGAGAGTAGAGAGTAGA 57.122 41.667 0.00 0.00 35.37 2.59
1958 3525 6.479972 TCTTCAGGAGAGTAGAGAGTAGAG 57.520 45.833 0.00 0.00 0.00 2.43
1959 3526 6.199376 TCTTCAGGAGAGTAGAGAGTAGAGA 58.801 44.000 0.00 0.00 0.00 3.10
1960 3527 6.323996 TCTTCAGGAGAGTAGAGAGTAGAGAG 59.676 46.154 0.00 0.00 0.00 3.20
1961 3528 5.773091 TCAGGAGAGTAGAGAGTAGAGAGA 58.227 45.833 0.00 0.00 0.00 3.10
1962 3529 5.833667 TCAGGAGAGTAGAGAGTAGAGAGAG 59.166 48.000 0.00 0.00 0.00 3.20
2303 4379 1.128809 TCCCCTGCGGTAACAAGGAA 61.129 55.000 0.00 0.00 41.60 3.36
2499 4575 1.961394 AGTAAGCAGTCGTGACCTGAA 59.039 47.619 0.00 0.00 0.00 3.02
2502 4578 1.800805 AGCAGTCGTGACCTGAATTG 58.199 50.000 0.00 0.00 0.00 2.32
2537 4613 1.272490 GCCAGTTCTTTTGGGGCTTAC 59.728 52.381 0.00 0.00 41.39 2.34
2639 4715 9.862371 ACTACTATGATGTTGTATTATGCTAGC 57.138 33.333 8.10 8.10 0.00 3.42
2751 4904 8.489676 TGATCCTTTCTCTCTGATTAAGCTAT 57.510 34.615 0.00 0.00 0.00 2.97
2752 4905 9.593565 TGATCCTTTCTCTCTGATTAAGCTATA 57.406 33.333 0.00 0.00 0.00 1.31
2953 5108 3.753272 CCCGAGATGTTGTGATCAAGTTT 59.247 43.478 0.00 0.00 33.97 2.66
3411 5572 3.118738 AGCAAGGTAAGGTTATCGTCAGG 60.119 47.826 0.00 0.00 0.00 3.86
3415 5576 5.494390 AGGTAAGGTTATCGTCAGGTTTT 57.506 39.130 0.00 0.00 0.00 2.43
3450 5611 7.938140 TCGGAGAAAACATATCTGGATTTTT 57.062 32.000 0.00 0.00 0.00 1.94
3519 6006 4.222810 TGAAGTCAATGCTCTAGCCTAACA 59.777 41.667 0.00 0.00 41.18 2.41
3522 6009 4.938226 AGTCAATGCTCTAGCCTAACAAAC 59.062 41.667 0.00 0.00 41.18 2.93
3575 6063 1.662122 CCATAACGGTAACTTCCACGC 59.338 52.381 0.00 0.00 0.00 5.34
3576 6064 2.613691 CATAACGGTAACTTCCACGCT 58.386 47.619 0.00 0.00 0.00 5.07
3577 6065 2.818130 TAACGGTAACTTCCACGCTT 57.182 45.000 0.00 0.00 0.00 4.68
3578 6066 1.505425 AACGGTAACTTCCACGCTTC 58.495 50.000 0.00 0.00 0.00 3.86
3579 6067 0.320160 ACGGTAACTTCCACGCTTCC 60.320 55.000 0.00 0.00 0.00 3.46
3580 6068 0.320073 CGGTAACTTCCACGCTTCCA 60.320 55.000 0.00 0.00 0.00 3.53
3582 6070 1.439679 GTAACTTCCACGCTTCCAGG 58.560 55.000 0.00 0.00 0.00 4.45
3584 6072 0.250338 AACTTCCACGCTTCCAGGAC 60.250 55.000 0.00 0.00 0.00 3.85
3585 6073 1.122019 ACTTCCACGCTTCCAGGACT 61.122 55.000 0.00 0.00 0.00 3.85
3597 6104 4.452795 GCTTCCAGGACTTTGTTCTAAGAC 59.547 45.833 0.00 0.00 0.00 3.01
3611 6118 2.431057 TCTAAGACGGGATTTGCTCCTC 59.569 50.000 0.00 0.00 44.28 3.71
3636 6143 2.814469 CGATGGAGGGATACTCTTCGGA 60.814 54.545 10.29 0.00 45.83 4.55
3637 6144 2.366640 TGGAGGGATACTCTTCGGAG 57.633 55.000 0.00 0.00 45.83 4.63
3650 6220 0.395312 TTCGGAGTTTGGACCCACTC 59.605 55.000 11.11 11.11 39.04 3.51
3672 6242 8.528643 CACTCGGTATTAAGGTATCCATCATTA 58.471 37.037 0.00 0.00 0.00 1.90
3673 6243 8.750298 ACTCGGTATTAAGGTATCCATCATTAG 58.250 37.037 0.00 0.00 0.00 1.73
3679 6253 7.618019 TTAAGGTATCCATCATTAGCTGACT 57.382 36.000 0.00 0.00 36.48 3.41
3796 6430 4.307032 ACCAGTTGCTTCACAAGGATAT 57.693 40.909 0.00 0.00 39.50 1.63
3814 6448 6.987386 AGGATATCGATAAAAGTCTCACCTG 58.013 40.000 9.61 0.00 0.00 4.00
3815 6449 6.778069 AGGATATCGATAAAAGTCTCACCTGA 59.222 38.462 9.61 0.00 0.00 3.86
3816 6450 7.287927 AGGATATCGATAAAAGTCTCACCTGAA 59.712 37.037 9.61 0.00 0.00 3.02
3835 6469 5.272167 TGAAGTTTTGTTAAGTATCGCGG 57.728 39.130 6.13 0.00 0.00 6.46
3859 6493 3.617669 CAAAGGAACTGTGTACGCAAAG 58.382 45.455 10.85 2.30 39.27 2.77
3932 6566 1.757118 TGTCCAGATCTCATCGAACCC 59.243 52.381 0.00 0.00 0.00 4.11
3951 6585 1.453155 CGCAGGGTCAAATGCTTAGT 58.547 50.000 0.00 0.00 40.34 2.24
3965 6599 9.332502 TCAAATGCTTAGTTGTTAGTAGTTTGA 57.667 29.630 0.00 0.00 0.00 2.69
3974 6608 8.123639 AGTTGTTAGTAGTTTGATAGAGAGCA 57.876 34.615 0.00 0.00 0.00 4.26
3983 6617 4.727507 TTGATAGAGAGCAAGGAGACAC 57.272 45.455 0.00 0.00 0.00 3.67
3985 6619 4.348486 TGATAGAGAGCAAGGAGACACTT 58.652 43.478 0.00 0.00 0.00 3.16
4041 6675 5.852229 CGTATTTTCGAAAATGTTTCGGGAA 59.148 36.000 35.21 16.68 41.78 3.97
4057 6691 2.486548 CGGGAAGTTTCAAGAAGGTCCA 60.487 50.000 0.00 0.00 0.00 4.02
4066 6700 3.686016 TCAAGAAGGTCCAAGTAATGCC 58.314 45.455 0.00 0.00 0.00 4.40
4078 6712 5.010112 TCCAAGTAATGCCGAAAATGTTTCA 59.990 36.000 1.99 0.00 0.00 2.69
4089 6723 4.207019 CGAAAATGTTTCAAAGGTGCTCAC 59.793 41.667 1.99 0.00 0.00 3.51
4090 6724 4.734398 AAATGTTTCAAAGGTGCTCACA 57.266 36.364 2.21 0.00 0.00 3.58
4093 6727 3.351740 TGTTTCAAAGGTGCTCACAGAA 58.648 40.909 2.21 0.00 0.00 3.02
4095 6729 3.281727 TTCAAAGGTGCTCACAGAAGT 57.718 42.857 2.21 0.00 0.00 3.01
4192 6829 1.134220 CGCACCCCCTTCAGCTTATTA 60.134 52.381 0.00 0.00 0.00 0.98
4213 6850 0.536006 GCAAGGAAGTGGAGCTGTGT 60.536 55.000 0.00 0.00 0.00 3.72
4240 6877 3.868062 AGGAAAGGATCTCTAGGGGATG 58.132 50.000 0.00 0.00 0.00 3.51
4247 6884 0.111446 TCTCTAGGGGATGCTCCTCG 59.889 60.000 0.00 0.00 43.53 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.837586 TGCACTTTTAAAATCGATTTGGC 57.162 34.783 23.38 16.83 32.27 4.52
69 1478 9.787532 CTGAGAGATTGTTTAACAAAAACTTCA 57.212 29.630 14.70 12.78 41.96 3.02
127 1536 8.268878 ACCATATAGAGCTTTCTGAGGTTTAT 57.731 34.615 0.00 0.00 37.11 1.40
136 1545 7.366847 TGCTTAAGACCATATAGAGCTTTCT 57.633 36.000 6.67 0.00 0.00 2.52
137 1546 7.713073 AGTTGCTTAAGACCATATAGAGCTTTC 59.287 37.037 6.67 0.00 0.00 2.62
181 1594 6.536224 CCTGCTTCAAAAGAAACTTTGTTGAT 59.464 34.615 0.00 0.00 37.52 2.57
228 1641 2.163509 GGGAAGGCTTCAGTCCTTTTC 58.836 52.381 27.17 7.59 43.54 2.29
233 1646 1.002011 GGTGGGAAGGCTTCAGTCC 60.002 63.158 27.17 19.38 0.00 3.85
235 1648 0.329596 GATGGTGGGAAGGCTTCAGT 59.670 55.000 27.17 7.19 0.00 3.41
236 1649 0.622665 AGATGGTGGGAAGGCTTCAG 59.377 55.000 27.17 0.00 0.00 3.02
240 1653 1.008938 AGTCTAGATGGTGGGAAGGCT 59.991 52.381 0.00 0.00 0.00 4.58
259 1673 3.872511 TTGCAAATACCATGCCTTGAG 57.127 42.857 0.00 0.00 43.16 3.02
276 1691 4.990426 ACTGGTGCAACAAATCTAAATTGC 59.010 37.500 5.64 0.94 46.08 3.56
277 1692 8.761575 ATAACTGGTGCAACAAATCTAAATTG 57.238 30.769 5.64 0.00 39.98 2.32
298 1713 9.219497 GTTGTAAGTGATCTCGTACAGTATAAC 57.781 37.037 18.42 12.37 34.85 1.89
309 1724 6.241207 ACAAAATGGTTGTAAGTGATCTCG 57.759 37.500 0.00 0.00 0.00 4.04
352 1770 9.541884 ACCCAAATAATTTACCATAAACTCACT 57.458 29.630 0.00 0.00 0.00 3.41
354 1772 8.254508 GCACCCAAATAATTTACCATAAACTCA 58.745 33.333 0.00 0.00 0.00 3.41
355 1773 7.709182 GGCACCCAAATAATTTACCATAAACTC 59.291 37.037 0.00 0.00 0.00 3.01
356 1774 7.181125 TGGCACCCAAATAATTTACCATAAACT 59.819 33.333 0.00 0.00 0.00 2.66
357 1775 7.331791 TGGCACCCAAATAATTTACCATAAAC 58.668 34.615 0.00 0.00 0.00 2.01
358 1776 7.496346 TGGCACCCAAATAATTTACCATAAA 57.504 32.000 0.00 0.00 0.00 1.40
359 1777 7.181125 ACTTGGCACCCAAATAATTTACCATAA 59.819 33.333 0.00 0.00 43.44 1.90
360 1778 6.670027 ACTTGGCACCCAAATAATTTACCATA 59.330 34.615 0.00 0.00 43.44 2.74
361 1779 5.487131 ACTTGGCACCCAAATAATTTACCAT 59.513 36.000 0.00 0.00 43.44 3.55
362 1780 4.841246 ACTTGGCACCCAAATAATTTACCA 59.159 37.500 0.00 0.00 43.44 3.25
363 1781 5.414789 ACTTGGCACCCAAATAATTTACC 57.585 39.130 0.00 0.00 43.44 2.85
364 1782 8.878769 CATAAACTTGGCACCCAAATAATTTAC 58.121 33.333 0.00 0.00 43.44 2.01
365 1783 8.598041 ACATAAACTTGGCACCCAAATAATTTA 58.402 29.630 0.00 2.74 43.44 1.40
366 1784 7.457561 ACATAAACTTGGCACCCAAATAATTT 58.542 30.769 0.00 0.88 43.44 1.82
367 1785 7.014988 ACATAAACTTGGCACCCAAATAATT 57.985 32.000 0.00 0.00 43.44 1.40
368 1786 6.619329 ACATAAACTTGGCACCCAAATAAT 57.381 33.333 0.00 0.00 43.44 1.28
369 1787 6.426646 AACATAAACTTGGCACCCAAATAA 57.573 33.333 0.00 0.00 43.44 1.40
370 1788 6.426646 AAACATAAACTTGGCACCCAAATA 57.573 33.333 0.00 0.00 43.44 1.40
371 1789 4.972751 AACATAAACTTGGCACCCAAAT 57.027 36.364 0.00 0.00 43.44 2.32
372 1790 4.762289 AAACATAAACTTGGCACCCAAA 57.238 36.364 0.00 0.00 43.44 3.28
373 1791 6.426646 AATAAACATAAACTTGGCACCCAA 57.573 33.333 0.00 0.00 41.69 4.12
374 1792 7.726033 ATAATAAACATAAACTTGGCACCCA 57.274 32.000 0.00 0.00 0.00 4.51
375 1793 9.908152 GATATAATAAACATAAACTTGGCACCC 57.092 33.333 0.00 0.00 0.00 4.61
409 1827 4.155310 CCAAAACGATGGTTAGTGGAAC 57.845 45.455 14.55 0.00 41.02 3.62
419 1837 6.435430 TTCATATTCTCACCAAAACGATGG 57.565 37.500 0.00 0.00 46.38 3.51
420 1838 8.023128 ACTTTTCATATTCTCACCAAAACGATG 58.977 33.333 0.00 0.00 0.00 3.84
421 1839 8.110860 ACTTTTCATATTCTCACCAAAACGAT 57.889 30.769 0.00 0.00 0.00 3.73
422 1840 7.504924 ACTTTTCATATTCTCACCAAAACGA 57.495 32.000 0.00 0.00 0.00 3.85
423 1841 9.672086 TTAACTTTTCATATTCTCACCAAAACG 57.328 29.630 0.00 0.00 0.00 3.60
429 1847 9.869844 CGATGATTAACTTTTCATATTCTCACC 57.130 33.333 0.00 0.00 32.84 4.02
435 1853 8.778358 GCCTCTCGATGATTAACTTTTCATATT 58.222 33.333 0.00 0.00 32.84 1.28
436 1854 7.933577 TGCCTCTCGATGATTAACTTTTCATAT 59.066 33.333 0.00 0.00 32.84 1.78
437 1855 7.224753 GTGCCTCTCGATGATTAACTTTTCATA 59.775 37.037 0.00 0.00 32.84 2.15
438 1856 6.037610 GTGCCTCTCGATGATTAACTTTTCAT 59.962 38.462 0.00 0.00 35.33 2.57
439 1857 5.351465 GTGCCTCTCGATGATTAACTTTTCA 59.649 40.000 0.00 0.00 0.00 2.69
440 1858 5.351465 TGTGCCTCTCGATGATTAACTTTTC 59.649 40.000 0.00 0.00 0.00 2.29
441 1859 5.245531 TGTGCCTCTCGATGATTAACTTTT 58.754 37.500 0.00 0.00 0.00 2.27
442 1860 4.832248 TGTGCCTCTCGATGATTAACTTT 58.168 39.130 0.00 0.00 0.00 2.66
443 1861 4.471904 TGTGCCTCTCGATGATTAACTT 57.528 40.909 0.00 0.00 0.00 2.66
444 1862 4.081420 ACTTGTGCCTCTCGATGATTAACT 60.081 41.667 0.00 0.00 0.00 2.24
445 1863 4.184629 ACTTGTGCCTCTCGATGATTAAC 58.815 43.478 0.00 0.00 0.00 2.01
446 1864 4.471904 ACTTGTGCCTCTCGATGATTAA 57.528 40.909 0.00 0.00 0.00 1.40
447 1865 4.471904 AACTTGTGCCTCTCGATGATTA 57.528 40.909 0.00 0.00 0.00 1.75
448 1866 3.340814 AACTTGTGCCTCTCGATGATT 57.659 42.857 0.00 0.00 0.00 2.57
449 1867 4.100035 TGATAACTTGTGCCTCTCGATGAT 59.900 41.667 0.00 0.00 0.00 2.45
450 1868 3.447229 TGATAACTTGTGCCTCTCGATGA 59.553 43.478 0.00 0.00 0.00 2.92
451 1869 3.785486 TGATAACTTGTGCCTCTCGATG 58.215 45.455 0.00 0.00 0.00 3.84
452 1870 4.471904 TTGATAACTTGTGCCTCTCGAT 57.528 40.909 0.00 0.00 0.00 3.59
453 1871 3.953712 TTGATAACTTGTGCCTCTCGA 57.046 42.857 0.00 0.00 0.00 4.04
454 1872 4.033358 GTCATTGATAACTTGTGCCTCTCG 59.967 45.833 0.00 0.00 0.00 4.04
455 1873 4.033358 CGTCATTGATAACTTGTGCCTCTC 59.967 45.833 0.00 0.00 0.00 3.20
456 1874 3.935203 CGTCATTGATAACTTGTGCCTCT 59.065 43.478 0.00 0.00 0.00 3.69
457 1875 3.063997 CCGTCATTGATAACTTGTGCCTC 59.936 47.826 0.00 0.00 0.00 4.70
458 1876 3.009723 CCGTCATTGATAACTTGTGCCT 58.990 45.455 0.00 0.00 0.00 4.75
459 1877 3.006940 TCCGTCATTGATAACTTGTGCC 58.993 45.455 0.00 0.00 0.00 5.01
460 1878 3.483574 CGTCCGTCATTGATAACTTGTGC 60.484 47.826 0.00 0.00 0.00 4.57
461 1879 3.924073 TCGTCCGTCATTGATAACTTGTG 59.076 43.478 0.00 0.00 0.00 3.33
462 1880 4.174009 CTCGTCCGTCATTGATAACTTGT 58.826 43.478 0.00 0.00 0.00 3.16
463 1881 3.000322 GCTCGTCCGTCATTGATAACTTG 60.000 47.826 0.00 0.00 0.00 3.16
464 1882 3.119101 AGCTCGTCCGTCATTGATAACTT 60.119 43.478 0.00 0.00 0.00 2.66
465 1883 2.427453 AGCTCGTCCGTCATTGATAACT 59.573 45.455 0.00 0.00 0.00 2.24
466 1884 2.535984 CAGCTCGTCCGTCATTGATAAC 59.464 50.000 0.00 0.00 0.00 1.89
467 1885 2.481276 CCAGCTCGTCCGTCATTGATAA 60.481 50.000 0.00 0.00 0.00 1.75
468 1886 1.067060 CCAGCTCGTCCGTCATTGATA 59.933 52.381 0.00 0.00 0.00 2.15
469 1887 0.179100 CCAGCTCGTCCGTCATTGAT 60.179 55.000 0.00 0.00 0.00 2.57
470 1888 1.215382 CCAGCTCGTCCGTCATTGA 59.785 57.895 0.00 0.00 0.00 2.57
471 1889 1.811266 CCCAGCTCGTCCGTCATTG 60.811 63.158 0.00 0.00 0.00 2.82
472 1890 1.330655 ATCCCAGCTCGTCCGTCATT 61.331 55.000 0.00 0.00 0.00 2.57
473 1891 1.330655 AATCCCAGCTCGTCCGTCAT 61.331 55.000 0.00 0.00 0.00 3.06
474 1892 1.945354 GAATCCCAGCTCGTCCGTCA 61.945 60.000 0.00 0.00 0.00 4.35
475 1893 1.227002 GAATCCCAGCTCGTCCGTC 60.227 63.158 0.00 0.00 0.00 4.79
476 1894 1.258445 AAGAATCCCAGCTCGTCCGT 61.258 55.000 0.00 0.00 0.00 4.69
477 1895 0.108138 AAAGAATCCCAGCTCGTCCG 60.108 55.000 0.00 0.00 0.00 4.79
478 1896 1.208293 AGAAAGAATCCCAGCTCGTCC 59.792 52.381 0.00 0.00 0.00 4.79
479 1897 2.093973 TGAGAAAGAATCCCAGCTCGTC 60.094 50.000 0.00 0.00 0.00 4.20
480 1898 1.902508 TGAGAAAGAATCCCAGCTCGT 59.097 47.619 0.00 0.00 0.00 4.18
481 1899 2.680312 TGAGAAAGAATCCCAGCTCG 57.320 50.000 0.00 0.00 0.00 5.03
482 1900 4.779696 AGATTGAGAAAGAATCCCAGCTC 58.220 43.478 0.00 0.00 31.22 4.09
483 1901 4.385088 GGAGATTGAGAAAGAATCCCAGCT 60.385 45.833 0.00 0.00 31.22 4.24
484 1902 3.882288 GGAGATTGAGAAAGAATCCCAGC 59.118 47.826 0.00 0.00 31.22 4.85
485 1903 5.108187 TGGAGATTGAGAAAGAATCCCAG 57.892 43.478 0.00 0.00 31.73 4.45
486 1904 5.519183 TTGGAGATTGAGAAAGAATCCCA 57.481 39.130 0.00 0.00 32.67 4.37
487 1905 8.525290 TTAATTGGAGATTGAGAAAGAATCCC 57.475 34.615 0.00 0.00 31.22 3.85
488 1906 9.794685 GTTTAATTGGAGATTGAGAAAGAATCC 57.205 33.333 0.00 0.00 31.22 3.01
493 1911 9.415544 CCTTTGTTTAATTGGAGATTGAGAAAG 57.584 33.333 0.00 0.00 0.00 2.62
494 1912 9.142014 TCCTTTGTTTAATTGGAGATTGAGAAA 57.858 29.630 0.00 0.00 0.00 2.52
495 1913 8.704849 TCCTTTGTTTAATTGGAGATTGAGAA 57.295 30.769 0.00 0.00 0.00 2.87
496 1914 8.704849 TTCCTTTGTTTAATTGGAGATTGAGA 57.295 30.769 0.00 0.00 0.00 3.27
497 1915 8.031277 CCTTCCTTTGTTTAATTGGAGATTGAG 58.969 37.037 0.00 0.00 0.00 3.02
498 1916 7.728083 TCCTTCCTTTGTTTAATTGGAGATTGA 59.272 33.333 0.00 0.00 0.00 2.57
499 1917 7.895759 TCCTTCCTTTGTTTAATTGGAGATTG 58.104 34.615 0.00 0.00 0.00 2.67
500 1918 8.367911 GTTCCTTCCTTTGTTTAATTGGAGATT 58.632 33.333 0.00 0.00 0.00 2.40
501 1919 7.508977 TGTTCCTTCCTTTGTTTAATTGGAGAT 59.491 33.333 0.00 0.00 0.00 2.75
502 1920 6.836527 TGTTCCTTCCTTTGTTTAATTGGAGA 59.163 34.615 0.00 0.00 0.00 3.71
503 1921 6.923508 GTGTTCCTTCCTTTGTTTAATTGGAG 59.076 38.462 0.00 0.00 0.00 3.86
504 1922 6.381420 TGTGTTCCTTCCTTTGTTTAATTGGA 59.619 34.615 0.00 0.00 0.00 3.53
505 1923 6.478673 GTGTGTTCCTTCCTTTGTTTAATTGG 59.521 38.462 0.00 0.00 0.00 3.16
506 1924 7.264947 AGTGTGTTCCTTCCTTTGTTTAATTG 58.735 34.615 0.00 0.00 0.00 2.32
507 1925 7.418337 AGTGTGTTCCTTCCTTTGTTTAATT 57.582 32.000 0.00 0.00 0.00 1.40
508 1926 7.418337 AAGTGTGTTCCTTCCTTTGTTTAAT 57.582 32.000 0.00 0.00 0.00 1.40
509 1927 6.844097 AAGTGTGTTCCTTCCTTTGTTTAA 57.156 33.333 0.00 0.00 0.00 1.52
510 1928 6.844097 AAAGTGTGTTCCTTCCTTTGTTTA 57.156 33.333 0.00 0.00 0.00 2.01
511 1929 5.738619 AAAGTGTGTTCCTTCCTTTGTTT 57.261 34.783 0.00 0.00 0.00 2.83
512 1930 5.011635 ACAAAAGTGTGTTCCTTCCTTTGTT 59.988 36.000 0.00 0.00 36.31 2.83
513 1931 4.526650 ACAAAAGTGTGTTCCTTCCTTTGT 59.473 37.500 0.00 0.00 36.31 2.83
514 1932 5.072040 ACAAAAGTGTGTTCCTTCCTTTG 57.928 39.130 0.00 0.00 36.31 2.77
583 2014 8.001881 TGGGTTCGTATATATGTTTTGCATTT 57.998 30.769 1.91 0.00 38.94 2.32
593 2024 7.444183 AGGTTGACATTTGGGTTCGTATATATG 59.556 37.037 0.00 0.00 0.00 1.78
596 2027 5.751586 AGGTTGACATTTGGGTTCGTATAT 58.248 37.500 0.00 0.00 0.00 0.86
601 2032 2.621055 TCAAGGTTGACATTTGGGTTCG 59.379 45.455 0.00 0.00 31.01 3.95
617 2048 3.378112 TGCAACTGTTTTCTCAGTCAAGG 59.622 43.478 0.00 0.00 46.25 3.61
635 2196 2.790433 GGTGGTAGGTTTGATCTGCAA 58.210 47.619 0.00 0.00 33.88 4.08
647 2208 0.752743 TATGGGACGACGGTGGTAGG 60.753 60.000 0.00 0.00 0.00 3.18
671 2232 8.880750 GTTTACGGCTTAGATTAGAAATGTCTT 58.119 33.333 0.00 0.00 35.12 3.01
676 2237 7.230466 CGTGTTTACGGCTTAGATTAGAAAT 57.770 36.000 0.00 0.00 46.23 2.17
697 2258 7.543756 ACCAAATTCCCTCAATATAAAACGTG 58.456 34.615 0.00 0.00 0.00 4.49
699 2260 8.349983 CCTACCAAATTCCCTCAATATAAAACG 58.650 37.037 0.00 0.00 0.00 3.60
710 2271 5.163550 GCAAATGTACCTACCAAATTCCCTC 60.164 44.000 0.00 0.00 0.00 4.30
720 2281 5.102313 GCTTTCATTGCAAATGTACCTACC 58.898 41.667 1.71 0.00 0.00 3.18
752 2313 0.976073 ACCTGATACCACCACCGAGG 60.976 60.000 0.00 0.00 45.67 4.63
753 2314 0.175760 CACCTGATACCACCACCGAG 59.824 60.000 0.00 0.00 0.00 4.63
754 2315 0.251877 TCACCTGATACCACCACCGA 60.252 55.000 0.00 0.00 0.00 4.69
755 2316 0.830648 ATCACCTGATACCACCACCG 59.169 55.000 0.00 0.00 32.01 4.94
756 2317 3.470645 GTATCACCTGATACCACCACC 57.529 52.381 12.68 0.00 46.87 4.61
764 2325 7.181305 TCACTTAAACCTTGGTATCACCTGATA 59.819 37.037 0.00 0.00 39.58 2.15
765 2326 6.012858 TCACTTAAACCTTGGTATCACCTGAT 60.013 38.462 0.00 0.00 39.58 2.90
766 2327 5.308497 TCACTTAAACCTTGGTATCACCTGA 59.692 40.000 0.00 0.00 39.58 3.86
767 2328 5.556915 TCACTTAAACCTTGGTATCACCTG 58.443 41.667 0.00 0.00 39.58 4.00
768 2329 5.836024 TCACTTAAACCTTGGTATCACCT 57.164 39.130 0.00 0.00 39.58 4.00
769 2330 6.541278 GGTATCACTTAAACCTTGGTATCACC 59.459 42.308 0.00 0.00 39.22 4.02
770 2331 7.107542 TGGTATCACTTAAACCTTGGTATCAC 58.892 38.462 0.00 0.00 34.23 3.06
771 2332 7.260387 TGGTATCACTTAAACCTTGGTATCA 57.740 36.000 0.00 0.00 34.23 2.15
772 2333 7.990886 TCATGGTATCACTTAAACCTTGGTATC 59.009 37.037 8.50 0.00 38.39 2.24
773 2334 7.867921 TCATGGTATCACTTAAACCTTGGTAT 58.132 34.615 8.50 0.00 38.39 2.73
774 2335 7.260387 TCATGGTATCACTTAAACCTTGGTA 57.740 36.000 8.50 0.00 38.39 3.25
775 2336 6.134535 TCATGGTATCACTTAAACCTTGGT 57.865 37.500 8.50 0.00 38.39 3.67
776 2337 7.042051 CGTATCATGGTATCACTTAAACCTTGG 60.042 40.741 8.50 0.00 38.39 3.61
777 2338 7.042051 CCGTATCATGGTATCACTTAAACCTTG 60.042 40.741 0.00 3.77 38.91 3.61
778 2339 6.990349 CCGTATCATGGTATCACTTAAACCTT 59.010 38.462 0.00 0.00 34.23 3.50
779 2340 6.463897 CCCGTATCATGGTATCACTTAAACCT 60.464 42.308 0.00 0.00 34.23 3.50
780 2341 5.699458 CCCGTATCATGGTATCACTTAAACC 59.301 44.000 0.00 0.00 0.00 3.27
781 2342 5.178809 GCCCGTATCATGGTATCACTTAAAC 59.821 44.000 0.00 0.00 0.00 2.01
782 2343 5.071250 AGCCCGTATCATGGTATCACTTAAA 59.929 40.000 0.00 0.00 0.00 1.52
783 2344 4.591498 AGCCCGTATCATGGTATCACTTAA 59.409 41.667 0.00 0.00 0.00 1.85
784 2345 4.157246 AGCCCGTATCATGGTATCACTTA 58.843 43.478 0.00 0.00 0.00 2.24
785 2346 2.972713 AGCCCGTATCATGGTATCACTT 59.027 45.455 0.00 0.00 0.00 3.16
786 2347 2.609747 AGCCCGTATCATGGTATCACT 58.390 47.619 0.00 0.00 0.00 3.41
787 2348 3.326747 GAAGCCCGTATCATGGTATCAC 58.673 50.000 0.00 0.00 0.00 3.06
788 2349 2.301870 GGAAGCCCGTATCATGGTATCA 59.698 50.000 0.00 0.00 0.00 2.15
789 2350 2.973945 GGAAGCCCGTATCATGGTATC 58.026 52.381 0.00 0.00 0.00 2.24
804 2365 4.821589 CCCACGGCTCTCGGAAGC 62.822 72.222 1.80 1.80 44.45 3.86
805 2366 2.356818 GATCCCACGGCTCTCGGAAG 62.357 65.000 0.00 0.00 44.45 3.46
806 2367 2.363795 ATCCCACGGCTCTCGGAA 60.364 61.111 0.00 0.00 44.45 4.30
807 2368 2.833582 GATCCCACGGCTCTCGGA 60.834 66.667 0.00 0.00 44.45 4.55
808 2369 2.835431 AGATCCCACGGCTCTCGG 60.835 66.667 0.00 0.00 44.45 4.63
809 2370 2.069465 CTGAGATCCCACGGCTCTCG 62.069 65.000 6.97 0.00 45.88 4.04
810 2371 0.753479 TCTGAGATCCCACGGCTCTC 60.753 60.000 4.87 4.87 36.72 3.20
811 2372 0.105760 ATCTGAGATCCCACGGCTCT 60.106 55.000 0.00 0.00 0.00 4.09
812 2373 0.316841 GATCTGAGATCCCACGGCTC 59.683 60.000 11.36 0.00 0.00 4.70
813 2374 0.105760 AGATCTGAGATCCCACGGCT 60.106 55.000 18.29 0.00 0.00 5.52
814 2375 0.033228 CAGATCTGAGATCCCACGGC 59.967 60.000 18.34 0.00 0.00 5.68
815 2376 1.697284 TCAGATCTGAGATCCCACGG 58.303 55.000 21.67 4.44 34.14 4.94
816 2377 2.029200 CCATCAGATCTGAGATCCCACG 60.029 54.545 28.26 10.29 43.61 4.94
817 2378 2.289569 GCCATCAGATCTGAGATCCCAC 60.290 54.545 28.26 11.17 43.61 4.61
818 2379 1.976404 GCCATCAGATCTGAGATCCCA 59.024 52.381 28.26 6.04 43.61 4.37
819 2380 2.259012 AGCCATCAGATCTGAGATCCC 58.741 52.381 28.26 15.14 43.61 3.85
820 2381 3.195396 GGTAGCCATCAGATCTGAGATCC 59.805 52.174 28.26 19.22 43.61 3.36
821 2382 3.119531 CGGTAGCCATCAGATCTGAGATC 60.120 52.174 28.26 14.47 43.61 2.75
822 2383 2.824936 CGGTAGCCATCAGATCTGAGAT 59.175 50.000 28.26 17.76 43.61 2.75
823 2384 2.234143 CGGTAGCCATCAGATCTGAGA 58.766 52.381 28.26 9.04 43.61 3.27
824 2385 1.336702 GCGGTAGCCATCAGATCTGAG 60.337 57.143 28.26 17.73 39.25 3.35
825 2386 0.676184 GCGGTAGCCATCAGATCTGA 59.324 55.000 27.03 27.03 39.83 3.27
826 2387 0.390492 TGCGGTAGCCATCAGATCTG 59.610 55.000 17.07 17.07 44.33 2.90
827 2388 1.069823 CTTGCGGTAGCCATCAGATCT 59.930 52.381 0.00 0.00 44.33 2.75
828 2389 1.506493 CTTGCGGTAGCCATCAGATC 58.494 55.000 0.00 0.00 44.33 2.75
829 2390 0.533755 GCTTGCGGTAGCCATCAGAT 60.534 55.000 0.00 0.00 44.33 2.90
830 2391 1.153369 GCTTGCGGTAGCCATCAGA 60.153 57.895 0.00 0.00 44.33 3.27
831 2392 0.745845 AAGCTTGCGGTAGCCATCAG 60.746 55.000 0.00 0.00 42.20 2.90
832 2393 0.322456 AAAGCTTGCGGTAGCCATCA 60.322 50.000 0.00 0.00 42.20 3.07
833 2394 0.811281 AAAAGCTTGCGGTAGCCATC 59.189 50.000 0.00 0.00 42.20 3.51
834 2395 0.527565 CAAAAGCTTGCGGTAGCCAT 59.472 50.000 0.00 0.00 42.20 4.40
835 2396 0.536233 TCAAAAGCTTGCGGTAGCCA 60.536 50.000 0.00 0.00 42.20 4.75
836 2397 0.596082 TTCAAAAGCTTGCGGTAGCC 59.404 50.000 0.00 0.00 42.20 3.93
837 2398 1.001815 TGTTCAAAAGCTTGCGGTAGC 60.002 47.619 0.00 0.00 45.41 3.58
838 2399 3.559238 ATGTTCAAAAGCTTGCGGTAG 57.441 42.857 0.00 0.00 32.14 3.18
839 2400 4.314740 AAATGTTCAAAAGCTTGCGGTA 57.685 36.364 0.00 0.00 32.14 4.02
840 2401 2.888834 AATGTTCAAAAGCTTGCGGT 57.111 40.000 0.00 0.00 32.14 5.68
841 2402 3.845662 GCAAAATGTTCAAAAGCTTGCGG 60.846 43.478 0.00 0.00 32.14 5.69
842 2403 3.242349 TGCAAAATGTTCAAAAGCTTGCG 60.242 39.130 0.00 0.00 40.35 4.85
843 2404 4.275838 TGCAAAATGTTCAAAAGCTTGC 57.724 36.364 0.00 0.00 38.48 4.01
844 2405 7.438701 GTTTTTGCAAAATGTTCAAAAGCTTG 58.561 30.769 24.39 0.00 39.75 4.01
845 2406 6.305160 CGTTTTTGCAAAATGTTCAAAAGCTT 59.695 30.769 24.39 0.00 39.75 3.74
846 2407 5.794448 CGTTTTTGCAAAATGTTCAAAAGCT 59.206 32.000 24.39 0.00 39.75 3.74
847 2408 5.496813 GCGTTTTTGCAAAATGTTCAAAAGC 60.497 36.000 24.39 16.72 39.75 3.51
848 2409 5.003308 GGCGTTTTTGCAAAATGTTCAAAAG 59.997 36.000 24.39 11.38 39.75 2.27
849 2410 4.853743 GGCGTTTTTGCAAAATGTTCAAAA 59.146 33.333 24.39 5.05 37.75 2.44
850 2411 4.083324 TGGCGTTTTTGCAAAATGTTCAAA 60.083 33.333 24.39 5.80 36.28 2.69
851 2412 3.436704 TGGCGTTTTTGCAAAATGTTCAA 59.563 34.783 24.39 6.54 36.28 2.69
852 2413 3.002791 TGGCGTTTTTGCAAAATGTTCA 58.997 36.364 24.39 16.91 36.28 3.18
853 2414 3.665173 TGGCGTTTTTGCAAAATGTTC 57.335 38.095 24.39 14.84 36.28 3.18
854 2415 3.426829 GGTTGGCGTTTTTGCAAAATGTT 60.427 39.130 24.39 0.00 36.28 2.71
855 2416 2.096657 GGTTGGCGTTTTTGCAAAATGT 59.903 40.909 24.39 0.00 36.28 2.71
856 2417 2.714139 GGTTGGCGTTTTTGCAAAATG 58.286 42.857 24.39 19.76 36.28 2.32
857 2418 1.328986 CGGTTGGCGTTTTTGCAAAAT 59.671 42.857 24.39 0.00 36.28 1.82
858 2419 0.721718 CGGTTGGCGTTTTTGCAAAA 59.278 45.000 20.46 20.46 36.28 2.44
859 2420 1.084370 CCGGTTGGCGTTTTTGCAAA 61.084 50.000 8.05 8.05 36.28 3.68
860 2421 1.519455 CCGGTTGGCGTTTTTGCAA 60.519 52.632 0.00 0.00 36.28 4.08
861 2422 1.945354 TTCCGGTTGGCGTTTTTGCA 61.945 50.000 0.00 0.00 36.28 4.08
862 2423 1.212455 CTTCCGGTTGGCGTTTTTGC 61.212 55.000 0.00 0.00 34.14 3.68
863 2424 0.101579 ACTTCCGGTTGGCGTTTTTG 59.898 50.000 0.00 0.00 34.14 2.44
864 2425 0.382873 GACTTCCGGTTGGCGTTTTT 59.617 50.000 0.00 0.00 34.14 1.94
865 2426 0.464916 AGACTTCCGGTTGGCGTTTT 60.465 50.000 0.00 0.00 34.14 2.43
866 2427 0.464916 AAGACTTCCGGTTGGCGTTT 60.465 50.000 0.00 0.00 34.14 3.60
867 2428 0.393820 TAAGACTTCCGGTTGGCGTT 59.606 50.000 0.00 0.00 34.14 4.84
868 2429 0.393820 TTAAGACTTCCGGTTGGCGT 59.606 50.000 0.00 0.00 34.14 5.68
869 2430 1.515081 TTTAAGACTTCCGGTTGGCG 58.485 50.000 0.00 0.00 34.14 5.69
870 2431 4.514781 AATTTTAAGACTTCCGGTTGGC 57.485 40.909 0.00 0.00 34.14 4.52
871 2432 5.179929 ACGTAATTTTAAGACTTCCGGTTGG 59.820 40.000 0.00 0.00 0.00 3.77
872 2433 6.075280 CACGTAATTTTAAGACTTCCGGTTG 58.925 40.000 0.00 0.00 0.00 3.77
873 2434 5.334337 GCACGTAATTTTAAGACTTCCGGTT 60.334 40.000 0.00 0.00 0.00 4.44
874 2435 4.152938 GCACGTAATTTTAAGACTTCCGGT 59.847 41.667 0.00 0.00 0.00 5.28
875 2436 4.152759 TGCACGTAATTTTAAGACTTCCGG 59.847 41.667 0.00 0.00 0.00 5.14
876 2437 5.119588 TCTGCACGTAATTTTAAGACTTCCG 59.880 40.000 0.00 0.00 0.00 4.30
877 2438 6.476243 TCTGCACGTAATTTTAAGACTTCC 57.524 37.500 0.00 0.00 0.00 3.46
878 2439 8.653338 TGTATCTGCACGTAATTTTAAGACTTC 58.347 33.333 0.00 0.00 0.00 3.01
879 2440 8.542497 TGTATCTGCACGTAATTTTAAGACTT 57.458 30.769 0.00 0.00 0.00 3.01
880 2441 8.542497 TTGTATCTGCACGTAATTTTAAGACT 57.458 30.769 0.00 0.00 0.00 3.24
883 2444 9.370126 GCTATTGTATCTGCACGTAATTTTAAG 57.630 33.333 0.00 0.00 0.00 1.85
884 2445 9.104965 AGCTATTGTATCTGCACGTAATTTTAA 57.895 29.630 0.00 0.00 0.00 1.52
885 2446 8.657074 AGCTATTGTATCTGCACGTAATTTTA 57.343 30.769 0.00 0.00 0.00 1.52
886 2447 7.495934 AGAGCTATTGTATCTGCACGTAATTTT 59.504 33.333 0.00 0.00 0.00 1.82
887 2448 6.986817 AGAGCTATTGTATCTGCACGTAATTT 59.013 34.615 0.00 0.00 0.00 1.82
888 2449 6.516718 AGAGCTATTGTATCTGCACGTAATT 58.483 36.000 0.00 0.00 0.00 1.40
889 2450 6.090483 AGAGCTATTGTATCTGCACGTAAT 57.910 37.500 0.00 0.00 0.00 1.89
890 2451 5.515797 AGAGCTATTGTATCTGCACGTAA 57.484 39.130 0.00 0.00 0.00 3.18
891 2452 5.515797 AAGAGCTATTGTATCTGCACGTA 57.484 39.130 0.00 0.00 0.00 3.57
892 2453 4.392921 AAGAGCTATTGTATCTGCACGT 57.607 40.909 0.00 0.00 0.00 4.49
893 2454 6.143118 GTCTAAAGAGCTATTGTATCTGCACG 59.857 42.308 0.00 0.00 0.00 5.34
894 2455 6.143118 CGTCTAAAGAGCTATTGTATCTGCAC 59.857 42.308 0.00 0.00 0.00 4.57
895 2456 6.209361 CGTCTAAAGAGCTATTGTATCTGCA 58.791 40.000 0.00 0.00 0.00 4.41
896 2457 5.117897 GCGTCTAAAGAGCTATTGTATCTGC 59.882 44.000 0.00 0.00 0.00 4.26
897 2458 5.631512 GGCGTCTAAAGAGCTATTGTATCTG 59.368 44.000 0.00 0.00 0.00 2.90
898 2459 5.563085 CGGCGTCTAAAGAGCTATTGTATCT 60.563 44.000 0.00 0.00 0.00 1.98
899 2460 4.617645 CGGCGTCTAAAGAGCTATTGTATC 59.382 45.833 0.00 0.00 0.00 2.24
900 2461 4.037684 ACGGCGTCTAAAGAGCTATTGTAT 59.962 41.667 6.77 0.00 0.00 2.29
901 2462 3.379372 ACGGCGTCTAAAGAGCTATTGTA 59.621 43.478 6.77 0.00 0.00 2.41
902 2463 2.165845 ACGGCGTCTAAAGAGCTATTGT 59.834 45.455 6.77 0.00 0.00 2.71
903 2464 2.789893 GACGGCGTCTAAAGAGCTATTG 59.210 50.000 31.15 0.00 0.00 1.90
904 2465 2.426024 TGACGGCGTCTAAAGAGCTATT 59.574 45.455 36.17 0.00 33.15 1.73
905 2466 2.022195 TGACGGCGTCTAAAGAGCTAT 58.978 47.619 36.17 0.00 33.15 2.97
906 2467 1.400846 CTGACGGCGTCTAAAGAGCTA 59.599 52.381 36.17 15.17 33.15 3.32
907 2468 0.171455 CTGACGGCGTCTAAAGAGCT 59.829 55.000 36.17 0.00 33.15 4.09
908 2469 0.170561 TCTGACGGCGTCTAAAGAGC 59.829 55.000 36.17 12.57 33.15 4.09
909 2470 2.356382 AGATCTGACGGCGTCTAAAGAG 59.644 50.000 36.17 25.64 33.15 2.85
910 2471 2.097629 CAGATCTGACGGCGTCTAAAGA 59.902 50.000 36.17 30.01 33.15 2.52
911 2472 2.455032 CAGATCTGACGGCGTCTAAAG 58.545 52.381 36.17 26.32 33.15 1.85
912 2473 1.134367 CCAGATCTGACGGCGTCTAAA 59.866 52.381 36.17 23.08 33.15 1.85
913 2474 0.738975 CCAGATCTGACGGCGTCTAA 59.261 55.000 36.17 25.40 33.15 2.10
914 2475 0.107361 TCCAGATCTGACGGCGTCTA 60.107 55.000 36.17 25.77 33.15 2.59
915 2476 0.965866 TTCCAGATCTGACGGCGTCT 60.966 55.000 36.17 20.05 33.15 4.18
916 2477 0.103208 ATTCCAGATCTGACGGCGTC 59.897 55.000 31.68 31.68 0.00 5.19
917 2478 0.103208 GATTCCAGATCTGACGGCGT 59.897 55.000 24.62 14.65 0.00 5.68
918 2479 0.598680 GGATTCCAGATCTGACGGCG 60.599 60.000 24.62 4.80 0.00 6.46
919 2480 0.465705 TGGATTCCAGATCTGACGGC 59.534 55.000 24.62 10.20 0.00 5.68
920 2481 2.555199 GTTGGATTCCAGATCTGACGG 58.445 52.381 24.62 7.81 33.81 4.79
921 2482 2.196749 CGTTGGATTCCAGATCTGACG 58.803 52.381 24.62 18.57 33.81 4.35
922 2483 2.555199 CCGTTGGATTCCAGATCTGAC 58.445 52.381 24.62 10.98 33.81 3.51
923 2484 1.134401 GCCGTTGGATTCCAGATCTGA 60.134 52.381 24.62 5.34 33.81 3.27
924 2485 1.303309 GCCGTTGGATTCCAGATCTG 58.697 55.000 16.24 16.24 33.81 2.90
925 2486 0.181350 GGCCGTTGGATTCCAGATCT 59.819 55.000 5.36 0.00 33.81 2.75
926 2487 1.160329 CGGCCGTTGGATTCCAGATC 61.160 60.000 19.50 0.64 33.81 2.75
927 2488 1.153168 CGGCCGTTGGATTCCAGAT 60.153 57.895 19.50 0.00 33.81 2.90
928 2489 2.238847 CTCGGCCGTTGGATTCCAGA 62.239 60.000 27.15 0.00 33.81 3.86
929 2490 1.815421 CTCGGCCGTTGGATTCCAG 60.815 63.158 27.15 7.77 33.81 3.86
930 2491 1.832719 TTCTCGGCCGTTGGATTCCA 61.833 55.000 27.15 0.00 0.00 3.53
931 2492 1.078708 TTCTCGGCCGTTGGATTCC 60.079 57.895 27.15 0.00 0.00 3.01
932 2493 0.391263 ACTTCTCGGCCGTTGGATTC 60.391 55.000 27.15 0.00 0.00 2.52
933 2494 0.391263 GACTTCTCGGCCGTTGGATT 60.391 55.000 27.15 8.41 0.00 3.01
934 2495 1.218316 GACTTCTCGGCCGTTGGAT 59.782 57.895 27.15 9.51 0.00 3.41
935 2496 0.609957 TAGACTTCTCGGCCGTTGGA 60.610 55.000 27.15 18.49 0.00 3.53
936 2497 0.460311 ATAGACTTCTCGGCCGTTGG 59.540 55.000 27.15 16.42 0.00 3.77
937 2498 3.253677 AGATATAGACTTCTCGGCCGTTG 59.746 47.826 27.15 19.13 0.00 4.10
938 2499 3.488363 AGATATAGACTTCTCGGCCGTT 58.512 45.455 27.15 5.29 0.00 4.44
939 2500 3.075884 GAGATATAGACTTCTCGGCCGT 58.924 50.000 27.15 4.54 29.96 5.68
940 2501 2.420722 GGAGATATAGACTTCTCGGCCG 59.579 54.545 22.12 22.12 39.42 6.13
941 2502 3.692690 AGGAGATATAGACTTCTCGGCC 58.307 50.000 0.00 0.00 39.42 6.13
942 2503 5.941647 ACTTAGGAGATATAGACTTCTCGGC 59.058 44.000 0.00 0.00 39.42 5.54
943 2504 7.989416 AACTTAGGAGATATAGACTTCTCGG 57.011 40.000 0.00 0.00 39.42 4.63
944 2505 9.672086 CAAAACTTAGGAGATATAGACTTCTCG 57.328 37.037 0.00 0.00 39.42 4.04
945 2506 9.974980 CCAAAACTTAGGAGATATAGACTTCTC 57.025 37.037 0.00 0.00 38.10 2.87
946 2507 8.929487 CCCAAAACTTAGGAGATATAGACTTCT 58.071 37.037 0.00 0.00 0.00 2.85
947 2508 8.706521 ACCCAAAACTTAGGAGATATAGACTTC 58.293 37.037 0.00 0.00 0.00 3.01
948 2509 8.625467 ACCCAAAACTTAGGAGATATAGACTT 57.375 34.615 0.00 0.00 0.00 3.01
949 2510 9.900112 ATACCCAAAACTTAGGAGATATAGACT 57.100 33.333 0.00 0.00 0.00 3.24
951 2512 9.892444 TGATACCCAAAACTTAGGAGATATAGA 57.108 33.333 0.00 0.00 0.00 1.98
952 2513 9.930693 GTGATACCCAAAACTTAGGAGATATAG 57.069 37.037 0.00 0.00 0.00 1.31
953 2514 9.670442 AGTGATACCCAAAACTTAGGAGATATA 57.330 33.333 0.00 0.00 0.00 0.86
954 2515 8.568617 AGTGATACCCAAAACTTAGGAGATAT 57.431 34.615 0.00 0.00 0.00 1.63
955 2516 7.989947 AGTGATACCCAAAACTTAGGAGATA 57.010 36.000 0.00 0.00 0.00 1.98
956 2517 6.893020 AGTGATACCCAAAACTTAGGAGAT 57.107 37.500 0.00 0.00 0.00 2.75
957 2518 6.271391 TCAAGTGATACCCAAAACTTAGGAGA 59.729 38.462 0.00 0.00 31.80 3.71
958 2519 6.472887 TCAAGTGATACCCAAAACTTAGGAG 58.527 40.000 0.00 0.00 31.80 3.69
959 2520 6.442541 TCAAGTGATACCCAAAACTTAGGA 57.557 37.500 0.00 0.00 31.80 2.94
960 2521 7.519032 TTTCAAGTGATACCCAAAACTTAGG 57.481 36.000 0.00 0.00 31.80 2.69
961 2522 9.981114 AAATTTCAAGTGATACCCAAAACTTAG 57.019 29.630 0.00 0.00 31.80 2.18
962 2523 9.974980 GAAATTTCAAGTGATACCCAAAACTTA 57.025 29.630 13.40 0.00 31.80 2.24
963 2524 7.931407 GGAAATTTCAAGTGATACCCAAAACTT 59.069 33.333 19.49 0.00 33.20 2.66
964 2525 7.441836 GGAAATTTCAAGTGATACCCAAAACT 58.558 34.615 19.49 0.00 0.00 2.66
965 2526 6.649141 GGGAAATTTCAAGTGATACCCAAAAC 59.351 38.462 19.49 0.00 35.41 2.43
966 2527 6.239743 GGGGAAATTTCAAGTGATACCCAAAA 60.240 38.462 19.49 0.00 36.85 2.44
967 2528 5.247337 GGGGAAATTTCAAGTGATACCCAAA 59.753 40.000 19.49 0.00 36.85 3.28
968 2529 4.775253 GGGGAAATTTCAAGTGATACCCAA 59.225 41.667 19.49 0.00 36.85 4.12
969 2530 4.349365 GGGGAAATTTCAAGTGATACCCA 58.651 43.478 19.49 0.00 36.85 4.51
970 2531 3.704566 GGGGGAAATTTCAAGTGATACCC 59.295 47.826 19.49 16.14 0.00 3.69
1505 3071 2.997315 CTCCAGGGCGTGAGGACA 60.997 66.667 9.09 0.00 0.00 4.02
1652 3218 0.745128 GCAGCAGAGAAGAGCAGCAT 60.745 55.000 0.00 0.00 42.04 3.79
1681 3247 2.292828 TCAGCAAAAAGAAGAGGGGG 57.707 50.000 0.00 0.00 0.00 5.40
1702 3268 5.005779 CGCATACCAAGAATTCACAGAGTAC 59.994 44.000 8.44 0.00 0.00 2.73
1784 3350 1.206132 ACGACACGCCATTCAGGATTA 59.794 47.619 0.00 0.00 41.22 1.75
1868 3434 8.589629 CAAATTCAGAAATGCAAATGCTAGTAC 58.410 33.333 6.97 0.00 42.66 2.73
1912 3478 8.617761 AGAATCGACTAGACTAATTCGTTTTC 57.382 34.615 0.00 13.40 32.82 2.29
2303 4379 4.722700 AAGCGCACCGGCAGGAAT 62.723 61.111 10.86 0.00 41.24 3.01
2499 4575 4.017499 ACTGGCCCTAAACCTCAATACAAT 60.017 41.667 0.00 0.00 0.00 2.71
2502 4578 3.646736 ACTGGCCCTAAACCTCAATAC 57.353 47.619 0.00 0.00 0.00 1.89
2537 4613 1.065551 GCTTATTTTGGCAGCTACCCG 59.934 52.381 0.00 0.00 0.00 5.28
2639 4715 8.891720 ACTCCTAGTAACTAAGAGTACATTTCG 58.108 37.037 3.27 0.00 36.38 3.46
2751 4904 5.748670 TGTATCCAACAGCCAGTTAGTTA 57.251 39.130 0.00 0.00 38.74 2.24
2752 4905 4.634012 TGTATCCAACAGCCAGTTAGTT 57.366 40.909 0.00 0.00 38.74 2.24
2905 5059 0.246635 AGCACACTAAGCACCTACGG 59.753 55.000 0.00 0.00 0.00 4.02
2906 5060 1.726791 CAAGCACACTAAGCACCTACG 59.273 52.381 0.00 0.00 0.00 3.51
2953 5108 3.153919 GCACCCACAAAAGAACCATCTA 58.846 45.455 0.00 0.00 33.77 1.98
3411 5572 7.066525 TGTTTTCTCCGATATATCACCCAAAAC 59.933 37.037 20.45 20.45 32.91 2.43
3415 5576 5.880164 TGTTTTCTCCGATATATCACCCA 57.120 39.130 13.11 0.00 0.00 4.51
3450 5611 8.347004 TGCATTTCTGTACAAGAATATGGAAA 57.653 30.769 0.00 1.15 44.46 3.13
3451 5612 7.936496 TGCATTTCTGTACAAGAATATGGAA 57.064 32.000 0.00 0.00 44.46 3.53
3452 5613 8.523915 AATGCATTTCTGTACAAGAATATGGA 57.476 30.769 5.99 10.34 44.46 3.41
3495 5982 3.258971 AGGCTAGAGCATTGACTTCAC 57.741 47.619 3.54 0.00 44.36 3.18
3519 6006 1.822371 ACGTTTGGCAACCTCAAGTTT 59.178 42.857 0.00 0.00 36.18 2.66
3522 6009 2.459934 GAAACGTTTGGCAACCTCAAG 58.540 47.619 20.10 0.00 0.00 3.02
3573 6061 1.884235 AGAACAAAGTCCTGGAAGCG 58.116 50.000 0.00 0.00 0.00 4.68
3574 6062 4.452795 GTCTTAGAACAAAGTCCTGGAAGC 59.547 45.833 0.00 0.00 0.00 3.86
3575 6063 4.686554 CGTCTTAGAACAAAGTCCTGGAAG 59.313 45.833 0.00 0.00 0.00 3.46
3576 6064 4.502604 CCGTCTTAGAACAAAGTCCTGGAA 60.503 45.833 0.00 0.00 0.00 3.53
3577 6065 3.006537 CCGTCTTAGAACAAAGTCCTGGA 59.993 47.826 0.00 0.00 0.00 3.86
3578 6066 3.326747 CCGTCTTAGAACAAAGTCCTGG 58.673 50.000 0.00 0.00 0.00 4.45
3579 6067 3.006537 TCCCGTCTTAGAACAAAGTCCTG 59.993 47.826 0.00 0.00 0.00 3.86
3580 6068 3.236896 TCCCGTCTTAGAACAAAGTCCT 58.763 45.455 0.00 0.00 0.00 3.85
3582 6070 5.617087 GCAAATCCCGTCTTAGAACAAAGTC 60.617 44.000 0.00 0.00 0.00 3.01
3584 6072 4.455877 AGCAAATCCCGTCTTAGAACAAAG 59.544 41.667 0.00 0.00 0.00 2.77
3585 6073 4.394729 AGCAAATCCCGTCTTAGAACAAA 58.605 39.130 0.00 0.00 0.00 2.83
3611 6118 2.870175 AGAGTATCCCTCCATCGTCAG 58.130 52.381 0.00 0.00 41.47 3.51
3644 6151 3.899360 TGGATACCTTAATACCGAGTGGG 59.101 47.826 0.00 0.00 40.75 4.61
3645 6152 5.245301 TGATGGATACCTTAATACCGAGTGG 59.755 44.000 0.00 0.00 42.84 4.00
3650 6220 7.492669 CAGCTAATGATGGATACCTTAATACCG 59.507 40.741 0.00 0.00 0.00 4.02
3653 6223 9.326489 AGTCAGCTAATGATGGATACCTTAATA 57.674 33.333 0.00 0.00 40.92 0.98
3672 6242 8.563732 CATATCACGCTATATGTATAGTCAGCT 58.436 37.037 8.42 0.00 38.30 4.24
3673 6243 8.560374 TCATATCACGCTATATGTATAGTCAGC 58.440 37.037 14.07 0.00 39.71 4.26
3745 6378 8.768397 TCACAATACCAAGTGATCCTTATTACT 58.232 33.333 0.00 0.00 39.65 2.24
3757 6390 4.761739 ACTGGTTGATCACAATACCAAGTG 59.238 41.667 15.98 8.77 36.75 3.16
3796 6430 5.723672 ACTTCAGGTGAGACTTTTATCGA 57.276 39.130 0.00 0.00 0.00 3.59
3814 6448 5.520022 TCCGCGATACTTAACAAAACTTC 57.480 39.130 8.23 0.00 0.00 3.01
3815 6449 4.142966 GCTCCGCGATACTTAACAAAACTT 60.143 41.667 8.23 0.00 0.00 2.66
3816 6450 3.370061 GCTCCGCGATACTTAACAAAACT 59.630 43.478 8.23 0.00 0.00 2.66
3835 6469 1.194772 GCGTACACAGTTCCTTTGCTC 59.805 52.381 0.00 0.00 0.00 4.26
3859 6493 3.124636 TCTTTTATCGAGCGAAACTTGGC 59.875 43.478 0.00 0.00 0.00 4.52
3932 6566 1.453155 ACTAAGCATTTGACCCTGCG 58.547 50.000 0.00 0.00 43.17 5.18
3950 6584 8.758633 TTGCTCTCTATCAAACTACTAACAAC 57.241 34.615 0.00 0.00 0.00 3.32
3951 6585 8.035394 CCTTGCTCTCTATCAAACTACTAACAA 58.965 37.037 0.00 0.00 0.00 2.83
3965 6599 4.348486 TCAAGTGTCTCCTTGCTCTCTAT 58.652 43.478 0.00 0.00 41.29 1.98
3972 6606 5.967088 TCTAATACTCAAGTGTCTCCTTGC 58.033 41.667 0.00 0.00 41.29 4.01
3974 6608 8.097662 CCTTTTCTAATACTCAAGTGTCTCCTT 58.902 37.037 0.00 0.00 0.00 3.36
3983 6617 4.332819 CCGGTGCCTTTTCTAATACTCAAG 59.667 45.833 0.00 0.00 0.00 3.02
3985 6619 3.516300 TCCGGTGCCTTTTCTAATACTCA 59.484 43.478 0.00 0.00 0.00 3.41
3992 6626 2.178912 CACTTCCGGTGCCTTTTCTA 57.821 50.000 0.00 0.00 39.22 2.10
4017 6651 5.383958 TCCCGAAACATTTTCGAAAATACG 58.616 37.500 30.14 27.56 43.97 3.06
4041 6675 5.241728 GCATTACTTGGACCTTCTTGAAACT 59.758 40.000 0.00 0.00 0.00 2.66
4057 6691 6.423604 CCTTTGAAACATTTTCGGCATTACTT 59.576 34.615 0.00 0.00 0.00 2.24
4066 6700 4.207019 GTGAGCACCTTTGAAACATTTTCG 59.793 41.667 0.00 0.00 0.00 3.46
4078 6712 3.209410 CAAGACTTCTGTGAGCACCTTT 58.791 45.455 0.00 0.00 0.00 3.11
4089 6723 1.151668 CCACGCTTCCAAGACTTCTG 58.848 55.000 0.00 0.00 0.00 3.02
4090 6724 1.048601 TCCACGCTTCCAAGACTTCT 58.951 50.000 0.00 0.00 0.00 2.85
4093 6727 1.048601 TCTTCCACGCTTCCAAGACT 58.951 50.000 0.00 0.00 0.00 3.24
4095 6729 2.615493 GGAATCTTCCACGCTTCCAAGA 60.615 50.000 4.05 0.00 46.76 3.02
4118 6754 1.607467 GCAGCCCAATTGGACCACT 60.607 57.895 26.60 13.86 37.39 4.00
4172 6808 0.394352 AATAAGCTGAAGGGGGTGCG 60.394 55.000 0.00 0.00 0.00 5.34
4175 6811 1.495148 GCCTAATAAGCTGAAGGGGGT 59.505 52.381 0.00 0.00 0.00 4.95
4192 6829 1.377994 CAGCTCCACTTCCTTGCCT 59.622 57.895 0.00 0.00 0.00 4.75
4213 6850 4.965532 CCCTAGAGATCCTTTCCTTTCTCA 59.034 45.833 0.00 0.00 37.63 3.27
4240 6877 0.955428 TTCCATGTGCAACGAGGAGC 60.955 55.000 0.00 0.00 42.21 4.70
4247 6884 1.586154 CCGTCCCTTCCATGTGCAAC 61.586 60.000 0.00 0.00 37.35 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.